# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- SPOB_a PF14689.6 BAM38534.1 - 0.00031 20.4 0.1 0.00091 18.9 0.1 1.8 1 0 0 1 1 1 1 Sensor_kinase_SpoOB-type, alpha-helical domain PDZ_3 PF17815.1 BAM38534.1 - 0.0092 15.9 0.1 0.16 11.8 0.0 2.7 2 0 0 2 2 2 1 PDZ domain IF4E PF01652.18 BAM38534.1 - 0.098 12.5 0.6 0.29 10.9 0.2 2.0 2 0 0 2 2 2 0 Eukaryotic initiation factor 4E ZU5 PF00791.20 BAM38534.1 - 0.17 12.3 0.0 0.92 9.9 0.0 2.3 2 0 0 2 2 2 0 ZU5 domain ABC_tran PF00005.27 BAM38535.1 - 5.3e-31 108.0 0.0 9.1e-16 58.6 0.0 2.7 2 1 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 BAM38535.1 - 2.3e-07 30.8 25.4 2.3e-07 30.8 25.4 3.8 4 0 0 4 4 3 1 ABC transporter transmembrane region RsgA_GTPase PF03193.16 BAM38535.1 - 7.4e-07 29.2 0.8 0.015 15.2 0.2 2.5 2 0 0 2 2 2 2 RsgA GTPase Zeta_toxin PF06414.12 BAM38535.1 - 2.2e-05 23.9 0.3 0.11 11.7 0.1 2.4 2 0 0 2 2 2 2 Zeta toxin AAA_29 PF13555.6 BAM38535.1 - 0.00012 21.7 0.9 0.4 10.4 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain MeaB PF03308.16 BAM38535.1 - 0.00013 21.1 0.1 0.11 11.4 0.1 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB T2SSE PF00437.20 BAM38535.1 - 0.0012 18.0 0.1 0.15 11.1 0.0 2.2 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_30 PF13604.6 BAM38535.1 - 0.0015 18.2 0.5 0.066 12.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 BAM38535.1 - 0.0062 16.6 0.1 1.1 9.3 0.0 2.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_16 PF13191.6 BAM38535.1 - 0.007 16.8 0.0 0.76 10.1 0.0 2.3 2 0 0 2 2 2 1 AAA ATPase domain ATP_bind_1 PF03029.17 BAM38535.1 - 0.0079 16.0 0.8 3.6 7.3 0.1 2.8 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_21 PF13304.6 BAM38535.1 - 0.0087 15.9 0.1 1.9 8.2 0.1 2.9 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 BAM38535.1 - 0.02 15.4 1.8 1.5 9.3 0.1 2.6 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 BAM38535.1 - 0.035 14.1 0.9 8.6 6.4 0.1 2.6 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_10 PF12846.7 BAM38535.1 - 0.047 12.6 0.2 1.3 7.9 0.1 2.2 2 0 0 2 2 2 0 AAA-like domain TrwB_AAD_bind PF10412.9 BAM38535.1 - 0.063 12.2 1.3 2.9 6.7 0.1 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain AAA_25 PF13481.6 BAM38535.1 - 0.12 12.0 0.1 10 5.7 0.0 2.4 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 BAM38535.1 - 0.12 11.7 0.5 4.7 6.5 0.0 2.5 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_22 PF13401.6 BAM38535.1 - 0.15 12.4 0.3 16 5.7 0.0 2.7 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 BAM38535.1 - 0.15 12.2 0.2 26 5.0 0.0 2.5 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 BAM38535.1 - 0.24 11.0 2.6 0.15 11.7 0.1 1.8 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain MobB PF03205.14 BAM38535.1 - 0.25 11.2 2.0 1.9 8.4 0.3 2.5 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B NB-ARC PF00931.22 BAM38535.1 - 0.29 10.3 3.2 0.16 11.1 0.3 2.1 3 0 0 3 3 3 0 NB-ARC domain SMC_N PF02463.19 BAM38535.1 - 0.33 10.3 4.1 1.1 8.6 0.2 3.0 3 0 0 3 3 3 0 RecF/RecN/SMC N terminal domain DUF87 PF01935.17 BAM38535.1 - 0.44 10.6 5.5 2.3 8.3 0.4 2.5 2 0 0 2 2 2 0 Helicase HerA, central domain HILPDA PF15220.6 BAM38535.1 - 0.49 10.6 3.0 1.8 8.7 3.0 2.0 1 0 0 1 1 1 0 Hypoxia-inducible lipid droplet-associated cobW PF02492.19 BAM38535.1 - 0.56 9.8 5.7 3 7.4 0.2 2.7 3 0 0 3 3 2 0 CobW/HypB/UreG, nucleotide-binding domain Dynamin_N PF00350.23 BAM38535.1 - 0.61 10.1 3.3 0.87 9.6 0.6 2.3 2 0 0 2 2 2 0 Dynamin family Inhibitor_I67 PF11405.8 BAM38536.1 - 0.019 15.2 0.2 0.047 14.0 0.2 1.6 1 0 0 1 1 1 0 Bromelain inhibitor VI zf-RRPl_C4 PF17026.5 BAM38536.1 - 0.22 11.6 3.9 0.46 10.6 3.9 1.4 1 0 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type ABC_tran PF00005.27 BAM38537.1 - 1e-32 113.5 0.0 2e-17 64.0 0.0 2.6 2 1 0 2 2 2 2 ABC transporter MeaB PF03308.16 BAM38537.1 - 5e-06 25.7 0.2 0.012 14.6 0.2 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB RsgA_GTPase PF03193.16 BAM38537.1 - 2.3e-05 24.3 0.5 0.12 12.2 0.2 2.4 2 0 0 2 2 2 2 RsgA GTPase AAA_29 PF13555.6 BAM38537.1 - 4.8e-05 23.0 1.9 0.18 11.6 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 BAM38537.1 - 6.5e-05 23.4 0.1 0.024 15.0 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain Zeta_toxin PF06414.12 BAM38537.1 - 0.00013 21.3 0.3 0.19 11.0 0.0 2.3 2 0 0 2 2 2 2 Zeta toxin T2SSE PF00437.20 BAM38537.1 - 0.0012 18.0 0.1 0.67 9.0 0.0 2.3 2 0 0 2 2 2 2 Type II/IV secretion system protein AAA_30 PF13604.6 BAM38537.1 - 0.0015 18.3 0.5 0.045 13.5 0.0 2.2 2 0 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.18 BAM38537.1 - 0.0017 17.7 0.2 0.55 9.5 0.0 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family MMR_HSR1 PF01926.23 BAM38537.1 - 0.0064 16.6 0.8 0.4 10.8 0.2 2.6 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_22 PF13401.6 BAM38537.1 - 0.0068 16.7 0.7 1.7 8.9 0.0 2.9 2 0 0 2 2 2 1 AAA domain DUF87 PF01935.17 BAM38537.1 - 0.0098 16.0 10.2 0.11 12.5 0.5 3.5 3 0 0 3 3 3 1 Helicase HerA, central domain AAA_23 PF13476.6 BAM38537.1 - 0.011 16.3 4.3 0.12 12.9 0.3 2.5 2 0 0 2 2 2 0 AAA domain SMC_N PF02463.19 BAM38537.1 - 0.014 14.9 2.1 0.23 10.9 0.3 2.6 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 BAM38537.1 - 0.03 14.1 1.7 0.41 10.4 0.4 2.7 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system MobB PF03205.14 BAM38537.1 - 0.042 13.8 2.3 0.73 9.7 0.4 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.6 BAM38537.1 - 0.07 13.7 0.0 1.7 9.2 0.0 2.6 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 BAM38537.1 - 0.079 12.5 0.0 6.7 6.2 0.0 2.3 2 0 0 2 2 2 0 AAA domain TrwB_AAD_bind PF10412.9 BAM38537.1 - 0.09 11.7 1.8 2.5 6.9 0.1 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain DUF815 PF05673.13 BAM38537.1 - 0.1 11.8 1.5 0.81 8.8 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF815) ATPase_2 PF01637.18 BAM38537.1 - 0.12 12.3 3.2 7.2 6.4 0.0 3.0 3 0 0 3 3 3 0 ATPase domain predominantly from Archaea AAA_10 PF12846.7 BAM38537.1 - 0.13 11.1 0.6 2.1 7.2 0.1 2.2 2 0 0 2 2 2 0 AAA-like domain AAA_24 PF13479.6 BAM38537.1 - 0.17 11.6 0.1 23 4.7 0.0 2.4 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 BAM38537.1 - 0.23 11.4 1.5 4.8 7.1 0.1 2.6 2 0 0 2 2 2 0 NACHT domain cobW PF02492.19 BAM38537.1 - 0.28 10.7 7.4 1.2 8.7 0.2 2.7 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain NB-ARC PF00931.22 BAM38537.1 - 0.35 10.0 2.3 0.35 10.0 0.2 1.9 2 0 0 2 2 2 0 NB-ARC domain SRP54 PF00448.22 BAM38537.1 - 0.37 10.4 1.2 0.44 10.1 0.1 1.7 2 0 0 2 2 1 0 SRP54-type protein, GTPase domain ATP_bind_1 PF03029.17 BAM38537.1 - 0.5 10.1 5.5 10 5.8 0.4 3.0 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein NTPase_1 PF03266.15 BAM38537.1 - 0.85 9.5 2.6 16 5.4 0.2 2.5 2 0 0 2 2 2 0 NTPase ABC_tran PF00005.27 BAM38539.1 - 8.7e-33 113.7 0.0 2.6e-17 63.6 0.0 2.5 2 0 0 2 2 2 2 ABC transporter RsgA_GTPase PF03193.16 BAM38539.1 - 5.5e-06 26.4 0.2 0.04 13.8 0.0 2.6 2 0 0 2 2 2 2 RsgA GTPase AAA_29 PF13555.6 BAM38539.1 - 6.9e-05 22.5 1.8 0.18 11.5 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain Zeta_toxin PF06414.12 BAM38539.1 - 0.00014 21.2 0.3 0.23 10.7 0.1 2.4 2 0 0 2 2 2 2 Zeta toxin MeaB PF03308.16 BAM38539.1 - 0.00016 20.7 0.1 0.11 11.4 0.0 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 BAM38539.1 - 0.00066 20.1 0.2 0.17 12.2 0.0 2.3 2 0 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 BAM38539.1 - 0.00096 19.7 1.5 0.12 12.9 0.0 2.9 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 BAM38539.1 - 0.0016 18.2 1.1 0.03 14.0 0.1 2.2 2 0 0 2 2 2 1 AAA domain T2SSE PF00437.20 BAM38539.1 - 0.002 17.2 0.2 1.1 8.3 0.0 2.3 2 0 0 2 2 2 2 Type II/IV secretion system protein FtsK_SpoIIIE PF01580.18 BAM38539.1 - 0.0023 17.3 0.1 0.56 9.5 0.0 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family MMR_HSR1 PF01926.23 BAM38539.1 - 0.0042 17.1 0.6 0.35 11.0 0.1 2.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_22 PF13401.6 BAM38539.1 - 0.0082 16.4 0.8 1.5 9.1 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_21 PF13304.6 BAM38539.1 - 0.0086 15.9 1.2 0.26 11.0 0.1 3.0 3 0 0 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAM38539.1 - 0.024 14.1 2.5 0.24 10.8 0.3 2.9 3 0 0 3 3 2 0 RecF/RecN/SMC N terminal domain NB-ARC PF00931.22 BAM38539.1 - 0.065 12.4 1.8 0.091 11.9 0.1 2.0 2 0 0 2 2 2 0 NB-ARC domain DUF87 PF01935.17 BAM38539.1 - 0.067 13.3 6.2 0.6 10.2 0.7 2.5 2 0 0 2 2 2 0 Helicase HerA, central domain MobB PF03205.14 BAM38539.1 - 0.1 12.5 2.7 1.4 8.9 0.3 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.6 BAM38539.1 - 0.12 13.0 0.1 2.9 8.5 0.1 2.6 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 BAM38539.1 - 0.12 12.1 4.2 3 7.6 0.1 3.0 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein AAA_25 PF13481.6 BAM38539.1 - 0.16 11.5 0.2 10 5.7 0.0 2.3 2 0 0 2 2 2 0 AAA domain TrwB_AAD_bind PF10412.9 BAM38539.1 - 0.18 10.7 1.7 2.2 7.1 0.0 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain DUF815 PF05673.13 BAM38539.1 - 0.19 10.8 0.5 1.6 7.9 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_33 PF13671.6 BAM38539.1 - 0.23 11.6 0.1 19 5.4 0.0 2.4 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 BAM38539.1 - 0.42 10.6 1.6 15 5.6 0.2 2.6 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 BAM38539.1 - 0.47 10.3 1.5 12 5.8 0.1 2.7 3 0 0 3 3 2 0 NACHT domain cobW PF02492.19 BAM38539.1 - 0.55 9.8 8.4 1 8.9 0.3 2.7 3 0 0 3 3 2 0 CobW/HypB/UreG, nucleotide-binding domain DcpS_C PF11969.8 BAM38541.1 - 1.9e-20 73.4 0.1 2.7e-20 72.9 0.1 1.2 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding HIT PF01230.23 BAM38541.1 - 2.7e-20 72.9 0.0 3.8e-20 72.4 0.0 1.2 1 0 0 1 1 1 1 HIT domain RNase_PH PF01138.21 BAM38542.1 - 4.9e-19 69.2 0.0 7.6e-19 68.5 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 BAM38542.1 - 0.11 12.5 0.0 0.24 11.5 0.0 1.6 1 0 0 1 1 1 0 3' exoribonuclease family, domain 2 DUF5494 PF17598.2 BAM38543.1 - 0.039 14.1 0.0 0.17 12.0 0.0 2.1 1 0 0 1 1 1 0 Family of unknown function (DUF5494) PI3K_1B_p101 PF10486.9 BAM38543.1 - 0.065 11.0 5.2 0.11 10.3 5.2 1.2 1 0 0 1 1 1 0 Phosphoinositide 3-kinase gamma adapter protein p101 subunit EloA-BP1 PF15870.5 BAM38543.1 - 0.8 9.9 6.9 2.3 8.5 6.9 1.7 1 0 0 1 1 1 0 ElonginA binding-protein 1 RIBIOP_C PF04950.12 BAM38544.1 - 2.4e-97 325.9 0.0 3.8e-97 325.2 0.0 1.3 1 0 0 1 1 1 1 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal AARP2CN PF08142.12 BAM38544.1 - 5.2e-11 42.5 0.0 1.5e-10 41.0 0.0 1.8 1 0 0 1 1 1 1 AARP2CN (NUC121) domain Sortilin-Vps10 PF15902.5 BAM38545.1 - 3e-104 349.3 5.0 4e-103 345.6 3.7 2.4 1 1 0 1 1 1 1 Sortilin, neurotensin receptor 3, Sortilin_C PF15901.5 BAM38545.1 - 4.8e-38 131.2 3.6 8.2e-38 130.4 3.6 1.4 1 0 0 1 1 1 1 Sortilin, neurotensin receptor 3, C-terminal BNR PF02012.20 BAM38545.1 - 0.01 15.7 10.2 0.86 9.9 0.0 6.6 6 0 0 6 6 6 0 BNR/Asp-box repeat UCR_UQCRX_QCR9 PF05365.12 BAM38545.1 - 0.035 14.0 0.2 0.17 11.9 0.0 2.3 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like preSET_CXC PF18264.1 BAM38545.1 - 7 7.2 6.4 11 6.6 2.4 2.4 2 0 0 2 2 2 0 CXC domain PA14 PF07691.12 BAM38546.1 - 4.1e-22 78.6 0.0 8.1e-22 77.6 0.0 1.5 1 0 0 1 1 1 1 PA14 domain fn2 PF00040.19 BAM38546.1 - 0.0016 18.6 1.3 0.0051 17.1 1.3 1.9 1 0 0 1 1 1 1 Fibronectin type II domain GLEYA PF10528.9 BAM38546.1 - 0.053 13.9 0.0 0.18 12.3 0.0 2.0 1 1 0 1 1 1 0 GLEYA domain cwf18 PF08315.12 BAM38547.1 - 3.5e-17 63.3 0.3 5.1e-17 62.8 0.3 1.2 1 0 0 1 1 1 1 cwf18 pre-mRNA splicing factor GerE PF00196.19 BAM38547.1 - 0.11 12.1 0.0 0.19 11.3 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family DASH_Duo1 PF08651.10 BAM38548.1 - 0.5 10.2 4.5 3.9 7.3 0.0 3.6 4 0 0 4 4 4 0 DASH complex subunit Duo1 NpwBP PF12622.7 BAM38549.1 - 0.12 13.2 0.0 0.26 12.1 0.0 1.7 1 0 0 1 1 1 0 mRNA biogenesis factor Aminotran_5 PF00266.19 BAM38550.1 - 3.1e-83 279.8 0.0 4.6e-83 279.2 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V DegT_DnrJ_EryC1 PF01041.17 BAM38550.1 - 8.5e-06 25.3 0.0 1.7e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 BAM38550.1 - 0.00022 20.6 0.0 0.00044 19.6 0.0 1.4 1 0 0 1 1 1 1 Beta-eliminating lyase Pyridoxal_deC PF00282.19 BAM38550.1 - 0.039 12.7 0.0 0.066 11.9 0.0 1.3 1 0 0 1 1 1 0 Pyridoxal-dependent decarboxylase conserved domain WSD PF15613.6 BAM38550.1 - 0.042 14.3 0.0 0.042 14.3 0.0 4.4 4 0 0 4 4 4 0 Williams-Beuren syndrome DDT (WSD), D-TOX E motif DUF1378 PF07125.11 BAM38550.1 - 1.7 8.9 3.8 0.99 9.6 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1378) CS PF04969.16 BAM38551.1 - 1.2e-08 35.8 0.4 1.2e-08 35.8 0.4 2.1 2 0 0 2 2 2 1 CS domain HrcA PF01628.21 BAM38551.1 - 0.64 9.9 2.6 1.5 8.7 2.6 1.5 1 1 0 1 1 1 0 HrcA protein C terminal domain Peptidase_A25 PF03418.14 BAM38553.1 - 0.016 14.1 0.9 0.021 13.7 0.9 1.1 1 0 0 1 1 1 0 Germination protease AAA_34 PF13872.6 BAM38553.1 - 0.021 13.7 0.8 0.023 13.6 0.8 1.1 1 0 0 1 1 1 0 P-loop containing NTP hydrolase pore-1 AATF-Che1 PF13339.6 BAM38553.1 - 0.93 10.2 8.4 4.1 8.1 3.3 2.1 1 1 1 2 2 2 0 Apoptosis antagonizing transcription factor Dus PF01207.17 BAM38554.1 - 1.6e-53 181.8 0.0 2.6e-53 181.1 0.0 1.3 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) DUF2102 PF09875.9 BAM38554.1 - 0.099 12.4 0.0 0.2 11.4 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2102) RNA_pol_A_bac PF01000.26 BAM38555.1 - 7.5e-23 81.0 0.0 1.9e-22 79.7 0.0 1.7 2 0 0 2 2 2 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 BAM38555.1 - 1.1e-17 63.3 0.0 1.4e-17 62.9 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Fer4_21 PF14697.6 BAM38555.1 - 0.027 14.6 0.5 0.027 14.6 0.5 2.2 2 0 0 2 2 2 0 4Fe-4S dicluster domain 2OG-FeII_Oxy_2 PF13532.6 BAM38556.1 - 1e-21 78.0 0.0 1.3e-21 77.7 0.0 1.2 1 0 0 1 1 1 1 2OG-Fe(II) oxygenase superfamily PMC2NT PF08066.12 BAM38556.1 - 0.0031 18.1 0.0 0.16 12.6 0.0 2.4 2 0 0 2 2 2 1 PMC2NT (NUC016) domain DUF3305 PF11749.8 BAM38556.1 - 0.14 12.2 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3305) GatB_N PF02934.15 BAM38557.1 - 2.2e-51 174.9 0.1 2.4e-46 158.3 0.0 2.2 2 0 0 2 2 2 2 GatB/GatE catalytic domain GatB_Yqey PF02637.18 BAM38557.1 - 7e-05 22.8 0.0 0.00013 21.8 0.0 1.5 1 0 0 1 1 1 1 GatB domain DUF3795 PF12675.7 BAM38557.1 - 0.0064 16.9 0.1 0.021 15.2 0.1 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF3795) RTBV_P12 PF06361.11 BAM38559.1 - 0.26 11.7 1.7 0.97 9.9 0.0 2.9 3 1 0 3 3 3 0 Rice tungro bacilliform virus P12 protein DnaJ_C PF01556.18 BAM38560.1 - 2.7e-36 124.9 0.6 3.6e-36 124.5 0.6 1.1 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 BAM38560.1 - 2.5e-23 82.0 1.6 4.3e-23 81.2 1.6 1.4 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 BAM38560.1 - 0.0015 18.8 6.5 0.0036 17.6 6.5 1.6 1 0 0 1 1 1 1 DnaJ central domain TB PF00683.17 BAM38560.1 - 0.052 13.3 1.3 0.13 12.0 1.3 1.6 1 0 0 1 1 1 0 TB domain ORC2 PF04084.14 BAM38561.1 - 1.5e-17 63.6 0.9 2.3e-17 62.9 0.9 1.3 1 0 0 1 1 1 1 Origin recognition complex subunit 2 CRISPR_Cas9_WED PF18061.1 BAM38561.1 - 0.024 14.7 3.6 2.3 8.3 0.0 3.5 3 1 1 4 4 4 0 CRISPR-Cas9 WED domain CAF1 PF04857.20 BAM38561.1 - 0.043 13.0 0.8 0.066 12.4 0.8 1.5 1 1 0 1 1 1 0 CAF1 family ribonuclease TMEM210 PF15195.6 BAM38561.1 - 0.19 12.2 0.0 31 5.0 0.0 2.3 2 0 0 2 2 2 0 TMEM210 family PAP_central PF04928.17 BAM38562.1 - 2.3e-93 311.7 0.1 3e-93 311.4 0.1 1.1 1 0 0 1 1 1 1 Poly(A) polymerase central domain PAP_RNA-bind PF04926.15 BAM38562.1 - 1.3e-17 64.0 3.2 9.8e-11 41.6 0.3 2.4 1 1 1 2 2 2 2 Poly(A) polymerase predicted RNA binding domain NTP_transf_2 PF01909.23 BAM38562.1 - 1.9e-06 28.1 0.0 5e-06 26.7 0.0 1.7 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 BAM38562.1 - 0.0047 17.0 0.3 0.059 13.5 0.0 2.7 3 0 0 3 3 3 1 Polymerase beta, Nucleotidyltransferase Nrap_D2 PF17403.2 BAM38562.1 - 0.022 14.6 0.2 0.072 12.9 0.2 1.9 1 1 0 1 1 1 0 Nrap protein PAP/OAS-like domain DUF4269 PF14091.6 BAM38562.1 - 0.14 12.4 0.2 0.59 10.4 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4269) Brix PF04427.18 BAM38564.1 - 1.9e-33 116.2 0.4 2.5e-33 115.8 0.4 1.2 1 0 0 1 1 1 1 Brix domain Exo5 PF09810.9 BAM38565.1 - 4.4e-46 158.1 11.2 6.5e-31 108.1 5.6 3.3 1 1 2 3 3 3 3 Exonuclease V - a 5' deoxyribonuclease PDDEXK_1 PF12705.7 BAM38565.1 - 1.5e-05 25.0 0.1 2.2e-05 24.5 0.1 1.3 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily RNase_HII PF01351.18 BAM38566.1 - 1.5e-51 175.1 0.0 1.7e-51 174.9 0.0 1.0 1 0 0 1 1 1 1 Ribonuclease HII AKAP7_NLS PF10469.9 BAM38567.1 - 4.6e-08 33.2 0.4 3.6e-07 30.3 0.1 2.1 2 0 0 2 2 2 1 AKAP7 2'5' RNA ligase-like domain LigT_PEase PF02834.16 BAM38567.1 - 0.14 12.3 0.0 1.1 9.5 0.0 2.3 2 0 0 2 2 2 0 LigT like Phosphoesterase Hexokinase_1 PF00349.21 BAM38568.1 - 3.1e-52 177.4 0.0 4e-52 177.0 0.0 1.1 1 0 0 1 1 1 1 Hexokinase Hexokinase_2 PF03727.16 BAM38568.1 - 9.6e-48 162.7 0.0 1.3e-47 162.2 0.0 1.2 1 0 0 1 1 1 1 Hexokinase Hexokinase_1 PF00349.21 BAM38570.1 - 4.6e-49 167.0 0.0 5.8e-49 166.7 0.0 1.1 1 0 0 1 1 1 1 Hexokinase Hexokinase_2 PF03727.16 BAM38570.1 - 1.4e-47 162.1 0.0 2e-47 161.7 0.0 1.2 1 0 0 1 1 1 1 Hexokinase DUF3404 PF11884.8 BAM38570.1 - 0.2 10.8 0.0 0.31 10.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3404) Hexokinase_1 PF00349.21 BAM38572.1 - 8.5e-50 169.4 0.0 1.1e-49 169.1 0.0 1.1 1 0 0 1 1 1 1 Hexokinase Hexokinase_2 PF03727.16 BAM38572.1 - 7.3e-45 153.3 0.0 1e-44 152.8 0.0 1.2 1 0 0 1 1 1 1 Hexokinase Surp PF01805.20 BAM38573.1 - 4.7e-05 23.3 0.7 8.6e-05 22.5 0.2 1.6 1 1 1 2 2 2 1 Surp module CPW_WPC PF09717.10 BAM38574.1 - 1.9e-09 38.3 0.4 3.9e-09 37.3 0.4 1.5 1 0 0 1 1 1 1 Plasmodium falciparum domain of unknown function (CPW_WPC) Nrap_D2 PF17403.2 BAM38575.1 - 0.0041 16.9 0.9 0.0086 15.8 0.9 1.5 1 0 0 1 1 1 1 Nrap protein PAP/OAS-like domain Kelch_4 PF13418.6 BAM38576.1 - 2e-33 114.2 19.3 1.9e-07 31.0 0.7 6.4 6 0 0 6 6 6 6 Galactose oxidase, central domain Kelch_5 PF13854.6 BAM38576.1 - 1.7e-23 82.1 18.1 9.4e-06 25.5 0.1 6.5 6 0 0 6 6 6 6 Kelch motif Kelch_1 PF01344.25 BAM38576.1 - 3e-22 77.9 14.7 3.1e-08 33.1 0.1 5.2 5 0 0 5 5 5 4 Kelch motif Kelch_6 PF13964.6 BAM38576.1 - 5.4e-21 74.1 17.6 1e-05 25.6 0.2 6.5 5 1 1 6 6 6 5 Kelch motif Kelch_2 PF07646.15 BAM38576.1 - 2e-17 62.4 18.2 0.00012 21.9 0.1 6.1 6 0 0 6 6 6 5 Kelch motif Kelch_3 PF13415.6 BAM38576.1 - 7e-17 61.3 13.8 0.015 15.6 0.0 6.5 6 0 0 6 6 6 5 Galactose oxidase, central domain Sin_N PF04801.13 BAM38577.1 - 1.2e-27 97.2 2.7 1.6e-20 73.7 0.0 3.8 3 1 1 4 4 4 3 Sin-like protein conserved region PKcGMP_CC PF16808.5 BAM38578.1 - 0.027 14.3 0.4 0.027 14.3 0.4 3.1 3 0 0 3 3 3 0 Coiled-coil N-terminus of cGMP-dependent protein kinase TRAF_BIRC3_bd PF16673.5 BAM38578.1 - 0.32 10.8 6.7 0.085 12.7 2.3 2.3 2 0 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain ENT PF03735.14 BAM38578.1 - 1.7 8.8 10.2 14 5.8 1.6 4.1 3 1 0 3 3 3 0 ENT domain OPA3 PF07047.12 BAM38580.1 - 7.9e-32 109.7 0.0 1.1e-31 109.2 0.0 1.2 1 0 0 1 1 1 1 Optic atrophy 3 protein (OPA3) MMR_HSR1 PF01926.23 BAM38581.1 - 7.1e-09 35.8 0.3 2.1e-08 34.2 0.0 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_16 PF13191.6 BAM38581.1 - 0.00028 21.3 0.1 0.002 18.5 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain GTP_EFTU PF00009.27 BAM38581.1 - 0.00039 20.0 0.1 0.42 10.1 0.0 2.5 2 1 0 2 2 2 2 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 BAM38581.1 - 0.0047 16.8 0.1 0.042 13.7 0.1 2.3 1 1 0 1 1 1 1 RsgA GTPase TniB PF05621.11 BAM38581.1 - 0.0053 16.2 0.0 0.0095 15.4 0.0 1.3 1 0 0 1 1 1 1 Bacterial TniB protein FtsK_SpoIIIE PF01580.18 BAM38581.1 - 0.097 12.0 0.0 0.44 9.9 0.0 1.9 2 0 0 2 2 2 0 FtsK/SpoIIIE family Roc PF08477.13 BAM38581.1 - 0.16 12.2 0.1 1.4 9.2 0.0 2.3 2 1 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase DEAD PF00270.29 BAM38582.1 - 2.8e-32 111.9 0.4 4.7e-32 111.1 0.4 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM38582.1 - 4.3e-24 85.0 0.0 9.9e-24 83.8 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM38582.1 - 0.00023 21.2 0.0 0.00043 20.3 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 BAM38582.1 - 0.038 14.3 0.1 0.15 12.4 0.1 2.0 1 1 0 1 1 1 0 AAA domain DUF846 PF05832.12 BAM38584.1 - 2.8e-16 59.8 12.1 3.3e-16 59.6 12.1 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF846) C1-set PF07654.15 BAM38585.1 - 0.017 15.4 0.1 0.034 14.5 0.1 1.4 1 0 0 1 1 1 0 Immunoglobulin C1-set domain TPR_19 PF14559.6 BAM38586.1 - 1.7e-10 41.2 7.4 0.12 12.9 0.2 7.5 6 1 0 7 7 7 3 Tetratricopeptide repeat TPR_14 PF13428.6 BAM38586.1 - 7.4e-06 26.4 9.9 2.9 8.9 0.0 8.3 9 1 1 10 10 8 2 Tetratricopeptide repeat TPR_12 PF13424.6 BAM38586.1 - 8.6e-06 26.0 18.7 0.32 11.3 1.5 8.9 10 0 0 10 10 10 1 Tetratricopeptide repeat TPR_6 PF13174.6 BAM38586.1 - 2.7e-05 24.5 3.9 0.094 13.4 0.1 6.3 6 0 0 6 6 5 1 Tetratricopeptide repeat TPR_2 PF07719.17 BAM38586.1 - 0.00014 21.7 21.8 0.5 10.6 0.0 10.0 13 0 0 13 13 13 2 Tetratricopeptide repeat TPR_11 PF13414.6 BAM38586.1 - 0.0035 17.0 0.2 0.031 14.0 0.0 2.8 2 0 0 2 2 2 1 TPR repeat Thoc2 PF11732.8 BAM38586.1 - 0.011 15.7 0.0 0.047 13.8 0.0 2.1 1 0 0 1 1 1 0 Transcription- and export-related complex subunit TPR_8 PF13181.6 BAM38586.1 - 0.14 12.4 25.1 0.55 10.6 0.1 9.6 11 0 0 11 11 10 0 Tetratricopeptide repeat TPR_4 PF07721.14 BAM38586.1 - 0.24 12.1 8.5 8.8 7.3 0.2 4.7 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_17 PF13431.6 BAM38586.1 - 0.7 10.4 4.8 54 4.5 0.1 4.8 4 0 0 4 4 3 0 Tetratricopeptide repeat DIT1_PvcA PF05141.12 BAM38586.1 - 2.5 7.5 9.2 1.7 8.0 5.3 2.2 1 1 1 2 2 2 0 Pyoverdine/dityrosine biosynthesis protein TPR_1 PF00515.28 BAM38586.1 - 7.4 6.6 14.7 35 4.4 0.1 7.1 9 0 0 9 9 8 0 Tetratricopeptide repeat RAP PF08373.10 BAM38587.1 - 0.0016 18.5 0.0 0.0085 16.2 0.0 2.2 2 0 0 2 2 2 1 RAP domain LTV PF04180.14 BAM38587.1 - 0.19 11.5 0.0 0.29 10.8 0.0 1.2 1 0 0 1 1 1 0 Low temperature viability protein NifU PF01106.17 BAM38588.1 - 2.9e-17 62.6 0.0 4.2e-17 62.0 0.0 1.2 1 0 0 1 1 1 1 NifU-like domain HSR PF03172.13 BAM38590.1 - 0.065 13.4 0.1 0.15 12.2 0.1 1.6 1 1 0 1 1 1 0 HSR domain CENP-L PF13092.6 BAM38590.1 - 0.12 12.6 0.2 0.15 12.2 0.2 1.3 1 1 0 1 1 1 0 Kinetochore complex Sim4 subunit Fta1 PP2C PF00481.21 BAM38591.1 - 7.2e-40 137.2 0.0 8.7e-40 137.0 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C PP2C_2 PF13672.6 BAM38591.1 - 0.058 13.0 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 Protein phosphatase 2C Ribosomal_L33 PF00471.20 BAM38593.1 - 9.8e-19 67.5 3.0 1.3e-18 67.1 3.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L33 ACBP PF00887.19 BAM38594.1 - 1.2e-29 102.4 1.1 1.4e-29 102.2 1.1 1.1 1 0 0 1 1 1 1 Acyl CoA binding protein AP2 PF00847.20 BAM38595.1 - 4.7e-15 55.6 1.6 4.7e-15 55.6 1.6 2.5 3 0 0 3 3 3 1 AP2 domain LAGLIDADG_3 PF14528.6 BAM38595.1 - 0.42 11.0 2.3 3.9 7.9 0.1 3.5 4 0 0 4 4 4 0 LAGLIDADG-like domain JmjC PF02373.22 BAM38597.1 - 4.2e-35 120.6 0.5 8e-35 119.7 0.5 1.5 1 0 0 1 1 1 1 JmjC domain, hydroxylase zf-C5HC2 PF02928.16 BAM38597.1 - 1.8e-08 34.6 9.5 5.8e-08 33.0 9.5 2.0 1 0 0 1 1 1 1 C5HC2 zinc finger JmjN PF02375.17 BAM38597.1 - 2.2e-08 33.9 0.1 1.1e-07 31.7 0.0 2.3 2 0 0 2 2 2 1 jmjN domain HEAT_EZ PF13513.6 BAM38599.1 - 4.8e-11 42.9 1.0 3.1e-06 27.6 0.0 4.7 6 0 0 6 6 6 2 HEAT-like repeat HEAT PF02985.22 BAM38599.1 - 6.5e-11 41.5 0.6 0.02 15.1 0.1 6.1 5 0 0 5 5 5 3 HEAT repeat Cnd1 PF12717.7 BAM38599.1 - 0.00011 22.3 11.4 0.0069 16.4 0.1 4.3 2 2 2 4 4 4 2 non-SMC mitotic condensation complex subunit 1 IBN_N PF03810.19 BAM38599.1 - 0.00052 19.9 0.1 0.0026 17.7 0.0 2.4 2 0 0 2 2 2 1 Importin-beta N-terminal domain Tti2 PF10521.9 BAM38599.1 - 0.065 12.8 0.0 1.8 8.0 0.0 2.9 3 0 0 3 3 3 0 Tti2 family DCB PF16213.5 BAM38599.1 - 0.29 10.8 2.5 1.9 8.1 1.7 2.6 2 1 0 2 2 2 0 Dimerisation and cyclophilin-binding domain of Mon2 TcdB_N PF12918.7 BAM38601.1 - 0.39 11.0 3.5 2 8.7 0.1 4.0 4 0 0 4 4 4 0 TcdB toxin N-terminal helical domain DUF1648 PF07853.11 BAM38602.1 - 0.064 12.9 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1648) SAM_2 PF07647.17 BAM38602.1 - 0.075 13.2 0.0 0.31 11.2 0.0 2.1 2 1 0 2 2 2 0 SAM domain (Sterile alpha motif) Methyltr_RsmB-F PF01189.17 BAM38603.1 - 1.1e-36 126.4 0.0 1.4e-35 122.8 0.0 2.6 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F FtsJ PF01728.19 BAM38603.1 - 0.001 19.2 0.0 0.0023 18.1 0.0 1.5 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_31 PF13847.6 BAM38603.1 - 0.056 13.2 0.0 0.12 12.2 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain ANT PF03374.14 BAM38603.1 - 0.19 12.1 1.3 0.47 10.8 0.4 2.0 2 0 0 2 2 2 0 Phage antirepressor protein KilAC domain HECT PF00632.25 BAM38605.1 - 7.2e-42 143.9 1.9 2.4e-41 142.2 0.0 2.5 3 0 0 3 3 3 1 HECT-domain (ubiquitin-transferase) LSM14 PF12701.7 BAM38607.1 - 0.05 13.7 0.0 0.11 12.6 0.0 1.5 1 1 1 2 2 2 0 Scd6-like Sm domain DUF648 PF04890.13 BAM38608.1 - 0.0064 16.3 0.7 0.95 9.2 0.1 2.2 2 0 0 2 2 2 2 Family of unknown function (DUF648) DUF805 PF05656.14 BAM38608.1 - 0.1 13.0 2.4 0.45 10.9 2.4 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF805) OrfB_IS605 PF01385.19 BAM38609.1 - 0.032 14.5 0.7 0.044 14.0 0.7 1.2 1 0 0 1 1 1 0 Probable transposase GET2 PF08690.10 BAM38609.1 - 1.1 8.9 8.7 1.4 8.5 8.7 1.1 1 0 0 1 1 1 0 GET complex subunit GET2 B56 PF01603.20 BAM38610.1 - 3e-145 484.3 13.4 4.1e-145 483.9 13.4 1.2 1 0 0 1 1 1 1 Protein phosphatase 2A regulatory B subunit (B56 family) IMP2_N PF18590.1 BAM38610.1 - 1.3e-25 89.8 1.1 2.7e-25 88.7 0.2 2.1 2 0 0 2 2 2 1 Immune Mapped Protein 2 (IMP2) N-terminal domain V-SNARE PF05008.15 BAM38611.1 - 9.2e-05 22.7 0.3 0.00033 21.0 0.0 2.1 2 1 0 2 2 2 1 Vesicle transport v-SNARE protein N-terminus V-SNARE_C PF12352.8 BAM38611.1 - 0.0046 17.2 0.6 0.029 14.7 0.0 2.5 3 0 0 3 3 3 1 Snare region anchored in the vesicle membrane C-terminus RRM_1 PF00076.22 BAM38612.1 - 1.1e-17 63.6 0.0 6.8e-13 48.2 0.0 2.4 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) WW PF00397.26 BAM38612.1 - 7.3e-10 38.8 4.1 7.3e-10 38.8 4.1 2.1 2 0 0 2 2 2 1 WW domain Nrap_D2 PF17403.2 BAM38612.1 - 0.023 14.4 0.1 0.038 13.8 0.1 1.3 1 0 0 1 1 1 0 Nrap protein PAP/OAS-like domain Nup35_RRM_2 PF14605.6 BAM38612.1 - 0.17 11.9 0.0 2.6 8.1 0.0 2.6 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif TPR_14 PF13428.6 BAM38613.1 - 2.2e-08 34.2 3.3 34 5.6 0.0 8.6 7 2 2 9 9 9 0 Tetratricopeptide repeat TPR_8 PF13181.6 BAM38613.1 - 4.7e-06 26.4 12.1 0.032 14.4 0.1 7.3 8 0 0 8 8 8 2 Tetratricopeptide repeat TPR_12 PF13424.6 BAM38613.1 - 1.2e-05 25.5 4.6 1 9.7 0.0 5.8 7 0 0 7 7 5 1 Tetratricopeptide repeat Mad3_BUB1_I PF08311.12 BAM38613.1 - 0.00044 20.2 1.0 0.00044 20.2 1.0 6.3 5 3 3 8 8 8 1 Mad3/BUB1 homology region 1 TPR_MalT PF17874.1 BAM38613.1 - 0.0027 17.1 0.0 0.39 10.0 0.0 3.0 3 0 0 3 3 3 1 MalT-like TPR region RPN7 PF10602.9 BAM38613.1 - 0.0098 15.6 0.3 5.5 6.7 0.0 3.3 1 1 2 3 3 3 1 26S proteasome subunit RPN7 TPR_2 PF07719.17 BAM38613.1 - 0.035 14.2 13.1 0.35 11.1 0.0 6.1 7 0 0 7 7 6 0 Tetratricopeptide repeat GP3_package PF16677.5 BAM38613.1 - 0.11 12.6 0.3 0.49 10.5 0.1 2.2 2 0 0 2 2 2 0 DNA-packaging protein gp3 TPR_1 PF00515.28 BAM38613.1 - 0.13 12.1 5.4 6.8 6.7 0.0 4.8 4 0 0 4 4 4 0 Tetratricopeptide repeat Suf PF05843.14 BAM38613.1 - 0.15 12.0 13.8 3.2 7.7 0.5 4.9 6 0 0 6 6 6 0 Suppressor of forked protein (Suf) TPR_10 PF13374.6 BAM38613.1 - 1.9 8.5 6.8 92 3.1 0.0 5.3 6 0 0 6 6 6 0 Tetratricopeptide repeat NRDE-2 PF08424.10 BAM38613.1 - 8.5 5.4 7.0 18 4.4 0.1 4.3 5 1 0 5 5 5 0 NRDE-2, necessary for RNA interference COG5 PF10392.9 BAM38614.1 - 0.0038 17.4 2.1 0.0087 16.2 0.3 2.4 1 1 1 2 2 2 1 Golgi transport complex subunit 5 DUF4795 PF16043.5 BAM38614.1 - 0.11 12.0 5.3 0.072 12.7 0.7 2.4 2 1 0 2 2 2 0 Domain of unknown function (DUF4795) DUF5332 PF17266.2 BAM38614.1 - 1.1 8.9 4.1 4.9 6.8 0.2 2.9 3 0 0 3 3 3 0 Family of unknown function (DUF5332) MA3 PF02847.17 BAM38614.1 - 6.5 6.8 8.1 2.4 8.2 0.7 3.6 3 1 1 4 4 4 0 MA3 domain PNK3P PF08645.11 BAM38615.1 - 4.6e-23 81.7 0.0 5.5e-18 65.2 0.0 2.7 2 1 1 3 3 3 2 Polynucleotide kinase 3 phosphatase KTI12 PF08433.10 BAM38615.1 - 2.5e-07 30.4 0.5 2.8e-06 27.0 0.2 2.2 1 1 1 2 2 2 1 Chromatin associated protein KTI12 AAA_33 PF13671.6 BAM38615.1 - 5.6e-07 29.8 0.2 3.5e-05 24.0 0.0 2.3 1 1 1 2 2 2 1 AAA domain CPT PF07931.12 BAM38615.1 - 0.0038 17.1 0.3 0.013 15.3 0.1 1.8 1 1 1 2 2 2 1 Chloramphenicol phosphotransferase-like protein ATP-synt_ab PF00006.25 BAM38615.1 - 0.1 12.3 0.0 0.15 11.7 0.0 1.3 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_22 PF13401.6 BAM38615.1 - 0.11 12.8 0.9 1.5 9.1 0.8 2.6 2 1 0 2 2 2 0 AAA domain HTH_15 PF12324.8 BAM38615.1 - 0.15 12.0 0.0 0.57 10.2 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain of alkylmercury lyase FPL PF09758.9 BAM38616.1 - 0.0072 16.3 2.0 0.047 13.7 0.3 3.5 2 0 0 2 2 2 1 Uncharacterised conserved protein HEAT_EZ PF13513.6 BAM38616.1 - 0.022 15.3 0.2 3.6 8.2 0.1 4.5 3 0 0 3 3 3 0 HEAT-like repeat Imm47 PF15573.6 BAM38616.1 - 0.065 12.7 7.7 1.5 8.3 0.1 3.4 4 0 0 4 4 4 0 Immunity protein 47 LOH1CR12 PF10158.9 BAM38616.1 - 6.5 6.8 11.6 15 5.6 0.3 4.4 4 0 0 4 4 4 0 Tumour suppressor protein COX2 PF00116.20 BAM38617.1 - 0.0022 17.9 0.3 0.0053 16.6 0.3 1.6 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, periplasmic domain Fe-S_assembly PF04384.13 BAM38618.1 - 3.6e-19 69.1 0.2 5.3e-19 68.6 0.2 1.3 1 0 0 1 1 1 1 Iron-sulphur cluster assembly Vps4_C PF09336.10 BAM38618.1 - 0.18 11.8 0.2 17 5.5 0.0 2.3 2 0 0 2 2 2 0 Vps4 C terminal oligomerisation domain FAINT PF04385.15 BAM38619.1 - 0.11 12.6 3.4 0.062 13.4 1.2 1.7 2 0 0 2 2 2 0 Domain of unknown function, DUF529 Use1 PF09753.9 BAM38620.1 - 2.5e-05 24.1 14.3 0.00014 21.6 14.3 1.9 1 1 0 1 1 1 1 Membrane fusion protein Use1 ABC2_membrane_3 PF12698.7 BAM38620.1 - 0.0053 15.9 0.4 0.0064 15.6 0.4 1.2 1 0 0 1 1 1 1 ABC-2 family transporter protein Vps4_C PF09336.10 BAM38620.1 - 0.12 12.4 0.5 4.5 7.3 0.1 2.7 1 1 1 2 2 2 0 Vps4 C terminal oligomerisation domain Ribosomal_L27e PF01777.18 BAM38620.1 - 0.19 12.1 2.9 0.2 12.1 0.1 2.2 2 0 0 2 2 2 0 Ribosomal L27e protein family DUF883 PF05957.13 BAM38620.1 - 0.36 11.4 2.9 13 6.4 1.5 2.5 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF883) DUF2269 PF10027.9 BAM38621.1 - 0.25 11.4 4.7 0.037 14.1 1.0 1.6 2 1 0 2 2 2 0 Predicted integral membrane protein (DUF2269) IMS PF00817.20 BAM38622.1 - 0.12 12.3 0.0 0.12 12.3 0.0 2.1 3 0 0 3 3 3 0 impB/mucB/samB family Nop25 PF09805.9 BAM38622.1 - 3.8 8.0 11.7 0.22 12.0 5.5 2.0 2 0 0 2 2 2 0 Nucleolar protein 12 (25kDa) Sec23_trunk PF04811.15 BAM38623.1 - 2.8e-46 158.1 1.2 4e-46 157.5 0.4 1.7 2 0 0 2 2 2 1 Sec23/Sec24 trunk domain Sec23_BS PF08033.12 BAM38623.1 - 4.9e-19 68.9 0.8 8.9e-19 68.0 0.1 1.9 2 0 0 2 2 2 1 Sec23/Sec24 beta-sandwich domain zf-Sec23_Sec24 PF04810.15 BAM38623.1 - 5.4e-14 52.0 2.4 1.2e-13 50.9 2.4 1.6 1 0 0 1 1 1 1 Sec23/Sec24 zinc finger Sec23_helical PF04815.15 BAM38623.1 - 1.4e-05 24.8 0.1 3.4e-05 23.6 0.1 1.6 1 0 0 1 1 1 1 Sec23/Sec24 helical domain Gelsolin PF00626.22 BAM38623.1 - 6.8e-05 22.7 0.0 0.00017 21.5 0.0 1.6 1 0 0 1 1 1 1 Gelsolin repeat PRMT5 PF05185.16 BAM38624.1 - 5.4e-52 176.1 0.0 8.8e-52 175.4 0.0 1.3 1 0 0 1 1 1 1 PRMT5 arginine-N-methyltransferase PRMT5_C PF17286.2 BAM38624.1 - 4.8e-45 153.6 0.3 8.1e-45 152.8 0.3 1.4 1 0 0 1 1 1 1 PRMT5 oligomerisation domain PRMT5_TIM PF17285.2 BAM38624.1 - 1.7e-35 122.5 0.0 2.7e-35 121.8 0.0 1.3 1 0 0 1 1 1 1 PRMT5 TIM barrel domain Glycolytic PF00274.19 BAM38625.1 - 5.4e-141 469.4 0.2 6.2e-141 469.2 0.2 1.0 1 0 0 1 1 1 1 Fructose-bisphosphate aldolase class-I Prefoldin PF02996.17 BAM38626.1 - 1.9e-22 79.4 4.7 4.8e-21 74.9 4.7 2.1 1 1 0 1 1 1 1 Prefoldin subunit S6PP PF05116.13 BAM38626.1 - 0.025 14.1 0.0 0.03 13.8 0.0 1.3 1 0 0 1 1 1 0 Sucrose-6F-phosphate phosphohydrolase DUF1192 PF06698.11 BAM38626.1 - 0.035 14.1 0.1 0.088 12.9 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1192) DUF16 PF01519.16 BAM38626.1 - 0.096 13.2 1.6 2 9.0 0.2 2.2 2 0 0 2 2 2 0 Protein of unknown function DUF16 Prefoldin_2 PF01920.20 BAM38626.1 - 0.1 12.5 8.0 3.2 7.8 0.2 2.5 2 1 0 2 2 2 0 Prefoldin subunit AMPK1_CBM PF16561.5 BAM38626.1 - 0.13 12.5 0.0 0.36 11.1 0.0 1.8 2 0 0 2 2 2 0 Glycogen recognition site of AMP-activated protein kinase DUF1464 PF07318.12 BAM38626.1 - 0.18 11.0 0.5 0.5 9.5 0.1 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1464) NPV_P10 PF05531.12 BAM38626.1 - 0.41 11.2 4.3 0.43 11.1 1.3 2.1 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein HA2 PF04408.23 BAM38627.1 - 2.2e-11 44.0 0.0 4.6e-11 43.0 0.0 1.6 1 0 0 1 1 1 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 BAM38627.1 - 3e-08 33.9 0.1 8.6e-08 32.4 0.1 1.9 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Imm15 PF15561.6 BAM38627.1 - 0.007 16.6 1.7 0.045 14.0 0.1 2.6 2 0 0 2 2 2 1 Immunity protein 15 KaiA PF07688.12 BAM38627.1 - 0.19 11.9 2.3 0.34 11.1 0.4 2.4 2 0 0 2 2 2 0 KaiA C-terminal domain CtaG_Cox11 PF04442.14 BAM38628.1 - 9.8e-54 181.5 0.2 1.3e-53 181.1 0.2 1.2 1 0 0 1 1 1 1 Cytochrome c oxidase assembly protein CtaG/Cox11 DUF3130 PF11328.8 BAM38629.1 - 0.0081 16.4 0.4 0.024 14.8 0.4 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF3130 Type2_restr_D3 PF16902.5 BAM38630.1 - 0.034 14.1 0.1 0.17 11.8 0.1 2.2 1 0 0 1 1 1 0 Type-2 restriction enzyme D3 domain FAST_1 PF06743.15 BAM38630.1 - 0.11 12.4 3.4 0.26 11.2 0.1 2.8 2 0 0 2 2 2 0 FAST kinase-like protein, subdomain 1 Kin17_mid PF10357.9 BAM38631.1 - 6.1e-44 149.0 2.5 2.3e-43 147.1 2.5 2.0 1 0 0 1 1 1 1 Domain of Kin17 curved DNA-binding protein KOW PF00467.29 BAM38631.1 - 8.6e-06 25.5 0.0 2.5e-05 24.1 0.0 1.8 1 0 0 1 1 1 1 KOW motif KN17_SH3 PF18131.1 BAM38631.1 - 0.0027 17.8 0.1 0.0068 16.5 0.1 1.7 1 0 0 1 1 1 1 KN17 SH3-like C-terminal domain zf-met PF12874.7 BAM38631.1 - 0.0093 16.3 3.4 0.031 14.7 3.4 2.0 1 0 0 1 1 1 1 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 BAM38631.1 - 0.016 15.5 5.0 0.049 13.9 5.0 2.0 1 0 0 1 1 1 0 Zinc-finger double-stranded RNA-binding PTEN_C2 PF10409.9 BAM38631.1 - 0.018 14.8 0.3 0.039 13.7 0.3 1.6 1 0 0 1 1 1 0 C2 domain of PTEN tumour-suppressor protein DUF2540 PF10802.8 BAM38631.1 - 0.15 12.2 3.2 0.12 12.4 0.8 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2540) zf-C2H2_2 PF12756.7 BAM38631.1 - 1.1 9.6 9.4 1.7 9.0 5.4 2.7 1 1 1 2 2 2 0 C2H2 type zinc-finger (2 copies) Ribosomal_L22 PF00237.19 BAM38632.1 - 1.6e-08 34.7 0.0 2.8e-08 33.9 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e MgtE_N PF03448.17 BAM38632.1 - 0.0068 17.0 0.0 0.018 15.7 0.0 1.6 1 0 0 1 1 1 1 MgtE intracellular N domain Spo7_2_N PF15407.6 BAM38632.1 - 0.024 14.3 0.0 0.082 12.5 0.0 1.9 1 0 0 1 1 1 0 Sporulation protein family 7 DUF5066 PF16728.5 BAM38632.1 - 0.04 13.2 0.1 0.072 12.4 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5066) Ribosomal_L41 PF05162.13 BAM38632.1 - 3.1 7.9 6.1 8.2 6.6 6.1 1.7 1 0 0 1 1 1 0 Ribosomal protein L41 ISP3_C PF18045.1 BAM38633.1 - 6.4e-40 135.4 1.0 7.9e-40 135.2 1.0 1.1 1 0 0 1 1 1 1 ISP3 C-terminal ISP1_C PF18161.1 BAM38633.1 - 4.2e-38 129.6 1.0 5.2e-38 129.3 1.0 1.1 1 0 0 1 1 1 1 ISP1 C-terminal RRM_1 PF00076.22 BAM38635.1 - 1.8e-10 40.5 0.3 0.00013 21.7 0.1 2.8 3 0 0 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) SPOC PF07744.13 BAM38635.1 - 5.3e-10 39.4 0.0 1.6e-09 37.9 0.0 1.7 1 0 0 1 1 1 1 SPOC domain RRM_occluded PF16842.5 BAM38635.1 - 0.076 12.9 0.0 0.39 10.6 0.0 2.1 2 0 0 2 2 2 0 Occluded RNA-recognition motif ABC_tran PF00005.27 BAM38636.1 - 3.1e-34 118.4 0.0 3.9e-18 66.3 0.0 2.4 2 0 0 2 2 2 2 ABC transporter MeaB PF03308.16 BAM38636.1 - 1.5e-06 27.4 0.1 0.011 14.7 0.1 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB Zeta_toxin PF06414.12 BAM38636.1 - 4.1e-06 26.2 0.4 0.0055 16.0 0.1 2.4 2 0 0 2 2 2 2 Zeta toxin ABC_membrane PF00664.23 BAM38636.1 - 4.6e-06 26.5 18.5 4.6e-06 26.5 18.5 4.6 4 2 2 6 6 5 1 ABC transporter transmembrane region RsgA_GTPase PF03193.16 BAM38636.1 - 2.8e-05 24.1 0.6 0.27 11.1 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase AAA_30 PF13604.6 BAM38636.1 - 0.00064 19.5 0.8 0.023 14.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_29 PF13555.6 BAM38636.1 - 0.00068 19.3 0.6 0.94 9.3 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 BAM38636.1 - 0.011 15.8 0.5 1.8 8.7 0.1 2.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase ATP_bind_1 PF03029.17 BAM38636.1 - 0.011 15.5 0.3 4.2 7.1 0.1 2.6 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_10 PF12846.7 BAM38636.1 - 0.013 14.4 0.1 1.1 8.1 0.1 2.3 2 0 0 2 2 2 0 AAA-like domain TsaE PF02367.17 BAM38636.1 - 0.014 15.4 0.2 2.8 8.0 0.1 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_16 PF13191.6 BAM38636.1 - 0.016 15.6 0.0 2.1 8.7 0.0 2.3 2 0 0 2 2 2 0 AAA ATPase domain T2SSE PF00437.20 BAM38636.1 - 0.021 13.9 0.2 0.5 9.4 0.0 2.2 2 0 0 2 2 2 0 Type II/IV secretion system protein DUF4179 PF13786.6 BAM38636.1 - 0.022 15.2 0.7 3.3 8.3 0.4 3.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4179) SRP54 PF00448.22 BAM38636.1 - 0.031 13.9 0.1 0.074 12.7 0.1 1.6 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_23 PF13476.6 BAM38636.1 - 0.032 14.7 0.7 2.8 8.4 0.1 2.6 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 BAM38636.1 - 0.039 13.6 1.6 2.4 7.7 0.1 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain DnaB_C PF03796.15 BAM38636.1 - 0.045 13.1 0.1 6.8 5.9 0.1 2.4 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain AAA_22 PF13401.6 BAM38636.1 - 0.047 14.0 0.3 10 6.4 0.0 2.7 2 0 0 2 2 2 0 AAA domain TrwB_AAD_bind PF10412.9 BAM38636.1 - 0.062 12.2 1.1 5 5.9 0.0 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain FtsK_SpoIIIE PF01580.18 BAM38636.1 - 0.069 12.5 0.1 3.1 7.1 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family DUF815 PF05673.13 BAM38636.1 - 0.15 11.2 0.5 1.3 8.2 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_25 PF13481.6 BAM38636.1 - 0.17 11.5 0.0 18 4.9 0.0 2.5 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 BAM38636.1 - 0.21 11.5 1.4 1.7 8.5 0.1 2.2 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B DUF87 PF01935.17 BAM38636.1 - 0.39 10.8 3.8 5.1 7.1 0.1 2.7 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_33 PF13671.6 BAM38636.1 - 0.42 10.8 1.9 17 5.6 0.1 2.6 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 BAM38636.1 - 0.57 9.3 2.4 0.31 10.2 0.1 1.7 2 0 0 2 2 1 0 NB-ARC domain SMC_N PF02463.19 BAM38636.1 - 1.1 8.7 4.1 0.9 8.9 0.1 2.6 3 0 0 3 3 2 0 RecF/RecN/SMC N terminal domain PAC4 PF16093.5 BAM38637.1 - 1.2e-08 35.1 0.0 6.6e-08 32.6 0.0 2.2 2 0 0 2 2 2 1 Proteasome assembly chaperone 4 Methyltransf_5 PF01795.19 BAM38638.1 - 8.3e-86 288.3 2.2 3.8e-85 286.1 2.2 1.9 1 1 0 1 1 1 1 MraW methylase family Methyltransf_31 PF13847.6 BAM38638.1 - 0.00016 21.5 0.0 0.089 12.6 0.0 2.3 2 0 0 2 2 2 2 Methyltransferase domain Methyltransf_25 PF13649.6 BAM38638.1 - 0.0022 18.7 0.0 0.0061 17.2 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain TrkA_N PF02254.18 BAM38638.1 - 0.013 15.7 0.0 0.029 14.6 0.0 1.6 1 0 0 1 1 1 0 TrkA-N domain Methyltransf_15 PF09445.10 BAM38638.1 - 0.015 14.9 0.0 0.056 13.0 0.0 1.9 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase PCMT PF01135.19 BAM38638.1 - 0.019 14.7 0.0 0.04 13.7 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_12 PF08242.12 BAM38638.1 - 0.066 14.0 0.1 1.7 9.4 0.0 2.5 2 0 0 2 2 2 0 Methyltransferase domain Ubie_methyltran PF01209.18 BAM38638.1 - 0.067 12.5 0.0 1.6 8.0 0.0 2.2 2 0 0 2 2 2 0 ubiE/COQ5 methyltransferase family Methyltr_RsmB-F PF01189.17 BAM38638.1 - 0.069 12.8 0.0 0.35 10.5 0.0 1.9 2 0 0 2 2 2 0 16S rRNA methyltransferase RsmB/F MTS PF05175.14 BAM38638.1 - 0.085 12.4 0.0 14 5.2 0.0 2.5 2 0 0 2 2 2 0 Methyltransferase small domain FtsJ PF01728.19 BAM38638.1 - 0.12 12.4 0.0 1 9.5 0.0 2.1 2 0 0 2 2 2 0 FtsJ-like methyltransferase Rotamase PF00639.21 BAM38639.1 - 1.3e-20 74.1 0.0 1.5e-20 74.0 0.0 1.0 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_3 PF13616.6 BAM38639.1 - 1e-18 67.9 0.0 1.3e-18 67.6 0.0 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain Rotamase_2 PF13145.6 BAM38639.1 - 2.5e-05 25.1 0.0 2.9e-05 24.9 0.0 1.1 1 0 0 1 1 1 1 PPIC-type PPIASE domain HisKA_3 PF07730.13 BAM38639.1 - 0.052 14.1 0.9 0.09 13.3 0.9 1.4 1 0 0 1 1 1 0 Histidine kinase TAP42 PF04177.12 BAM38640.1 - 7.8e-39 133.7 7.5 1e-38 133.3 7.5 1.1 1 0 0 1 1 1 1 TAP42-like family Lactamase_B_2 PF12706.7 BAM38641.1 - 2.7e-10 40.1 0.0 5e-05 22.9 0.0 3.2 3 0 0 3 3 3 2 Beta-lactamase superfamily domain Lactamase_B PF00753.27 BAM38641.1 - 3.1e-07 30.6 0.0 6.2e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Dynein_AAA_lid PF17852.1 BAM38641.1 - 0.0086 16.2 0.1 0.043 13.9 0.0 2.2 2 0 0 2 2 2 1 Dynein heavy chain AAA lid domain Lactamase_B_4 PF13691.6 BAM38641.1 - 0.029 14.1 0.0 0.076 12.7 0.0 1.7 1 0 0 1 1 1 0 tRNase Z endonuclease Glycos_transf_4 PF00953.21 BAM38642.1 - 5.6e-23 81.7 4.9 5.6e-23 81.7 4.9 2.0 2 0 0 2 2 2 1 Glycosyl transferase family 4 AMP-binding PF00501.28 BAM38643.1 - 3.7e-69 233.4 0.0 5e-69 232.9 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 BAM38643.1 - 5.1e-06 27.4 0.1 1.1e-05 26.3 0.1 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Tropomyosin_1 PF12718.7 BAM38644.1 - 0.01 16.0 18.0 0.01 16.0 18.0 5.0 4 1 2 6 6 6 0 Tropomyosin like DUF812 PF05667.11 BAM38644.1 - 0.015 14.2 57.8 0.018 13.9 17.7 4.0 2 2 2 4 4 4 0 Protein of unknown function (DUF812) HrpB7 PF09486.10 BAM38644.1 - 0.022 15.2 0.4 0.022 15.2 0.4 5.0 4 1 2 6 6 6 0 Bacterial type III secretion protein (HrpB7) Phage_X PF05155.15 BAM38644.1 - 0.035 14.5 0.1 23 5.5 0.1 3.0 2 0 0 2 2 2 0 Phage X family Fez1 PF06818.15 BAM38644.1 - 0.45 10.9 62.8 0.15 12.5 13.4 5.2 4 1 1 5 5 5 0 Fez1 GAS PF13851.6 BAM38644.1 - 1.4 8.2 79.2 0.093 12.1 9.7 7.0 4 2 2 6 6 6 0 Growth-arrest specific micro-tubule binding PilJ PF13675.6 BAM38644.1 - 2.2 8.3 11.6 0.58 10.2 0.1 4.1 4 1 1 5 5 5 0 Type IV pili methyl-accepting chemotaxis transducer N-term Wyosine_form PF08608.12 BAM38646.1 - 4.9e-25 87.6 0.1 9.8e-25 86.7 0.1 1.5 1 0 0 1 1 1 1 Wyosine base formation Radical_SAM PF04055.21 BAM38646.1 - 2.2e-22 80.2 0.2 4.9e-22 79.1 0.2 1.6 1 0 0 1 1 1 1 Radical SAM superfamily CENP-B_dimeris PF09026.10 BAM38646.1 - 0.42 11.0 6.8 1.1 9.7 6.8 1.7 1 0 0 1 1 1 0 Centromere protein B dimerisation domain DUF4611 PF15387.6 BAM38646.1 - 0.52 10.6 5.2 1.1 9.5 5.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) RNA_pol_A_bac PF01000.26 BAM38647.1 - 1.2e-10 41.8 0.0 3e-10 40.5 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 BAM38647.1 - 8.9e-06 25.1 0.0 1.8e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain HHH_5 PF14520.6 BAM38647.1 - 0.085 13.5 0.0 0.32 11.6 0.0 1.9 2 0 0 2 2 2 0 Helix-hairpin-helix domain ThiF PF00899.21 BAM38648.1 - 4.4e-63 212.9 0.0 6.1e-63 212.4 0.0 1.1 1 0 0 1 1 1 1 ThiF family UAE_UbL PF14732.6 BAM38648.1 - 1.1e-10 41.9 0.0 2.6e-10 40.8 0.0 1.7 1 0 0 1 1 1 1 Ubiquitin/SUMO-activating enzyme ubiquitin-like domain UBA_e1_thiolCys PF10585.9 BAM38648.1 - 3.4e-09 37.0 0.5 1.6e-05 25.0 0.2 2.4 1 1 0 2 2 2 2 Ubiquitin-activating enzyme active site Shikimate_DH PF01488.20 BAM38648.1 - 5.1e-05 23.4 0.1 0.00019 21.5 0.1 2.1 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase NAD_binding_7 PF13241.6 BAM38648.1 - 0.0037 17.7 0.0 0.0088 16.5 0.0 1.5 1 0 0 1 1 1 1 Putative NAD(P)-binding Sacchrp_dh_NADP PF03435.18 BAM38648.1 - 0.022 15.0 0.5 0.11 12.7 0.5 2.1 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain Myb_DNA-binding PF00249.31 BAM38649.1 - 3.4e-10 39.9 0.0 7.3e-10 38.9 0.0 1.6 1 0 0 1 1 1 1 Myb-like DNA-binding domain ZZ PF00569.17 BAM38649.1 - 1.6e-07 31.0 8.2 2.9e-07 30.2 8.2 1.4 1 0 0 1 1 1 1 Zinc finger, ZZ type Myb_DNA-bind_6 PF13921.6 BAM38649.1 - 3.7e-06 27.1 0.0 1.1e-05 25.6 0.0 1.8 1 0 0 1 1 1 1 Myb-like DNA-binding domain Thioredoxin PF00085.20 BAM38650.1 - 4.5e-14 52.3 0.0 2.5e-13 49.9 0.0 2.4 2 0 0 2 2 2 1 Thioredoxin Thioredoxin_6 PF13848.6 BAM38650.1 - 1.6e-09 38.0 8.0 0.00015 21.8 2.3 3.6 3 1 0 3 3 3 3 Thioredoxin-like domain Glutaredoxin PF00462.24 BAM38650.1 - 0.00084 19.5 0.0 0.0058 16.8 0.0 2.6 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_2 PF13098.6 BAM38650.1 - 0.0032 17.9 0.1 0.039 14.4 0.0 2.9 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_7 PF13899.6 BAM38650.1 - 0.016 15.4 0.0 0.044 14.0 0.0 1.8 1 0 0 1 1 1 0 Thioredoxin-like Spore-coat_CotD PF11122.8 BAM38650.1 - 0.17 12.7 0.1 0.45 11.4 0.1 1.7 1 0 0 1 1 1 0 Inner spore coat protein D Suf PF05843.14 BAM38651.1 - 7.3e-05 22.9 19.8 0.0012 18.9 4.5 4.3 4 1 0 4 4 4 3 Suppressor of forked protein (Suf) TPR_14 PF13428.6 BAM38651.1 - 0.024 15.4 4.0 67 4.7 0.1 5.5 4 2 2 6 6 6 0 Tetratricopeptide repeat TPR_8 PF13181.6 BAM38651.1 - 1.6 9.2 5.4 1.6 9.2 0.9 3.2 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 BAM38651.1 - 7.2 7.0 9.4 8.8 6.7 0.8 3.8 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF760 PF05542.11 BAM38652.1 - 2.2e-22 79.2 0.0 3.6e-10 40.1 0.0 2.6 2 1 0 2 2 2 2 Protein of unknown function (DUF760) YkpC PF17447.2 BAM38654.1 - 0.11 13.2 0.2 0.27 12.1 0.2 1.7 1 0 0 1 1 1 0 Uncharacterized YkpC-like ArfGap PF01412.18 BAM38655.1 - 2.1e-38 131.0 0.5 4.3e-38 130.0 0.0 1.8 2 0 0 2 2 2 1 Putative GTPase activating protein for Arf DZR PF12773.7 BAM38655.1 - 0.12 12.4 0.1 0.22 11.5 0.1 1.3 1 0 0 1 1 1 0 Double zinc ribbon IMCp PF12314.8 BAM38656.1 - 1.8e-17 63.4 56.1 5.6e-12 45.8 26.9 2.1 1 1 1 2 2 2 2 Inner membrane complex protein DUF5070 PF16802.5 BAM38656.1 - 0.31 11.0 2.5 0.45 10.5 0.1 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5070) Ribosomal_L32p PF01783.23 BAM38657.1 - 0.016 15.5 6.7 0.029 14.6 6.7 1.4 1 0 0 1 1 1 0 Ribosomal L32p protein family SpoU_methylase PF00588.19 BAM38658.1 - 4.5e-06 26.9 0.0 9.4e-06 25.8 0.0 1.6 2 0 0 2 2 2 1 SpoU rRNA Methylase family WD40 PF00400.32 BAM38659.1 - 3.5e-11 43.5 6.6 0.00089 20.0 0.3 4.0 3 0 0 3 3 3 3 WD domain, G-beta repeat PAS_12 PF18095.1 BAM38659.1 - 0.022 14.4 0.0 0.043 13.4 0.0 1.4 1 0 0 1 1 1 0 UPF0242 C-terminal PAS-like domain WD40_like PF17005.5 BAM38659.1 - 0.066 12.5 0.0 0.39 10.0 0.0 1.9 2 0 0 2 2 2 0 WD40-like domain CAF1C_H4-bd PF12265.8 BAM38660.1 - 4.2e-12 46.1 0.1 1.1e-11 44.8 0.1 1.8 1 0 0 1 1 1 1 Histone-binding protein RBBP4 or subunit C of CAF1 complex WD40 PF00400.32 BAM38660.1 - 2.7e-10 40.6 3.5 0.055 14.4 0.1 5.6 5 1 0 5 5 5 4 WD domain, G-beta repeat Peptidase_S31 PF05578.12 BAM38660.1 - 0.031 13.8 1.6 0.23 10.9 0.2 2.1 1 1 1 2 2 2 0 Pestivirus NS3 polyprotein peptidase S31 DUF4387 PF14330.6 BAM38661.1 - 0.077 13.7 0.8 2.7 8.7 0.8 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4387) Csm1_B PF18211.1 BAM38662.1 - 0.065 13.1 0.7 0.24 11.3 0.1 2.3 2 0 0 2 2 2 0 Csm1 subunit domain B tRNA-synt_His PF13393.6 BAM38663.1 - 1.4e-49 169.1 0.5 5.2e-49 167.2 0.0 2.0 2 0 0 2 2 2 1 Histidyl-tRNA synthetase HGTP_anticodon PF03129.20 BAM38663.1 - 5.9e-13 48.8 0.2 1.3e-12 47.7 0.2 1.6 1 0 0 1 1 1 1 Anticodon binding domain HGTP_anticodon2 PF12745.7 BAM38663.1 - 9.4e-06 25.3 0.6 2.7e-05 23.8 0.6 1.7 1 0 0 1 1 1 1 Anticodon binding domain of tRNAs tRNA-synt_2 PF00152.20 BAM38663.1 - 0.00074 18.7 0.4 0.0034 16.5 0.0 2.1 2 0 0 2 2 2 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 BAM38663.1 - 0.022 14.2 0.1 0.09 12.2 0.1 2.0 1 1 0 1 1 1 0 tRNA synthetases class II core domain (F) DUF4071 PF13281.6 BAM38663.1 - 0.043 12.9 2.7 0.085 11.9 2.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4071) TIR_2 PF13676.6 BAM38663.1 - 0.094 13.3 0.1 0.27 11.8 0.1 1.8 1 0 0 1 1 1 0 TIR domain Tail_spike_N PF18668.1 BAM38663.1 - 0.15 11.9 0.0 0.39 10.6 0.0 1.6 1 0 0 1 1 1 0 Tail spike TSP1/Gp66 receptor binding N-terminal domain DEAD PF00270.29 BAM38664.1 - 2.5e-30 105.5 0.3 1.1e-29 103.4 0.1 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM38664.1 - 1.8e-24 86.2 0.3 9.2e-24 83.9 0.3 2.3 1 1 0 1 1 1 1 Helicase conserved C-terminal domain AAA_22 PF13401.6 BAM38664.1 - 0.026 14.8 0.3 1.3 9.3 0.2 2.9 2 1 0 2 2 2 0 AAA domain Zot PF05707.12 BAM38664.1 - 0.047 13.3 0.0 0.15 11.7 0.0 1.9 1 0 0 1 1 1 0 Zonular occludens toxin (Zot) DAP3 PF10236.9 BAM38665.1 - 4.4e-17 62.2 0.0 3.4e-14 52.7 0.0 2.6 3 0 0 3 3 3 2 Mitochondrial ribosomal death-associated protein 3 AAA_16 PF13191.6 BAM38665.1 - 0.0013 19.2 0.1 0.0031 17.9 0.1 1.8 1 1 0 1 1 1 1 AAA ATPase domain EF-hand_3 PF09069.11 BAM38665.1 - 0.14 12.6 0.0 0.37 11.2 0.0 1.7 1 0 0 1 1 1 0 EF-hand AAA_30 PF13604.6 BAM38665.1 - 0.16 11.6 0.0 0.26 11.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain Pkinase PF00069.25 BAM38666.1 - 3.2e-43 148.0 0.0 4.3e-43 147.6 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM38666.1 - 3.3e-20 72.5 0.0 5.2e-20 71.8 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Fib_alpha PF08702.10 BAM38668.1 - 0.00045 20.4 0.1 0.00045 20.4 0.1 5.4 5 0 0 5 5 5 1 Fibrinogen alpha/beta chain family DUF4606 PF15379.6 BAM38668.1 - 0.021 15.0 1.7 0.021 15.0 1.7 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4606) Receptor_IA-2 PF11548.8 BAM38668.1 - 0.083 12.9 3.9 4.3 7.4 0.1 3.1 3 0 0 3 3 3 0 Protein-tyrosine phosphatase receptor IA-2 DUF4830 PF16112.5 BAM38668.1 - 0.091 13.2 0.2 0.37 11.3 0.2 2.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4830) Carbam_trans_C PF16861.5 BAM38668.1 - 0.12 12.0 2.5 6.7 6.3 0.1 3.3 2 1 1 3 3 3 0 Carbamoyltransferase C-terminus Luteo_PO PF04662.13 BAM38669.1 - 0.013 15.2 0.2 0.014 15.1 0.2 1.2 1 0 0 1 1 1 0 Luteovirus P0 protein Acylphosphatase PF00708.18 BAM38669.1 - 0.052 13.9 0.0 0.082 13.3 0.0 1.4 1 0 0 1 1 1 0 Acylphosphatase Peptidase_M16 PF00675.20 BAM38670.1 - 5e-40 136.9 0.2 9.6e-40 136.0 0.2 1.4 1 0 0 1 1 1 1 Insulinase (Peptidase family M16) Peptidase_M16_C PF05193.21 BAM38670.1 - 4.8e-24 85.4 0.0 8.6e-21 74.8 0.0 3.4 3 0 0 3 3 3 1 Peptidase M16 inactive domain Trep_dent_lipo PF09710.10 BAM38670.1 - 0.018 14.0 0.2 0.029 13.3 0.2 1.2 1 0 0 1 1 1 0 Treponema clustered lipoprotein (Trep_dent_lipo) NDUF_B7 PF05676.13 BAM38670.1 - 0.021 14.5 0.1 0.068 12.9 0.1 1.8 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) Alpha-mann_mid PF09261.11 BAM38670.1 - 0.085 13.0 0.2 0.25 11.5 0.0 1.8 2 0 0 2 2 2 0 Alpha mannosidase middle domain Cmc1 PF08583.10 BAM38670.1 - 0.24 11.5 0.5 1.4 9.0 0.3 2.1 2 0 0 2 2 2 0 Cytochrome c oxidase biogenesis protein Cmc1 like GCP_N_terminal PF17681.1 BAM38671.1 - 6.7e-25 88.3 0.0 1.4e-24 87.3 0.0 1.5 1 0 0 1 1 1 1 Gamma tubulin complex component N-terminal TPR_MLP1_2 PF07926.12 BAM38672.1 - 0.0097 16.0 5.4 0.0097 16.0 5.4 8.5 4 2 3 7 7 7 2 TPR/MLP1/MLP2-like protein SlyX PF04102.12 BAM38672.1 - 0.032 14.9 0.3 0.032 14.9 0.3 7.2 3 3 3 6 6 6 0 SlyX Dsh_C PF12316.8 BAM38672.1 - 0.32 11.4 6.5 1.6 9.1 6.5 2.2 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal DUF1664 PF07889.12 BAM38672.1 - 1.4 9.0 49.8 0.68 10.0 7.6 6.4 1 1 3 6 6 6 0 Protein of unknown function (DUF1664) GlnE PF03710.15 BAM38674.1 - 0.091 12.2 0.0 0.36 10.2 0.0 1.8 2 0 0 2 2 2 0 Glutamate-ammonia ligase adenylyltransferase COMPASS-Shg1 PF05205.12 BAM38674.1 - 0.3 11.8 3.4 0.5 11.1 2.0 1.8 1 1 1 2 2 2 0 COMPASS (Complex proteins associated with Set1p) component shg1 Helicase_C_2 PF13307.6 BAM38675.1 - 3.4e-41 141.3 0.0 1.3e-40 139.4 0.0 2.0 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD_2 PF06733.15 BAM38675.1 - 2.1e-29 102.4 6.9 2.7e-20 72.7 3.3 3.4 2 1 0 2 2 2 2 DEAD_2 HBB PF06777.11 BAM38675.1 - 2e-24 86.3 1.2 3.3e-18 66.0 0.2 2.7 2 0 0 2 2 2 2 Helical and beta-bridge domain ResIII PF04851.15 BAM38675.1 - 7.5e-09 35.8 0.0 2.8e-05 24.2 0.0 2.8 2 1 1 3 3 3 2 Type III restriction enzyme, res subunit DEAD PF00270.29 BAM38675.1 - 0.013 15.3 0.2 0.18 11.5 0.0 2.4 3 0 0 3 3 3 0 DEAD/DEAH box helicase UBX PF00789.20 BAM38676.1 - 1.3e-13 50.9 0.0 3.1e-13 49.7 0.0 1.6 1 0 0 1 1 1 1 UBX domain MTES_1575 PF18741.1 BAM38676.1 - 0.062 13.5 1.3 0.17 12.0 0.6 2.0 2 0 0 2 2 2 0 REase_MTES_1575 ARID PF01388.21 BAM38677.1 - 2.8e-06 27.9 0.0 7.2e-06 26.6 0.0 1.7 1 0 0 1 1 1 1 ARID/BRIGHT DNA binding domain DUF2284 PF10050.9 BAM38677.1 - 0.025 14.3 0.4 0.084 12.6 0.4 1.9 1 0 0 1 1 1 0 Predicted metal-binding protein (DUF2284) MORN PF02493.20 BAM38678.1 - 1.8e-75 244.5 109.5 5.2e-07 29.2 1.9 15.3 16 0 0 16 16 16 14 MORN repeat ER PF01133.17 BAM38679.1 - 0.04 13.9 0.3 0.06 13.4 0.3 1.2 1 0 0 1 1 1 0 Enhancer of rudimentary DUF2045 PF09741.9 BAM38679.1 - 0.071 12.5 0.1 0.089 12.2 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2045) Mpp10 PF04006.12 BAM38680.1 - 9.7e-38 130.0 60.5 1.1e-20 73.7 50.9 2.4 2 0 0 2 2 2 2 Mpp10 protein tRNA-synt_2b PF00587.25 BAM38681.1 - 4.3e-21 75.7 0.0 2.4e-19 70.0 0.0 2.4 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 BAM38681.1 - 0.019 15.2 1.2 0.043 14.0 1.2 1.5 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain Tropomyosin_1 PF12718.7 BAM38681.1 - 0.036 14.2 0.7 0.036 14.2 0.7 1.7 2 0 0 2 2 2 0 Tropomyosin like TMF_DNA_bd PF12329.8 BAM38681.1 - 0.036 14.1 1.0 0.075 13.0 1.0 1.5 1 0 0 1 1 1 0 TATA element modulatory factor 1 DNA binding Fungal_TACC PF12709.7 BAM38681.1 - 0.036 14.5 0.5 0.098 13.1 0.5 1.7 1 0 0 1 1 1 0 Fungal Transforming acidic coiled-coil (TACC) proteins AGOG PF09171.10 BAM38681.1 - 0.12 11.7 0.3 0.2 11.0 0.3 1.3 1 0 0 1 1 1 0 N-glycosylase/DNA lyase SRP19 PF01922.17 BAM38682.1 - 2.3e-25 89.4 0.0 3e-25 89.0 0.0 1.1 1 0 0 1 1 1 1 SRP19 protein Peptidase_C74 PF12387.8 BAM38682.1 - 0.043 13.3 0.0 0.052 13.0 0.0 1.2 1 0 0 1 1 1 0 Pestivirus NS2 peptidase MACPF PF01823.19 BAM38683.1 - 2.4e-46 158.5 2.0 2.4e-46 158.5 2.0 2.9 3 0 0 3 3 3 1 MAC/Perforin domain tRNA_edit PF04073.15 BAM38685.1 - 5e-24 84.7 0.0 2.1e-23 82.7 0.0 2.0 2 0 0 2 2 2 1 Aminoacyl-tRNA editing domain ProRS-C_1 PF09180.11 BAM38685.1 - 1.1e-22 80.0 0.5 6.2e-22 77.6 0.9 2.2 3 0 0 3 3 3 1 Prolyl-tRNA synthetase, C-terminal tRNA-synt_2b PF00587.25 BAM38685.1 - 3.9e-21 75.8 0.0 1e-19 71.2 0.0 2.5 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 BAM38685.1 - 6.6e-20 71.1 0.3 3.1e-19 68.9 0.0 2.2 2 0 0 2 2 2 1 Anticodon binding domain Hexapep PF00132.24 BAM38686.1 - 1.3e-06 27.8 1.6 1.3e-06 27.8 1.6 3.1 2 1 0 3 3 3 2 Bacterial transferase hexapeptide (six repeats) W2 PF02020.18 BAM38686.1 - 0.00054 20.0 0.4 0.0018 18.4 0.4 2.0 1 0 0 1 1 1 1 eIF4-gamma/eIF5/eIF2-epsilon NTP_transferase PF00483.23 BAM38686.1 - 0.0034 17.0 0.0 0.0073 15.9 0.0 1.5 1 0 0 1 1 1 1 Nucleotidyl transferase DUF4954 PF16314.5 BAM38686.1 - 0.0041 15.3 3.0 0.0087 14.2 3.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4954) Fucokinase PF07959.12 BAM38686.1 - 0.011 14.7 0.1 0.018 14.0 0.1 1.4 1 0 0 1 1 1 0 L-fucokinase Pox_A_type_inc PF04508.12 BAM38687.1 - 0.15 11.9 0.4 0.15 11.9 0.4 2.3 3 0 0 3 3 3 0 Viral A-type inclusion protein repeat Phosphodiest PF01663.22 BAM38688.1 - 7.7e-06 25.7 0.3 0.00025 20.8 0.2 2.1 2 0 0 2 2 2 2 Type I phosphodiesterase / nucleotide pyrophosphatase Prenyltrans PF00432.21 BAM38691.1 - 2.6e-15 55.9 0.5 0.001 18.8 0.0 5.0 5 0 0 5 5 5 4 Prenyltransferase and squalene oxidase repeat Milton PF12448.8 BAM38691.1 - 0.2 11.7 0.1 0.55 10.3 0.0 1.8 2 0 0 2 2 2 0 Kinesin associated protein CorA PF01544.18 BAM38692.1 - 0.04 13.2 0.1 0.056 12.8 0.1 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein Fer2 PF00111.27 BAM38693.1 - 2.3e-10 40.3 0.6 3e-10 39.9 0.6 1.2 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain MCR PF18509.1 BAM38693.1 - 0.72 9.5 5.1 2.1 8.0 5.1 1.8 1 1 0 1 1 1 0 Magnetochrome domain Pox_Ag35 PF03286.14 BAM38694.1 - 0.0058 16.5 6.5 0.0072 16.1 6.5 1.1 1 0 0 1 1 1 1 Pox virus Ag35 surface protein RPN2_C PF18004.1 BAM38694.1 - 0.087 12.7 3.3 0.18 11.7 3.3 1.5 1 0 0 1 1 1 0 26S proteasome regulatory subunit RPN2 C-terminal domain NOA36 PF06524.12 BAM38694.1 - 0.11 11.8 5.2 0.12 11.7 5.2 1.3 1 0 0 1 1 1 0 NOA36 protein YL1 PF05764.13 BAM38694.1 - 0.17 12.0 9.9 0.21 11.6 9.9 1.1 1 0 0 1 1 1 0 YL1 nuclear protein CDC45 PF02724.14 BAM38694.1 - 0.26 9.5 8.7 0.33 9.2 8.7 1.1 1 0 0 1 1 1 0 CDC45-like protein Adaptin_binding PF10199.9 BAM38694.1 - 0.33 11.6 7.9 0.5 11.0 7.9 1.2 1 0 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 RNA_pol_Rpc4 PF05132.14 BAM38694.1 - 0.63 10.5 4.2 0.96 9.9 4.2 1.2 1 0 0 1 1 1 0 RNA polymerase III RPC4 PTPRCAP PF15713.5 BAM38694.1 - 2 8.7 11.9 2.9 8.1 11.9 1.2 1 0 0 1 1 1 0 Protein tyrosine phosphatase receptor type C-associated DNA_pol_phi PF04931.13 BAM38694.1 - 2.2 6.3 13.9 2.7 6.0 13.9 1.1 1 0 0 1 1 1 0 DNA polymerase phi DUF2065 PF09838.9 BAM38695.1 - 0.024 14.6 2.3 1.4 9.0 0.0 2.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2065) PHO4 PF01384.20 BAM38695.1 - 0.032 13.3 8.2 0.42 9.6 8.2 2.0 1 1 0 1 1 1 0 Phosphate transporter family TauE PF01925.19 BAM38695.1 - 0.077 12.6 15.8 0.021 14.5 12.6 1.6 1 1 0 1 1 1 0 Sulfite exporter TauE/SafE DUF3481 PF11980.8 BAM38695.1 - 0.29 10.9 2.6 2.5 7.9 2.3 2.5 1 1 1 2 2 2 0 C-terminal domain of neuropilin glycoprotein Phage_holin_5_2 PF16079.5 BAM38695.1 - 0.5 10.7 0.0 0.5 10.7 0.0 3.3 1 1 1 3 3 3 0 Phage holin family Hol44, in holin superfamily V DUF2208 PF09973.9 BAM38695.1 - 4.2 6.9 10.6 0.31 10.6 4.3 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2208) DUF4131 PF13567.6 BAM38695.1 - 7.9 6.1 7.3 1.3 8.7 0.7 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4131) AhpC-TSA PF00578.21 BAM38696.1 - 3.8e-29 101.1 0.0 5e-29 100.7 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 BAM38696.1 - 8.2e-13 48.3 0.0 1e-12 48.0 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 BAM38696.1 - 1.2e-09 37.9 0.1 3.5e-09 36.4 0.0 1.8 2 0 0 2 2 2 1 C-terminal domain of 1-Cys peroxiredoxin FAINT PF04385.15 BAM38698.1 - 1.8e-12 47.1 2.6 1.4e-05 25.0 0.1 2.5 2 0 0 2 2 2 2 Domain of unknown function, DUF529 Ribosomal_S11 PF00411.19 BAM38699.1 - 6.2e-05 23.4 0.0 9e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein S11 Ribosomal_L18p PF00861.22 BAM38699.1 - 0.00097 19.5 0.1 0.0028 18.0 0.1 1.9 1 1 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Utp12 PF04003.12 BAM38700.1 - 2e-13 50.6 0.7 3e-13 50.0 0.7 1.2 1 0 0 1 1 1 1 Dip2/Utp12 Family Ribosomal_L36 PF00444.18 BAM38700.1 - 1.7e-07 31.3 0.3 8.4e-07 29.1 0.1 2.2 2 0 0 2 2 2 1 Ribosomal protein L36 CLTH PF10607.9 BAM38701.1 - 7.3e-24 84.3 3.5 1.2e-23 83.6 3.5 1.4 1 0 0 1 1 1 1 CTLH/CRA C-terminal to LisH motif domain Utp11 PF03998.13 BAM38702.1 - 4.1e-27 95.7 18.0 4.6e-27 95.5 18.0 1.0 1 0 0 1 1 1 1 Utp11 protein SMN PF06003.12 BAM38702.1 - 0.07 12.4 0.3 0.12 11.6 0.3 1.4 1 0 0 1 1 1 0 Survival motor neuron protein (SMN) MutS_V PF00488.21 BAM38703.1 - 1.2e-69 234.2 0.3 2.4e-69 233.1 0.3 1.6 1 0 0 1 1 1 1 MutS domain V MutS_III PF05192.18 BAM38703.1 - 1.2e-31 110.5 0.3 3.2e-31 109.0 0.3 1.8 1 0 0 1 1 1 1 MutS domain III MutS_I PF01624.20 BAM38703.1 - 1.8e-31 108.7 0.4 5.4e-31 107.2 0.1 2.0 2 0 0 2 2 2 1 MutS domain I NB-ARC PF00931.22 BAM38703.1 - 0.0042 16.3 0.0 0.0094 15.2 0.0 1.5 1 0 0 1 1 1 1 NB-ARC domain AAA_23 PF13476.6 BAM38703.1 - 0.025 15.1 0.1 0.025 15.1 0.1 3.0 3 0 0 3 3 3 0 AAA domain MutS_II PF05188.17 BAM38703.1 - 0.026 14.8 1.7 0.068 13.4 0.1 2.4 2 0 0 2 2 2 0 MutS domain II ATPase_2 PF01637.18 BAM38703.1 - 0.036 14.0 0.1 0.29 11.0 0.0 2.3 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea 7tm_6 PF02949.20 BAM38703.1 - 0.039 13.0 0.0 0.083 12.0 0.0 1.5 1 0 0 1 1 1 0 7tm Odorant receptor AAA_14 PF13173.6 BAM38703.1 - 0.04 13.9 1.1 0.32 11.0 0.0 3.0 3 0 0 3 3 3 0 AAA domain DUF2238 PF09997.9 BAM38703.1 - 0.098 12.5 0.5 0.21 11.4 0.5 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2238) ABC_tran PF00005.27 BAM38703.1 - 0.11 13.1 0.8 2.6 8.5 0.4 2.9 2 1 0 2 2 2 0 ABC transporter LpxI_N PF17930.1 BAM38703.1 - 0.21 11.5 0.3 0.91 9.4 0.1 2.2 2 0 0 2 2 2 0 LpxI N-terminal domain LOH1CR12 PF10158.9 BAM38703.1 - 0.22 11.6 1.7 0.7 9.9 0.4 2.5 2 0 0 2 2 2 0 Tumour suppressor protein SRP72 PF08492.12 BAM38704.1 - 7.7e-10 39.1 6.3 2.1e-09 37.7 6.3 1.7 1 0 0 1 1 1 1 SRP72 RNA-binding domain TPR_14 PF13428.6 BAM38704.1 - 9.6e-07 29.1 0.0 3.3 8.8 0.0 4.2 3 1 2 5 5 4 3 Tetratricopeptide repeat TPR_19 PF14559.6 BAM38704.1 - 0.00034 21.1 0.6 0.73 10.4 0.2 3.1 3 1 0 3 3 3 2 Tetratricopeptide repeat Mad3_BUB1_I PF08311.12 BAM38704.1 - 0.00091 19.2 1.1 0.0026 17.7 1.1 1.8 1 1 0 1 1 1 1 Mad3/BUB1 homology region 1 TPR_MalT PF17874.1 BAM38704.1 - 0.0011 18.4 0.0 0.0073 15.7 0.0 2.2 2 1 0 2 2 2 1 MalT-like TPR region Clathrin PF00637.20 BAM38704.1 - 0.0073 16.2 7.2 0.061 13.2 6.0 2.4 2 0 0 2 2 2 1 Region in Clathrin and VPS TPR_15 PF13429.6 BAM38704.1 - 0.02 14.1 0.2 0.052 12.8 0.2 1.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 BAM38704.1 - 0.043 14.5 0.4 16 6.4 0.0 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat PPR PF01535.20 BAM38704.1 - 0.043 14.1 1.0 32 5.1 0.1 4.4 5 0 0 5 5 5 0 PPR repeat TPR_8 PF13181.6 BAM38704.1 - 0.1 12.8 6.2 12 6.4 0.8 4.3 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_7 PF13176.6 BAM38704.1 - 0.15 12.2 1.3 2.6 8.2 0.1 3.0 3 0 0 3 3 3 0 Tetratricopeptide repeat Cas_NE0113 PF09623.10 BAM38704.1 - 0.38 10.4 3.0 0.51 10.0 0.1 2.1 2 0 0 2 2 2 0 CRISPR-associated protein NE0113 (Cas_NE0113) TPR_12 PF13424.6 BAM38704.1 - 0.81 10.0 3.9 7 7.0 0.1 2.9 2 1 0 3 3 3 0 Tetratricopeptide repeat Vps39_1 PF10366.9 BAM38704.1 - 1.5 9.1 8.0 5 7.5 1.4 2.7 1 1 0 2 2 2 0 Vacuolar sorting protein 39 domain 1 TPR_2 PF07719.17 BAM38704.1 - 1.6 9.0 6.5 11 6.4 0.5 3.8 5 0 0 5 5 3 0 Tetratricopeptide repeat SRP_TPR_like PF17004.5 BAM38705.1 - 1.4e-09 38.0 0.6 0.00072 19.6 0.1 3.6 2 2 1 3 3 3 2 Putative TPR-like repeat TPR_19 PF14559.6 BAM38705.1 - 1.1e-05 25.9 0.6 0.53 10.8 0.0 4.4 4 1 0 4 4 4 1 Tetratricopeptide repeat ANAPC3 PF12895.7 BAM38705.1 - 7.5e-05 22.9 13.9 0.75 10.1 0.0 4.2 4 0 0 4 4 4 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_16 PF13432.6 BAM38705.1 - 0.00096 19.8 0.0 14 6.4 0.0 4.1 4 0 0 4 4 4 0 Tetratricopeptide repeat NARP1 PF12569.8 BAM38705.1 - 0.0019 17.2 2.9 0.18 10.7 0.4 2.6 2 1 0 2 2 2 2 NMDA receptor-regulated protein 1 TPR_14 PF13428.6 BAM38705.1 - 0.0068 17.1 0.0 8.1 7.6 0.0 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_7 PF13176.6 BAM38705.1 - 0.017 15.1 0.3 4.8 7.4 0.0 3.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 BAM38705.1 - 0.026 15.2 2.1 7.6 7.4 0.0 4.1 4 0 0 4 4 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 BAM38705.1 - 0.05 13.7 18.5 0.43 10.8 0.0 5.1 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_1 PF00515.28 BAM38705.1 - 0.12 12.2 9.1 2 8.4 0.5 3.6 3 0 0 3 3 3 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 BAM38705.1 - 0.21 11.7 4.9 13 6.0 0.0 4.2 4 1 1 5 5 5 0 Fis1 C-terminal tetratricopeptide repeat TPR_12 PF13424.6 BAM38705.1 - 1.4 9.2 7.0 46 4.4 0.0 4.4 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_8 PF13181.6 BAM38705.1 - 5.6 7.4 15.5 16 6.0 0.1 4.7 5 0 0 5 5 4 0 Tetratricopeptide repeat Proteasome PF00227.26 BAM38706.1 - 6e-35 120.5 0.0 7.8e-35 120.1 0.0 1.1 1 0 0 1 1 1 1 Proteasome subunit Band_7 PF01145.25 BAM38707.1 - 1.2e-22 80.7 0.8 3.8e-22 79.2 0.1 1.8 2 0 0 2 2 2 1 SPFH domain / Band 7 family Antigen_C PF16364.5 BAM38707.1 - 0.0019 18.6 0.2 0.0029 18.0 0.2 1.2 1 0 0 1 1 1 1 Cell surface antigen C-terminus YdfA_immunity PF12127.8 BAM38707.1 - 0.013 14.5 0.9 0.017 14.2 0.9 1.2 1 0 0 1 1 1 0 SigmaW regulon antibacterial Lactamase_B_2 PF12706.7 BAM38708.1 - 4.1e-16 59.1 0.0 5.4e-16 58.7 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 BAM38708.1 - 3.2e-12 46.6 0.0 4.7e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Cpn10 PF00166.21 BAM38709.1 - 2.3e-27 94.9 0.0 2.5e-27 94.8 0.0 1.0 1 0 0 1 1 1 1 Chaperonin 10 Kd subunit Pro_isomerase PF00160.21 BAM38710.1 - 8.1e-22 78.2 0.0 1.1e-21 77.8 0.0 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NifU_N PF01592.16 BAM38711.1 - 4.9e-48 162.5 0.3 8.3e-48 161.8 0.3 1.3 1 0 0 1 1 1 1 NifU-like N terminal domain RNase_P_Rpp14 PF01900.19 BAM38711.1 - 3.5e-09 36.8 1.8 7.2e-09 35.8 1.1 2.0 2 0 0 2 2 2 1 Rpp14/Pop5 family 6PGD PF00393.19 BAM38712.1 - 6.2e-86 288.4 0.7 8.6e-86 287.9 0.7 1.2 1 0 0 1 1 1 1 6-phosphogluconate dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 BAM38712.1 - 9.4e-37 126.6 0.0 1.8e-36 125.7 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase ApbA PF02558.16 BAM38712.1 - 0.00024 20.8 0.0 0.00057 19.6 0.0 1.6 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA 3HCDH_N PF02737.18 BAM38712.1 - 0.0011 18.9 0.0 0.0025 17.7 0.0 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 BAM38712.1 - 0.0015 18.5 0.0 0.008 16.2 0.0 2.1 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.17 BAM38712.1 - 0.0024 18.4 0.1 0.006 17.1 0.1 1.8 1 1 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 BAM38712.1 - 0.005 16.2 0.0 0.01 15.2 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Epimerase PF01370.21 BAM38712.1 - 0.032 13.7 0.0 5.9 6.3 0.0 2.2 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family Actin PF00022.19 BAM38713.1 - 3.9e-50 170.6 0.0 6.6e-50 169.9 0.0 1.4 1 0 0 1 1 1 1 Actin MreB_Mbl PF06723.13 BAM38713.1 - 0.0019 17.1 0.1 0.0086 14.9 0.0 1.9 2 0 0 2 2 2 1 MreB/Mbl protein FtsA PF14450.6 BAM38713.1 - 0.033 14.6 1.0 0.071 13.5 0.3 2.2 2 1 0 2 2 2 0 Cell division protein FtsA EMC3_TMCO1 PF01956.16 BAM38715.1 - 4.3 7.0 6.1 9 6.0 6.1 1.4 1 0 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like Aquarius_N PF16399.5 BAM38715.1 - 8 4.4 8.5 11 3.9 8.5 1.1 1 0 0 1 1 1 0 Intron-binding protein aquarius N-terminus Alg14 PF08660.11 BAM38716.1 - 0.0061 16.5 1.2 0.0079 16.2 0.3 1.8 2 1 0 2 2 2 1 Oligosaccharide biosynthesis protein Alg14 like MMR_HSR1 PF01926.23 BAM38717.1 - 2.6e-13 50.1 0.0 4.1e-13 49.4 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 BAM38717.1 - 3.2e-07 30.0 0.1 2.9e-06 26.9 0.1 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 BAM38717.1 - 3.7e-05 23.4 0.0 0.048 13.2 0.0 2.4 2 1 0 2 2 2 2 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 BAM38717.1 - 5.7e-05 23.2 0.1 0.014 15.4 0.0 2.2 1 1 0 2 2 2 2 Dynamin family RsgA_GTPase PF03193.16 BAM38717.1 - 0.00045 20.2 0.0 0.0033 17.4 0.0 2.2 2 1 0 2 2 2 1 RsgA GTPase IIGP PF05049.13 BAM38717.1 - 0.012 14.7 0.1 0.12 11.4 0.1 2.2 1 1 0 1 1 1 0 Interferon-inducible GTPase (IIGP) TniB PF05621.11 BAM38717.1 - 0.026 13.9 0.0 0.04 13.3 0.0 1.3 1 0 0 1 1 1 0 Bacterial TniB protein Roc PF08477.13 BAM38717.1 - 0.033 14.4 0.0 0.058 13.6 0.0 1.4 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AIG1 PF04548.16 BAM38717.1 - 0.065 12.5 0.0 0.086 12.2 0.0 1.4 1 1 0 1 1 1 0 AIG1 family AAA_29 PF13555.6 BAM38717.1 - 0.067 12.9 0.0 0.12 12.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain SRPRB PF09439.10 BAM38717.1 - 0.079 12.4 0.0 0.15 11.5 0.0 1.6 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Septin PF00735.18 BAM38717.1 - 0.15 11.3 0.0 0.23 10.7 0.0 1.3 1 0 0 1 1 1 0 Septin ABC_tran PF00005.27 BAM38717.1 - 0.16 12.5 0.0 0.23 12.0 0.0 1.3 1 0 0 1 1 1 0 ABC transporter AAA_16 PF13191.6 BAM38717.1 - 0.18 12.1 0.0 0.26 11.7 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain DUF3134 PF11332.8 BAM38718.1 - 6.6 7.1 10.7 0.56 10.6 5.4 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3134) Ribosomal_L13e PF01294.18 BAM38719.1 - 5.1e-62 208.9 4.2 6e-62 208.7 4.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L13e Ribosomal_S9 PF00380.19 BAM38720.1 - 2.3e-29 102.4 0.2 2.6e-29 102.2 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 ATP-synt PF00231.19 BAM38721.1 - 3.4e-81 273.0 3.4 3.9e-81 272.8 3.4 1.0 1 0 0 1 1 1 1 ATP synthase WD40 PF00400.32 BAM38722.1 - 5.7e-22 77.6 8.6 6.9e-07 29.9 0.1 6.1 6 0 0 6 6 6 4 WD domain, G-beta repeat LisH_TPL PF17814.1 BAM38722.1 - 8.3e-13 47.7 0.1 2.4e-12 46.3 0.1 1.9 1 0 0 1 1 1 1 LisH-like dimerisation domain ANAPC4_WD40 PF12894.7 BAM38722.1 - 4.3e-07 30.1 0.1 0.00092 19.5 0.1 3.4 3 0 0 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 BAM38722.1 - 5.1e-05 22.4 1.2 0.0098 14.9 0.0 3.4 2 1 2 4 4 4 1 WD40 region of Ge1, enhancer of mRNA-decapping protein LisH PF08513.11 BAM38722.1 - 0.041 13.9 0.0 0.083 12.9 0.0 1.6 1 0 0 1 1 1 0 LisH LRR_1 PF00560.33 BAM38722.1 - 0.11 13.1 0.1 3.3 8.6 0.0 3.3 2 0 0 2 2 2 0 Leucine Rich Repeat DUF4391 PF14335.6 BAM38722.1 - 0.11 12.1 0.1 0.24 11.1 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4391) CXCXC PF03128.14 BAM38722.1 - 0.2 12.1 0.6 0.68 10.5 0.6 1.9 1 0 0 1 1 1 0 CXCXC repeat Ndc80_HEC PF03801.13 BAM38723.1 - 4.6e-16 58.8 1.1 4.6e-16 58.8 1.1 2.4 2 1 1 3 3 3 1 HEC/Ndc80p family PI_PP_I PF18363.1 BAM38723.1 - 0.16 12.1 14.5 6.6 7.0 0.6 4.8 2 1 2 4 4 4 0 Phosphoinositide phosphatase insertion domain DUF2564 PF10819.8 BAM38723.1 - 0.45 10.9 4.1 0.59 10.5 1.1 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF2564) DUF948 PF06103.11 BAM38723.1 - 0.67 10.3 16.3 4.3 7.7 1.3 4.4 4 1 0 4 4 4 0 Bacterial protein of unknown function (DUF948) DASH_Dam1 PF08653.10 BAM38723.1 - 0.91 9.4 6.9 3.7 7.4 0.1 4.2 4 0 0 4 4 4 0 DASH complex subunit Dam1 TPR_MLP1_2 PF07926.12 BAM38723.1 - 2.9 8.0 36.1 0.71 9.9 8.3 4.4 3 1 1 4 4 4 0 TPR/MLP1/MLP2-like protein DUF1515 PF07439.11 BAM38723.1 - 5.3 7.1 5.6 25 4.9 0.5 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1515) GIT_CC PF16559.5 BAM38723.1 - 7 6.6 16.9 8.7 6.3 0.3 4.6 3 2 1 4 4 4 0 GIT coiled-coil Rho guanine nucleotide exchange factor TMF_TATA_bd PF12325.8 BAM38723.1 - 9.5 6.5 40.1 0.033 14.4 11.3 4.3 3 1 0 4 4 4 0 TATA element modulatory factor 1 TATA binding Shisa PF13908.6 BAM38724.1 - 0.00082 19.7 2.2 0.0053 17.0 2.1 2.1 1 1 0 1 1 1 1 Wnt and FGF inhibitory regulator PBP_N PF17093.5 BAM38724.1 - 0.091 13.0 2.1 0.29 11.4 1.3 1.9 2 0 0 2 2 2 0 Penicillin-binding protein N-terminus Suf PF05843.14 BAM38724.1 - 0.23 11.4 6.4 0.11 12.5 3.8 1.6 2 0 0 2 2 2 0 Suppressor of forked protein (Suf) DUF1674 PF07896.12 BAM38725.1 - 1.6e-05 25.3 0.2 4.5e-05 23.8 0.1 1.9 2 1 0 2 2 2 1 Protein of unknown function (DUF1674) ZirS_C PF16583.5 BAM38726.1 - 0.072 12.7 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 Zinc-regulated secreted antivirulence protein C-terminal domain Bromodomain PF00439.25 BAM38727.1 - 2.7e-17 62.6 0.6 6e-16 58.3 0.1 2.7 2 0 0 2 2 2 1 Bromodomain Fer2_3 PF13085.6 BAM38728.1 - 2.4e-33 114.4 0.0 2.4e-33 114.4 0.0 1.8 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_17 PF13534.6 BAM38728.1 - 3.2e-10 40.4 5.2 3.2e-10 40.4 5.2 2.1 2 1 1 3 3 3 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 BAM38728.1 - 3e-08 34.0 4.5 3e-08 34.0 4.5 2.4 1 1 1 2 2 2 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 BAM38728.1 - 1.5e-06 28.2 7.5 1.5e-06 28.2 7.5 2.2 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer2 PF00111.27 BAM38728.1 - 0.0025 17.7 0.4 0.0025 17.7 0.4 2.4 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_7 PF12838.7 BAM38728.1 - 0.0068 17.0 9.5 0.0068 17.0 9.5 3.0 2 2 1 3 3 3 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 BAM38728.1 - 0.0069 16.5 7.3 0.0069 16.5 7.3 2.7 2 1 1 3 3 3 1 4Fe-4S dicluster domain TAT_ubiq PF07706.12 BAM38728.1 - 0.16 12.2 0.1 1 9.6 0.0 2.1 2 0 0 2 2 2 0 Aminotransferase ubiquitination site Fer4_16 PF13484.6 BAM38728.1 - 0.62 11.0 15.0 2.3 9.2 0.6 3.3 3 1 1 4 4 4 0 4Fe-4S double cluster binding domain Spermine_synth PF01564.17 BAM38729.1 - 1.6e-06 27.6 1.1 7.7e-05 22.2 0.0 3.1 3 0 0 3 3 3 1 Spermine/spermidine synthase domain Latarcin PF10279.9 BAM38729.1 - 0.021 15.2 0.0 0.097 13.1 0.0 2.2 1 1 0 1 1 1 0 Latarcin precursor DEAD PF00270.29 BAM38730.1 - 6.8e-20 71.6 0.9 2.2e-16 60.1 0.1 3.6 2 1 0 2 2 2 1 DEAD/DEAH box helicase RF-1 PF00472.20 BAM38730.1 - 2.7e-15 56.3 3.3 2.7e-15 56.3 3.3 4.6 4 2 1 5 5 5 1 RF-1 domain Helicase_C PF00271.31 BAM38730.1 - 3.1e-09 37.2 0.5 3.1e-09 37.2 0.5 3.7 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM38730.1 - 0.0011 19.0 0.1 0.0011 19.0 0.1 5.1 3 2 1 4 4 4 1 Type III restriction enzyme, res subunit Methyltransf_25 PF13649.6 BAM38730.1 - 0.0018 19.0 0.0 0.0092 16.7 0.0 2.3 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 BAM38730.1 - 0.0018 19.0 0.8 0.022 15.5 0.0 3.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAM38730.1 - 0.013 15.3 0.1 0.013 15.3 0.1 3.3 3 0 0 3 3 3 0 Methyltransferase domain Methyltransf_32 PF13679.6 BAM38730.1 - 0.015 15.3 0.0 0.015 15.3 0.0 3.5 3 0 0 3 3 3 0 Methyltransferase domain AdoMet_MTase PF07757.13 BAM38730.1 - 0.074 13.4 0.0 0.26 11.6 0.0 2.1 1 0 0 1 1 1 0 Predicted AdoMet-dependent methyltransferase Phage_int_SAM_2 PF12834.7 BAM38730.1 - 0.17 12.6 4.2 0.97 10.2 4.2 2.3 1 0 0 1 1 1 0 Phage integrase, N-terminal BCIP PF13862.6 BAM38731.1 - 2.1e-40 138.7 2.7 2.1e-40 138.7 2.7 1.5 2 0 0 2 2 2 1 p21-C-terminal region-binding protein FANCI_HD1 PF14679.6 BAM38731.1 - 0.00029 20.7 0.5 0.023 14.6 0.1 2.5 2 0 0 2 2 2 2 FANCI helical domain 1 Sld5 PF05916.11 BAM38732.1 - 0.23 12.0 2.3 0.39 11.2 0.2 2.5 2 1 0 2 2 2 0 GINS complex protein CNH PF00780.22 BAM38733.1 - 6.8e-10 39.0 0.2 1.6e-09 37.8 0.2 1.6 1 0 0 1 1 1 1 CNH domain Vps39_2 PF10367.9 BAM38733.1 - 5.1e-08 33.3 0.0 2e-07 31.4 0.0 2.0 1 0 0 1 1 1 1 Vacuolar sorting protein 39 domain 2 Clathrin PF00637.20 BAM38733.1 - 0.0058 16.5 1.1 0.0058 16.5 1.1 2.3 2 0 0 2 2 2 1 Region in Clathrin and VPS YodL PF14191.6 BAM38733.1 - 0.015 16.1 0.0 0.057 14.3 0.0 2.0 1 0 0 1 1 1 0 YodL-like Read-through PF16814.5 BAM38733.1 - 0.016 15.0 0.0 0.034 14.0 0.0 1.4 1 0 0 1 1 1 0 Read-through domain EF-hand_7 PF13499.6 BAM38734.1 - 1.2e-25 89.8 7.3 8.9e-12 45.3 1.0 3.3 3 0 0 3 3 3 3 EF-hand domain pair EF-hand_1 PF00036.32 BAM38734.1 - 4.3e-13 47.8 3.5 0.0017 17.8 0.0 5.9 6 0 0 6 6 6 4 EF hand EF-hand_6 PF13405.6 BAM38734.1 - 1.3e-12 46.6 5.6 0.0039 17.0 0.3 6.0 6 0 0 6 6 6 3 EF-hand domain EF-hand_8 PF13833.6 BAM38734.1 - 8.9e-11 41.5 6.2 0.00039 20.2 0.1 5.1 3 3 3 6 6 6 4 EF-hand domain pair Erf4 PF10256.9 BAM38734.1 - 0.0021 18.2 0.5 2.3 8.4 0.2 2.8 2 1 0 2 2 2 2 Golgin subfamily A member 7/ERF4 family Utp21 PF04192.12 BAM38734.1 - 0.01 15.3 1.1 0.024 14.2 0.6 1.7 1 1 1 2 2 2 0 Utp21 specific WD40 associated putative domain EF-hand_5 PF13202.6 BAM38734.1 - 0.81 9.3 4.1 2.9 7.6 0.0 3.5 4 0 0 4 4 4 0 EF hand TMEM208_SND2 PF05620.11 BAM38735.1 - 3.5e-09 36.7 1.8 4.8e-06 26.5 2.9 3.0 2 1 0 2 2 2 1 SRP-independent targeting protein 2/TMEM208 Fis1_TPR_C PF14853.6 BAM38735.1 - 5.6e-09 35.9 3.0 8.7e-05 22.5 0.2 2.8 2 0 0 2 2 2 2 Fis1 C-terminal tetratricopeptide repeat TPR_1 PF00515.28 BAM38735.1 - 5.5e-07 29.1 3.2 0.11 12.4 0.5 3.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_2 PF07719.17 BAM38735.1 - 2.1e-06 27.4 1.4 0.089 13.0 0.1 3.7 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 BAM38735.1 - 0.01 16.3 1.2 0.12 12.9 0.3 2.6 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_11 PF13414.6 BAM38735.1 - 0.018 14.7 2.5 0.23 11.2 0.0 3.3 4 0 0 4 4 4 0 TPR repeat TPR_14 PF13428.6 BAM38735.1 - 0.022 15.5 0.4 0.16 12.9 0.1 2.6 2 1 0 2 2 2 0 Tetratricopeptide repeat TPR_8 PF13181.6 BAM38735.1 - 0.038 14.2 1.8 1.9 8.9 0.3 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_12 PF13424.6 BAM38735.1 - 0.047 14.0 1.4 1 9.7 0.0 3.0 2 1 1 3 3 3 0 Tetratricopeptide repeat ANAPC3 PF12895.7 BAM38735.1 - 0.39 11.0 3.2 1 9.6 2.9 1.9 1 1 0 1 1 1 0 Anaphase-promoting complex, cyclosome, subunit 3 Acyltransferase PF01553.21 BAM38736.1 - 1.7e-13 50.4 0.0 1.1e-12 47.7 0.0 2.2 1 1 0 1 1 1 1 Acyltransferase Reovirus_cap PF00979.17 BAM38736.1 - 0.2 10.8 0.1 0.35 10.0 0.1 1.3 1 0 0 1 1 1 0 Reovirus outer capsid protein, Sigma 3 RseC_MucC PF04246.12 BAM38736.1 - 0.22 11.5 5.5 3.9 7.4 0.0 3.2 3 1 0 3 3 3 0 Positive regulator of sigma(E), RseC/MucC Rsm22 PF09243.10 BAM38737.1 - 0.068 12.4 0.0 0.11 11.8 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial small ribosomal subunit Rsm22 Hemocyanin_M PF00372.19 BAM38739.1 - 0.031 13.5 0.1 0.035 13.3 0.1 1.1 1 0 0 1 1 1 0 Hemocyanin, copper containing domain AhpC-TSA PF00578.21 BAM38740.1 - 6e-17 61.7 0.0 8e-17 61.3 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 BAM38740.1 - 5.4e-13 48.9 0.0 6.7e-13 48.6 0.0 1.1 1 0 0 1 1 1 1 Redoxin SHS2_Rpb7-N PF03876.17 BAM38741.1 - 1e-15 57.9 0.0 1.6e-15 57.2 0.0 1.3 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 BAM38741.1 - 8.5e-10 38.9 0.0 1.4e-09 38.2 0.0 1.3 1 0 0 1 1 1 1 S1 RNA binding domain EF-hand_1 PF00036.32 BAM38743.1 - 1.5e-24 83.7 12.6 8.4e-07 28.1 1.1 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 BAM38743.1 - 9.7e-22 77.2 9.7 1.1e-10 41.8 0.2 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 BAM38743.1 - 5.4e-21 72.7 8.5 1.1e-05 25.0 0.0 4.3 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 BAM38743.1 - 2.1e-17 62.7 14.7 2.4e-08 33.7 2.1 3.7 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_9 PF14658.6 BAM38743.1 - 4.4e-09 36.5 0.7 0.00032 21.0 0.1 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_5 PF13202.6 BAM38743.1 - 2.5e-08 33.0 8.8 0.0029 17.0 0.9 3.9 4 0 0 4 4 4 2 EF hand EF-hand_4 PF12763.7 BAM38743.1 - 0.00036 20.4 7.1 0.1 12.5 0.1 3.3 1 1 2 3 3 3 2 Cytoskeletal-regulatory complex EF hand DUF1636 PF07845.11 BAM38743.1 - 0.0056 17.1 0.0 17 5.8 0.0 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1636) SurA_N_3 PF13624.6 BAM38743.1 - 0.01 15.6 1.0 0.062 13.1 0.3 2.0 2 0 0 2 2 2 0 SurA N-terminal domain Caleosin PF05042.13 BAM38743.1 - 0.014 15.3 3.4 12 5.8 0.0 3.6 1 1 3 4 4 4 0 Caleosin related protein SurA_N_2 PF13623.6 BAM38743.1 - 0.029 14.2 0.4 0.79 9.6 0.1 2.2 2 0 0 2 2 2 0 SurA N-terminal domain Tubulin_3 PF14881.6 BAM38743.1 - 0.05 13.3 1.5 0.081 12.6 1.5 1.4 1 0 0 1 1 1 0 Tubulin domain EF-hand_14 PF17959.1 BAM38743.1 - 0.21 11.9 2.4 16 6.0 0.1 2.7 2 1 0 2 2 2 0 EF-hand domain Ribosomal_L24e PF01246.20 BAM38744.1 - 0.093 13.0 0.0 0.11 12.8 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein L24e HECT PF00632.25 BAM38745.1 - 3.9e-90 302.5 0.0 8.9e-90 301.3 0.0 1.7 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) DUF913 PF06025.12 BAM38745.1 - 9.6e-41 140.0 0.0 9.6e-41 140.0 0.0 3.8 2 2 0 2 2 2 1 Domain of Unknown Function (DUF913) DUF908 PF06012.12 BAM38745.1 - 1e-26 94.2 4.3 5.4e-16 59.0 0.1 3.9 4 0 0 4 4 4 2 Domain of Unknown Function (DUF908) UBM PF14377.6 BAM38745.1 - 2.9e-08 32.9 4.6 4.4e-05 22.8 0.2 4.2 3 0 0 3 3 3 2 Ubiquitin binding region LKAAEAR PF15478.6 BAM38745.1 - 0.14 12.4 0.1 0.39 11.0 0.1 1.7 1 0 0 1 1 1 0 Family of unknown function with LKAAEAR motif Sof1 PF04158.14 BAM38747.1 - 1.2e-23 83.1 13.9 1.2e-23 83.1 13.9 2.1 2 0 0 2 2 2 1 Sof1-like domain WD40 PF00400.32 BAM38747.1 - 1.9e-20 72.8 7.5 0.0009 20.0 0.1 6.4 6 0 0 6 6 6 4 WD domain, G-beta repeat CelTOS PF18659.1 BAM38748.1 - 4.4e-49 166.0 0.1 5.5e-49 165.6 0.1 1.1 1 0 0 1 1 1 1 Cell-traversal protein for ookinetes and sporozoites RNA_pol_Rpb8 PF03870.15 BAM38749.1 - 6e-38 130.2 0.1 6.7e-38 130.0 0.1 1.0 1 0 0 1 1 1 1 RNA polymerase Rpb8 RNA_pol_RpbG PF16992.5 BAM38749.1 - 5.4e-06 26.5 0.1 0.0019 18.3 0.0 2.0 1 1 1 2 2 2 2 DNA-directed RNA polymerase, subunit G RBB1NT PF08169.11 BAM38749.1 - 0.012 15.8 0.0 0.033 14.3 0.0 1.7 2 0 0 2 2 2 0 RBB1NT (NUC162) domain Dynein_light PF01221.18 BAM38750.1 - 1.3e-36 124.7 1.2 1.5e-36 124.6 1.2 1.0 1 0 0 1 1 1 1 Dynein light chain type 1 PCI PF01399.27 BAM38751.1 - 1.8e-07 31.6 3.3 2.1e-06 28.2 0.0 3.7 3 0 0 3 3 3 1 PCI domain Pericardin_rpt PF07054.11 BAM38751.1 - 8.4e-06 25.8 13.6 0.0026 17.8 4.0 3.0 1 1 2 3 3 3 3 Pericardin like repeat S1 PF00575.23 BAM38752.1 - 7.8e-07 29.4 2.2 0.015 15.7 0.0 3.6 4 0 0 4 4 4 2 S1 RNA binding domain DUF3592 PF12158.8 BAM38752.1 - 0.12 12.4 0.0 0.28 11.2 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3592) TPR_14 PF13428.6 BAM38753.1 - 9.7e-07 29.1 0.0 0.26 12.2 0.0 4.4 4 1 1 5 5 5 2 Tetratricopeptide repeat Suf PF05843.14 BAM38753.1 - 2.1e-05 24.7 3.7 0.0035 17.4 0.4 4.1 2 1 2 4 4 4 2 Suppressor of forked protein (Suf) TPR_19 PF14559.6 BAM38753.1 - 0.00011 22.6 0.0 0.34 11.4 0.0 3.4 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 BAM38753.1 - 0.0011 19.0 0.6 40 4.8 0.0 5.2 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_15 PF13429.6 BAM38753.1 - 0.059 12.6 0.0 9.3 5.4 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_17 PF13431.6 BAM38753.1 - 0.11 13.0 0.1 2.9 8.5 0.0 3.3 4 0 0 4 4 4 0 Tetratricopeptide repeat PPR PF01535.20 BAM38753.1 - 0.31 11.4 2.8 11 6.5 0.0 3.7 4 0 0 4 4 4 0 PPR repeat PPR_2 PF13041.6 BAM38753.1 - 0.67 10.2 3.6 5.5 7.3 0.0 3.2 3 0 0 3 3 3 0 PPR repeat family RRM_1 PF00076.22 BAM38754.1 - 1.9e-14 53.2 0.0 3.8e-14 52.3 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 BAM38754.1 - 0.0054 16.8 0.0 0.014 15.5 0.0 1.7 1 1 0 1 1 1 1 RNA recognition motif DUF778 PF05608.12 BAM38754.1 - 0.72 10.2 4.0 0.32 11.4 1.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF778) zf-CCCH PF00642.24 BAM38756.1 - 1.2e-05 25.1 1.1 3.5e-05 23.6 1.1 1.9 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 BAM38756.1 - 1.8e-05 24.4 1.9 4.3e-05 23.2 1.9 1.7 1 0 0 1 1 1 1 CCCH-type zinc finger zf_CCCH_4 PF18345.1 BAM38756.1 - 0.00016 21.6 6.0 0.00042 20.3 6.0 1.8 1 0 0 1 1 1 1 Zinc finger domain WD40_like PF17005.5 BAM38756.1 - 0.0023 17.3 0.3 1.8 7.8 0.0 3.1 2 1 1 3 3 3 2 WD40-like domain Torus PF16131.5 BAM38756.1 - 0.0023 18.6 1.9 0.014 16.1 1.1 2.1 2 0 0 2 2 2 1 Torus domain RAB3GAP2_N PF14655.6 BAM38756.1 - 0.18 11.0 1.5 0.62 9.3 0.4 2.1 2 1 0 2 2 2 0 Rab3 GTPase-activating protein regulatory subunit N-terminus WD40 PF00400.32 BAM38756.1 - 0.19 12.6 8.5 3.5 8.6 0.3 5.1 5 1 0 5 5 5 0 WD domain, G-beta repeat zf-CCCH_2 PF14608.6 BAM38756.1 - 3.9 8.1 7.3 1.2 9.7 3.8 2.2 2 0 0 2 2 2 0 RNA-binding, Nab2-type zinc finger Cpn60_TCP1 PF00118.24 BAM38757.1 - 5e-150 500.4 20.1 5.7e-150 500.2 20.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Utp21 PF04192.12 BAM38758.1 - 4.9e-32 111.3 3.3 8.2e-32 110.6 3.3 1.3 1 0 0 1 1 1 1 Utp21 specific WD40 associated putative domain ANAPC4_WD40 PF12894.7 BAM38758.1 - 6.1e-10 39.3 1.3 0.44 10.9 0.0 6.5 5 2 2 7 7 7 4 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 BAM38758.1 - 0.0005 20.8 5.4 0.97 10.4 0.1 5.3 5 0 0 5 5 5 2 WD domain, G-beta repeat RAB3GAP2_N PF14655.6 BAM38758.1 - 0.36 10.1 6.1 0.78 8.9 0.2 3.6 4 0 0 4 4 4 0 Rab3 GTPase-activating protein regulatory subunit N-terminus CPSF_A PF03178.15 BAM38759.1 - 1.4e-31 110.0 2.7 4.4e-22 78.8 0.2 4.0 5 0 0 5 5 5 3 CPSF A subunit region MMS1_N PF10433.9 BAM38759.1 - 5.2e-29 101.2 1.2 1.2e-28 100.0 0.8 1.9 2 1 0 2 2 2 1 Mono-functional DNA-alkylating methyl methanesulfonate N-term Clathrin PF00637.20 BAM38760.1 - 0.0014 18.5 6.0 0.0029 17.5 0.4 3.3 2 1 0 3 3 3 1 Region in Clathrin and VPS Vps8 PF12816.7 BAM38760.1 - 0.011 15.2 1.2 7.5 6.0 0.0 3.7 3 0 0 3 3 3 0 Golgi CORVET complex core vacuolar protein 8 zf-RING_11 PF17123.5 BAM38760.1 - 0.056 13.2 0.5 0.24 11.2 0.5 2.2 1 0 0 1 1 1 0 RING-like zinc finger WD40 PF00400.32 BAM38760.1 - 0.55 11.2 3.3 1.2 10.1 0.0 3.1 3 1 0 3 3 3 0 WD domain, G-beta repeat zf-C3HC4_2 PF13923.6 BAM38760.1 - 0.83 9.5 7.9 0.34 10.8 2.8 3.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) LAS2 PF15792.5 BAM38761.1 - 0.0016 18.9 1.1 0.0057 17.2 1.1 2.0 1 0 0 1 1 1 1 Lung adenoma susceptibility protein 2 RE_Eco47II PF09553.10 BAM38763.1 - 0.056 13.0 0.2 0.13 11.8 0.2 1.6 1 0 0 1 1 1 0 Eco47II restriction endonuclease ABC_tran PF00005.27 BAM38765.1 - 2.4e-34 118.8 0.0 4.7e-34 117.9 0.0 1.5 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 BAM38765.1 - 2e-32 112.9 8.6 3e-32 112.4 8.6 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 BAM38765.1 - 2.9e-07 30.2 1.3 2.1e-05 24.1 0.2 2.8 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 BAM38765.1 - 3.1e-07 30.5 0.0 0.00038 20.4 0.0 2.4 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 BAM38765.1 - 4.4e-05 23.8 0.4 0.00074 19.8 0.2 2.7 2 1 0 2 2 1 1 AAA domain AAA_13 PF13166.6 BAM38765.1 - 0.00048 18.9 1.0 0.039 12.6 0.0 2.5 3 0 0 3 3 3 1 AAA domain AAA_16 PF13191.6 BAM38765.1 - 0.0011 19.4 0.0 0.0072 16.7 0.0 2.2 2 0 0 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 BAM38765.1 - 0.0012 18.8 0.2 0.015 15.2 0.0 2.4 2 0 0 2 2 2 1 RsgA GTPase SRP54 PF00448.22 BAM38765.1 - 0.025 14.2 0.0 0.057 13.0 0.0 1.6 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_29 PF13555.6 BAM38765.1 - 0.026 14.3 0.0 0.061 13.1 0.0 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_14 PF13173.6 BAM38765.1 - 0.034 14.2 0.1 0.44 10.6 0.0 2.8 3 0 0 3 3 3 0 AAA domain AAA_24 PF13479.6 BAM38765.1 - 0.034 13.9 0.0 0.1 12.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 BAM38765.1 - 0.041 14.4 0.0 0.13 12.9 0.0 1.9 1 0 0 1 1 1 0 AAA domain ABC_ATPase PF09818.9 BAM38765.1 - 0.048 12.5 0.0 0.96 8.2 0.0 2.2 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_33 PF13671.6 BAM38765.1 - 0.056 13.6 0.0 0.14 12.3 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 BAM38765.1 - 0.063 13.0 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 BAM38765.1 - 0.079 13.4 0.3 0.41 11.1 0.3 2.4 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TsaE PF02367.17 BAM38765.1 - 0.099 12.6 0.0 0.25 11.3 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_25 PF13481.6 BAM38765.1 - 0.14 11.7 0.0 0.31 10.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 BAM38765.1 - 0.47 10.3 4.5 6.3 6.7 0.1 3.6 4 0 0 4 4 4 0 NTPase Rgp1 PF08737.10 BAM38766.1 - 4.5e-07 29.4 1.1 0.00098 18.4 0.2 2.4 2 0 0 2 2 2 2 Rgp1 Arrestin_N PF00339.29 BAM38766.1 - 0.00013 22.0 0.7 0.0012 18.9 0.1 2.4 2 0 0 2 2 2 1 Arrestin (or S-antigen), N-terminal domain DUF5439 PF17507.2 BAM38766.1 - 0.043 14.0 3.4 0.15 12.3 0.5 3.0 3 0 0 3 3 3 0 Family of unknown function (DUF5439) Laminin_G_3 PF13385.6 BAM38767.1 - 1.4e-20 74.0 0.0 2.2e-20 73.4 0.0 1.3 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily Laminin_G_2 PF02210.24 BAM38767.1 - 0.059 14.0 0.0 0.12 12.9 0.0 1.5 1 0 0 1 1 1 0 Laminin G domain Thg1 PF04446.12 BAM38768.1 - 1.5e-43 147.8 0.2 2.6e-43 147.0 0.2 1.4 1 0 0 1 1 1 1 tRNAHis guanylyltransferase Thg1C PF14413.6 BAM38768.1 - 3.6e-36 124.0 1.0 3.6e-36 124.0 1.0 1.7 2 0 0 2 2 2 1 Thg1 C terminal domain MBOAT PF03062.19 BAM38769.1 - 7.3e-20 71.6 23.1 1.1e-19 71.1 23.1 1.2 1 0 0 1 1 1 1 MBOAT, membrane-bound O-acyltransferase family MBOAT_2 PF13813.6 BAM38769.1 - 0.00087 19.5 1.7 0.00087 19.5 1.7 2.3 2 0 0 2 2 2 1 Membrane bound O-acyl transferase family CENP-F_leu_zip PF10473.9 BAM38770.1 - 0.00094 19.2 58.3 0.0054 16.8 1.6 6.0 2 1 4 6 6 6 3 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 APC_N_CC PF16689.5 BAM38770.1 - 0.0011 19.0 1.3 0.0011 19.0 1.3 5.6 4 2 2 6 6 6 1 Coiled-coil N-terminus of APC, dimerisation domain TPR_MLP1_2 PF07926.12 BAM38770.1 - 0.0047 17.0 9.2 0.0047 17.0 9.2 6.6 4 2 0 5 5 5 2 TPR/MLP1/MLP2-like protein DUF4201 PF13870.6 BAM38770.1 - 0.0084 15.9 43.7 0.012 15.4 16.6 5.0 2 1 2 4 4 4 1 Domain of unknown function (DUF4201) FlxA PF14282.6 BAM38770.1 - 0.0085 16.1 8.2 0.0085 16.1 8.2 4.1 3 1 1 5 5 5 1 FlxA-like protein DUF4407 PF14362.6 BAM38770.1 - 0.096 12.0 28.3 5.1 6.4 15.2 3.6 1 1 2 3 3 3 0 Domain of unknown function (DUF4407) Cep57_CLD_2 PF14197.6 BAM38770.1 - 0.098 12.8 0.4 0.098 12.8 0.4 7.7 4 2 3 7 7 5 0 Centrosome localisation domain of PPC89 TolA_bind_tri PF16331.5 BAM38770.1 - 0.13 12.3 0.2 0.13 12.3 0.2 6.4 6 1 2 8 8 7 0 TolA binding protein trimerisation DUF3287 PF11690.8 BAM38770.1 - 0.19 11.4 4.6 0.27 11.0 1.3 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3287) Spc7 PF08317.11 BAM38770.1 - 0.22 10.4 50.6 0.14 11.1 8.1 4.9 2 1 3 5 5 5 0 Spc7 kinetochore protein DUF745 PF05335.13 BAM38770.1 - 6.5 6.4 29.4 0.77 9.5 5.1 4.6 1 1 3 4 4 4 0 Protein of unknown function (DUF745) HMMR_N PF15905.5 BAM38770.1 - 7.7 5.9 49.9 0.4 10.1 24.7 3.0 2 1 1 3 3 3 0 Hyaluronan mediated motility receptor N-terminal ATG16 PF08614.11 BAM38770.1 - 9.8 6.3 57.6 0.41 10.8 28.7 4.1 1 1 3 4 4 4 0 Autophagy protein 16 (ATG16) mRNA_triPase PF02940.15 BAM38771.1 - 3.8e-43 147.7 2.6 5.8e-43 147.2 2.6 1.2 1 0 0 1 1 1 1 mRNA capping enzyme, beta chain SPOR PF05036.13 BAM38771.1 - 0.065 13.6 0.0 1.2 9.6 0.0 2.3 2 0 0 2 2 2 0 Sporulation related domain Pro_isomerase PF00160.21 BAM38772.1 - 1.4e-47 161.9 0.1 1.7e-47 161.6 0.1 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CCDC32 PF14989.6 BAM38773.1 - 0.015 15.3 1.4 0.048 13.7 0.2 2.1 1 1 1 2 2 2 0 Coiled-coil domain containing 32 2-oxoacid_dh PF00198.23 BAM38774.1 - 2.2e-78 262.9 0.1 2.7e-78 262.6 0.1 1.1 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 BAM38774.1 - 2e-16 59.6 1.1 3.3e-16 58.9 1.1 1.4 1 0 0 1 1 1 1 Biotin-requiring enzyme GSH_synth_ATP PF03917.17 BAM38776.1 - 3.2e-54 184.1 0.0 4.1e-54 183.8 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 BAM38776.1 - 1.9e-15 57.2 0.0 4.4e-15 56.0 0.0 1.7 1 0 0 1 1 1 1 Eukaryotic glutathione synthase GSH_synth_ATP PF03917.17 BAM38777.1 - 1.1e-51 175.8 0.0 1.4e-51 175.5 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic glutathione synthase, ATP binding domain GSH_synthase PF03199.15 BAM38777.1 - 1.9e-14 53.9 0.5 4.3e-14 52.8 0.0 1.8 2 0 0 2 2 2 1 Eukaryotic glutathione synthase Prefoldin_2 PF01920.20 BAM38779.1 - 8e-15 54.7 8.1 9.1e-15 54.5 8.1 1.1 1 0 0 1 1 1 1 Prefoldin subunit Prefoldin_3 PF13758.6 BAM38779.1 - 0.0014 18.6 1.6 0.0025 17.8 1.4 1.7 1 1 0 1 1 1 1 Prefoldin subunit DUF3584 PF12128.8 BAM38779.1 - 0.0017 16.0 2.7 0.0019 15.8 2.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) FliD_C PF07195.12 BAM38779.1 - 0.035 13.5 4.5 0.056 12.9 4.6 1.4 1 1 0 1 1 1 0 Flagellar hook-associated protein 2 C-terminus DASH_Dam1 PF08653.10 BAM38779.1 - 0.056 13.2 0.4 8.5 6.3 0.1 2.3 2 0 0 2 2 2 0 DASH complex subunit Dam1 DUF4407 PF14362.6 BAM38779.1 - 0.09 12.1 1.3 0.1 11.9 1.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) COG5 PF10392.9 BAM38779.1 - 0.096 12.9 0.4 0.096 12.9 0.4 1.9 1 1 1 2 2 2 0 Golgi transport complex subunit 5 DUF948 PF06103.11 BAM38779.1 - 0.11 12.8 0.4 0.11 12.8 0.4 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) SKA2 PF16740.5 BAM38779.1 - 0.12 12.1 4.8 0.93 9.3 0.6 2.1 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 2 Tup_N PF08581.10 BAM38779.1 - 0.18 12.1 4.2 0.69 10.3 0.2 2.2 2 0 0 2 2 2 0 Tup N-terminal Prefoldin PF02996.17 BAM38779.1 - 0.28 11.1 6.3 1.1 9.2 6.4 2.0 1 1 0 1 1 1 0 Prefoldin subunit Spc7 PF08317.11 BAM38779.1 - 0.63 8.9 8.0 1.2 8.0 8.0 1.4 1 1 0 1 1 1 0 Spc7 kinetochore protein DivIC PF04977.15 BAM38779.1 - 0.91 9.3 6.1 1.4 8.8 0.4 2.4 2 1 0 2 2 2 0 Septum formation initiator Hemagglutinin PF00509.18 BAM38779.1 - 1.1 7.6 5.5 0.49 8.7 0.4 1.9 1 1 1 2 2 2 0 Haemagglutinin DUF948 PF06103.11 BAM38780.1 - 0.0022 18.2 0.3 0.006 16.8 0.0 1.7 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF948) PP_kinase_N PF13089.6 BAM38780.1 - 0.026 14.8 0.1 0.04 14.2 0.1 1.3 1 0 0 1 1 1 0 Polyphosphate kinase N-terminal domain Dus PF01207.17 BAM38781.1 - 2.9e-63 213.8 0.0 4.1e-63 213.3 0.0 1.2 1 0 0 1 1 1 1 Dihydrouridine synthase (Dus) His_biosynth PF00977.21 BAM38781.1 - 0.0036 16.8 0.0 0.0083 15.6 0.0 1.6 1 1 0 1 1 1 1 Histidine biosynthesis protein CGI-121 PF08617.10 BAM38784.1 - 7.7e-17 61.9 0.6 9.8e-17 61.5 0.6 1.2 1 0 0 1 1 1 1 Kinase binding protein CGI-121 MORN PF02493.20 BAM38785.1 - 3.4e-27 92.7 45.7 0.00012 21.8 0.1 12.4 12 0 0 12 12 12 8 MORN repeat Avl9 PF09794.9 BAM38785.1 - 0.0019 17.0 0.0 0.011 14.5 0.0 1.9 1 1 1 2 2 2 1 Transport protein Avl9 Avl9 PF09794.9 BAM38786.1 - 1.1e-09 37.5 0.8 5.8e-07 28.5 0.1 2.4 2 0 0 2 2 2 2 Transport protein Avl9 Zip PF02535.22 BAM38786.1 - 0.001 18.4 0.5 0.001 18.4 0.5 1.7 2 0 0 2 2 2 1 ZIP Zinc transporter Connexin PF00029.19 BAM38786.1 - 0.0016 18.3 1.5 0.0016 18.3 1.5 1.6 2 0 0 2 2 2 1 Connexin RR_TM4-6 PF06459.12 BAM38786.1 - 0.0043 16.9 4.1 0.0043 16.9 4.1 2.3 2 0 0 2 2 2 1 Ryanodine Receptor TM 4-6 RPN2_C PF18004.1 BAM38786.1 - 0.0043 17.0 8.3 0.0043 17.0 8.3 2.4 2 0 0 2 2 2 1 26S proteasome regulatory subunit RPN2 C-terminal domain RNA_pol_Rpc4 PF05132.14 BAM38786.1 - 0.0064 16.9 0.5 0.0064 16.9 0.5 2.5 2 1 0 2 2 1 1 RNA polymerase III RPC4 TERB2 PF15101.6 BAM38786.1 - 0.03 14.4 0.7 0.03 14.4 0.7 2.2 2 0 0 2 2 2 0 Telomere-associated protein TERB2 DcuC PF03606.15 BAM38786.1 - 0.036 12.5 0.1 0.15 10.5 0.1 1.8 1 1 0 1 1 1 0 C4-dicarboxylate anaerobic carrier Presenilin PF01080.17 BAM38786.1 - 0.097 11.4 7.8 0.032 13.0 0.9 2.1 2 0 0 2 2 2 0 Presenilin SLC12 PF03522.15 BAM38786.1 - 0.15 11.1 6.8 0.085 11.9 0.4 2.1 2 0 0 2 2 2 0 Solute carrier family 12 FancD2 PF14631.6 BAM38786.1 - 0.16 9.4 2.9 0.26 8.6 2.9 1.3 1 0 0 1 1 1 0 Fanconi anaemia protein FancD2 nuclease Vfa1 PF08432.10 BAM38786.1 - 0.71 10.2 21.2 0.031 14.6 11.0 2.3 2 0 0 2 2 2 0 AAA-ATPase Vps4-associated protein 1 O-antigen_lig PF13425.6 BAM38786.1 - 0.78 8.5 2.4 1.4 7.6 2.4 1.4 1 0 0 1 1 1 0 O-antigen ligase like membrane protein PTPRCAP PF15713.5 BAM38786.1 - 1 9.6 13.4 0.038 14.3 4.5 2.3 2 0 0 2 2 2 0 Protein tyrosine phosphatase receptor type C-associated DUF913 PF06025.12 BAM38786.1 - 1.1 8.2 6.9 0.12 11.4 0.4 2.0 2 0 0 2 2 2 0 Domain of Unknown Function (DUF913) TFB6 PF17110.5 BAM38786.1 - 2.2 8.0 7.8 0.28 10.9 2.7 2.1 2 0 0 2 2 2 0 Subunit 11 of the general transcription factor TFIIH DUF2370 PF10176.9 BAM38786.1 - 2.8 7.5 5.6 0.58 9.8 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2370) GNAT_acetyltr_2 PF13718.6 BAM38786.1 - 3.8 6.8 7.2 0.29 10.5 1.7 1.8 2 0 0 2 2 2 0 GNAT acetyltransferase 2 CLN3 PF02487.17 BAM38786.1 - 3.9 6.4 5.6 0.29 10.1 0.5 1.6 2 0 0 2 2 2 0 CLN3 protein Peptidase_S49_N PF08496.10 BAM38786.1 - 4.1 7.5 8.9 0.61 10.1 4.4 1.9 2 0 0 2 2 2 0 Peptidase family S49 N-terminal Gti1_Pac2 PF09729.9 BAM38786.1 - 4.4 7.4 12.3 0.56 10.3 3.1 2.3 2 0 0 2 2 2 0 Gti1/Pac2 family AAA_11 PF13086.6 BAM38786.1 - 6.5 6.5 9.4 0.28 10.9 2.1 2.0 2 0 0 2 2 2 0 AAA domain TCTP PF00838.17 BAM38787.1 - 3.5e-51 173.8 1.9 4e-51 173.7 1.9 1.0 1 0 0 1 1 1 1 Translationally controlled tumour protein GTP_EFTU PF00009.27 BAM38789.1 - 5.5e-60 202.3 0.0 9.8e-60 201.4 0.0 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 BAM38789.1 - 1.8e-39 134.2 0.2 3.2e-38 130.2 0.1 2.7 3 0 0 3 3 3 1 Elongation factor G, domain IV EFG_C PF00679.24 BAM38789.1 - 4.4e-28 97.1 0.1 1.9e-26 91.9 0.0 2.7 2 0 0 2 2 2 1 Elongation factor G C-terminus EFG_II PF14492.6 BAM38789.1 - 2.1e-26 91.8 0.0 4.4e-26 90.8 0.0 1.6 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 BAM38789.1 - 1e-13 51.4 0.2 3.7e-13 49.6 0.2 2.1 1 0 0 1 1 1 1 Elongation factor Tu domain 2 RF3_C PF16658.5 BAM38789.1 - 0.021 14.6 0.0 0.049 13.4 0.0 1.5 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain Ribosomal_S17 PF00366.20 BAM38789.1 - 0.04 14.0 0.4 0.15 12.2 0.4 2.0 1 0 0 1 1 1 0 Ribosomal protein S17 MMR_HSR1 PF01926.23 BAM38789.1 - 0.092 12.8 0.0 0.26 11.4 0.0 1.8 1 0 0 1 1 1 0 50S ribosome-binding GTPase MMR_HSR1_Xtn PF16897.5 BAM38790.1 - 3.6e-43 145.9 0.3 5.7e-43 145.3 0.3 1.3 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain MMR_HSR1 PF01926.23 BAM38790.1 - 6.2e-23 81.0 0.0 1.4e-22 79.9 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase TGS PF02824.21 BAM38790.1 - 2.6e-20 72.2 0.0 4.3e-20 71.5 0.0 1.4 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 BAM38790.1 - 5.6e-12 45.5 0.0 1.3e-11 44.3 0.0 1.6 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 BAM38790.1 - 5.5e-06 26.5 0.2 0.044 13.9 0.0 2.3 1 1 1 2 2 2 2 Dynamin family MeaB PF03308.16 BAM38790.1 - 0.00095 18.2 0.2 0.0023 17.0 0.1 1.6 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB GTP_EFTU PF00009.27 BAM38790.1 - 0.004 16.7 0.5 1.3 8.5 0.0 3.7 2 2 1 3 3 3 1 Elongation factor Tu GTP binding domain AIG1 PF04548.16 BAM38790.1 - 0.0063 15.9 0.1 0.0087 15.4 0.1 1.3 1 0 0 1 1 1 1 AIG1 family SRPRB PF09439.10 BAM38790.1 - 0.047 13.1 0.1 0.086 12.3 0.1 1.4 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit TFIID_30kDa PF03540.13 BAM38791.1 - 0.015 15.2 0.0 0.024 14.6 0.0 1.3 1 0 0 1 1 1 0 Transcription initiation factor TFIID 23-30kDa subunit SET PF00856.28 BAM38792.1 - 5.1e-12 46.5 0.4 2.1e-10 41.2 0.0 3.2 2 1 0 2 2 2 1 SET domain HEAT PF02985.22 BAM38794.1 - 1.6e-15 55.9 9.1 0.035 14.3 0.0 9.8 10 0 0 10 10 10 4 HEAT repeat Vac14_Fab1_bd PF12755.7 BAM38794.1 - 7.3e-13 48.9 2.9 0.014 15.9 0.0 7.0 4 1 3 7 7 7 3 Vacuolar 14 Fab1-binding region Importin_rep_4 PF18808.1 BAM38794.1 - 8.8e-12 45.2 4.1 1.1e-11 44.8 0.1 3.4 4 0 0 4 4 4 1 Importin repeat HEAT_2 PF13646.6 BAM38794.1 - 1.1e-10 41.8 0.1 0.0048 17.2 0.0 7.5 5 2 5 10 10 10 4 HEAT repeats HEAT_EZ PF13513.6 BAM38794.1 - 1.1e-08 35.4 2.9 0.68 10.5 0.0 8.7 6 2 3 9 9 9 3 HEAT-like repeat DUF3385 PF11865.8 BAM38794.1 - 2.6e-07 30.7 17.0 0.014 15.3 0.0 7.4 8 1 1 9 9 9 3 Domain of unknown function (DUF3385) RTP1_C1 PF10363.9 BAM38794.1 - 0.0062 16.7 1.4 1.4 9.1 0.0 5.2 4 2 2 6 6 6 1 Required for nuclear transport of RNA pol II C-terminus 1 WD40 PF00400.32 BAM38795.1 - 0.0051 17.6 0.7 1.8 9.6 0.0 3.4 3 0 0 3 3 3 2 WD domain, G-beta repeat Phage_Treg PF04761.12 BAM38795.1 - 0.82 9.8 2.9 29 4.9 0.0 3.2 2 1 0 2 2 2 0 Lactococcus bacteriophage putative transcription regulator RRM_1 PF00076.22 BAM38796.1 - 1.5e-12 47.2 0.0 2.7e-05 23.9 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 BAM38796.1 - 0.051 13.4 0.1 0.098 12.5 0.1 1.4 1 0 0 1 1 1 0 Occluded RNA-recognition motif SMC_N PF02463.19 BAM38797.1 - 9.1e-49 165.9 7.4 4e-48 163.7 7.4 2.3 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.13 BAM38797.1 - 1.7e-23 83.1 0.0 5e-23 81.6 0.0 1.9 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_21 PF13304.6 BAM38797.1 - 1.4e-11 44.8 13.5 1.1e-07 32.0 2.0 3.5 2 2 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 BAM38797.1 - 1.7e-10 41.8 21.8 1.7e-10 41.8 21.8 6.8 3 2 2 5 5 3 1 AAA domain AAA_29 PF13555.6 BAM38797.1 - 3.8e-08 33.0 0.0 1.1e-07 31.4 0.0 1.8 1 0 0 1 1 1 1 P-loop containing region of AAA domain APG6_N PF17675.1 BAM38797.1 - 5e-07 30.3 94.2 0.0077 16.8 9.2 7.0 4 1 0 5 5 5 4 Apg6 coiled-coil region ADIP PF11559.8 BAM38797.1 - 9e-07 29.1 5.7 9e-07 29.1 5.7 8.2 6 3 3 9 9 7 2 Afadin- and alpha -actinin-Binding Spc7 PF08317.11 BAM38797.1 - 2.9e-06 26.4 96.7 0.0012 17.8 9.8 6.9 3 2 4 7 7 7 4 Spc7 kinetochore protein AAA_15 PF13175.6 BAM38797.1 - 5.2e-06 26.4 34.5 5.2e-06 26.4 34.5 4.3 3 1 1 4 4 3 1 AAA ATPase domain FPP PF05911.11 BAM38797.1 - 2.2e-05 22.9 23.7 2.2e-05 22.9 23.7 3.7 3 1 0 3 3 3 2 Filament-like plant protein, long coiled-coil UPF0242 PF06785.11 BAM38797.1 - 0.00067 19.8 5.6 0.00067 19.8 5.6 6.4 4 1 2 6 6 4 1 Uncharacterised protein family (UPF0242) N-terminus YscO PF07321.12 BAM38797.1 - 0.00083 19.3 5.6 0.00083 19.3 5.6 7.6 6 3 1 7 7 7 1 Type III secretion protein YscO DUF1664 PF07889.12 BAM38797.1 - 0.0028 17.7 0.4 0.0028 17.7 0.4 7.8 5 3 3 9 9 9 4 Protein of unknown function (DUF1664) Collagen PF01391.18 BAM38797.1 - 0.0032 17.2 3.4 0.0065 16.2 3.4 1.4 1 0 0 1 1 1 1 Collagen triple helix repeat (20 copies) ATG16 PF08614.11 BAM38797.1 - 0.005 17.1 8.1 0.005 17.1 8.1 6.4 4 2 0 5 5 5 2 Autophagy protein 16 (ATG16) DUF3450 PF11932.8 BAM38797.1 - 0.0053 16.1 3.4 0.0053 16.1 3.4 7.5 6 2 0 6 6 6 2 Protein of unknown function (DUF3450) GAS PF13851.6 BAM38797.1 - 0.008 15.6 103.2 0.0083 15.5 3.6 7.1 5 1 2 7 7 7 4 Growth-arrest specific micro-tubule binding Fez1 PF06818.15 BAM38797.1 - 0.0099 16.3 11.0 0.0099 16.3 11.0 6.7 4 2 0 5 5 4 3 Fez1 SbcCD_C PF13558.6 BAM38797.1 - 0.016 15.4 0.2 0.18 12.1 0.0 2.7 1 1 1 2 2 2 0 Putative exonuclease SbcCD, C subunit Pox_A_type_inc PF04508.12 BAM38797.1 - 0.043 13.7 0.2 0.043 13.7 0.2 5.0 6 0 0 6 6 3 0 Viral A-type inclusion protein repeat ABC_tran PF00005.27 BAM38797.1 - 0.051 14.1 0.0 0.051 14.1 0.0 5.2 4 3 1 5 5 4 0 ABC transporter Filament PF00038.21 BAM38797.1 - 0.12 12.0 92.4 0.1 12.1 8.2 7.4 3 2 2 6 6 6 0 Intermediate filament protein DUF16 PF01519.16 BAM38797.1 - 1.7 9.2 60.0 1.1 9.7 7.4 6.6 5 2 1 6 6 6 0 Protein of unknown function DUF16 HAUS-augmin3 PF14932.6 BAM38797.1 - 1.7 8.2 69.8 0.042 13.4 4.4 6.2 5 1 1 6 6 6 0 HAUS augmin-like complex subunit 3 AAA_13 PF13166.6 BAM38797.1 - 2.1 6.9 92.4 0.053 12.2 5.0 6.2 4 2 2 6 6 6 0 AAA domain MqsA_antitoxin PF15731.5 BAM38797.1 - 2.9 8.0 8.1 3.6 7.7 0.1 3.6 3 0 0 3 3 3 0 Antitoxin component of bacterial toxin-antitoxin system, MqsA Ufm1 PF03671.14 BAM38798.1 - 1.9e-29 101.5 0.1 2.2e-29 101.3 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin fold modifier 1 protein DUF3510 PF12022.8 BAM38799.1 - 1.1e-16 61.3 9.1 6.7e-16 58.8 1.9 3.3 3 0 0 3 3 3 2 Domain of unknown function (DUF3510) UBA_e1_thiolCys PF10585.9 BAM38799.1 - 0.083 12.8 4.7 0.15 12.0 0.1 3.0 3 0 0 3 3 3 0 Ubiquitin-activating enzyme active site Ribosomal_L23 PF00276.20 BAM38799.1 - 0.12 12.8 0.0 0.52 10.7 0.0 2.1 1 0 0 1 1 1 0 Ribosomal protein L23 TagF_N PF09867.9 BAM38799.1 - 0.19 11.8 0.0 23 5.0 0.0 2.6 2 0 0 2 2 2 0 TagF N-terminal domain, Type VI secretion system-associated AAA PF00004.29 BAM38800.1 - 1.8e-41 141.6 0.2 1.2e-40 139.0 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Prot_ATP_ID_OB PF16450.5 BAM38800.1 - 5.6e-18 64.6 0.3 1.4e-17 63.3 0.3 1.7 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_lid_3 PF17862.1 BAM38800.1 - 5.9e-11 42.0 0.1 1.3e-10 40.9 0.1 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 BAM38800.1 - 1.4e-06 28.4 0.2 1.3e-05 25.2 0.1 2.6 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 BAM38800.1 - 1.7e-05 25.3 0.2 0.0038 17.6 0.0 2.5 1 1 1 2 2 2 1 AAA ATPase domain AAA_2 PF07724.14 BAM38800.1 - 2.1e-05 24.7 0.5 0.00011 22.3 0.0 2.4 2 1 0 2 2 2 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 BAM38800.1 - 7.4e-05 22.6 0.0 0.00017 21.4 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_33 PF13671.6 BAM38800.1 - 0.00062 20.0 0.0 0.0013 18.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 BAM38800.1 - 0.002 17.6 0.2 0.021 14.2 0.1 2.6 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI AAA_22 PF13401.6 BAM38800.1 - 0.005 17.1 6.2 0.036 14.3 0.1 3.1 2 2 2 4 4 3 1 AAA domain PhoH PF02562.16 BAM38800.1 - 0.027 13.9 0.4 0.056 12.9 0.0 1.7 2 0 0 2 2 2 0 PhoH-like protein IstB_IS21 PF01695.17 BAM38800.1 - 0.03 14.1 0.0 0.057 13.1 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_11 PF13086.6 BAM38800.1 - 0.033 14.0 0.9 0.14 11.9 0.0 2.1 2 0 0 2 2 2 0 AAA domain AAA_14 PF13173.6 BAM38800.1 - 0.043 13.8 0.0 0.11 12.5 0.0 1.7 1 0 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 BAM38800.1 - 0.056 13.2 0.1 0.38 10.4 0.0 2.3 2 1 0 2 2 2 0 Sigma-54 interaction domain CPT PF07931.12 BAM38800.1 - 0.088 12.6 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein AAA_19 PF13245.6 BAM38800.1 - 0.097 13.0 0.0 0.19 12.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 BAM38800.1 - 0.28 10.5 3.0 0.28 10.5 0.0 2.3 3 0 0 3 3 3 0 KaiC DUF2981 PF11200.8 BAM38801.1 - 1.5e-158 527.9 0.0 1.7e-158 527.7 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF2981) HAGH_C PF16123.5 BAM38802.1 - 5.5e-17 62.0 0.0 1.1e-16 61.0 0.0 1.5 1 0 0 1 1 1 1 Hydroxyacylglutathione hydrolase C-terminus Lactamase_B PF00753.27 BAM38802.1 - 2.3e-05 24.5 0.6 0.00067 19.7 0.6 2.2 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Ribosomal_L38e PF01781.18 BAM38803.1 - 1.5e-22 79.4 1.7 1.7e-22 79.3 1.7 1.0 1 0 0 1 1 1 1 Ribosomal L38e protein family RL10P_insert PF17777.1 BAM38804.1 - 3.2e-21 75.1 0.1 5.8e-21 74.3 0.1 1.5 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_L10 PF00466.20 BAM38804.1 - 1.4e-18 66.8 0.1 2.7e-18 65.9 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein L10 Ribosomal_60s PF00428.19 BAM38804.1 - 1.4e-14 54.4 2.1 2.7e-14 53.5 2.1 1.5 1 0 0 1 1 1 1 60s Acidic ribosomal protein ATG16 PF08614.11 BAM38805.1 - 0.00033 20.9 5.1 0.00033 20.9 5.1 5.2 4 2 1 6 6 6 2 Autophagy protein 16 (ATG16) YabA PF06156.13 BAM38805.1 - 0.012 16.2 0.4 0.012 16.2 0.4 6.9 5 3 1 6 6 6 0 Initiation control protein YabA HrpB7 PF09486.10 BAM38805.1 - 0.3 11.4 6.0 0.055 13.9 0.6 2.4 2 0 0 2 2 2 0 Bacterial type III secretion protein (HrpB7) UPF0242 PF06785.11 BAM38805.1 - 1.8 8.6 60.3 0.67 10.0 21.5 5.4 3 2 1 4 4 4 0 Uncharacterised protein family (UPF0242) N-terminus DUF4598 PF15370.6 BAM38806.1 - 1.2e-05 25.7 0.1 1.8e-05 25.2 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4598) EF-hand_8 PF13833.6 BAM38807.1 - 0.00034 20.4 0.1 0.11 12.3 0.0 2.4 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 BAM38807.1 - 0.0038 17.0 0.1 2.6 8.2 0.0 2.7 2 1 0 2 2 2 2 EF-hand domain EF-hand_1 PF00036.32 BAM38807.1 - 0.08 12.5 0.2 8.6 6.2 0.0 3.3 4 0 0 4 4 4 0 EF hand EF-hand_7 PF13499.6 BAM38807.1 - 0.1 13.0 0.0 1.7 9.2 0.0 2.4 1 1 0 1 1 1 0 EF-hand domain pair MMR_HSR1 PF01926.23 BAM38808.1 - 1.3e-20 73.6 0.0 2.6e-20 72.6 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase DUF1967 PF09269.11 BAM38808.1 - 2.1e-15 56.4 0.1 4.5e-15 55.3 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1967) Dynamin_N PF00350.23 BAM38808.1 - 6e-09 36.2 0.9 7e-09 36.0 0.1 1.5 2 0 0 2 2 2 1 Dynamin family FeoB_N PF02421.18 BAM38808.1 - 2.3e-08 33.7 0.0 1.1e-05 25.0 0.0 2.8 2 1 0 2 2 2 2 Ferrous iron transport protein B AAA_18 PF13238.6 BAM38808.1 - 0.028 15.0 0.7 0.34 11.5 0.0 2.4 3 0 0 3 3 3 0 AAA domain RsgA_GTPase PF03193.16 BAM38808.1 - 0.03 14.2 0.9 0.55 10.1 0.0 2.5 2 1 0 2 2 2 0 RsgA GTPase MMR_HSR1_Xtn PF16897.5 BAM38808.1 - 0.045 13.8 0.1 0.091 12.8 0.1 1.6 1 0 0 1 1 1 0 C-terminal region of MMR_HSR1 domain cobW PF02492.19 BAM38808.1 - 0.069 12.7 0.0 0.28 10.8 0.0 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.9 BAM38808.1 - 0.13 12.0 0.0 0.96 9.2 0.0 2.1 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation U-box PF04564.15 BAM38809.1 - 4.7e-25 87.6 0.3 1.5e-24 86.0 0.0 2.0 2 0 0 2 2 2 1 U-box domain TPR_2 PF07719.17 BAM38809.1 - 1.3e-10 40.5 5.5 0.0014 18.6 0.0 3.8 4 0 0 4 4 3 3 Tetratricopeptide repeat TPR_1 PF00515.28 BAM38809.1 - 3.7e-10 39.2 3.0 0.00077 19.2 0.1 3.6 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 BAM38809.1 - 1.2e-08 34.5 0.2 0.0042 16.7 0.0 2.8 2 0 0 2 2 2 2 TPR repeat TPR_17 PF13431.6 BAM38809.1 - 1.2e-06 28.5 0.9 0.00065 19.9 0.0 3.3 3 0 0 3 3 2 1 Tetratricopeptide repeat ANAPC3 PF12895.7 BAM38809.1 - 1.9e-06 28.0 0.2 3.6e-06 27.1 0.2 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 zf-NOSIP PF15906.5 BAM38809.1 - 1.2e-05 25.4 0.0 2.9e-05 24.1 0.0 1.6 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein TPR_16 PF13432.6 BAM38809.1 - 1.9e-05 25.2 0.0 0.12 13.0 0.0 2.4 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_12 PF13424.6 BAM38809.1 - 0.00016 21.9 0.2 0.028 14.7 0.1 2.3 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 BAM38809.1 - 0.00068 19.7 2.4 0.44 10.9 0.0 4.0 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_19 PF14559.6 BAM38809.1 - 0.0038 17.7 0.0 0.51 10.9 0.0 2.8 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_15 PF13429.6 BAM38809.1 - 0.018 14.3 0.1 0.035 13.3 0.0 1.4 1 1 0 1 1 1 0 Tetratricopeptide repeat SF-assemblin PF06705.11 BAM38809.1 - 0.019 14.3 2.7 0.032 13.6 2.7 1.4 1 0 0 1 1 1 0 SF-assemblin/beta giardin TPR_14 PF13428.6 BAM38809.1 - 0.052 14.4 0.0 8.9 7.4 0.0 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 BAM38809.1 - 0.19 12.5 1.0 5.6 7.8 0.0 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat NAD_Gly3P_dh_N PF01210.23 BAM38810.1 - 7.9e-43 146.1 0.2 1.1e-42 145.6 0.2 1.2 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_Gly3P_dh_C PF07479.14 BAM38810.1 - 5.9e-42 143.3 0.1 1.1e-41 142.4 0.1 1.5 1 0 0 1 1 1 1 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus Pkinase PF00069.25 BAM38811.1 - 2e-47 161.8 1.2 2e-47 161.8 1.2 2.4 2 1 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM38811.1 - 1.4e-24 86.8 0.6 3.6e-24 85.5 0.2 1.8 2 0 0 2 2 2 1 Protein tyrosine kinase Rieske_2 PF13806.6 BAM38812.1 - 0.019 14.9 0.0 0.026 14.5 0.0 1.2 1 0 0 1 1 1 0 Rieske-like [2Fe-2S] domain LAGLIDADG_WhiA PF14527.6 BAM38813.1 - 0.13 12.3 0.4 7.4 6.7 0.1 2.3 2 0 0 2 2 2 0 WhiA LAGLIDADG-like domain TcdB_N PF12918.7 BAM38813.1 - 10 6.5 9.0 1.3 9.4 0.5 2.7 3 0 0 3 3 3 0 TcdB toxin N-terminal helical domain ECR1_N PF14382.6 BAM38815.1 - 2.6e-08 33.5 0.1 5.4e-08 32.5 0.1 1.6 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region EXOSC1 PF10447.9 BAM38815.1 - 5.1e-05 23.9 0.2 0.032 14.8 0.0 2.5 2 1 1 3 3 3 2 Exosome component EXOSC1/CSL4 RRM_1 PF00076.22 BAM38816.1 - 0.00071 19.3 0.1 0.077 12.8 0.1 2.5 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DnaJ PF00226.31 BAM38817.1 - 5.4e-17 61.7 0.4 1.2e-16 60.6 0.4 1.6 1 0 0 1 1 1 1 DnaJ domain ELM2 PF01448.24 BAM38818.1 - 9.2e-06 26.3 0.0 1.4e-05 25.7 0.0 1.6 1 1 0 1 1 1 1 ELM2 domain Head-tail_con PF12236.8 BAM38818.1 - 0.086 11.3 0.1 0.1 11.0 0.1 1.1 1 0 0 1 1 1 0 Bacteriophage head to tail connecting protein GATase_7 PF13537.6 BAM38819.1 - 0.12 12.3 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Glutamine amidotransferase domain RRM_1 PF00076.22 BAM38820.1 - 1.9e-15 56.5 2.1 2.2e-15 56.2 0.1 2.0 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) eIF3g PF12353.8 BAM38820.1 - 4.9e-10 39.9 1.1 3.2e-09 37.2 0.1 2.2 1 1 1 2 2 2 1 Eukaryotic translation initiation factor 3 subunit G ubiquitin PF00240.23 BAM38821.1 - 0.061 13.1 0.0 0.14 11.9 0.0 1.6 1 0 0 1 1 1 0 Ubiquitin family UCH PF00443.29 BAM38822.1 - 9.3e-40 136.7 10.6 1.8e-39 135.8 10.6 1.5 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase zf-UBP_var PF17807.1 BAM38822.1 - 1.5e-17 63.1 3.1 5.8e-17 61.2 0.0 2.8 3 0 0 3 3 3 1 Variant UBP zinc finger zf-UBP PF02148.19 BAM38822.1 - 5.4e-13 49.1 0.7 2.2e-12 47.1 0.1 2.3 2 0 0 2 2 2 1 Zn-finger in ubiquitin-hydrolases and other protein UCH_1 PF13423.6 BAM38822.1 - 2.2e-06 27.5 13.9 9.9e-06 25.4 13.9 2.1 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase Ribosomal_L10 PF00466.20 BAM38823.1 - 3e-12 46.5 0.0 5.4e-12 45.7 0.0 1.5 1 0 0 1 1 1 1 Ribosomal protein L10 PDZ_3 PF17815.1 BAM38825.1 - 1.8e-45 154.3 0.1 5.1e-45 152.9 0.1 1.8 1 0 0 1 1 1 1 PDZ domain Trypsin_2 PF13365.6 BAM38825.1 - 1.4e-20 74.7 0.5 2.4e-20 74.0 0.5 1.4 1 0 0 1 1 1 1 Trypsin-like peptidase domain Trypsin PF00089.26 BAM38825.1 - 2.4e-17 63.5 0.5 4e-17 62.8 0.5 1.3 1 0 0 1 1 1 1 Trypsin PDZ_2 PF13180.6 BAM38825.1 - 2.1e-07 31.2 0.1 3.8e-06 27.1 0.0 2.6 2 0 0 2 2 2 1 PDZ domain PDZ_6 PF17820.1 BAM38825.1 - 0.01 15.7 1.8 0.38 10.6 0.0 3.3 4 0 0 4 4 4 0 PDZ domain PDZ PF00595.24 BAM38825.1 - 0.045 14.1 0.6 1.2 9.5 0.3 2.5 2 0 0 2 2 2 0 PDZ domain Glutaredoxin PF00462.24 BAM38826.1 - 5.6e-15 55.3 0.1 7.7e-15 54.9 0.1 1.2 1 0 0 1 1 1 1 Glutaredoxin GST_N_2 PF13409.6 BAM38826.1 - 0.00011 22.4 0.0 0.0002 21.6 0.0 1.4 1 0 0 1 1 1 1 Glutathione S-transferase, N-terminal domain GST_N_3 PF13417.6 BAM38826.1 - 0.00013 22.4 0.1 0.00029 21.2 0.0 1.6 2 0 0 2 2 2 1 Glutathione S-transferase, N-terminal domain GLTSCR1 PF15249.6 BAM38827.1 - 0.027 14.9 1.8 0.045 14.2 0.2 2.2 2 0 0 2 2 2 0 Conserved region of unknown function on GLTSCR protein UcrQ PF02939.16 BAM38828.1 - 0.0025 17.7 1.0 0.0042 17.0 1.0 1.4 1 0 0 1 1 1 1 UcrQ family NADH_B2 PF14813.6 BAM38828.1 - 0.33 10.8 4.5 0.47 10.3 1.9 2.2 2 0 0 2 2 2 0 NADH dehydrogenase 1 beta subcomplex subunit 2 Tubulin PF00091.25 BAM38829.1 - 2e-64 217.4 0.0 2.8e-64 217.0 0.0 1.2 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 BAM38829.1 - 8.6e-47 158.4 0.1 1.4e-46 157.7 0.1 1.4 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_2 PF13809.6 BAM38829.1 - 0.016 14.4 0.0 0.024 13.8 0.0 1.2 1 0 0 1 1 1 0 Tubulin like Tubulin_3 PF14881.6 BAM38829.1 - 0.11 12.1 0.0 0.52 10.0 0.0 2.0 2 0 0 2 2 2 0 Tubulin domain EMP24_GP25L PF01105.24 BAM38831.1 - 1.1e-23 84.2 0.4 2e-23 83.3 0.4 1.4 1 1 0 1 1 1 1 emp24/gp25L/p24 family/GOLD DUF3591 PF12157.8 BAM38832.1 - 8.1e-26 90.7 22.5 5e-15 55.1 0.1 4.6 5 0 0 5 5 5 3 Protein of unknown function (DUF3591) Bromodomain PF00439.25 BAM38832.1 - 4.1e-15 55.6 0.0 1.8e-14 53.6 0.0 2.1 1 0 0 1 1 1 1 Bromodomain zf-CCHC_6 PF15288.6 BAM38832.1 - 0.00016 21.4 1.7 0.00036 20.3 1.7 1.7 1 0 0 1 1 1 1 Zinc knuckle zf-CCHC PF00098.23 BAM38832.1 - 0.0028 17.6 0.9 0.0054 16.8 0.9 1.5 1 0 0 1 1 1 1 Zinc knuckle Proteasome PF00227.26 BAM38832.1 - 0.024 14.1 2.6 1.1 8.7 0.1 3.3 3 0 0 3 3 3 0 Proteasome subunit UPF0054 PF02130.17 BAM38833.1 - 1.2e-23 83.3 3.1 1.9e-22 79.4 3.1 2.3 1 1 0 1 1 1 1 Uncharacterized protein family UPF0054 DUF3290 PF11694.8 BAM38833.1 - 0.016 15.1 4.3 0.033 14.1 4.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3290) MOLO1 PF17175.4 BAM38834.1 - 1.3e-25 89.9 0.0 2.5e-25 88.9 0.0 1.5 1 0 0 1 1 1 1 Modulator of levamisole receptor-1 TPM_phosphatase PF04536.14 BAM38834.1 - 1.3e-07 31.8 0.0 3.7e-07 30.4 0.0 1.7 1 1 0 1 1 1 1 TPM domain Med26 PF08711.11 BAM38834.1 - 0.12 12.4 0.1 0.35 10.9 0.1 1.8 1 0 0 1 1 1 0 TFIIS helical bundle-like domain NOB1_Zn_bind PF08772.11 BAM38835.1 - 3.9e-20 71.8 0.7 9.1e-20 70.6 0.7 1.6 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like PIN_6 PF17146.4 BAM38835.1 - 3e-12 46.9 0.0 6.7e-12 45.8 0.0 1.6 1 0 0 1 1 1 1 PIN domain of ribonuclease DUF2321 PF10083.9 BAM38835.1 - 0.026 14.2 0.1 0.051 13.2 0.1 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) Nudix_N_2 PF14803.6 BAM38835.1 - 0.12 12.3 1.3 0.32 10.9 0.1 2.3 3 0 0 3 3 3 0 Nudix N-terminal Erythro_esteras PF05139.14 BAM38835.1 - 0.17 11.7 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 Erythromycin esterase TRAPP PF04051.16 BAM38836.1 - 1.8e-28 99.1 0.1 2.1e-28 98.9 0.1 1.0 1 0 0 1 1 1 1 Transport protein particle (TRAPP) component Phi-29_GP3 PF05435.11 BAM38836.1 - 0.1 12.1 0.3 0.19 11.2 0.0 1.8 2 0 0 2 2 2 0 Phi-29 DNA terminal protein GP3 TT_ORF2 PF02957.15 BAM38837.1 - 0.17 12.8 9.9 0.25 12.3 9.9 1.3 1 0 0 1 1 1 0 TT viral ORF2 Astro_capsid_p PF12226.8 BAM38837.1 - 0.41 9.8 16.5 0.44 9.6 16.5 1.0 1 0 0 1 1 1 0 Turkey astrovirus capsid protein DUF913 PF06025.12 BAM38837.1 - 1.7 7.5 4.9 1.6 7.6 4.9 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF913) DUF4820 PF16091.5 BAM38837.1 - 1.9 7.8 6.7 2.1 7.7 6.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) Presenilin PF01080.17 BAM38837.1 - 2 7.1 6.5 2.2 7.0 6.5 1.0 1 0 0 1 1 1 0 Presenilin RR_TM4-6 PF06459.12 BAM38837.1 - 2.9 7.6 11.4 3.1 7.5 11.4 1.0 1 0 0 1 1 1 0 Ryanodine Receptor TM 4-6 BUD22 PF09073.10 BAM38837.1 - 3.3 6.9 22.1 3.7 6.8 22.1 1.0 1 0 0 1 1 1 0 BUD22 Cwf_Cwc_15 PF04889.12 BAM38837.1 - 3.7 7.2 21.5 4.2 7.0 21.5 1.0 1 0 0 1 1 1 0 Cwf15/Cwc15 cell cycle control protein Zip PF02535.22 BAM38837.1 - 8.2 5.5 11.1 10 5.2 11.1 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter Pox_Ag35 PF03286.14 BAM38837.1 - 9.5 6.0 18.0 11 5.8 18.0 1.1 1 0 0 1 1 1 0 Pox virus Ag35 surface protein Exonuc_VII_L PF02601.15 BAM38838.1 - 0.014 14.9 0.7 0.022 14.3 0.7 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit Apolipoprotein PF01442.18 BAM38838.1 - 0.068 13.0 1.2 0.13 12.1 1.2 1.4 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain Peptidase_M55 PF04951.13 BAM38838.1 - 0.089 12.2 0.7 0.14 11.6 0.7 1.3 1 0 0 1 1 1 0 D-aminopeptidase YtxH PF12732.7 BAM38838.1 - 0.1 13.2 19.7 0.99 10.0 3.4 3.4 2 1 1 3 3 3 0 YtxH-like protein DUF883 PF05957.13 BAM38838.1 - 0.75 10.4 6.3 7.6 7.2 0.3 3.1 1 1 1 3 3 3 0 Bacterial protein of unknown function (DUF883) ApoLp-III PF07464.11 BAM38838.1 - 2.3 8.3 9.1 2 8.5 5.5 2.1 1 1 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) DUF4407 PF14362.6 BAM38838.1 - 4 6.7 6.0 5.6 6.2 6.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) eIF2_C PF09173.11 BAM38839.1 - 2e-35 120.9 0.1 5.9e-35 119.4 0.1 1.9 1 0 0 1 1 1 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU PF00009.27 BAM38839.1 - 1.4e-22 80.1 0.1 1e-21 77.4 0.1 2.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D2 PF03144.25 BAM38839.1 - 1.2e-10 41.7 2.9 1.4e-10 41.4 0.6 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 BAM38839.1 - 0.00062 19.8 0.0 0.0014 18.7 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 BAM38839.1 - 0.0056 16.6 0.7 0.097 12.6 0.1 2.2 2 0 0 2 2 2 1 RsgA GTPase Dynamin_N PF00350.23 BAM38839.1 - 0.11 12.6 0.0 0.5 10.4 0.0 2.1 2 0 0 2 2 2 0 Dynamin family TB2_DP1_HVA22 PF03134.19 BAM38840.1 - 4.8e-11 42.4 5.5 9.8e-11 41.4 5.5 1.5 1 0 0 1 1 1 1 TB2/DP1, HVA22 family AMPK1_CBM PF16561.5 BAM38841.1 - 2.6e-15 56.4 0.2 4.9e-15 55.5 0.1 1.5 2 0 0 2 2 2 1 Glycogen recognition site of AMP-activated protein kinase RRM_1 PF00076.22 BAM38842.1 - 1.1e-18 66.8 0.3 1.4e-18 66.4 0.3 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 BAM38842.1 - 0.00017 21.2 0.0 0.0002 20.9 0.0 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 BAM38842.1 - 0.00018 21.4 0.0 0.00033 20.6 0.0 1.5 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif RRM_7 PF16367.5 BAM38842.1 - 0.00054 20.0 0.0 0.0008 19.5 0.0 1.4 1 1 0 1 1 1 1 RNA recognition motif PHM7_cyt PF14703.6 BAM38842.1 - 0.011 15.9 0.1 0.11 12.7 0.1 2.0 1 1 1 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter RRM_occluded PF16842.5 BAM38842.1 - 0.054 13.4 0.0 0.082 12.8 0.0 1.4 1 1 0 1 1 1 0 Occluded RNA-recognition motif DHHC PF01529.20 BAM38843.1 - 4e-31 107.9 20.7 4e-31 107.9 20.7 1.9 2 0 0 2 2 2 1 DHHC palmitoyltransferase DUF2428 PF10350.9 BAM38844.1 - 1.4e-05 24.5 0.1 5.7e-05 22.5 0.1 2.1 1 1 0 1 1 1 1 Putative death-receptor fusion protein (DUF2428) Fez1 PF06818.15 BAM38845.1 - 0.016 15.7 2.3 0.025 15.0 2.3 1.4 1 0 0 1 1 1 0 Fez1 Seryl_tRNA_N PF02403.22 BAM38845.1 - 6 7.1 9.7 19 5.5 8.6 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Actin PF00022.19 BAM38847.1 - 1.2e-54 185.5 0.0 1.2e-52 178.9 0.0 2.3 1 1 0 1 1 1 1 Actin Med21 PF11221.8 BAM38848.1 - 0.023 14.9 0.7 0.068 13.4 0.1 2.1 2 0 0 2 2 2 0 Subunit 21 of Mediator complex JIP_LZII PF16471.5 BAM38848.1 - 0.3 11.3 4.7 9.9 6.4 0.2 2.8 2 0 0 2 2 2 0 JNK-interacting protein leucine zipper II DUF1192 PF06698.11 BAM38848.1 - 0.73 9.9 4.4 0.39 10.8 0.8 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) Lebercilin PF15619.6 BAM38848.1 - 2 8.1 5.8 1.5 8.4 0.4 2.6 2 1 0 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Dict-STAT-coil PF09267.10 BAM38848.1 - 3.4 8.1 8.4 2 8.8 0.1 3.7 3 1 1 4 4 4 0 Dictyostelium STAT, coiled coil zf-ZPR1 PF03367.13 BAM38849.1 - 2.3e-86 287.6 5.0 1.3e-43 148.6 0.2 2.4 2 0 0 2 2 2 2 ZPR1 zinc-finger domain tRNA-synt_2 PF00152.20 BAM38849.1 - 0.0057 15.8 0.7 0.087 11.9 0.2 2.1 2 0 0 2 2 2 1 tRNA synthetases class II (D, K and N) FdhD-NarQ PF02634.15 BAM38849.1 - 0.017 14.8 0.8 0.065 12.9 0.2 2.1 2 0 0 2 2 2 0 FdhD/NarQ family RNHCP PF12647.7 BAM38849.1 - 2.3 8.2 5.5 5.9 6.9 0.0 3.3 3 1 0 3 3 3 0 RNHCP domain Nore1-SARAH PF16517.5 BAM38849.1 - 4 7.4 6.9 0.53 10.2 0.7 2.4 2 0 0 2 2 2 0 Novel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domain zf-RING_4 PF14570.6 BAM38850.1 - 4.4e-20 71.2 11.2 8.5e-20 70.3 11.2 1.5 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain zf-C3HC4_3 PF13920.6 BAM38850.1 - 9.1e-09 35.0 8.1 2e-08 33.9 8.1 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) RRM_1 PF00076.22 BAM38850.1 - 1.9e-05 24.4 0.0 4.9e-05 23.1 0.0 1.8 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-UDP PF14569.6 BAM38850.1 - 0.0027 17.8 4.2 0.0063 16.6 4.2 1.6 1 0 0 1 1 1 1 Zinc-binding RING-finger Rtf2 PF04641.12 BAM38850.1 - 0.0038 16.6 5.3 0.0038 16.6 5.3 2.1 3 0 0 3 3 3 1 Rtf2 RING-finger Torus PF16131.5 BAM38850.1 - 0.0095 16.6 1.8 0.0095 16.6 1.8 2.6 3 0 0 3 3 3 1 Torus domain zf-RING_2 PF13639.6 BAM38850.1 - 0.014 15.7 10.4 0.014 15.7 10.4 1.9 2 0 0 2 2 1 0 Ring finger domain zf-C3HC4 PF00097.25 BAM38850.1 - 0.021 14.7 10.0 0.053 13.4 10.0 1.8 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) RNA_pol_Rpc4 PF05132.14 BAM38850.1 - 0.03 14.8 1.4 0.03 14.8 1.4 2.6 3 0 0 3 3 3 0 RNA polymerase III RPC4 Baculo_IE-1 PF05290.11 BAM38850.1 - 0.07 13.1 3.7 0.16 11.9 3.7 1.7 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) Prok-RING_4 PF14447.6 BAM38850.1 - 0.21 11.5 7.3 4.8 7.1 7.4 2.4 1 1 1 2 2 2 0 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 BAM38850.1 - 1.1 9.3 6.8 4.2 7.5 6.8 2.1 1 1 0 1 1 1 0 RING-type zinc-finger zf-C3HC4_2 PF13923.6 BAM38850.1 - 1.4 8.8 10.8 3.4 7.6 10.8 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF3464 PF11947.8 BAM38850.1 - 1.9 8.3 10.9 0.11 12.2 1.3 2.5 3 0 0 3 3 3 0 Photosynthesis affected mutant 68 zf-C3HC4_4 PF15227.6 BAM38850.1 - 2.4 8.4 9.0 8.3 6.7 9.0 2.0 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING SBDS PF01172.18 BAM38851.1 - 5.2e-30 103.4 1.4 5.2e-30 103.4 1.4 1.9 2 0 0 2 2 2 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.10 BAM38851.1 - 7.6e-28 96.9 0.0 1.8e-27 95.7 0.0 1.7 1 0 0 1 1 1 1 SBDS protein C-terminal domain CDT1_C PF16679.5 BAM38851.1 - 0.0062 16.9 0.1 1.9 8.9 0.0 2.3 2 0 0 2 2 2 2 DNA replication factor Cdt1 C-terminal domain 2C_adapt PF08793.10 BAM38851.1 - 0.12 12.6 0.2 0.24 11.6 0.2 1.4 1 0 0 1 1 1 0 2-cysteine adaptor domain ING PF12998.7 BAM38852.1 - 7.6e-07 29.7 3.2 0.00023 21.7 0.1 2.8 2 1 0 2 2 2 2 Inhibitor of growth proteins N-terminal histone-binding HALZ PF02183.18 BAM38852.1 - 0.1 12.8 1.6 0.16 12.2 0.2 2.0 2 0 0 2 2 2 0 Homeobox associated leucine zipper RAP PF08373.10 BAM38853.1 - 1.4e-10 41.1 0.2 7.5e-10 38.8 0.2 2.4 1 0 0 1 1 1 1 RAP domain NLRC4_HD2 PF17776.1 BAM38853.1 - 0.15 12.6 2.3 0.32 11.6 0.3 2.6 2 1 0 2 2 2 0 NLRC4 helical domain HD2 ANAPC9 PF12856.7 BAM38853.1 - 0.61 10.3 3.5 0.27 11.4 0.4 1.9 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 9 Ribosomal_S13 PF00416.22 BAM38855.1 - 6.8e-50 168.7 1.4 8.7e-50 168.4 1.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S13/S18 DUF2746 PF10874.8 BAM38855.1 - 0.0054 17.1 0.0 0.022 15.2 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF2746) FbpA PF05833.11 BAM38855.1 - 0.011 14.5 0.0 0.013 14.3 0.0 1.2 1 0 0 1 1 1 0 Fibronectin-binding protein A N-terminus (FbpA) PGM_PMM_II PF02879.16 BAM38855.1 - 0.16 12.6 0.0 0.35 11.5 0.0 1.5 1 0 0 1 1 1 0 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II Ribosomal_L5_C PF00673.21 BAM38856.1 - 1.1e-22 80.1 0.0 1.4e-22 79.6 0.0 1.2 1 0 0 1 1 1 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 BAM38856.1 - 8.9e-18 64.4 0.0 1.6e-17 63.5 0.0 1.5 1 0 0 1 1 1 1 Ribosomal protein L5 ACT_5 PF13710.6 BAM38856.1 - 0.094 12.6 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 ACT domain Picorna_P3A PF06363.11 BAM38856.1 - 0.15 12.0 0.0 0.28 11.1 0.0 1.5 1 0 0 1 1 1 0 Picornaviridae P3A protein DUF4554 PF15091.6 BAM38857.1 - 1.6 7.5 7.6 0.45 9.4 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4554) WD40 PF00400.32 BAM38858.1 - 1.1e-05 26.0 0.1 0.042 14.7 0.0 4.2 4 0 0 4 4 4 2 WD domain, G-beta repeat Hira PF07569.11 BAM38858.1 - 0.02 14.7 0.0 0.33 10.6 0.0 2.5 2 0 0 2 2 2 0 TUP1-like enhancer of split Pkinase PF00069.25 BAM38859.1 - 1.7e-58 198.1 0.0 1.4e-37 129.5 0.0 3.2 3 0 0 3 3 3 3 Protein kinase domain Pkinase_Tyr PF07714.17 BAM38859.1 - 2.1e-27 96.0 0.0 8.1e-24 84.3 0.0 2.3 2 0 0 2 2 2 2 Protein tyrosine kinase Haspin_kinase PF12330.8 BAM38859.1 - 0.015 14.2 1.1 0.057 12.4 1.1 2.0 1 1 0 1 1 1 0 Haspin like kinase domain Kinase-like PF14531.6 BAM38859.1 - 0.04 13.2 0.0 0.14 11.5 0.0 1.8 2 0 0 2 2 2 0 Kinase-like RabGAP-TBC PF00566.18 BAM38860.1 - 8.7e-47 159.5 6.1 6e-36 124.1 2.5 3.3 2 1 0 2 2 2 2 Rab-GTPase-TBC domain RAP PF08373.10 BAM38861.1 - 1e-06 28.7 0.2 1e-06 28.7 0.2 2.5 2 0 0 2 2 2 1 RAP domain mRNA_triPase PF02940.15 BAM38861.1 - 0.023 14.4 2.6 0.14 11.9 0.2 2.5 2 0 0 2 2 2 0 mRNA capping enzyme, beta chain IMPDH PF00478.25 BAM38862.1 - 5.4e-60 203.2 1.3 7.7e-59 199.4 1.3 1.9 1 1 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain FMN_dh PF01070.18 BAM38862.1 - 1.1e-06 28.0 1.2 2e-05 23.8 1.0 2.2 2 0 0 2 2 2 1 FMN-dependent dehydrogenase NMO PF03060.15 BAM38862.1 - 0.00035 20.1 0.2 0.00045 19.7 0.2 1.2 1 0 0 1 1 1 1 Nitronate monooxygenase His_biosynth PF00977.21 BAM38862.1 - 0.0065 15.9 0.3 0.74 9.2 0.0 3.0 3 0 0 3 3 3 1 Histidine biosynthesis protein TMP-TENI PF02581.17 BAM38862.1 - 0.031 13.6 0.1 0.054 12.8 0.1 1.5 1 0 0 1 1 1 0 Thiamine monophosphate synthase Peptidase_M24 PF00557.24 BAM38863.1 - 2.6e-21 76.3 0.0 3.3e-21 76.0 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 AAA_32 PF13654.6 BAM38863.1 - 0.041 12.7 0.0 0.061 12.1 0.0 1.1 1 0 0 1 1 1 0 AAA domain DUF2242 PF10001.9 BAM38863.1 - 0.14 12.3 0.4 1.5 9.1 0.4 2.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2242) DUF2140 PF09911.9 BAM38864.1 - 0.033 13.7 0.2 0.05 13.1 0.2 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2140) DUF5082 PF16888.5 BAM38864.1 - 0.053 13.8 0.1 0.098 12.9 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5082) Med4 PF10018.9 BAM38864.1 - 0.067 12.9 0.2 0.11 12.1 0.2 1.3 1 0 0 1 1 1 0 Vitamin-D-receptor interacting Mediator subunit 4 BA14K PF07886.11 BAM38864.1 - 0.22 11.4 0.2 0.22 11.4 0.2 1.7 2 0 0 2 2 2 0 BA14K-like protein BHD_1 PF10403.9 BAM38865.1 - 1.9e-06 27.6 0.0 7.1e-06 25.8 0.0 2.1 1 1 0 1 1 1 1 Rad4 beta-hairpin domain 1 BHD_3 PF10405.9 BAM38865.1 - 0.0081 16.6 0.0 0.018 15.4 0.0 1.5 1 0 0 1 1 1 1 Rad4 beta-hairpin domain 3 Ribosomal_L13 PF00572.18 BAM38866.1 - 3.8e-37 127.3 0.2 1.5e-36 125.4 0.2 2.1 1 0 0 1 1 1 1 Ribosomal protein L13 LTV PF04180.14 BAM38866.1 - 0.015 15.1 34.1 0.019 14.7 5.6 3.7 2 1 1 3 3 3 0 Low temperature viability protein DUF4783 PF16022.5 BAM38866.1 - 0.17 12.1 1.6 0.39 10.9 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4783) Sec23_trunk PF04811.15 BAM38868.1 - 9.2e-21 74.5 0.2 1.5e-20 73.8 0.2 1.3 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain Sec23_BS PF08033.12 BAM38868.1 - 8.9e-14 52.0 1.4 2.4e-13 50.6 0.1 2.3 2 0 0 2 2 2 1 Sec23/Sec24 beta-sandwich domain Sec23_helical PF04815.15 BAM38868.1 - 1.4e-11 44.1 0.1 5e-11 42.3 0.0 1.9 2 0 0 2 2 2 1 Sec23/Sec24 helical domain zf-Sec23_Sec24 PF04810.15 BAM38868.1 - 1.6e-10 40.8 4.1 4.2e-10 39.5 4.1 1.8 1 0 0 1 1 1 1 Sec23/Sec24 zinc finger Gelsolin PF00626.22 BAM38868.1 - 0.00015 21.6 0.0 0.00032 20.6 0.0 1.5 1 0 0 1 1 1 1 Gelsolin repeat DEAD PF00270.29 BAM38869.1 - 2.1e-30 105.8 0.0 3.9e-30 104.9 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM38869.1 - 2.3e-24 85.8 0.8 1.9e-23 82.9 0.1 2.6 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM38869.1 - 7e-07 29.4 0.0 2.2e-06 27.8 0.0 1.8 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Helicase_C_2 PF13307.6 BAM38869.1 - 0.0003 21.0 0.3 0.00091 19.4 0.2 1.8 1 1 1 2 2 2 1 Helicase C-terminal domain ERCC3_RAD25_C PF16203.5 BAM38869.1 - 0.00097 18.4 0.1 0.0017 17.6 0.1 1.4 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase BST2 PF16716.5 BAM38870.1 - 0.034 14.7 0.3 0.096 13.3 0.3 1.8 1 0 0 1 1 1 0 Bone marrow stromal antigen 2 LSM PF01423.22 BAM38871.1 - 2e-19 69.0 0.0 2.3e-19 68.9 0.0 1.0 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 BAM38871.1 - 0.0003 20.9 0.0 0.00035 20.6 0.0 1.2 1 0 0 1 1 1 1 Ataxin 2 SM domain Hfq PF17209.3 BAM38871.1 - 0.07 12.8 0.0 0.094 12.4 0.0 1.2 1 0 0 1 1 1 0 Hfq protein Methyltransf_4 PF02390.17 BAM38872.1 - 6.4e-42 142.9 0.0 1.8e-41 141.5 0.0 1.6 1 1 0 1 1 1 1 Putative methyltransferase Methyltransf_11 PF08241.12 BAM38872.1 - 0.02 15.5 0.0 0.1 13.3 0.0 2.0 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_25 PF13649.6 BAM38872.1 - 0.028 15.1 0.0 0.043 14.5 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain MetW PF07021.12 BAM38872.1 - 0.086 12.4 0.0 0.14 11.7 0.0 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW Methyltransf_31 PF13847.6 BAM38872.1 - 0.087 12.6 0.0 0.18 11.6 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain CMAS PF02353.20 BAM38872.1 - 0.1 11.9 0.0 0.22 10.8 0.0 1.5 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase MTS PF05175.14 BAM38872.1 - 0.12 11.9 0.0 0.27 10.8 0.0 1.6 2 0 0 2 2 2 0 Methyltransferase small domain Methyltransf_23 PF13489.6 BAM38872.1 - 0.17 11.7 0.0 0.33 10.8 0.0 1.8 1 1 0 1 1 1 0 Methyltransferase domain Use1 PF09753.9 BAM38874.1 - 2 8.1 11.0 1.7 8.3 10.0 1.3 1 1 0 1 1 1 0 Membrane fusion protein Use1 dUTPase PF00692.19 BAM38875.1 - 1.6e-18 66.7 0.0 9e-18 64.2 0.0 1.8 1 1 0 1 1 1 1 dUTPase SOBP PF15279.6 BAM38876.1 - 4.3 7.8 8.9 15 6.1 0.5 2.3 2 0 0 2 2 2 0 Sine oculis-binding protein Rhomboid PF01694.22 BAM38877.1 - 1.1e-10 41.7 11.7 1.1e-10 41.7 11.7 2.1 3 0 0 3 3 3 1 Rhomboid family DNA_pol_A PF00476.20 BAM38879.1 - 1.3e-83 281.2 5.7 2e-83 280.5 5.7 1.3 1 0 0 1 1 1 1 DNA polymerase family A DNA_pol_A_exo1 PF01612.20 BAM38879.1 - 1.2e-25 90.3 0.2 5.6e-25 88.1 0.0 2.1 2 0 0 2 2 2 1 3'-5' exonuclease AAA_25 PF13481.6 BAM38879.1 - 1.6e-22 80.0 0.0 4.5e-22 78.6 0.0 1.7 2 0 0 2 2 2 1 AAA domain Toprim_2 PF13155.6 BAM38879.1 - 4.3e-05 23.9 0.0 0.00024 21.4 0.0 2.4 2 0 0 2 2 2 1 Toprim-like ATPase PF06745.13 BAM38879.1 - 0.00051 19.5 0.3 0.002 17.5 0.0 2.1 2 0 0 2 2 2 1 KaiC DnaB_C PF03796.15 BAM38879.1 - 0.00079 18.8 3.1 0.001 18.5 0.0 2.7 3 0 0 3 3 3 1 DnaB-like helicase C terminal domain AAA_22 PF13401.6 BAM38879.1 - 0.0081 16.4 0.0 0.028 14.7 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAM38879.1 - 0.0098 16.3 0.0 0.031 14.7 0.0 1.8 1 0 0 1 1 1 1 AAA ATPase domain Toprim_4 PF13662.6 BAM38879.1 - 0.038 14.5 0.0 0.15 12.6 0.0 2.1 1 0 0 1 1 1 0 Toprim domain T2SSE PF00437.20 BAM38879.1 - 0.052 12.6 0.1 0.11 11.5 0.1 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein PRK PF00485.18 BAM38879.1 - 0.089 12.5 0.0 0.25 11.1 0.0 1.7 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family RsgA_GTPase PF03193.16 BAM38879.1 - 0.09 12.7 0.1 1.2 9.0 0.1 2.6 2 0 0 2 2 2 0 RsgA GTPase Toprim_3 PF13362.6 BAM38879.1 - 0.1 13.0 0.0 0.32 11.4 0.0 1.9 1 0 0 1 1 1 0 Toprim domain AAA_29 PF13555.6 BAM38879.1 - 0.11 12.3 0.4 0.47 10.2 0.4 2.1 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF3490 PF11995.8 BAM38879.1 - 0.65 9.8 3.7 2.1 8.1 3.7 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF3490) cobW PF02492.19 BAM38879.1 - 5.2 6.6 5.5 0.53 9.9 0.3 1.9 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain YfbU PF03887.14 BAM38880.1 - 0.0047 17.0 2.9 0.0077 16.3 0.6 2.4 2 0 0 2 2 2 1 YfbU domain ATP-synt_ab PF00006.25 BAM38881.1 - 3.5e-67 226.2 0.0 6.6e-67 225.3 0.0 1.5 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 BAM38881.1 - 2.1e-18 66.6 0.1 7.8e-18 64.8 0.1 2.1 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain NB-ARC PF00931.22 BAM38881.1 - 0.021 14.0 0.2 0.048 12.8 0.1 1.6 2 0 0 2 2 2 0 NB-ARC domain RsgA_GTPase PF03193.16 BAM38881.1 - 0.024 14.6 0.1 0.056 13.3 0.1 1.6 1 0 0 1 1 1 0 RsgA GTPase NACHT PF05729.12 BAM38881.1 - 0.032 14.1 0.0 0.13 12.2 0.0 1.9 2 0 0 2 2 2 0 NACHT domain ATPase_2 PF01637.18 BAM38881.1 - 0.035 14.0 0.0 0.091 12.7 0.0 1.7 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA PF00004.29 BAM38881.1 - 0.044 14.2 0.0 0.76 10.2 0.0 2.5 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ATPase PF06745.13 BAM38881.1 - 0.15 11.3 0.5 0.28 10.5 0.5 1.4 1 0 0 1 1 1 0 KaiC SHMT PF00464.19 BAM38882.1 - 2.4e-169 563.2 0.0 3e-169 562.8 0.0 1.1 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Med26 PF08711.11 BAM38883.1 - 1.5e-11 44.1 0.5 5.2e-11 42.4 0.5 2.0 1 0 0 1 1 1 1 TFIIS helical bundle-like domain Dscam_C PF12355.8 BAM38883.1 - 0.091 13.7 3.3 0.7 10.9 0.1 2.9 2 0 0 2 2 2 0 Down syndrome cell adhesion molecule C terminal PMT2_N PF17987.1 BAM38883.1 - 0.35 11.1 2.7 0.22 11.7 0.1 2.0 3 0 0 3 3 3 0 Phosphoethanolamine N-methyltransferase 2 N-terminal PRIMA1 PF16101.5 BAM38883.1 - 0.66 10.0 12.9 1.6 8.8 0.9 2.6 2 0 0 2 2 2 0 Proline-rich membrane anchor 1 CDC45 PF02724.14 BAM38884.1 - 0.083 11.2 5.2 0.071 11.4 5.2 1.1 1 0 0 1 1 1 0 CDC45-like protein Glypican PF01153.19 BAM38884.1 - 0.086 11.7 1.1 0.13 11.0 1.1 1.2 1 0 0 1 1 1 0 Glypican SID-1_RNA_chan PF13965.6 BAM38884.1 - 0.12 10.7 0.2 0.18 10.2 0.2 1.1 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 FAM176 PF14851.6 BAM38884.1 - 0.2 11.3 3.7 0.35 10.5 3.7 1.6 1 0 0 1 1 1 0 FAM176 family DNA_pol_phi PF04931.13 BAM38884.1 - 1.1 7.2 14.4 1.6 6.8 14.4 1.2 1 0 0 1 1 1 0 DNA polymerase phi NOA36 PF06524.12 BAM38884.1 - 2.2 7.5 17.3 3.6 6.8 17.3 1.3 1 0 0 1 1 1 0 NOA36 protein DUF1604 PF07713.13 BAM38884.1 - 2.5 8.0 7.5 16 5.4 7.5 2.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1604) Ribosomal_L35p PF01632.19 BAM38885.1 - 4.6e-09 36.7 10.7 4.6e-09 36.7 10.7 1.5 1 1 1 2 2 2 1 Ribosomal protein L35 FCP1_C PF09309.10 BAM38885.1 - 0.19 11.5 0.2 0.22 11.4 0.2 1.0 1 0 0 1 1 1 0 FCP1, C-terminal Coatomer_WDAD PF04053.14 BAM38886.1 - 1.3e-83 281.5 2.4 1.3e-83 281.5 2.4 2.7 2 1 0 2 2 2 1 Coatomer WD associated region WD40 PF00400.32 BAM38886.1 - 8.5e-31 105.5 8.4 2.3e-08 34.6 0.3 7.9 7 0 0 7 7 7 6 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM38886.1 - 0.00067 19.9 0.2 2 8.7 0.0 4.6 2 1 4 6 6 6 1 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 BAM38886.1 - 0.098 12.0 0.0 0.85 8.9 0.0 2.5 2 0 0 2 2 2 0 WD40-like domain Snf7 PF03357.21 BAM38887.1 - 5.6e-06 26.1 9.9 6.6e-06 25.8 9.9 1.1 1 0 0 1 1 1 1 Snf7 AMP-binding_C_2 PF14535.6 BAM38887.1 - 0.15 12.3 2.5 0.31 11.4 1.2 2.1 1 1 1 2 2 2 0 AMP-binding enzyme C-terminal domain UPF0242 PF06785.11 BAM38887.1 - 1.4 9.0 10.5 1.9 8.5 10.5 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus RNB PF00773.19 BAM38888.1 - 9.2e-98 327.6 4.5 9.2e-98 327.6 4.5 2.2 2 1 0 2 2 2 1 RNB domain OB_Dis3 PF17849.1 BAM38888.1 - 2.2e-08 34.0 0.0 5.1e-08 32.8 0.0 1.6 1 0 0 1 1 1 1 Dis3-like cold-shock domain 2 (CSD2) CSD2 PF17876.1 BAM38888.1 - 0.0012 19.0 0.0 0.013 15.7 0.0 2.5 2 0 0 2 2 2 1 Cold shock domain DUF3458_C PF17432.2 BAM38889.1 - 7e-85 285.2 0.6 1e-84 284.7 0.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3458_C) ARM repeats Peptidase_M1 PF01433.20 BAM38889.1 - 1.9e-51 174.7 1.5 3.3e-51 173.9 1.5 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain DUF3458 PF11940.8 BAM38889.1 - 4.4e-23 81.6 0.0 8.8e-23 80.6 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3458) Ig-like fold Peptidase_M1_N PF17900.1 BAM38889.1 - 1.3e-15 58.1 0.0 4.5e-15 56.3 0.0 1.9 2 0 0 2 2 2 1 Peptidase M1 N-terminal domain Peptidase_M61 PF05299.12 BAM38889.1 - 0.051 14.0 0.0 0.14 12.5 0.0 1.9 1 0 0 1 1 1 0 M61 glycyl aminopeptidase LigA PF07746.11 BAM38889.1 - 0.078 13.1 0.0 0.28 11.4 0.0 1.9 1 0 0 1 1 1 0 Aromatic-ring-opening dioxygenase LigAB, LigA subunit RNase_PH PF01138.21 BAM38891.1 - 2.3e-14 54.0 0.3 1.1e-13 51.8 0.1 2.0 2 0 0 2 2 2 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 BAM38891.1 - 0.0016 18.4 0.5 0.0036 17.3 0.5 1.6 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 GluR_Homer-bdg PF10606.9 BAM38891.1 - 0.19 12.0 0.5 13 6.1 0.0 3.1 3 0 0 3 3 3 0 Homer-binding domain of metabotropic glutamate receptor LRR_9 PF14580.6 BAM38892.1 - 1.5e-13 50.7 0.9 2.5e-13 49.9 0.9 1.3 1 1 0 1 1 1 1 Leucine-rich repeat LRR_4 PF12799.7 BAM38892.1 - 5.1e-09 36.3 10.6 1.5e-05 25.3 1.6 4.1 4 2 0 4 4 4 2 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 BAM38892.1 - 2.6e-07 30.3 5.7 0.0037 17.0 3.0 4.0 1 1 2 3 3 3 2 Leucine rich repeat LRR_6 PF13516.6 BAM38892.1 - 0.0034 17.3 0.2 3.2 8.0 0.0 3.9 4 0 0 4 4 4 1 Leucine Rich repeat LRR_1 PF00560.33 BAM38892.1 - 0.53 11.0 3.0 36 5.5 0.0 4.0 4 0 0 4 4 4 0 Leucine Rich Repeat TFIIF_alpha PF05793.12 BAM38892.1 - 5.3 5.5 15.7 7.1 5.1 15.7 1.1 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Astro_capsid_p PF12226.8 BAM38892.1 - 9.6 5.2 10.9 14 4.7 10.9 1.2 1 0 0 1 1 1 0 Turkey astrovirus capsid protein Wbp11 PF09429.10 BAM38893.1 - 3e-08 34.0 16.0 3e-08 34.0 16.0 3.3 4 1 0 4 4 4 1 WW domain binding protein 11 GvpG PF05120.12 BAM38893.1 - 0.38 10.8 10.4 0.086 12.9 4.9 2.2 2 0 0 2 2 2 0 Gas vesicle protein G Pox_F16 PF04708.12 BAM38894.1 - 0.036 13.5 0.5 0.061 12.8 0.5 1.3 1 0 0 1 1 1 0 Poxvirus F16 protein Drf_FH3 PF06367.16 BAM38894.1 - 1 8.9 7.2 0.28 10.8 2.7 2.2 2 0 0 2 2 2 0 Diaphanous FH3 Domain SYCE1 PF15233.6 BAM38895.1 - 0.01 15.9 0.3 0.015 15.3 0.3 1.4 1 0 0 1 1 1 0 Synaptonemal complex central element protein 1 Swi5 PF07061.11 BAM38895.1 - 0.014 15.4 1.7 0.38 10.9 0.4 2.1 2 0 0 2 2 2 0 Swi5 MFS_1 PF07690.16 BAM38896.1 - 8.9e-13 47.9 22.9 8.9e-13 47.9 22.9 2.2 2 0 0 2 2 2 2 Major Facilitator Superfamily DUF2140 PF09911.9 BAM38896.1 - 0.14 11.7 0.1 1.3 8.5 0.0 2.4 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2140) SelB-wing_3 PF09107.11 BAM38897.1 - 0.026 14.2 0.6 0.064 12.9 0.6 1.6 1 0 0 1 1 1 0 Elongation factor SelB, winged helix Asn_synthase PF00733.21 BAM38898.1 - 3e-08 33.7 2.5 0.013 15.2 0.5 3.8 2 1 0 2 2 2 2 Asparagine synthase FPL PF09758.9 BAM38899.1 - 0.04 13.9 0.2 0.045 13.7 0.2 1.1 1 0 0 1 1 1 0 Uncharacterised conserved protein HEAT PF02985.22 BAM38900.1 - 0.00018 21.4 1.0 0.023 14.9 0.1 3.4 2 0 0 2 2 2 1 HEAT repeat RTP1_C1 PF10363.9 BAM38900.1 - 3.2 8.0 9.5 1.4 9.1 0.2 4.8 5 0 0 5 5 5 0 Required for nuclear transport of RNA pol II C-terminus 1 DUF2229 PF09989.9 BAM38900.1 - 6 6.5 7.0 86 2.7 6.6 2.9 2 0 0 2 2 2 0 CoA enzyme activase uncharacterised domain (DUF2229) Cnd1 PF12717.7 BAM38900.1 - 8.3 6.4 17.3 0.21 11.6 0.5 4.6 4 1 1 5 5 5 0 non-SMC mitotic condensation complex subunit 1 DUF3417 PF11897.8 BAM38900.1 - 9.5 6.7 10.2 17 5.9 5.2 3.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3417) FAINT PF04385.15 BAM38901.1 - 3.7e-21 75.0 41.1 3.9e-08 33.2 2.7 8.2 8 0 0 8 8 8 6 Domain of unknown function, DUF529 RasGEF PF00617.19 BAM38902.1 - 0.025 14.8 0.1 0.038 14.2 0.1 1.3 1 0 0 1 1 1 0 RasGEF domain DUF4121 PF13497.6 BAM38902.1 - 0.13 11.4 0.2 0.19 10.8 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4121) DUF743 PF05332.11 BAM38904.1 - 0.028 14.5 0.0 0.041 14.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF743) Ribosomal_L6 PF00347.23 BAM38905.1 - 1.3e-22 80.3 5.4 1.2e-12 48.4 0.1 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 Ribosomal_S15 PF00312.22 BAM38906.1 - 5.4e-22 77.8 0.4 1e-21 76.9 0.4 1.5 1 0 0 1 1 1 1 Ribosomal protein S15 TPR_2 PF07719.17 BAM38907.1 - 6.2e-13 47.8 0.0 5.7e-05 22.9 0.0 4.7 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.6 BAM38907.1 - 1.4e-12 46.7 0.3 0.0027 17.8 0.0 5.4 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_1 PF00515.28 BAM38907.1 - 1.5e-12 46.7 0.8 8.7e-05 22.2 0.1 4.8 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_11 PF13414.6 BAM38907.1 - 3.2e-09 36.3 3.0 5.8e-05 22.7 0.0 4.3 5 0 0 5 5 5 2 TPR repeat TPR_19 PF14559.6 BAM38907.1 - 3.5e-08 33.8 0.1 0.0067 16.9 0.0 3.8 3 1 1 4 4 3 2 Tetratricopeptide repeat TPR_16 PF13432.6 BAM38907.1 - 1.3e-07 32.2 0.0 0.001 19.7 0.0 3.2 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_14 PF13428.6 BAM38907.1 - 2.7e-06 27.7 0.2 0.086 13.7 0.0 4.5 4 1 1 5 5 4 2 Tetratricopeptide repeat ANAPC3 PF12895.7 BAM38907.1 - 9e-05 22.6 0.3 0.0011 19.1 0.1 3.0 3 1 0 3 3 3 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 BAM38907.1 - 0.00072 19.4 1.9 0.099 12.7 0.0 4.4 5 0 0 5 5 5 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 BAM38907.1 - 0.001 19.1 0.2 0.42 10.7 0.2 2.8 1 1 1 2 2 2 2 Fis1 C-terminal tetratricopeptide repeat TPR_17 PF13431.6 BAM38907.1 - 0.0021 18.3 1.1 0.072 13.5 0.0 3.7 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_9 PF13371.6 BAM38907.1 - 0.0028 17.8 0.0 0.64 10.2 0.0 2.7 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_10 PF13374.6 BAM38907.1 - 0.016 15.0 0.2 0.19 11.6 0.1 2.9 2 0 0 2 2 2 0 Tetratricopeptide repeat BTAD PF03704.17 BAM38907.1 - 0.027 14.9 0.0 0.082 13.3 0.0 1.8 1 0 0 1 1 1 0 Bacterial transcriptional activator domain TPR_6 PF13174.6 BAM38907.1 - 0.028 15.1 0.0 18 6.2 0.0 3.1 2 0 0 2 2 2 0 Tetratricopeptide repeat DUF1804 PF08822.11 BAM38907.1 - 0.062 13.3 0.3 0.19 11.7 0.3 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1804) TPR_12 PF13424.6 BAM38907.1 - 0.09 13.1 0.6 0.87 9.9 0.1 2.7 2 1 1 3 3 3 0 Tetratricopeptide repeat RRM_1 PF00076.22 BAM38908.1 - 6.7e-06 25.8 0.0 9.1e-06 25.4 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RL PF17797.1 BAM38908.1 - 0.00023 21.0 0.0 0.0003 20.7 0.0 1.2 1 0 0 1 1 1 1 RL domain Fis1_TPR_N PF14852.6 BAM38908.1 - 0.061 13.0 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 Fis1 N-terminal tetratricopeptide repeat DUF2002 PF09400.10 BAM38908.1 - 0.13 12.3 0.0 0.16 12.0 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2002) SPC12 PF06645.13 BAM38910.1 - 4.3e-19 68.3 0.3 5.5e-19 68.0 0.3 1.1 1 0 0 1 1 1 1 Microsomal signal peptidase 12 kDa subunit (SPC12) TMEM100 PF16311.5 BAM38910.1 - 0.0045 16.6 0.1 0.0058 16.2 0.1 1.1 1 0 0 1 1 1 1 Transmembrane protein 100 DUF2232 PF09991.9 BAM38910.1 - 0.04 13.1 0.7 0.049 12.8 0.7 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2232) RWD PF05773.22 BAM38912.1 - 1.6e-08 34.9 0.0 1.1e-07 32.1 0.0 2.6 1 0 0 1 1 1 1 RWD domain Pkinase PF00069.25 BAM38912.1 - 4.4e-06 26.3 4.8 0.0012 18.3 5.2 3.2 2 1 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM38912.1 - 0.044 13.1 0.3 0.098 11.9 0.3 1.6 1 0 0 1 1 1 0 Protein tyrosine kinase DUF1878 PF08963.10 BAM38912.1 - 0.18 12.3 1.3 0.88 10.1 0.1 2.7 3 0 0 3 3 3 0 Protein of unknown function (DUF1878) RF-1 PF00472.20 BAM38913.1 - 6e-18 64.9 0.0 1.2e-17 63.9 0.0 1.5 1 0 0 1 1 1 1 RF-1 domain PCRF PF03462.18 BAM38913.1 - 9.6e-14 51.7 0.9 2.3e-07 30.9 0.7 2.3 2 0 0 2 2 2 2 PCRF domain TBP PF00352.21 BAM38914.1 - 9e-21 73.6 0.1 1.8e-08 34.2 0.0 3.9 3 1 0 3 3 3 3 Transcription factor TFIID (or TATA-binding protein, TBP) DUF2181 PF10223.9 BAM38914.1 - 0.066 12.7 0.0 0.14 11.6 0.0 1.5 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2181) UFC1 PF08694.11 BAM38915.1 - 2.1e-75 251.5 0.1 2.4e-75 251.4 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-fold modifier-conjugating enzyme 1 UQ_con PF00179.26 BAM38915.1 - 0.0091 15.7 0.0 0.023 14.3 0.0 1.7 1 1 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 BAM38915.1 - 0.045 14.0 0.0 0.056 13.7 0.0 1.1 1 0 0 1 1 1 0 RWD domain DUF5038 PF16441.5 BAM38918.1 - 0.87 9.6 4.1 5 7.2 0.8 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF5038) zf-C4H2 PF10146.9 BAM38918.1 - 3 8.1 6.8 0.21 11.9 0.3 2.4 3 0 0 3 3 3 0 Zinc finger-containing protein 7tm_7 PF08395.12 BAM38919.1 - 0.096 11.9 0.3 0.16 11.2 0.3 1.2 1 0 0 1 1 1 0 7tm Chemosensory receptor Adeno_E3 PF06040.11 BAM38919.1 - 0.54 10.4 4.4 0.62 10.3 0.5 2.5 2 0 0 2 2 2 0 Adenovirus E3 protein MA3 PF02847.17 BAM38920.1 - 0.0014 18.5 0.7 0.011 15.7 0.2 2.7 2 0 0 2 2 2 1 MA3 domain MIF4G_like_2 PF09090.11 BAM38920.1 - 0.015 14.8 0.0 0.035 13.6 0.0 1.6 1 0 0 1 1 1 0 MIF4G like ATP-synt PF00231.19 BAM38920.1 - 0.12 12.1 0.2 0.47 10.1 0.0 2.1 2 1 1 3 3 3 0 ATP synthase LRR_9 PF14580.6 BAM38922.1 - 7.4e-53 178.6 0.9 1.4e-52 177.7 0.9 1.4 1 1 0 1 1 1 1 Leucine-rich repeat LRR_4 PF12799.7 BAM38922.1 - 3.8e-09 36.7 10.4 2.1e-05 24.8 0.5 3.4 2 1 2 4 4 4 4 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 BAM38922.1 - 8.6e-08 31.8 8.5 6.4e-07 29.0 0.2 3.5 3 2 0 3 3 3 2 Leucine rich repeat LRR_1 PF00560.33 BAM38922.1 - 1.2 9.9 5.8 72 4.5 0.4 4.2 5 0 0 5 5 5 0 Leucine Rich Repeat LRR_6 PF13516.6 BAM38922.1 - 4.8 7.5 9.2 47 4.4 0.4 4.6 4 1 1 5 5 5 0 Leucine Rich repeat Ephrin_rec_like PF07699.13 BAM38923.1 - 6.8e-63 208.2 215.6 8.5e-09 35.0 5.9 22.1 20 2 1 22 22 22 17 Putative ephrin-receptor like PAN_4 PF14295.6 BAM38923.1 - 3.1e-06 27.0 3.4 0.0085 16.0 0.3 3.2 2 0 0 2 2 2 2 PAN domain ExbD PF02472.16 BAM38923.1 - 0.16 12.2 3.0 1.1 9.5 0.9 2.8 2 0 0 2 2 2 0 Biopolymer transport protein ExbD/TolR He_PIG PF05345.12 BAM38923.1 - 0.68 10.2 3.3 1.6 9.0 0.7 2.7 2 0 0 2 2 2 0 Putative Ig domain LRRFIP PF09738.9 BAM38923.1 - 1.6 8.1 7.6 0.56 9.6 1.4 2.5 2 0 0 2 2 2 0 LRRFIP family APG6_N PF17675.1 BAM38923.1 - 3.6 8.1 15.0 0.32 11.5 3.3 3.3 2 0 0 2 2 2 0 Apg6 coiled-coil region Tau95 PF09734.9 BAM38924.1 - 4.2e-28 98.9 0.0 6.9e-28 98.2 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase III transcription factor (TF)IIIC subunit HTH domain Tau95_N PF17682.1 BAM38924.1 - 0.00014 22.1 0.0 0.0075 16.5 0.0 2.4 1 1 0 1 1 1 1 Tau95 Triple barrel domain CTD PF12815.7 BAM38924.1 - 0.068 13.7 0.1 0.15 12.6 0.1 1.5 1 0 0 1 1 1 0 Spt5 C-terminal nonapeptide repeat binding Spt4 Mur_ligase_M PF08245.12 BAM38925.1 - 7.5e-11 42.4 0.1 1.9e-10 41.1 0.1 1.7 1 1 0 1 1 1 1 Mur ligase middle domain HEAT PF02985.22 BAM38926.1 - 0.042 14.1 7.7 4.3 7.8 0.0 5.9 7 0 0 7 7 7 0 HEAT repeat DUF4621 PF15414.6 BAM38926.1 - 0.1 11.5 0.0 0.2 10.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4621) Vps54 PF07928.12 BAM38926.1 - 2.2 8.7 5.4 11 6.4 0.9 3.6 3 0 0 3 3 3 0 Vps54-like protein Ribosomal_L29 PF00831.23 BAM38927.1 - 0.0052 16.7 4.0 0.0052 16.7 4.0 2.1 2 1 0 2 2 2 1 Ribosomal L29 protein Tn7_Tnp_TnsA_C PF08721.11 BAM38928.1 - 0.35 11.5 2.7 0.96 10.1 0.6 2.6 2 1 1 3 3 3 0 TnsA endonuclease C terminal IPPT PF01715.17 BAM38929.1 - 1.3e-57 195.2 1.1 5.3e-57 193.2 0.0 2.4 2 1 0 2 2 2 1 IPP transferase IPT PF01745.16 BAM38929.1 - 6e-06 25.8 0.1 6.2e-05 22.5 0.0 2.3 2 0 0 2 2 2 1 Isopentenyl transferase RAP PF08373.10 BAM38929.1 - 0.00081 19.4 0.4 0.00081 19.4 0.4 2.5 2 0 0 2 2 2 1 RAP domain AAA_33 PF13671.6 BAM38929.1 - 0.003 17.7 0.0 0.035 14.3 0.0 2.6 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 BAM38929.1 - 0.0032 18.0 0.2 3.2 8.3 0.0 3.0 2 0 0 2 2 2 2 AAA domain AAA_23 PF13476.6 BAM38929.1 - 0.68 10.4 4.2 9.8 6.6 0.1 2.8 2 1 0 2 2 2 0 AAA domain RRM_1 PF00076.22 BAM38930.1 - 4.7e-13 48.8 0.0 8.2e-13 48.0 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) MutS_V PF00488.21 BAM38936.1 - 7.1e-73 244.7 0.1 1.3e-72 243.8 0.1 1.5 1 0 0 1 1 1 1 MutS domain V MutS_III PF05192.18 BAM38936.1 - 5.8e-26 91.9 1.7 1.9e-25 90.2 1.6 1.9 2 0 0 2 2 2 1 MutS domain III MutS_IV PF05190.18 BAM38936.1 - 0.00016 21.9 3.3 0.00018 21.8 1.4 2.2 2 0 0 2 2 2 1 MutS family domain IV DUF2559 PF10832.8 BAM38936.1 - 0.03 14.4 0.9 2.6 8.2 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2559) IFT20 PF14931.6 BAM38936.1 - 2.1 8.6 7.2 2.5 8.3 0.9 2.5 2 0 0 2 2 2 0 Intraflagellar transport complex B, subunit 20 zf-DNL PF05180.12 BAM38938.1 - 1.8e-26 91.8 1.5 3.2e-26 91.0 1.5 1.4 1 0 0 1 1 1 1 DNL zinc finger DUF3834 PF12916.7 BAM38938.1 - 0.017 14.4 0.1 0.022 14.0 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3834) Elf1 PF05129.13 BAM38938.1 - 0.023 14.7 3.5 0.035 14.2 2.2 1.8 1 1 1 2 2 2 0 Transcription elongation factor Elf1 like Lar_restr_allev PF14354.6 BAM38938.1 - 0.024 15.0 0.1 0.057 13.8 0.1 1.7 2 0 0 2 2 2 0 Restriction alleviation protein Lar DUF2325 PF10087.9 BAM38938.1 - 0.095 12.8 2.2 0.1 12.8 1.1 1.7 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2325) zf-Sec23_Sec24 PF04810.15 BAM38938.1 - 0.2 11.7 3.4 0.76 9.9 0.3 2.3 2 0 0 2 2 2 0 Sec23/Sec24 zinc finger zf-C2H2_4 PF13894.6 BAM38938.1 - 3.4 8.8 7.0 13 7.0 0.1 3.3 3 0 0 3 3 3 0 C2H2-type zinc finger HGTP_anticodon PF03129.20 BAM38939.1 - 1.3e-21 76.6 0.4 3.5e-21 75.1 0.0 2.0 2 0 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 BAM38939.1 - 1.2e-08 35.2 0.0 5.4e-08 33.0 0.0 2.0 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_1c PF00749.21 BAM38939.1 - 0.11 11.4 0.0 0.18 10.6 0.0 1.3 1 0 0 1 1 1 0 tRNA synthetases class I (E and Q), catalytic domain CIAPIN1 PF05093.13 BAM38940.1 - 7.3e-20 71.4 13.2 4.1e-17 62.5 2.9 2.3 1 1 1 2 2 2 2 Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis Bromodomain PF00439.25 BAM38941.1 - 6.8e-21 74.1 0.5 1.8e-20 72.8 0.5 1.7 1 0 0 1 1 1 1 Bromodomain Acetyltransf_1 PF00583.25 BAM38941.1 - 9e-12 45.3 0.1 2e-11 44.1 0.1 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 BAM38941.1 - 2e-07 31.0 0.1 4.2e-07 30.0 0.1 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 BAM38941.1 - 5.8e-07 29.8 0.7 1.2e-06 28.8 0.7 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 BAM38941.1 - 0.016 15.2 0.0 0.036 14.0 0.0 1.6 1 0 0 1 1 1 0 FR47-like protein Acetyltransf_9 PF13527.7 BAM38941.1 - 0.028 14.5 0.2 0.096 12.8 0.0 2.0 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain Dopey_N PF04118.14 BAM38943.1 - 5.1e-89 298.4 4.9 6.8e-89 298.0 3.2 2.2 2 0 0 2 2 2 1 Dopey, N-terminal IMCp PF12314.8 BAM38944.1 - 1.8e-11 44.1 59.9 9.7e-11 41.8 22.9 3.5 4 1 1 5 5 5 2 Inner membrane complex protein DUF2922 PF11148.8 BAM38944.1 - 0.071 12.8 4.1 0.16 11.7 0.7 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF2922) Rhomboid PF01694.22 BAM38947.1 - 7.4e-15 55.2 21.5 1.9e-12 47.4 7.7 2.7 2 1 1 3 3 3 2 Rhomboid family Thioredoxin PF00085.20 BAM38948.1 - 6e-12 45.5 0.0 1.3e-11 44.3 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin OST3_OST6 PF04756.13 BAM38948.1 - 0.032 13.6 0.0 0.049 13.0 0.0 1.2 1 0 0 1 1 1 0 OST3 / OST6 family, transporter family HVSL PF09749.9 BAM38949.1 - 8.9e-25 87.5 0.5 1.2e-24 87.1 0.5 1.4 1 1 0 1 1 1 1 Uncharacterised conserved protein 2_5_RNA_ligase2 PF13563.6 BAM38949.1 - 0.028 14.3 0.0 0.047 13.6 0.0 1.6 1 1 0 1 1 1 0 2'-5' RNA ligase superfamily PITH PF06201.13 BAM38951.1 - 2.1e-31 109.2 0.0 2.3e-31 109.0 0.0 1.0 1 0 0 1 1 1 1 PITH domain OTCace_N PF02729.21 BAM38952.1 - 3.5e-46 156.9 0.0 5.6e-46 156.2 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 BAM38952.1 - 7.2e-34 117.1 0.1 1e-33 116.7 0.1 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MBF1 PF08523.10 BAM38954.1 - 0.039 14.4 0.4 0.065 13.7 0.4 1.3 1 0 0 1 1 1 0 Multiprotein bridging factor 1 FHA PF00498.26 BAM38955.1 - 3.4e-13 49.7 0.2 6.1e-12 45.7 0.1 2.4 2 0 0 2 2 2 1 FHA domain RINGv PF12906.7 BAM38955.1 - 2.6e-09 37.1 4.5 1.5e-08 34.6 2.2 2.8 2 0 0 2 2 2 1 RING-variant domain Yop-YscD_cpl PF16697.5 BAM38955.1 - 1.6e-05 25.1 0.0 0.00046 20.5 0.0 2.4 2 0 0 2 2 2 1 Inner membrane component of T3SS, cytoplasmic domain HSP70 PF00012.20 BAM38956.1 - 1.6e-51 175.3 22.6 1e-48 166.0 0.2 3.9 1 1 2 3 3 3 2 Hsp70 protein MreB_Mbl PF06723.13 BAM38956.1 - 0.00011 21.2 0.0 0.00033 19.6 0.0 1.7 1 1 0 1 1 1 1 MreB/Mbl protein Collagen PF01391.18 BAM38957.1 - 5.5 6.8 8.3 9.3 6.1 8.3 1.3 1 0 0 1 1 1 0 Collagen triple helix repeat (20 copies) GCV_T PF01571.21 BAM38958.1 - 3.9e-36 124.7 0.0 1.6e-35 122.8 0.0 1.8 1 1 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 BAM38958.1 - 4.3e-05 23.4 0.0 9.3e-05 22.3 0.0 1.6 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain RYDR_ITPR PF01365.21 BAM38958.1 - 0.074 12.5 0.3 0.16 11.4 0.3 1.5 1 0 0 1 1 1 0 RIH domain MFS_1 PF07690.16 BAM38959.1 - 0.00078 18.5 30.2 0.00078 18.5 30.2 5.3 1 1 2 3 3 3 1 Major Facilitator Superfamily GRP PF07172.11 BAM38959.1 - 1.7 9.4 12.9 2.6e+02 2.4 14.6 2.7 2 0 0 2 2 2 0 Glycine rich protein family TMEM100 PF16311.5 BAM38959.1 - 1.8 8.2 6.3 2.3 7.8 1.5 2.6 2 0 0 2 2 2 0 Transmembrane protein 100 WD40 PF00400.32 BAM38960.1 - 2.9e-23 81.7 16.1 0.0034 18.2 0.0 8.0 7 1 0 7 7 7 6 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM38960.1 - 2.5e-12 46.9 0.0 0.0022 18.3 0.0 5.0 2 1 3 5 5 5 5 Anaphase-promoting complex subunit 4 WD40 domain PRP4 PF08799.11 BAM38960.1 - 3.1e-10 39.4 2.4 5.3e-10 38.7 2.4 1.4 1 0 0 1 1 1 1 pre-mRNA processing factor 4 (PRP4) like eIF2A PF08662.11 BAM38960.1 - 0.00074 19.4 0.4 0.73 9.7 0.1 3.3 2 2 2 4 4 4 2 Eukaryotic translation initiation factor eIF2A PQQ_2 PF13360.6 BAM38960.1 - 0.046 13.3 0.0 0.083 12.5 0.0 1.6 1 1 0 1 1 1 0 PQQ-like domain VPS13_C PF16909.5 BAM38961.1 - 8.6e-11 41.9 0.0 3.2e-10 40.1 0.0 1.9 2 0 0 2 2 2 1 Vacuolar-sorting-associated 13 protein C-terminal Kelch_1 PF01344.25 BAM38962.1 - 1.8e-51 171.5 0.7 2.3e-10 39.9 0.0 6.4 6 0 0 6 6 6 6 Kelch motif Kelch_6 PF13964.6 BAM38962.1 - 9.2e-29 98.8 0.2 4.2e-05 23.7 0.0 6.3 5 1 1 6 6 6 5 Kelch motif Kelch_4 PF13418.6 BAM38962.1 - 1.1e-22 79.7 0.3 8.3e-05 22.5 0.0 6.1 5 2 2 7 7 7 3 Galactose oxidase, central domain BTB_2 PF02214.22 BAM38962.1 - 1.7e-17 63.5 0.0 5.7e-17 61.9 0.0 1.9 1 0 0 1 1 1 1 BTB/POZ domain Kelch_3 PF13415.6 BAM38962.1 - 6.1e-16 58.3 0.3 0.0013 19.0 0.0 6.0 6 0 0 6 6 6 4 Galactose oxidase, central domain Kelch_2 PF07646.15 BAM38962.1 - 1.5e-11 43.8 1.5 0.2 11.7 0.0 6.1 6 0 0 6 6 6 4 Kelch motif Kelch_5 PF13854.6 BAM38962.1 - 9.9e-10 38.2 3.9 0.66 10.0 0.1 6.5 7 0 0 7 7 7 3 Kelch motif DUF501 PF04417.12 BAM38962.1 - 0.0017 18.1 0.6 0.0017 18.1 0.6 2.1 1 1 1 2 2 2 1 Protein of unknown function (DUF501) HALZ PF02183.18 BAM38962.1 - 0.2 11.9 4.7 0.72 10.1 0.8 2.9 2 0 0 2 2 2 0 Homeobox associated leucine zipper Atg14 PF10186.9 BAM38962.1 - 0.47 9.5 8.4 0.79 8.7 8.4 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 JIP_LZII PF16471.5 BAM38962.1 - 0.56 10.4 9.8 0.056 13.6 2.8 2.4 2 0 0 2 2 2 0 JNK-interacting protein leucine zipper II Exonuc_VII_L PF02601.15 BAM38962.1 - 3.3 7.2 9.9 4.9 6.6 9.9 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit TMPIT PF07851.13 BAM38962.1 - 9.7 5.3 11.4 3.4e+02 0.3 11.4 2.1 1 1 0 1 1 1 0 TMPIT-like protein UDPGP PF01704.18 BAM38963.1 - 4.4e-14 51.9 0.0 2.8e-13 49.3 0.0 1.9 1 1 0 1 1 1 1 UTP--glucose-1-phosphate uridylyltransferase NTP_transf_3 PF12804.7 BAM38963.1 - 0.00011 22.6 0.0 0.00017 22.0 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain DUF192 PF02643.15 BAM38964.1 - 0.045 13.9 0.0 0.11 12.7 0.0 1.6 1 0 0 1 1 1 0 Uncharacterized ACR, COG1430 GSu_C4xC__C2xCH PF09698.10 BAM38964.1 - 0.12 13.2 0.0 0.28 12.0 0.0 1.5 1 0 0 1 1 1 0 Geobacter CxxxxCH...CXXCH motif (GSu_C4xC__C2xCH) AP2 PF00847.20 BAM38965.1 - 1.7e-07 31.4 2.2 8.1e-05 22.8 0.1 3.8 4 0 0 4 4 4 2 AP2 domain PEPCK_ATP PF01293.20 BAM38966.1 - 2.9e-186 619.7 0.0 3.6e-168 560.0 0.0 3.0 2 1 0 2 2 2 2 Phosphoenolpyruvate carboxykinase AAA_16 PF13191.6 BAM38966.1 - 0.043 14.2 0.0 0.078 13.4 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_33 PF13671.6 BAM38966.1 - 0.12 12.6 0.0 0.25 11.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 BAM38966.1 - 0.12 12.1 0.1 0.28 10.9 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 BAM38966.1 - 0.16 12.5 0.0 0.28 11.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain RNB PF00773.19 BAM38967.1 - 2.2e-99 332.9 1.1 4.1e-99 332.0 1.1 1.4 1 0 0 1 1 1 1 RNB domain OB_Dis3 PF17849.1 BAM38967.1 - 2.3e-16 59.6 0.0 5.8e-16 58.3 0.0 1.7 1 0 0 1 1 1 1 Dis3-like cold-shock domain 2 (CSD2) CSD2 PF17876.1 BAM38967.1 - 1e-07 32.0 0.1 4.3e-07 30.0 0.1 2.0 2 0 0 2 2 2 1 Cold shock domain Rep_fac-A_3 PF08661.11 BAM38967.1 - 0.0024 18.2 0.0 0.0075 16.6 0.0 1.9 1 0 0 1 1 1 1 Replication factor A protein 3 Rrp44_CSD1 PF17216.3 BAM38967.1 - 0.021 14.5 1.0 0.24 11.1 0.0 2.4 2 0 0 2 2 2 0 Rrp44-like cold shock domain RRM_1 PF00076.22 BAM38968.1 - 1.2e-54 182.0 1.1 7.5e-19 67.3 0.0 3.5 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RNA_bind PF08675.11 BAM38968.1 - 1.8e-11 43.9 0.0 0.0014 18.6 0.0 3.8 3 0 0 3 3 3 3 RNA binding domain WW PF00397.26 BAM38968.1 - 7.9e-11 41.9 0.9 1.6e-10 40.9 0.9 1.5 1 0 0 1 1 1 1 WW domain RRM_5 PF13893.6 BAM38968.1 - 4e-10 39.3 0.0 0.00048 19.7 0.0 3.2 2 1 1 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 BAM38968.1 - 8.4e-08 32.2 0.1 0.09 12.9 0.0 3.4 3 0 0 3 3 3 2 RNA recognition motif PHM7_cyt PF14703.6 BAM38968.1 - 0.00079 19.7 0.3 3.5 7.8 0.0 3.8 3 2 2 5 5 5 2 Cytosolic domain of 10TM putative phosphate transporter BRAP2 PF07576.12 BAM38968.1 - 0.0029 17.8 0.1 3.2 8.1 0.0 3.1 3 0 0 3 3 3 1 BRCA1-associated protein 2 Glyco_hyd_101C PF17451.2 BAM38968.1 - 0.16 12.3 0.1 0.32 11.3 0.1 1.4 1 0 0 1 1 1 0 Glycosyl hydrolase 101 beta sandwich domain Exo_endo_phos PF03372.23 BAM38969.1 - 1.1e-08 34.8 0.0 2e-07 30.8 0.0 2.6 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Sec2p PF06428.11 BAM38971.1 - 0.0073 16.3 1.4 0.009 16.0 0.4 1.7 2 0 0 2 2 2 1 GDP/GTP exchange factor Sec2p DUF2433 PF10360.9 BAM38971.1 - 0.043 13.9 0.3 0.089 12.9 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2433) PI_PP_I PF18363.1 BAM38971.1 - 2.1 8.6 6.0 0.74 10.0 1.9 2.3 2 1 1 3 3 3 0 Phosphoinositide phosphatase insertion domain Myosin_head PF00063.21 BAM38975.1 - 2.2e-179 597.9 0.1 2.7e-179 597.6 0.1 1.1 1 0 0 1 1 1 1 Myosin head (motor domain) AAA_16 PF13191.6 BAM38975.1 - 0.0095 16.3 0.0 0.029 14.8 0.0 1.9 1 1 0 1 1 1 1 AAA ATPase domain FlaE PF07559.14 BAM38975.1 - 0.018 15.6 0.0 0.51 10.9 0.0 2.5 2 1 0 2 2 2 0 Flagellar basal body protein FlaE Sigma54_activat PF00158.26 BAM38975.1 - 0.024 14.3 0.0 0.059 13.1 0.0 1.6 1 0 0 1 1 1 0 Sigma-54 interaction domain CbiA PF01656.23 BAM38975.1 - 0.053 13.6 0.1 0.16 12.0 0.1 1.9 2 1 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain ABC_tran PF00005.27 BAM38975.1 - 0.074 13.6 0.1 0.2 12.2 0.1 1.7 1 1 0 1 1 1 0 ABC transporter WTF PF03303.13 BAM38976.1 - 0.41 10.3 1.2 0.76 9.5 1.2 1.4 1 0 0 1 1 1 0 WTF protein FAINT PF04385.15 BAM38977.1 - 0.12 12.5 28.4 0.34 11.0 2.7 3.8 3 1 0 3 3 3 0 Domain of unknown function, DUF529 CIA30 PF08547.12 BAM38977.1 - 0.25 11.3 3.4 11 6.0 0.2 2.6 2 1 0 2 2 2 0 Complex I intermediate-associated protein 30 (CIA30) FAINT PF04385.15 BAM38978.1 - 4.2e-15 55.6 18.3 1.3e-06 28.4 1.2 4.6 4 0 0 4 4 4 4 Domain of unknown function, DUF529 FAINT PF04385.15 BAM38979.1 - 3.5e-10 39.8 10.5 0.046 13.8 0.3 4.4 4 0 0 4 4 4 4 Domain of unknown function, DUF529 FAINT PF04385.15 BAM38980.1 - 4.6e-12 45.8 18.2 1.4e-06 28.3 1.5 3.4 3 0 0 3 3 3 3 Domain of unknown function, DUF529 CBFD_NFYB_HMF PF00808.23 BAM38981.1 - 0.0038 17.5 0.1 0.0094 16.2 0.0 1.8 2 0 0 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone NOC3p PF07540.11 BAM38981.1 - 0.097 13.1 1.2 14 6.2 0.1 2.3 2 0 0 2 2 2 0 Nucleolar complex-associated protein Ribosomal_S13_N PF08069.12 BAM38982.1 - 1.5e-26 92.2 0.5 2.8e-26 91.3 0.5 1.5 1 0 0 1 1 1 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 BAM38982.1 - 3.6e-14 52.7 1.5 6.9e-14 51.8 0.9 1.7 2 0 0 2 2 2 1 Ribosomal protein S15 Flavokinase PF01687.17 BAM38983.1 - 1.7e-21 76.6 0.0 3.6e-21 75.5 0.0 1.6 1 0 0 1 1 1 1 Riboflavin kinase FtsJ PF01728.19 BAM38983.1 - 0.084 13.0 0.2 0.18 11.9 0.2 1.8 1 1 0 1 1 1 0 FtsJ-like methyltransferase HSP70 PF00012.20 BAM38984.1 - 7.2e-22 77.3 5.6 2e-09 36.2 0.0 3.6 3 1 1 4 4 4 2 Hsp70 protein FAINT PF04385.15 BAM38984.1 - 2.1e-10 40.5 21.1 5.6e-07 29.5 3.0 3.7 3 0 0 3 3 3 2 Domain of unknown function, DUF529 TPR_1 PF00515.28 BAM38984.1 - 4.6e-09 35.7 2.8 9.9e-05 22.0 0.1 4.3 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 BAM38984.1 - 8.4e-07 28.7 1.0 0.0031 17.5 0.1 3.8 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_8 PF13181.6 BAM38984.1 - 9.4e-05 22.3 0.4 0.069 13.4 0.0 3.9 3 1 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 BAM38984.1 - 0.0042 17.6 0.0 0.15 12.6 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 BAM38984.1 - 0.0058 16.3 0.2 5.6 6.7 0.0 3.3 2 1 1 3 3 3 2 TPR repeat TPR_17 PF13431.6 BAM38984.1 - 0.051 14.0 1.8 0.059 13.8 0.1 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_6 PF13174.6 BAM38984.1 - 0.098 13.3 0.1 2.4 9.0 0.1 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_9 PF13371.6 BAM38984.1 - 0.12 12.5 0.0 0.26 11.5 0.0 1.4 1 0 0 1 1 1 0 Tetratricopeptide repeat Ribosom_S12_S23 PF00164.25 BAM38985.1 - 6.3e-26 90.2 0.3 1.3e-25 89.2 0.3 1.5 1 0 0 1 1 1 1 Ribosomal protein S12/S23 NusG_add PF18298.1 BAM38985.1 - 0.12 12.6 0.0 0.37 11.0 0.0 1.8 1 0 0 1 1 1 0 NusG additional domain EMP24_GP25L PF01105.24 BAM38986.1 - 3.9e-38 131.2 2.8 4.4e-38 131.0 2.8 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD Innexin PF00876.18 BAM38986.1 - 0.0022 17.4 1.3 0.0029 17.0 1.3 1.1 1 0 0 1 1 1 1 Innexin DUF2569 PF10754.9 BAM38986.1 - 0.017 15.5 1.2 0.03 14.8 1.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2569) MCM PF00493.23 BAM38987.1 - 5.7e-71 238.2 0.0 1.8e-70 236.5 0.0 1.8 1 1 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 BAM38987.1 - 3.9e-22 78.5 0.1 1.1e-21 77.0 0.1 1.8 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 BAM38987.1 - 1.9e-20 73.1 1.3 6e-20 71.5 1.3 1.9 1 0 0 1 1 1 1 MCM AAA-lid domain Mg_chelatase PF01078.21 BAM38987.1 - 2.9e-05 23.6 0.0 0.057 12.8 0.0 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 BAM38987.1 - 0.0072 16.3 0.0 0.032 14.2 0.0 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 BAM38987.1 - 0.029 14.8 0.5 0.12 12.7 0.0 2.3 2 0 0 2 2 2 0 AAA ATPase domain AAA_3 PF07726.11 BAM38987.1 - 0.05 13.5 0.4 1.4 8.8 0.1 3.2 3 1 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 BAM38987.1 - 0.071 13.4 0.4 0.26 11.6 0.0 2.1 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 BAM38987.1 - 0.092 12.7 0.0 1.4 8.9 0.0 2.3 2 0 0 2 2 2 0 NACHT domain UQ_con PF00179.26 BAM38988.1 - 7e-45 152.1 0.0 7.9e-45 151.9 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme UEV PF05743.13 BAM38988.1 - 0.025 14.5 0.1 0.048 13.5 0.1 1.5 1 1 0 1 1 1 0 UEV domain Prok-E2_B PF14461.6 BAM38988.1 - 0.032 13.9 0.0 0.04 13.6 0.0 1.2 1 0 0 1 1 1 0 Prokaryotic E2 family B Nicastrin PF05450.15 BAM38989.1 - 9.7e-05 21.9 0.1 0.00019 21.0 0.1 1.5 1 0 0 1 1 1 1 Nicastrin KxDL PF10241.9 BAM38990.1 - 0.008 16.4 4.0 0.049 13.9 0.5 2.7 2 1 0 2 2 2 1 Uncharacterized conserved protein Rbsn PF11464.8 BAM38990.1 - 0.034 13.9 0.3 0.2 11.4 0.0 2.5 2 0 0 2 2 2 0 Rabenosyn Rab binding domain OmpH PF03938.14 BAM38990.1 - 0.24 11.8 6.2 0.25 11.7 1.7 2.2 1 1 0 2 2 2 0 Outer membrane protein (OmpH-like) PRKCSH-like PF12999.7 BAM38990.1 - 0.6 9.9 7.4 0.14 12.0 0.6 2.3 1 1 1 2 2 2 0 Glucosidase II beta subunit-like Baculo_PEP_C PF04513.12 BAM38990.1 - 2.3 8.3 14.4 4.1 7.4 2.7 3.0 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Med9 PF07544.13 BAM38990.1 - 4.3 7.5 9.0 1.1 9.4 2.4 2.9 2 1 1 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 PHD PF00628.29 BAM38991.1 - 0.00014 21.7 1.2 0.00014 21.7 1.2 2.9 3 0 0 3 3 3 1 PHD-finger DUF4537 PF15057.6 BAM38991.1 - 0.045 13.8 0.0 0.13 12.3 0.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4537) DUF1257 PF06868.11 BAM38991.1 - 0.12 12.6 0.6 0.4 11.0 0.6 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1257) Phg_2220_C PF09524.10 BAM38991.1 - 0.12 12.4 1.1 0.62 10.2 1.1 2.3 1 0 0 1 1 1 0 Conserved phage C-terminus (Phg_2220_C) zf-RING_2 PF13639.6 BAM38991.1 - 0.16 12.3 3.0 0.5 10.7 0.6 2.7 2 0 0 2 2 2 0 Ring finger domain Period_C PF12114.8 BAM38992.1 - 0.024 14.2 0.8 0.035 13.7 0.8 1.1 1 0 0 1 1 1 0 Period protein 2/3C-terminal region BSP_II PF05432.11 BAM38993.1 - 0.26 11.0 7.1 0.38 10.4 7.1 1.1 1 0 0 1 1 1 0 Bone sialoprotein II (BSP-II) DUF4231 PF14015.6 BAM38996.1 - 0.035 14.6 4.5 0.071 13.6 0.4 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF4231) Syja_N PF02383.18 BAM38998.1 - 4.6e-54 183.9 1.9 7e-54 183.3 1.9 1.3 1 0 0 1 1 1 1 SacI homology domain ABC_tran PF00005.27 BAM39000.1 - 2e-33 115.8 0.0 1.8e-17 64.1 0.0 2.6 2 0 0 2 2 2 2 ABC transporter RsgA_GTPase PF03193.16 BAM39000.1 - 1.1e-05 25.4 0.7 0.063 13.2 0.1 2.5 2 0 0 2 2 2 2 RsgA GTPase Zeta_toxin PF06414.12 BAM39000.1 - 1.6e-05 24.3 0.5 0.026 13.8 0.0 2.3 2 0 0 2 2 2 2 Zeta toxin MeaB PF03308.16 BAM39000.1 - 3.6e-05 22.9 0.2 0.16 10.9 0.2 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_29 PF13555.6 BAM39000.1 - 0.00019 21.1 0.4 0.68 9.7 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_30 PF13604.6 BAM39000.1 - 0.00043 20.1 0.8 0.016 15.0 0.1 2.3 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 BAM39000.1 - 0.006 17.1 1.7 1.2 9.6 0.1 2.9 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 BAM39000.1 - 0.0073 16.7 0.0 0.53 10.6 0.0 2.4 2 0 0 2 2 2 1 AAA ATPase domain MMR_HSR1 PF01926.23 BAM39000.1 - 0.012 15.7 0.5 3.1 7.9 0.1 3.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase FtsK_SpoIIIE PF01580.18 BAM39000.1 - 0.032 13.6 0.2 1.3 8.3 0.0 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family T2SSE PF00437.20 BAM39000.1 - 0.033 13.2 0.5 0.48 9.4 0.1 2.2 2 0 0 2 2 2 0 Type II/IV secretion system protein cobW PF02492.19 BAM39000.1 - 0.049 13.2 2.1 2.5 7.6 0.1 2.6 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain TsaE PF02367.17 BAM39000.1 - 0.051 13.6 0.3 8.1 6.5 0.1 2.4 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DnaB_C PF03796.15 BAM39000.1 - 0.1 11.9 0.1 8.7 5.6 0.1 2.5 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain ATP_bind_1 PF03029.17 BAM39000.1 - 0.11 12.3 5.7 3.2 7.5 0.2 3.3 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 BAM39000.1 - 0.11 12.7 0.3 23 5.3 0.0 3.0 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 BAM39000.1 - 0.19 11.6 2.4 3.4 7.6 0.3 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_25 PF13481.6 BAM39000.1 - 0.21 11.2 0.1 6 6.4 0.0 2.3 2 0 0 2 2 2 0 AAA domain SMC_N PF02463.19 BAM39000.1 - 0.22 10.9 0.9 2.8 7.3 0.1 2.4 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain DUF815 PF05673.13 BAM39000.1 - 0.35 10.0 1.8 2.4 7.3 0.2 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF815) TrwB_AAD_bind PF10412.9 BAM39000.1 - 0.39 9.6 1.9 8.3 5.2 0.0 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain ATPase_2 PF01637.18 BAM39000.1 - 0.72 9.7 5.3 11 5.9 1.8 3.1 2 1 0 2 2 2 0 ATPase domain predominantly from Archaea NTPase_1 PF03266.15 BAM39000.1 - 6.4 6.7 5.5 21 5.0 0.2 2.8 3 0 0 3 3 3 0 NTPase Spt4 PF06093.13 BAM39001.1 - 3.4e-29 100.7 0.2 4.5e-29 100.4 0.2 1.2 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger GLE1 PF07817.13 BAM39002.1 - 3.2e-12 46.2 1.2 7e-12 45.1 1.2 1.6 1 1 0 1 1 1 1 GLE1-like protein Erf4 PF10256.9 BAM39002.1 - 0.067 13.3 1.6 0.2 11.8 0.2 2.6 3 0 0 3 3 3 0 Golgin subfamily A member 7/ERF4 family TERB2 PF15101.6 BAM39002.1 - 7.3 6.6 7.4 1.8 8.5 2.3 2.1 1 1 0 2 2 2 0 Telomere-associated protein TERB2 FAINT PF04385.15 BAM39003.1 - 3.9e-13 49.3 7.0 2.7e-08 33.8 3.2 2.6 2 0 0 2 2 2 2 Domain of unknown function, DUF529 GAS PF13851.6 BAM39003.1 - 0.013 14.9 0.0 0.02 14.2 0.0 1.3 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding Prefoldin_2 PF01920.20 BAM39003.1 - 0.021 14.8 0.0 3.2 7.7 0.0 2.4 2 0 0 2 2 2 0 Prefoldin subunit bZIP_1 PF00170.21 BAM39003.1 - 0.033 14.3 0.3 0.091 12.9 0.2 1.8 1 1 0 1 1 1 0 bZIP transcription factor HALZ PF02183.18 BAM39003.1 - 0.053 13.8 2.2 1.6 9.0 0.3 2.4 1 1 1 2 2 2 0 Homeobox associated leucine zipper ZapB PF06005.12 BAM39003.1 - 0.06 13.8 0.1 0.12 12.8 0.1 1.4 1 0 0 1 1 1 0 Cell division protein ZapB CENP-F_leu_zip PF10473.9 BAM39003.1 - 0.078 13.0 0.1 0.11 12.5 0.1 1.2 1 0 0 1 1 1 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF1664 PF07889.12 BAM39003.1 - 0.1 12.6 0.0 0.18 11.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) PI3_PI4_kinase PF00454.27 BAM39004.1 - 7.8e-14 52.1 0.1 8.8e-13 48.6 0.0 2.3 2 0 0 2 2 2 1 Phosphatidylinositol 3- and 4-kinase Thiolase_N PF00108.23 BAM39005.1 - 4e-17 62.4 0.0 4.9e-15 55.6 0.0 2.0 1 1 1 2 2 2 2 Thiolase, N-terminal domain Bax1-I PF01027.20 BAM39007.1 - 1.2e-22 80.7 29.4 1.4e-22 80.5 29.4 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 DUF981 PF06168.11 BAM39007.1 - 1.8 8.4 17.8 0.043 13.7 9.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF981) Bax1-I PF01027.20 BAM39008.1 - 2.7e-28 99.2 36.8 3.1e-28 99.0 36.8 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 DUF2339 PF10101.9 BAM39008.1 - 0.1 11.2 15.5 0.13 10.8 15.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2339) DUF2070 PF09843.9 BAM39008.1 - 3 6.0 28.5 3.8 5.7 28.5 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Pho86 PF11124.8 BAM39008.1 - 8.7 5.7 10.0 6.8 6.1 8.3 1.6 1 1 0 1 1 1 0 Inorganic phosphate transporter Pho86 Bax1-I PF01027.20 BAM39009.1 - 1.1e-05 25.4 25.6 1.4e-05 25.0 25.6 1.1 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 DUF2207 PF09972.9 BAM39009.1 - 0.005 15.7 1.5 0.005 15.7 1.5 2.9 1 1 1 2 2 2 1 Predicted membrane protein (DUF2207) Asp-B-Hydro_N PF05279.11 BAM39009.1 - 0.48 10.5 11.5 0.69 9.9 11.5 1.1 1 0 0 1 1 1 0 Aspartyl beta-hydroxylase N-terminal region PTPlike_phytase PF14566.6 BAM39009.1 - 1.7 8.7 5.8 2.7 8.1 5.8 1.2 1 0 0 1 1 1 0 Inositol hexakisphosphate DUF2721 PF11026.8 BAM39009.1 - 3.6 7.5 14.6 0.32 10.9 0.1 3.2 1 1 2 3 3 3 0 Protein of unknown function (DUF2721) PMSI1 PF15322.6 BAM39009.1 - 4.4 6.7 5.5 6 6.2 5.5 1.1 1 0 0 1 1 1 0 Protein missing in infertile sperm 1, putative 7TMR-DISM_7TM PF07695.11 BAM39009.1 - 6 6.7 28.5 8.8 6.2 17.7 2.1 1 1 1 2 2 2 0 7TM diverse intracellular signalling Bax1-I PF01027.20 BAM39010.1 - 1.7e-21 77.0 30.3 1.9e-21 76.8 30.3 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 Orthoreo_P10 PF07204.11 BAM39010.1 - 0.022 14.7 1.0 0.089 12.8 1.0 2.1 1 1 0 1 1 1 0 Orthoreovirus membrane fusion protein p10 DUF4910 PF16254.5 BAM39010.1 - 0.19 10.6 0.3 0.28 10.0 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4910) Apolipoprotein PF01442.18 BAM39011.1 - 7.8e-08 32.4 27.8 0.00026 20.9 3.1 5.1 2 1 3 5 5 5 4 Apolipoprotein A1/A4/E domain RhoGAP-FF1 PF16512.5 BAM39011.1 - 9.1 7.0 11.2 7.9 7.2 0.2 4.6 5 0 0 5 5 5 0 p190-A and -B Rho GAPs FF domain DHHC PF01529.20 BAM39012.1 - 1.2 9.2 5.5 0.6 10.2 0.2 2.7 3 0 0 3 3 3 0 DHHC palmitoyltransferase cwf21 PF08312.12 BAM39013.1 - 4e-08 33.3 3.9 6.5e-08 32.6 3.9 1.4 1 0 0 1 1 1 1 cwf21 domain GTP_EFTU PF00009.27 BAM39015.1 - 2e-62 210.2 0.1 3e-62 209.6 0.1 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 BAM39015.1 - 9.3e-32 109.4 0.0 6e-31 106.7 0.0 2.4 3 0 0 3 3 3 1 Elongation factor G, domain IV EFG_C PF00679.24 BAM39015.1 - 5.9e-22 77.5 0.0 1.1e-21 76.6 0.0 1.5 1 0 0 1 1 1 1 Elongation factor G C-terminus EFG_II PF14492.6 BAM39015.1 - 5.6e-14 52.0 0.0 1.2e-13 51.0 0.0 1.5 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 BAM39015.1 - 3.1e-13 49.9 0.1 8.6e-13 48.5 0.1 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 BAM39015.1 - 0.0015 18.6 0.1 0.003 17.6 0.1 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase RF3_C PF16658.5 BAM39015.1 - 0.059 13.2 0.0 0.12 12.2 0.0 1.5 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain zf-Nse PF11789.8 BAM39016.1 - 5.6e-05 22.9 4.6 0.0022 17.7 0.3 2.5 1 1 1 2 2 2 2 Zinc-finger of the MIZ type in Nse subunit zf-C2H2_aberr PF17017.5 BAM39016.1 - 0.007 16.5 1.9 0.0086 16.2 1.9 1.2 1 0 0 1 1 1 1 Aberrant zinc-finger SIR2 PF02146.17 BAM39017.1 - 3.5e-26 92.2 0.3 6.9e-18 65.2 0.1 3.2 2 1 1 3 3 3 2 Sir2 family AAA_lid_4 PF17864.1 BAM39017.1 - 0.033 13.9 0.1 3.3 7.5 0.0 3.3 3 0 0 3 3 3 0 RuvB AAA lid domain V-SNARE_C PF12352.8 BAM39018.1 - 1.3e-07 31.7 3.7 1.6e-07 31.5 2.6 1.7 2 0 0 2 2 2 1 Snare region anchored in the vesicle membrane C-terminus CREPT PF16566.5 BAM39018.1 - 0.017 15.3 1.3 0.017 15.3 1.3 1.9 2 0 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour DP PF08781.10 BAM39018.1 - 0.093 12.6 5.3 0.05 13.5 2.3 2.1 2 0 0 2 2 2 0 Transcription factor DP MRFAP1 PF15155.6 BAM39018.1 - 0.12 13.0 2.1 0.14 12.7 0.2 2.0 2 1 1 3 3 3 0 MORF4 family-associated protein1 Sid-5 PF17204.3 BAM39018.1 - 0.19 11.9 0.9 0.37 11.0 0.9 1.4 1 0 0 1 1 1 0 Sid-5 family BST2 PF16716.5 BAM39018.1 - 0.31 11.6 6.8 10 6.8 0.0 2.6 2 1 0 2 2 2 0 Bone marrow stromal antigen 2 PRKCSH-like PF12999.7 BAM39018.1 - 0.64 9.8 4.8 0.97 9.2 1.1 2.3 2 0 0 2 2 2 0 Glucosidase II beta subunit-like Sec20 PF03908.13 BAM39018.1 - 1.2 9.1 5.6 0.27 11.2 0.5 2.5 3 1 0 3 3 3 0 Sec20 Sec2p PF06428.11 BAM39018.1 - 1.8 8.6 9.7 0.2 11.7 3.4 2.4 3 0 0 3 3 3 0 GDP/GTP exchange factor Sec2p CDC37_N PF03234.14 BAM39019.1 - 0.001 20.0 3.7 0.001 20.0 3.7 2.3 3 1 0 3 3 3 1 Cdc37 N terminal kinase binding CS PF04969.16 BAM39021.1 - 1.8e-14 54.5 0.7 1.8e-14 54.5 0.7 1.7 2 0 0 2 2 2 1 CS domain Nudc_N PF14050.6 BAM39021.1 - 2.3e-12 46.7 0.0 4.4e-12 45.8 0.0 1.5 1 0 0 1 1 1 1 N-terminal conserved domain of Nudc. M60-like_N PF17291.2 BAM39021.1 - 0.057 13.3 0.0 8.5 6.3 0.0 2.5 2 0 0 2 2 2 0 N-terminal domain of M60-like peptidases Med26_C PF15693.5 BAM39021.1 - 5.4 7.1 8.9 16 5.6 0.1 3.1 3 0 0 3 3 3 0 Mediator complex subunit 26 C-terminal AMP-binding PF00501.28 BAM39023.1 - 1.3e-70 238.1 0.0 2e-70 237.5 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme LRR_4 PF12799.7 BAM39023.1 - 1.9e-13 50.3 30.3 3.3e-05 24.1 2.4 5.8 2 1 2 5 5 5 5 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 BAM39023.1 - 5e-11 42.2 25.0 1.9e-07 30.8 4.0 4.1 4 0 0 4 4 4 2 Leucine rich repeat LRR_9 PF14580.6 BAM39023.1 - 3.9e-05 23.2 12.6 0.0013 18.3 2.5 2.8 1 1 1 2 2 2 2 Leucine-rich repeat AMP-binding_C PF13193.6 BAM39023.1 - 0.0071 17.3 0.1 0.015 16.3 0.1 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DER1 PF04511.15 BAM39024.1 - 6.1e-06 26.3 2.6 7.2e-06 26.1 2.6 1.1 1 0 0 1 1 1 1 Der1-like family FAINT PF04385.15 BAM39027.1 - 2.3e-08 34.0 13.2 0.0077 16.3 0.7 4.6 4 0 0 4 4 4 3 Domain of unknown function, DUF529 FAINT PF04385.15 BAM39028.1 - 1.8e-11 43.9 44.1 0.00048 20.1 2.1 5.8 5 2 2 7 7 7 4 Domain of unknown function, DUF529 CpxA_peri PF16527.5 BAM39028.1 - 0.0016 18.8 0.1 2.9 8.3 0.0 2.3 2 0 0 2 2 2 2 Two-component sensor protein CpxA, periplasmic domain DUF1579 PF07617.11 BAM39028.1 - 0.0057 16.6 0.0 5.4 6.9 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF1579) Tail_spike_N PF18668.1 BAM39028.1 - 0.0097 15.7 0.1 7.8 6.4 0.0 2.7 2 0 0 2 2 2 2 Tail spike TSP1/Gp66 receptor binding N-terminal domain DUF4722 PF15849.5 BAM39028.1 - 0.049 13.4 0.0 14 5.3 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4722) Toxin_25 PF08095.11 BAM39028.1 - 0.42 10.6 7.7 38 4.4 0.2 3.6 3 0 0 3 3 3 0 Hefutoxin family tRNA-synt_1b PF00579.25 BAM39029.1 - 5.5e-25 88.3 0.0 9.5e-25 87.5 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) zf-C2HC5 PF06221.13 BAM39030.1 - 8.3e-09 35.3 4.4 1.7e-08 34.3 4.4 1.5 1 0 0 1 1 1 1 Putative zinc finger motif, C2HC5-type DUF2180 PF09947.9 BAM39030.1 - 0.089 12.8 3.8 0.21 11.6 3.8 1.6 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2180) DXP_synthase_N PF13292.6 BAM39031.1 - 4.5e-81 272.1 0.0 6.9e-80 268.2 0.0 2.2 2 0 0 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase Transket_pyr PF02779.24 BAM39031.1 - 7.9e-33 113.6 0.0 1.3e-32 112.9 0.0 1.4 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 BAM39031.1 - 4.7e-21 74.9 0.0 1.1e-20 73.7 0.0 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain Transketolase_N PF00456.21 BAM39031.1 - 0.00047 19.2 0.2 0.0041 16.1 0.0 2.1 2 0 0 2 2 2 1 Transketolase, thiamine diphosphate binding domain TPP_enzyme_C PF02775.21 BAM39031.1 - 0.042 13.7 0.0 0.15 11.9 0.0 1.9 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E1_dh PF00676.20 BAM39031.1 - 0.085 11.8 0.0 0.16 10.9 0.0 1.3 1 0 0 1 1 1 0 Dehydrogenase E1 component Rick_17kDa_Anti PF05433.15 BAM39031.1 - 0.52 10.2 7.0 1.8 8.5 7.0 2.0 1 0 0 1 1 1 0 Glycine zipper 2TM domain Peptidase_M3 PF01432.20 BAM39032.1 - 3.7e-49 168.2 12.4 5.7e-49 167.6 12.4 1.2 1 0 0 1 1 1 1 Peptidase family M3 ARL2_Bind_BART PF11527.8 BAM39032.1 - 0.48 10.5 9.3 0.035 14.2 1.3 3.2 4 1 0 4 4 4 0 The ARF-like 2 binding protein BART Ank_2 PF12796.7 BAM39033.1 - 2.1e-33 114.7 3.4 7e-14 52.2 0.2 3.9 3 1 0 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 BAM39033.1 - 4e-28 97.4 0.9 6e-09 36.3 0.0 5.8 3 2 3 6 6 6 6 Ankyrin repeats (many copies) Ank PF00023.30 BAM39033.1 - 6.1e-23 80.2 1.5 4.7e-06 26.8 0.0 7.0 7 0 0 7 7 7 4 Ankyrin repeat Ank_3 PF13606.6 BAM39033.1 - 2.4e-21 73.5 1.0 0.0015 18.8 0.0 6.8 6 0 0 6 6 6 4 Ankyrin repeat Ank_5 PF13857.6 BAM39033.1 - 5.2e-21 74.4 4.3 1.6e-06 28.3 0.1 6.5 3 2 3 6 6 6 5 Ankyrin repeats (many copies) TPR_1 PF00515.28 BAM39033.1 - 1.8e-05 24.3 0.1 0.022 14.5 0.0 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 BAM39033.1 - 0.00035 20.5 0.0 0.01 15.9 0.0 2.7 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_8 PF13181.6 BAM39033.1 - 0.00062 19.8 0.4 0.089 13.0 0.1 2.8 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 BAM39033.1 - 0.0034 17.0 0.0 0.0088 15.7 0.0 1.7 1 0 0 1 1 1 1 TPR repeat TPR_17 PF13431.6 BAM39033.1 - 0.0048 17.2 0.1 0.11 13.0 0.0 3.1 3 0 0 3 3 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 BAM39033.1 - 0.028 14.7 0.0 0.14 12.5 0.0 2.2 2 1 0 2 2 2 0 Tetratricopeptide repeat Phage_T7_Capsid PF05396.11 BAM39033.1 - 0.11 12.9 0.0 0.25 11.7 0.0 1.6 1 0 0 1 1 1 0 Phage T7 capsid assembly protein Pinin_SDK_memA PF04696.13 BAM39033.1 - 5.2 7.1 7.5 26 4.9 7.5 2.0 1 1 0 1 1 1 0 pinin/SDK/memA/ protein conserved region NPM1-C PF16276.5 BAM39034.1 - 0.16 12.0 0.0 4.3 7.4 0.0 2.5 2 0 0 2 2 2 0 Nucleophosmin C-terminal domain FAINT PF04385.15 BAM39037.1 - 0.00029 20.8 0.3 0.00029 20.8 0.3 3.1 3 0 0 3 3 3 1 Domain of unknown function, DUF529 RNA_pol_Rpb1_1 PF04997.12 BAM39037.1 - 0.064 12.6 2.9 0.13 11.6 2.9 1.4 1 0 0 1 1 1 0 RNA polymerase Rpb1, domain 1 TssO PF17561.2 BAM39038.1 - 7.3 6.7 6.5 20 5.3 1.0 2.4 2 0 0 2 2 2 0 Type VI secretion system, TssO HA2 PF04408.23 BAM39040.1 - 2.2e-23 82.6 0.0 2.2e-23 82.6 0.0 3.3 3 0 0 3 3 3 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 BAM39040.1 - 4.7e-21 74.9 0.0 1.3e-20 73.6 0.0 1.8 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Helicase_C PF00271.31 BAM39040.1 - 1.5e-10 41.4 0.0 1.2e-09 38.5 0.0 2.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain S1 PF00575.23 BAM39040.1 - 8.6e-08 32.4 0.9 2.3e-07 31.1 0.9 1.7 1 0 0 1 1 1 1 S1 RNA binding domain AAA_22 PF13401.6 BAM39040.1 - 0.00084 19.6 0.3 0.023 15.0 0.0 3.0 3 0 0 3 3 3 1 AAA domain DEAD PF00270.29 BAM39040.1 - 0.0022 17.8 4.5 0.02 14.6 3.2 2.7 2 1 0 2 2 2 1 DEAD/DEAH box helicase T2SSE PF00437.20 BAM39040.1 - 0.0075 15.4 0.0 0.015 14.3 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_19 PF13245.6 BAM39040.1 - 0.065 13.6 0.1 0.86 9.9 0.0 2.6 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 BAM39040.1 - 0.094 12.2 0.0 0.21 11.1 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region Med31 PF05669.12 BAM39040.1 - 1.1 9.3 6.2 0.78 9.8 3.3 2.3 2 0 0 2 2 2 0 SOH1 ANAPC4_WD40 PF12894.7 BAM39041.1 - 3.4e-05 24.1 0.3 0.93 9.8 0.1 3.5 2 2 2 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 BAM39041.1 - 0.00019 22.1 0.0 1.2 10.1 0.0 4.9 4 0 0 4 4 4 1 WD domain, G-beta repeat BBS2_N PF14781.6 BAM39041.1 - 0.0007 19.5 6.2 3.1 7.8 1.1 5.0 3 2 1 4 4 4 1 Ciliary BBSome complex subunit 2, N-terminal DNA_gyraseA_C PF03989.13 BAM39041.1 - 0.0038 16.7 0.1 0.017 14.6 0.0 2.1 2 0 0 2 2 2 1 DNA gyrase C-terminal domain, beta-propeller Choline_kinase PF01633.20 BAM39042.1 - 3.9e-38 131.2 0.2 7.1e-38 130.3 0.2 1.4 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 BAM39042.1 - 2e-08 34.5 0.0 3.2e-08 33.8 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family EcKinase PF02958.20 BAM39042.1 - 0.0088 15.4 3.8 0.034 13.5 3.7 2.0 1 1 0 1 1 1 1 Ecdysteroid kinase DUF4135 PF13575.6 BAM39042.1 - 0.034 13.5 0.0 0.053 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4135) Choline_kinase PF01633.20 BAM39043.1 - 1.7e-36 125.8 0.2 3e-36 125.0 0.2 1.4 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 BAM39043.1 - 4.7e-08 33.2 0.0 7.7e-08 32.5 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family EcKinase PF02958.20 BAM39043.1 - 0.00074 18.9 4.1 0.0027 17.1 4.1 2.0 1 1 0 1 1 1 1 Ecdysteroid kinase DUF4135 PF13575.6 BAM39043.1 - 0.034 13.5 0.0 0.052 12.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4135) TFIIS_C PF01096.18 BAM39045.1 - 2.3e-19 69.0 5.4 6.1e-19 67.6 5.4 1.8 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS) TFIIS_M PF07500.14 BAM39045.1 - 2.7e-19 69.7 1.3 1.4e-18 67.4 0.1 2.3 2 0 0 2 2 2 1 Transcription factor S-II (TFIIS), central domain Med26 PF08711.11 BAM39045.1 - 8.2e-07 28.9 0.9 1.7e-06 27.9 0.9 1.6 1 0 0 1 1 1 1 TFIIS helical bundle-like domain DASH_Dad2 PF08654.10 BAM39045.1 - 0.0056 17.1 1.8 0.0079 16.6 0.3 2.0 2 0 0 2 2 2 1 DASH complex subunit Dad2 zinc_ribbon_12 PF11331.8 BAM39045.1 - 1.9 8.3 5.4 4.5 7.2 0.6 2.9 3 0 0 3 3 3 0 Probable zinc-ribbon domain DUF3774 PF12609.8 BAM39045.1 - 2.1 9.4 6.5 0.23 12.5 0.9 2.3 2 1 0 2 2 2 0 Wound-induced protein UBA_3 PF09288.10 BAM39046.1 - 0.42 10.4 0.1 0.42 10.4 0.1 2.4 2 0 0 2 2 2 0 Fungal ubiquitin-associated domain EMG1 PF03587.14 BAM39048.1 - 1.4e-42 145.5 0.2 1.7e-42 145.3 0.2 1.0 1 0 0 1 1 1 1 EMG1/NEP1 methyltransferase RP-C_C PF11800.8 BAM39049.1 - 0.14 12.2 3.0 1.7 8.7 4.7 2.0 2 0 0 2 2 2 0 Replication protein C C-terminal region CobT PF06213.12 BAM39049.1 - 0.29 10.5 4.0 0.57 9.5 4.0 1.4 1 0 0 1 1 1 0 Cobalamin biosynthesis protein CobT Cnd1_N PF12922.7 BAM39049.1 - 0.45 10.4 3.6 1.2 9.0 3.6 1.8 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1, N-term Med9 PF07544.13 BAM39049.1 - 1.1 9.4 3.7 2.4 8.3 0.2 2.9 3 0 0 3 3 3 0 RNA polymerase II transcription mediator complex subunit 9 ApoLp-III PF07464.11 BAM39049.1 - 2 8.5 6.9 0.6 10.2 3.6 1.9 2 0 0 2 2 2 0 Apolipophorin-III precursor (apoLp-III) FAINT PF04385.15 BAM39051.1 - 2.7e-06 27.3 13.2 0.012 15.6 1.5 3.4 3 0 0 3 3 3 3 Domain of unknown function, DUF529 FAINT PF04385.15 BAM39053.1 - 1.1e-05 25.4 32.5 0.00026 21.0 2.6 5.9 6 0 0 6 6 6 3 Domain of unknown function, DUF529 bPH_3 PF14470.6 BAM39053.1 - 5.8 7.3 6.2 2.1 8.8 0.1 3.2 3 0 0 3 3 3 0 Bacterial PH domain ENTH PF01417.20 BAM39054.1 - 3.4e-19 69.1 0.0 5.3e-19 68.5 0.0 1.3 1 0 0 1 1 1 1 ENTH domain Ribosomal_L3 PF00297.22 BAM39056.1 - 1.2e-160 534.5 6.5 3e-80 270.0 1.6 2.0 1 1 1 2 2 2 2 Ribosomal protein L3 Hemocyanin_M PF00372.19 BAM39056.1 - 0.0055 15.9 0.0 0.0087 15.3 0.0 1.2 1 0 0 1 1 1 1 Hemocyanin, copper containing domain Cytochrom_B562 PF07361.11 BAM39056.1 - 0.099 13.3 0.1 0.33 11.6 0.0 1.8 2 0 0 2 2 2 0 Cytochrome b562 DIRP PF06584.13 BAM39056.1 - 0.21 11.8 1.6 2.4 8.4 0.3 2.4 2 0 0 2 2 2 0 DIRP FAINT PF04385.15 BAM39058.1 - 7.5e-06 25.9 8.2 5.4e-05 23.2 1.6 3.5 4 0 0 4 4 4 2 Domain of unknown function, DUF529 ECM11 PF15463.6 BAM39058.1 - 0.67 10.5 9.0 2.9 8.5 1.1 2.8 2 1 1 3 3 3 0 Extracellular mutant protein 11 EF-hand_8 PF13833.6 BAM39061.1 - 3e-05 23.8 0.2 0.36 10.7 0.0 3.7 2 2 1 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 BAM39061.1 - 5.1e-05 22.9 0.0 0.0022 17.8 0.0 2.9 3 0 0 3 3 3 1 EF-hand domain EF-hand_1 PF00036.32 BAM39061.1 - 9.9e-05 21.6 0.0 0.11 12.1 0.0 2.5 2 0 0 2 2 2 2 EF hand EF-hand_7 PF13499.6 BAM39061.1 - 0.00012 22.4 0.0 0.0079 16.6 0.0 2.9 2 1 0 2 2 2 1 EF-hand domain pair DUF3944 PF13099.6 BAM39061.1 - 0.044 13.6 0.2 0.14 12.0 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF3944) Josephin PF02099.17 BAM39062.1 - 1.3e-29 103.4 0.0 2e-29 102.8 0.0 1.2 1 0 0 1 1 1 1 Josephin Ebp2 PF05890.12 BAM39063.1 - 5.3e-21 75.4 23.6 6.5e-21 75.1 23.6 1.2 1 0 0 1 1 1 1 Eukaryotic rRNA processing protein EBP2 AT_hook PF02178.19 BAM39063.1 - 0.043 13.7 1.7 0.043 13.7 1.7 4.2 3 0 0 3 3 3 0 AT hook motif DUF2783 PF10932.8 BAM39063.1 - 0.13 12.0 0.0 0.22 11.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2783) DASH_Dam1 PF08653.10 BAM39064.1 - 0.15 11.9 1.7 1.6 8.6 0.1 2.6 2 0 0 2 2 2 0 DASH complex subunit Dam1 Methyltransf_11 PF08241.12 BAM39065.1 - 1.4e-10 41.6 0.0 2.5e-10 40.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 BAM39065.1 - 3.3e-08 34.1 0.1 1.4e-07 32.1 0.0 2.0 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_23 PF13489.6 BAM39065.1 - 0.00029 20.7 0.0 0.00048 20.0 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 BAM39065.1 - 0.00096 19.9 0.1 0.0019 18.9 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 BAM39065.1 - 0.0083 15.7 0.0 0.013 15.1 0.0 1.4 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_31 PF13847.6 BAM39065.1 - 0.0088 15.8 0.3 0.033 14.0 0.3 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 BAM39065.1 - 0.029 13.8 0.0 0.044 13.2 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_9 PF08003.11 BAM39065.1 - 0.095 11.6 0.0 0.13 11.2 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1698) DHHC PF01529.20 BAM39067.1 - 0.0053 16.9 8.3 0.0053 16.9 8.3 2.3 2 0 0 2 2 2 2 DHHC palmitoyltransferase zf-CCHC PF00098.23 BAM39068.1 - 1.2e-11 44.1 20.7 1.2e-05 25.1 0.3 4.3 4 0 0 4 4 4 4 Zinc knuckle zf-CCHC_2 PF13696.6 BAM39068.1 - 6.5e-05 22.7 16.2 0.063 13.1 0.6 3.5 3 0 0 3 3 3 3 Zinc knuckle GOLGA2L5 PF15070.6 BAM39068.1 - 0.04 12.6 0.1 0.053 12.2 0.1 1.1 1 0 0 1 1 1 0 Putative golgin subfamily A member 2-like protein 5 zf-CCHC_4 PF14392.6 BAM39068.1 - 0.13 12.1 0.2 0.13 12.1 0.2 3.7 4 0 0 4 4 4 0 Zinc knuckle Gmx_para_CXXCG PF09535.10 BAM39068.1 - 0.39 10.0 3.0 0.32 10.2 1.0 1.8 1 1 0 2 2 2 0 Protein of unknown function (Gmx_para_CXXCG) zf-CCHC_5 PF14787.6 BAM39068.1 - 1.4 8.7 14.5 2.8 7.7 0.7 3.5 3 0 0 3 3 3 0 GAG-polyprotein viral zinc-finger DUF1163 PF06651.11 BAM39068.1 - 6.3 7.0 11.9 0.096 12.8 3.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1163) zf-CCHC_3 PF13917.6 BAM39068.1 - 8 6.5 17.6 1.3 9.1 1.0 3.4 2 1 1 3 3 3 0 Zinc knuckle zf-CCCH PF00642.24 BAM39069.1 - 0.011 15.6 0.9 0.011 15.6 0.9 3.7 3 1 0 3 3 3 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_4 PF18044.1 BAM39069.1 - 0.16 11.8 3.6 0.66 9.8 3.6 2.2 1 1 0 1 1 1 0 CCCH-type zinc finger zf-CCCH_2 PF14608.6 BAM39069.1 - 9.3 6.9 21.8 0.16 12.5 4.6 3.0 3 0 0 3 3 3 0 RNA-binding, Nab2-type zinc finger RRM_1 PF00076.22 BAM39072.1 - 2e-14 53.1 0.0 4.6e-14 52.0 0.0 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) TSP_1 PF00090.19 BAM39072.1 - 7.6 6.8 11.1 12 6.2 1.5 3.9 4 0 0 4 4 4 0 Thrombospondin type 1 domain HR1 PF02185.16 BAM39073.1 - 0.062 13.4 0.7 0.082 13.0 0.7 1.2 1 0 0 1 1 1 0 Hr1 repeat RAP PF08373.10 BAM39074.1 - 4.3e-17 61.9 0.9 1.2e-16 60.5 0.9 1.9 1 0 0 1 1 1 1 RAP domain MTES_1575 PF18741.1 BAM39074.1 - 0.0004 20.5 0.2 0.0004 20.5 0.2 2.3 2 0 0 2 2 2 1 REase_MTES_1575 AAA_lid_7 PF17867.1 BAM39074.1 - 0.005 17.0 0.0 0.013 15.7 0.0 1.8 1 0 0 1 1 1 1 Midasin AAA lid domain Proteasome PF00227.26 BAM39075.1 - 5.1e-52 176.1 0.1 6.8e-52 175.7 0.1 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 BAM39075.1 - 2.1e-12 46.5 0.0 4e-12 45.6 0.0 1.5 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature Adenyl_transf PF04439.12 BAM39077.1 - 0.0016 17.6 2.1 0.062 12.4 0.3 2.6 2 0 0 2 2 2 2 Streptomycin adenylyltransferase Ribosomal_L33 PF00471.20 BAM39079.1 - 9.6e-06 25.9 0.1 1.9e-05 25.0 0.1 1.5 1 0 0 1 1 1 1 Ribosomal protein L33 Sad1_UNC PF07738.13 BAM39080.1 - 4.5e-15 55.8 1.1 9.8e-15 54.7 1.1 1.6 1 0 0 1 1 1 1 Sad1 / UNC-like C-terminal FAINT PF04385.15 BAM39081.1 - 3.6e-18 65.4 86.5 1.8e-06 27.9 3.7 13.5 12 1 1 13 13 13 9 Domain of unknown function, DUF529 MazE_antitoxin PF04014.18 BAM39081.1 - 0.0022 17.9 4.3 15 5.7 0.1 3.8 3 0 0 3 3 3 3 Antidote-toxin recognition MazE, bacterial antitoxin RFX_DNA_binding PF02257.15 BAM39081.1 - 0.11 13.2 0.1 0.36 11.5 0.0 1.8 2 0 0 2 2 2 0 RFX DNA-binding domain DUF5614 PF18474.1 BAM39081.1 - 0.12 11.7 0.2 83 2.4 0.0 3.7 4 0 0 4 4 4 0 Family of unknown function (DUF5614) Sialidase PF02973.16 BAM39081.1 - 1.6 8.2 10.2 10 5.6 0.0 3.9 4 0 0 4 4 4 0 Sialidase, N-terminal domain FAINT PF04385.15 BAM39082.1 - 1e-06 28.7 0.2 0.00051 20.1 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function, DUF529 LSR PF05624.14 BAM39082.1 - 8 6.5 7.0 17 5.5 7.0 1.5 1 0 0 1 1 1 0 Lipolysis stimulated receptor (LSR) RNase_P_pop3 PF08228.11 BAM39083.1 - 1.3e-06 28.6 0.0 1.5e-06 28.4 0.0 1.1 1 0 0 1 1 1 1 RNase P subunit Pop3 Ribosomal_L7Ae PF01248.26 BAM39083.1 - 2.7e-05 23.8 0.0 3.6e-05 23.4 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SpoU_sub_bind PF08032.12 BAM39083.1 - 0.0012 19.0 0.0 0.002 18.4 0.0 1.3 1 0 0 1 1 1 1 RNA 2'-O ribose methyltransferase substrate binding DUF2400 PF09674.10 BAM39084.1 - 0.027 14.5 0.0 0.14 12.1 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2400) FAINT PF04385.15 BAM39085.1 - 3.2e-31 107.2 65.0 0.00011 22.2 1.8 11.0 10 1 0 10 10 10 10 Domain of unknown function, DUF529 FAINT PF04385.15 BAM39087.1 - 0.00012 22.1 4.5 0.00012 22.1 4.5 2.6 1 1 1 2 2 2 1 Domain of unknown function, DUF529 Amnionless PF14828.6 BAM39087.1 - 0.046 12.6 0.7 3.5 6.3 0.2 2.2 2 1 0 2 2 2 0 Amnionless Sugar_tr PF00083.24 BAM39088.1 - 3.7e-71 240.3 23.5 3.7e-71 240.3 23.5 1.6 1 1 1 2 2 2 1 Sugar (and other) transporter MFS_1 PF07690.16 BAM39088.1 - 2.3e-20 72.8 50.4 7.6e-20 71.1 25.2 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily RRM_5 PF13893.6 BAM39088.1 - 0.06 13.0 0.1 14 5.3 0.0 2.5 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF4079 PF13301.6 BAM39088.1 - 0.8 9.9 8.1 15 5.8 3.0 3.5 2 2 0 2 2 2 0 Protein of unknown function (DUF4079) Pkinase PF00069.25 BAM39089.1 - 4.5e-31 108.2 0.2 1.1e-16 61.0 0.0 2.2 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 BAM39089.1 - 3.9e-11 42.7 0.0 1.9e-06 27.4 0.0 2.2 2 0 0 2 2 2 2 Protein tyrosine kinase Kinase-like PF14531.6 BAM39089.1 - 3.2e-06 26.7 0.0 0.0023 17.3 0.0 2.5 2 1 1 3 3 3 2 Kinase-like Kdo PF06293.14 BAM39089.1 - 0.0086 15.5 0.0 0.016 14.5 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 BAM39089.1 - 0.033 13.0 0.0 0.039 12.7 0.0 1.2 1 0 0 1 1 1 0 Fungal protein kinase APH PF01636.23 BAM39089.1 - 0.22 11.4 0.0 0.47 10.3 0.0 1.5 1 0 0 1 1 1 0 Phosphotransferase enzyme family CBFD_NFYB_HMF PF00808.23 BAM39091.1 - 6.5e-17 61.6 1.7 8.7e-17 61.2 0.3 2.0 2 0 0 2 2 2 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 BAM39091.1 - 4.6e-16 59.4 0.2 4.6e-16 59.4 0.2 1.5 2 0 0 2 2 2 1 Core histone H2A/H2B/H3/H4 TAF PF02969.17 BAM39091.1 - 0.0066 16.6 0.1 0.019 15.1 0.1 1.8 1 1 0 1 1 1 1 TATA box binding protein associated factor (TAF) Sec63 PF02889.16 BAM39092.1 - 4e-67 226.1 8.0 2.4e-34 118.7 0.1 2.8 3 0 0 3 3 3 2 Sec63 Brl domain DEAD PF00270.29 BAM39092.1 - 2.4e-46 157.7 0.3 8.4e-25 87.5 0.0 3.0 3 0 0 3 3 3 2 DEAD/DEAH box helicase ResIII PF04851.15 BAM39092.1 - 6e-25 88.2 0.0 6.5e-12 45.8 0.0 2.6 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit Helicase_C PF00271.31 BAM39092.1 - 3.8e-22 78.7 0.1 5.2e-10 39.6 0.0 3.9 2 2 0 2 2 2 2 Helicase conserved C-terminal domain AAA_16 PF13191.6 BAM39092.1 - 1e-05 26.0 0.0 0.0012 19.3 0.0 2.6 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 BAM39092.1 - 4.3e-05 23.8 0.1 0.56 10.5 0.0 3.5 2 2 0 2 2 2 2 AAA domain T2SSE PF00437.20 BAM39092.1 - 0.00091 18.4 0.0 0.9 8.5 0.0 2.5 2 0 0 2 2 2 2 Type II/IV secretion system protein DUF2075 PF09848.9 BAM39092.1 - 0.017 14.3 0.0 0.33 10.2 0.0 2.4 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) PhoH PF02562.16 BAM39092.1 - 0.098 12.1 0.0 7.4 6.0 0.0 2.6 2 0 0 2 2 2 0 PhoH-like protein AAA_25 PF13481.6 BAM39092.1 - 0.19 11.3 0.0 19 4.7 0.0 2.4 2 0 0 2 2 2 0 AAA domain FAINT PF04385.15 BAM39093.1 - 1.9e-05 24.6 27.1 2.4 8.3 0.0 7.5 7 1 0 7 7 7 6 Domain of unknown function, DUF529 Creb_binding PF09030.10 BAM39094.1 - 0.04 14.6 0.4 0.086 13.5 0.4 1.6 1 1 0 1 1 1 0 Creb binding RRM_1 PF00076.22 BAM39097.1 - 6.5e-08 32.3 0.0 0.0011 18.7 0.0 2.8 2 1 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Hexapep PF00132.24 BAM39098.1 - 0.038 13.7 0.1 0.25 11.1 0.1 2.0 1 1 1 2 2 2 0 Bacterial transferase hexapeptide (six repeats) DUF4954 PF16314.5 BAM39098.1 - 0.12 10.5 0.0 0.12 10.5 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) NTP_transferase PF00483.23 BAM39099.1 - 9.1e-12 45.1 0.0 1.3e-11 44.5 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 BAM39099.1 - 1.7e-09 38.2 0.0 2.5e-09 37.7 0.0 1.4 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 BAM39099.1 - 0.00052 20.0 0.0 0.00081 19.4 0.0 1.3 1 0 0 1 1 1 1 Cytidylyltransferase STAG PF08514.11 BAM39101.1 - 0.22 11.4 1.5 0.37 10.7 0.1 2.2 2 0 0 2 2 2 0 STAG domain FAST_1 PF06743.15 BAM39101.1 - 0.91 9.5 5.1 11 6.0 0.1 3.8 4 0 0 4 4 4 0 FAST kinase-like protein, subdomain 1 Glyco_transf_20 PF00982.21 BAM39102.1 - 8.8e-96 321.4 0.2 2.7e-95 319.8 0.3 1.7 2 0 0 2 2 2 1 Glycosyltransferase family 20 Trehalose_PPase PF02358.16 BAM39102.1 - 7.3e-35 120.2 0.0 1.7e-34 119.0 0.0 1.6 1 0 0 1 1 1 1 Trehalose-phosphatase CBM_20 PF00686.19 BAM39102.1 - 7.5e-13 48.2 0.1 2.4e-12 46.6 0.1 1.8 2 0 0 2 2 2 1 Starch binding domain Hydrolase_3 PF08282.12 BAM39102.1 - 0.14 11.8 0.0 2.3 7.9 0.0 2.7 3 0 0 3 3 3 0 haloacid dehalogenase-like hydrolase DUF2764 PF10962.8 BAM39103.1 - 0.016 14.7 0.2 0.017 14.7 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF2764) Plasmid_parti PF01672.16 BAM39103.1 - 0.02 15.5 0.3 0.025 15.2 0.3 1.3 1 0 0 1 1 1 0 Putative plasmid partition protein ISP3_C PF18045.1 BAM39103.1 - 0.038 13.9 0.0 0.045 13.6 0.0 1.1 1 0 0 1 1 1 0 ISP3 C-terminal eIF-1a PF01176.19 BAM39104.1 - 1.3e-07 31.3 0.1 1.9e-07 30.8 0.1 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 DUF3546 PF12066.8 BAM39105.1 - 1.8e-11 44.2 3.5 1.8e-11 44.2 3.5 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF3546) ARS2 PF04959.13 BAM39105.1 - 0.00019 21.9 2.2 0.00033 21.1 2.2 1.5 1 1 0 1 1 1 1 Arsenite-resistance protein 2 DUF4187 PF13821.6 BAM39105.1 - 0.0015 18.2 0.2 0.0063 16.3 0.1 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4187) zf-C2H2 PF00096.26 BAM39105.1 - 0.052 14.0 1.5 0.13 12.7 1.5 1.8 1 0 0 1 1 1 0 Zinc finger, C2H2 type Zf_RING PF16744.5 BAM39105.1 - 0.084 13.0 0.3 0.15 12.1 0.3 1.4 1 0 0 1 1 1 0 KIAA1045 RING finger zf-C2H2_4 PF13894.6 BAM39105.1 - 0.13 13.1 2.0 0.39 11.7 2.0 1.9 1 0 0 1 1 1 0 C2H2-type zinc finger COG4 PF08318.12 BAM39106.1 - 9.8e-19 67.6 1.8 1.3e-18 67.2 0.3 2.0 2 0 0 2 2 2 1 COG4 transport protein DUF2226 PF09987.9 BAM39106.1 - 0.053 12.9 0.0 5.3 6.3 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2226) Tmemb_cc2 PF10267.9 BAM39106.1 - 2.3 7.2 15.2 1.5 7.9 7.6 2.2 2 0 0 2 2 2 0 Predicted transmembrane and coiled-coil 2 protein ThiF PF00899.21 BAM39107.1 - 1.1e-33 116.7 0.1 1.9e-16 60.2 0.0 2.2 2 0 0 2 2 2 2 ThiF family E2_bind PF08825.10 BAM39107.1 - 0.00035 20.7 0.0 0.00067 19.8 0.0 1.5 1 0 0 1 1 1 1 E2 binding domain DUF3454 PF11936.8 BAM39108.1 - 0.043 14.2 1.6 0.043 14.2 1.6 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF3454) FAINT PF04385.15 BAM39109.1 - 6.2e-09 35.8 18.9 0.00025 21.0 0.0 5.2 5 0 0 5 5 5 3 Domain of unknown function, DUF529 WD40 PF00400.32 BAM39111.1 - 0.0023 18.7 0.0 0.017 16.0 0.0 2.5 2 0 0 2 2 2 1 WD domain, G-beta repeat Arc_C PF18162.1 BAM39112.1 - 0.07 13.0 0.0 0.084 12.7 0.0 1.3 1 0 0 1 1 1 0 Arc C-lobe PPR_2 PF13041.6 BAM39113.1 - 4.7e-05 23.5 0.1 0.00017 21.7 0.0 2.1 2 0 0 2 2 2 1 PPR repeat family PPR_3 PF13812.6 BAM39113.1 - 0.007 16.4 0.0 0.013 15.5 0.0 1.5 1 0 0 1 1 1 1 Pentatricopeptide repeat domain PPR PF01535.20 BAM39113.1 - 0.094 13.0 0.9 0.094 13.0 0.9 2.4 2 1 0 2 2 2 0 PPR repeat MIF4G PF02854.19 BAM39114.1 - 4e-19 69.1 4.5 2.3e-11 43.7 3.4 2.5 2 0 0 2 2 2 2 MIF4G domain TBP PF00352.21 BAM39115.1 - 1.6e-55 185.0 1.4 3.3e-28 97.5 0.1 2.2 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) Lactamase_B_6 PF16661.5 BAM39116.1 - 0.012 15.0 0.0 0.64 9.4 0.0 2.5 2 0 0 2 2 2 0 Metallo-beta-lactamase superfamily domain Beta_lactamase3 PF17030.5 BAM39116.1 - 0.017 14.4 0.0 0.08 12.2 0.0 2.0 2 0 0 2 2 2 0 Putative beta-lactamase-like family FAINT PF04385.15 BAM39117.1 - 3.7e-06 26.9 2.1 9.4e-06 25.6 2.1 1.6 1 0 0 1 1 1 1 Domain of unknown function, DUF529 Pinin_SDK_N PF04697.13 BAM39117.1 - 0.5 11.0 0.0 0.5 11.0 0.0 2.9 3 0 0 3 3 3 0 pinin/SDK conserved region HTH_39 PF14090.6 BAM39118.1 - 0.13 12.0 0.0 0.19 11.5 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain zf-C2H2_4 PF13894.6 BAM39119.1 - 2.4e-07 31.0 4.0 0.0034 18.1 0.2 2.6 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2 PF00096.26 BAM39119.1 - 3.9e-05 23.9 3.8 0.019 15.4 0.2 2.8 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_jaz PF12171.8 BAM39119.1 - 8.4e-05 22.8 6.0 0.011 16.0 0.5 2.6 2 0 0 2 2 2 2 Zinc-finger double-stranded RNA-binding zf-C2HC_2 PF13913.6 BAM39119.1 - 0.00064 19.5 0.2 0.00064 19.5 0.2 1.9 2 0 0 2 2 2 1 zinc-finger of a C2HC-type Spc42p PF11544.8 BAM39119.1 - 0.017 15.1 0.2 0.092 12.8 0.0 2.2 2 0 0 2 2 2 0 Spindle pole body component Spc42p LIM PF00412.22 BAM39119.1 - 0.098 12.9 2.1 0.24 11.6 2.1 1.7 1 1 0 1 1 1 0 LIM domain Vir_act_alpha_C PF10400.9 BAM39119.1 - 0.11 13.2 0.1 0.31 11.7 0.1 1.7 1 0 0 1 1 1 0 Virulence activator alpha C-term zf-C2H2_6 PF13912.6 BAM39119.1 - 0.12 12.5 8.4 0.1 12.6 0.9 3.1 2 1 1 3 3 3 0 C2H2-type zinc finger DUF2389 PF09493.10 BAM39119.1 - 0.17 12.5 1.1 1.1 10.0 0.2 2.2 2 0 0 2 2 2 0 Tryptophan-rich protein (DUF2389) Rad50_zn_hook PF04423.14 BAM39119.1 - 0.3 11.0 0.2 0.3 11.0 0.2 2.2 2 1 1 3 3 3 0 Rad50 zinc hook motif Ima1_N PF09779.9 BAM39119.1 - 0.53 11.1 4.9 0.2 12.5 1.6 2.0 2 0 0 2 2 2 0 Ima1 N-terminal domain zf-C2H2_2 PF12756.7 BAM39119.1 - 4.3 7.7 11.4 3.3 8.1 0.3 2.9 3 1 1 4 4 3 0 C2H2 type zinc-finger (2 copies) zf-C2H2_11 PF16622.5 BAM39119.1 - 6.1 6.7 6.5 0.87 9.4 0.8 2.4 3 0 0 3 3 3 0 zinc-finger C2H2-type ADK PF00406.22 BAM39120.1 - 4.1e-54 182.8 0.0 5.3e-54 182.4 0.0 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 BAM39120.1 - 5.7e-20 72.1 0.0 1.4e-19 70.9 0.0 1.7 2 0 0 2 2 2 1 AAA domain ADK_lid PF05191.14 BAM39120.1 - 1.5e-14 53.6 0.0 2.8e-14 52.8 0.0 1.5 1 0 0 1 1 1 1 Adenylate kinase, active site lid AAA_33 PF13671.6 BAM39120.1 - 0.00053 20.2 0.0 0.0011 19.2 0.0 1.5 1 1 0 1 1 1 1 AAA domain Hydin_ADK PF17213.3 BAM39120.1 - 0.00062 20.1 0.0 0.78 10.0 0.0 2.3 1 1 1 2 2 2 2 Hydin Adenylate kinase-like domain DAP3 PF10236.9 BAM39120.1 - 0.012 14.8 0.2 1.2 8.3 0.2 2.1 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 AAA_18 PF13238.6 BAM39120.1 - 0.13 12.8 0.5 1.8 9.1 0.0 2.4 3 0 0 3 3 3 0 AAA domain Thymidylate_kin PF02223.17 BAM39120.1 - 0.18 11.5 1.3 8.3 6.0 0.0 2.7 3 0 0 3 3 3 0 Thymidylate kinase TP_methylase PF00590.20 BAM39121.1 - 4.8e-18 65.9 0.0 1e-17 64.8 0.0 1.6 1 1 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases UPF0020 PF01170.18 BAM39122.1 - 6.6e-10 39.0 0.1 7.2e-05 22.6 0.0 2.8 2 1 0 2 2 2 2 Putative RNA methylase family UPF0020 N6_N4_Mtase PF01555.18 BAM39122.1 - 0.00073 19.3 1.2 0.65 9.7 0.0 2.9 2 1 0 2 2 2 2 DNA methylase N6_Mtase PF02384.16 BAM39122.1 - 0.0082 15.4 0.0 0.03 13.6 0.0 1.8 1 1 0 1 1 1 1 N-6 DNA Methylase THUMP PF02926.17 BAM39122.1 - 0.015 15.4 0.9 0.03 14.4 0.9 1.5 1 0 0 1 1 1 0 THUMP domain N6-adenineMlase PF10237.9 BAM39122.1 - 0.02 14.7 0.0 0.041 13.7 0.0 1.5 1 0 0 1 1 1 0 Probable N6-adenine methyltransferase AviRa PF11599.8 BAM39122.1 - 0.18 11.2 0.0 0.72 9.3 0.0 1.9 2 0 0 2 2 2 0 RRNA methyltransferase AviRa DUF1764 PF08576.10 BAM39123.1 - 5.4e-23 81.8 4.3 5.4e-23 81.8 4.3 1.7 1 1 1 2 2 2 1 Eukaryotic protein of unknown function (DUF1764) Arabino_trans_C PF14896.6 BAM39123.1 - 0.64 9.0 2.4 0.74 8.7 2.4 1.1 1 0 0 1 1 1 0 EmbC C-terminal domain EFP_N PF08207.12 BAM39124.1 - 2.7e-09 36.9 0.0 4.4e-09 36.2 0.0 1.4 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain EFP PF01132.20 BAM39124.1 - 0.014 15.4 0.2 0.034 14.2 0.4 1.6 2 0 0 2 2 2 0 Elongation factor P (EF-P) OB domain Ras PF00071.22 BAM39125.1 - 7.3e-35 120.0 0.1 1.6e-34 118.9 0.1 1.5 1 1 0 1 1 1 1 Ras family Roc PF08477.13 BAM39125.1 - 8e-29 100.3 0.0 1.5e-28 99.4 0.0 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 BAM39125.1 - 1.8e-08 34.1 0.1 6.6e-08 32.2 0.1 1.7 1 1 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 BAM39125.1 - 0.00061 19.9 0.0 0.0013 18.7 0.0 1.5 2 0 0 2 2 2 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 BAM39125.1 - 0.14 11.5 0.0 0.22 10.8 0.0 1.4 1 1 0 1 1 1 0 Gtr1/RagA G protein conserved region HA2 PF04408.23 BAM39126.1 - 7.6e-20 71.2 1.4 3.2e-19 69.2 0.0 2.6 2 0 0 2 2 2 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 BAM39126.1 - 2.2e-17 63.2 0.2 4.8e-17 62.1 0.2 1.6 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Helicase_C PF00271.31 BAM39126.1 - 1e-13 51.6 0.0 4.2e-13 49.6 0.0 2.1 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 BAM39126.1 - 1.5e-05 24.8 1.4 4.4e-05 23.3 0.0 2.3 3 0 0 3 3 3 1 DEAD/DEAH box helicase AAA_22 PF13401.6 BAM39126.1 - 2.2e-05 24.7 0.5 0.00018 21.8 0.0 2.7 3 0 0 3 3 3 1 AAA domain T2SSE PF00437.20 BAM39126.1 - 0.00029 20.0 0.0 0.00057 19.0 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_7 PF12775.7 BAM39126.1 - 0.0018 17.8 0.2 0.0073 15.8 0.1 1.9 1 1 1 2 2 2 1 P-loop containing dynein motor region AAA_19 PF13245.6 BAM39126.1 - 0.0047 17.3 0.0 0.01 16.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 BAM39126.1 - 0.011 15.5 0.0 0.019 14.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 BAM39126.1 - 0.097 12.1 0.1 0.47 9.9 0.0 2.1 3 0 0 3 3 3 0 PhoH-like protein AAA_33 PF13671.6 BAM39126.1 - 0.11 12.7 0.0 0.3 11.3 0.0 1.9 1 0 0 1 1 1 0 AAA domain DIM1 PF02966.16 BAM39127.1 - 2.9e-66 221.3 0.3 3.2e-66 221.1 0.3 1.0 1 0 0 1 1 1 1 Mitosis protein DIM1 Thioredoxin PF00085.20 BAM39127.1 - 0.0056 16.7 0.0 0.0074 16.3 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin FAM76 PF16046.5 BAM39128.1 - 1e-21 77.6 37.5 1.6e-21 76.9 37.5 1.4 1 1 0 1 1 1 1 FAM76 protein TSC22 PF01166.18 BAM39128.1 - 0.0093 16.3 2.8 0.018 15.3 2.8 1.5 1 0 0 1 1 1 1 TSC-22/dip/bun family DUF4164 PF13747.6 BAM39129.1 - 0.00095 19.4 3.3 0.83 10.0 1.7 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF4164) APG6_N PF17675.1 BAM39129.1 - 0.0019 18.7 2.4 0.18 12.3 1.9 2.1 2 0 0 2 2 2 1 Apg6 coiled-coil region ALIX_LYPXL_bnd PF13949.6 BAM39129.1 - 0.0059 15.9 1.1 0.009 15.3 1.1 1.2 1 0 0 1 1 1 1 ALIX V-shaped domain binding to HIV Lzipper-MIP1 PF14389.6 BAM39129.1 - 0.014 15.6 1.6 0.5 10.7 0.3 2.3 2 0 0 2 2 2 0 Leucine-zipper of ternary complex factor MIP1 Spc24 PF08286.11 BAM39129.1 - 0.04 14.2 0.0 0.68 10.2 0.0 2.3 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 Zip PF02535.22 BAM39129.1 - 0.057 12.6 0.2 0.096 11.9 0.2 1.3 1 0 0 1 1 1 0 ZIP Zinc transporter TPD52 PF04201.15 BAM39129.1 - 0.062 12.9 5.4 0.046 13.3 3.5 1.7 1 1 1 2 2 2 0 Tumour protein D52 family SOGA PF11365.8 BAM39129.1 - 0.081 14.1 4.8 0.47 11.6 4.4 2.0 1 1 1 2 2 2 0 Protein SOGA MCU PF04678.13 BAM39129.1 - 0.087 12.9 1.2 0.12 12.4 0.7 1.5 1 1 0 1 1 1 0 Mitochondrial calcium uniporter KELK PF15796.5 BAM39129.1 - 0.11 13.0 5.9 4.1 7.9 2.6 2.2 2 0 0 2 2 2 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase TMF_DNA_bd PF12329.8 BAM39129.1 - 0.76 9.8 11.5 4.9 7.2 6.6 2.2 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding CDC50 PF03381.15 BAM39132.1 - 1.5e-24 87.0 1.1 5.5e-24 85.1 1.1 1.9 1 1 0 1 1 1 1 LEM3 (ligand-effect modulator 3) family / CDC50 family DUF4636 PF15468.6 BAM39132.1 - 0.078 12.7 0.2 0.47 10.1 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4636) FAM72 PF14976.6 BAM39132.1 - 0.12 12.5 0.1 2 8.6 0.0 2.3 2 0 0 2 2 2 0 FAM72 protein AMA-1 PF02430.15 BAM39133.1 - 3e-163 544.1 18.4 4.6e-163 543.5 16.7 2.1 2 1 0 2 2 2 1 Apical membrane antigen 1 CD34_antigen PF06365.12 BAM39133.1 - 0.00047 19.8 1.2 0.096 12.3 0.0 3.0 3 0 0 3 3 3 2 CD34/Podocalyxin family DUF2207 PF09972.9 BAM39133.1 - 0.0076 15.1 0.0 1.3 7.6 0.0 2.3 2 0 0 2 2 2 2 Predicted membrane protein (DUF2207) LRR19-TM PF15176.6 BAM39133.1 - 0.026 14.5 0.3 0.7 9.9 0.0 2.8 2 0 0 2 2 2 0 Leucine-rich repeat family 19 TM domain DUF4366 PF14283.6 BAM39133.1 - 0.11 12.6 7.0 1.6 8.7 0.0 3.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4366) Holin_2-3 PF13272.6 BAM39133.1 - 0.11 12.8 0.1 0.42 10.9 0.0 2.0 2 0 0 2 2 2 0 Putative 2/3 transmembrane domain holin DUF3514 PF12027.8 BAM39133.1 - 0.11 12.1 0.4 0.52 10.0 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3514) Potass_KdpF PF09604.10 BAM39133.1 - 2.1 8.4 3.9 4.7 7.3 3.9 1.6 1 0 0 1 1 1 0 F subunit of K+-transporting ATPase (Potass_KdpF) FAINT PF04385.15 BAM39134.1 - 3.4e-08 33.4 1.5 7.1e-08 32.4 1.5 1.6 1 0 0 1 1 1 1 Domain of unknown function, DUF529 EloA-BP1 PF15870.5 BAM39136.1 - 0.076 13.3 0.4 0.12 12.6 0.4 1.3 1 0 0 1 1 1 0 ElonginA binding-protein 1 RNA_pol_Rpc34 PF05158.12 BAM39138.1 - 2.9e-27 95.9 6.5 2e-22 80.0 0.0 2.8 1 1 1 2 2 2 2 RNA polymerase Rpc34 subunit NDUF_B8 PF05821.11 BAM39139.1 - 0.095 12.6 0.3 0.095 12.6 0.3 1.9 1 1 0 2 2 2 0 NADH-ubiquinone oxidoreductase ASHI subunit (CI-ASHI or NDUFB8) DUF5090 PF17009.5 BAM39139.1 - 0.52 10.3 16.7 0.1 12.5 13.3 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF5090) Herpes_LMP1 PF05297.11 BAM39139.1 - 1.4 8.1 5.1 2.4 7.3 5.1 1.3 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) Ycf70 PF17382.2 BAM39139.1 - 2.2 8.7 5.6 1.3 9.5 3.1 2.0 1 1 0 1 1 1 0 Uncharacterized Ycf70-like Ribosomal_S25 PF03297.15 BAM39140.1 - 1.6e-37 127.8 3.8 1.8e-37 127.6 3.8 1.0 1 0 0 1 1 1 1 S25 ribosomal protein HTH_24 PF13412.6 BAM39140.1 - 0.064 12.8 0.5 0.087 12.4 0.5 1.3 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.19 BAM39140.1 - 0.11 12.8 0.1 0.17 12.1 0.1 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain DDRGK PF09756.9 BAM39140.1 - 0.15 11.6 1.9 0.24 11.0 1.9 1.3 1 1 0 1 1 1 0 DDRGK domain CagY_I PF14585.6 BAM39141.1 - 0.017 15.2 0.1 0.04 14.0 0.1 1.6 1 0 0 1 1 1 0 CagY type 1 repeat zf-RING_2 PF13639.6 BAM39142.1 - 2.9e-09 37.1 6.9 6.1e-09 36.1 6.9 1.6 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 BAM39142.1 - 4e-08 33.0 5.9 7.8e-08 32.0 5.9 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 BAM39142.1 - 1.6e-07 31.0 5.1 3.3e-07 30.1 5.1 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 BAM39142.1 - 1.9e-07 31.3 8.1 6.6e-07 29.5 8.1 1.9 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 BAM39142.1 - 5.6e-06 26.1 2.5 1e-05 25.2 2.5 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 BAM39142.1 - 0.00013 21.9 2.6 0.00026 20.9 2.6 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-ANAPC11 PF12861.7 BAM39142.1 - 0.0061 16.6 1.6 0.014 15.4 1.6 1.6 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_11 PF17123.5 BAM39142.1 - 0.014 15.2 1.8 0.014 15.2 1.8 2.0 2 0 0 2 2 2 0 RING-like zinc finger Prok-RING_4 PF14447.6 BAM39142.1 - 0.014 15.3 5.5 0.028 14.3 5.5 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 BAM39142.1 - 0.032 14.4 3.9 0.068 13.3 3.9 1.6 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_5 PF14634.6 BAM39142.1 - 0.034 14.1 5.2 0.07 13.1 5.2 1.6 1 0 0 1 1 1 0 zinc-RING finger domain Zn_ribbon_17 PF17120.5 BAM39142.1 - 0.11 12.1 4.4 0.22 11.1 4.4 1.4 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING_4 PF14570.6 BAM39142.1 - 0.15 11.8 4.4 0.3 10.9 4.4 1.4 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-RING_6 PF14835.6 BAM39142.1 - 0.32 10.9 1.5 1.7 8.6 2.3 1.8 2 0 0 2 2 1 0 zf-RING of BARD1-type protein zf-RING-like PF08746.11 BAM39142.1 - 4.3 7.7 5.4 12 6.3 5.4 1.8 1 0 0 1 1 1 0 RING-like domain FAS_N PF17828.1 BAM39143.1 - 0.47 10.5 3.7 0.21 11.6 0.4 2.0 2 0 0 2 2 2 0 N-terminal domain in fatty acid synthase subunit beta Nrap_D4 PF17405.2 BAM39144.1 - 7.6e-11 41.8 0.0 1.9e-10 40.5 0.0 1.6 1 0 0 1 1 1 1 Nrap protein nucleotidyltransferase domain 4 Nrap_D2 PF17403.2 BAM39144.1 - 0.0015 18.3 0.1 0.0086 15.9 0.0 2.4 3 0 0 3 3 3 1 Nrap protein PAP/OAS-like domain Dfp1_Him1_M PF08630.10 BAM39144.1 - 0.25 11.6 2.7 1 9.6 2.7 2.1 1 0 0 1 1 1 0 Dfp1/Him1, central region adh_short PF00106.25 BAM39146.1 - 6.3e-28 97.6 0.0 2.2e-20 72.9 0.0 2.1 1 1 1 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 BAM39146.1 - 2.7e-15 56.6 0.0 2e-13 50.4 0.0 2.1 1 1 1 2 2 2 2 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 BAM39146.1 - 0.00043 20.2 0.0 0.0026 17.7 0.0 2.2 1 1 0 1 1 1 1 KR domain DUF1776 PF08643.10 BAM39146.1 - 0.034 13.5 0.0 0.051 12.9 0.0 1.3 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) YSIRK_signal PF04650.17 BAM39147.1 - 4e-05 23.4 1.9 6.8e-05 22.6 1.9 1.4 1 0 0 1 1 1 1 YSIRK type signal peptide Dynamin_N PF00350.23 BAM39148.1 - 3e-12 46.9 0.5 9.6e-12 45.3 0.1 2.1 2 0 0 2 2 2 1 Dynamin family MMR_HSR1 PF01926.23 BAM39148.1 - 0.0017 18.4 0.0 0.0054 16.8 0.0 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase DUF1664 PF07889.12 BAM39148.1 - 0.41 10.7 2.7 0.51 10.4 0.3 2.4 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) ABC_tran PF00005.27 BAM39150.1 - 3.9e-33 114.9 0.0 2.6e-17 63.6 0.0 2.4 2 0 0 2 2 2 2 ABC transporter RsgA_GTPase PF03193.16 BAM39150.1 - 1.4e-05 25.0 1.6 0.021 14.7 0.3 2.5 2 0 0 2 2 2 2 RsgA GTPase Zeta_toxin PF06414.12 BAM39150.1 - 1.7e-05 24.2 0.3 0.073 12.3 0.1 2.4 2 0 0 2 2 2 2 Zeta toxin AAA_29 PF13555.6 BAM39150.1 - 9.2e-05 22.1 0.6 0.3 10.9 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_30 PF13604.6 BAM39150.1 - 0.00093 19.0 0.5 0.12 12.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain MeaB PF03308.16 BAM39150.1 - 0.001 18.2 0.3 0.41 9.6 0.2 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 BAM39150.1 - 0.0015 19.0 0.1 1.3 9.4 0.0 2.3 2 0 0 2 2 2 1 AAA ATPase domain AAA_21 PF13304.6 BAM39150.1 - 0.0054 16.6 0.3 1.5 8.5 0.1 2.9 3 0 0 3 3 3 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 BAM39150.1 - 0.0056 17.2 1.9 0.63 10.5 0.0 3.1 3 0 0 3 3 3 1 AAA domain T2SSE PF00437.20 BAM39150.1 - 0.0073 15.4 0.6 1.6 7.7 0.1 2.2 2 0 0 2 2 2 1 Type II/IV secretion system protein DUF87 PF01935.17 BAM39150.1 - 0.012 15.7 3.5 1.9 8.5 0.2 2.8 2 0 0 2 2 2 0 Helicase HerA, central domain FtsK_SpoIIIE PF01580.18 BAM39150.1 - 0.015 14.6 0.2 0.55 9.5 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family MMR_HSR1 PF01926.23 BAM39150.1 - 0.022 14.9 0.6 1.4 9.1 0.1 2.9 2 0 0 2 2 2 0 50S ribosome-binding GTPase ATP_bind_1 PF03029.17 BAM39150.1 - 0.022 14.5 1.0 3.4 7.4 0.2 2.5 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_18 PF13238.6 BAM39150.1 - 0.035 14.7 0.1 11 6.6 0.0 3.0 3 0 0 3 3 2 0 AAA domain cobW PF02492.19 BAM39150.1 - 0.035 13.7 1.7 2.5 7.6 0.2 2.4 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain TsaE PF02367.17 BAM39150.1 - 0.039 13.9 1.8 10 6.1 0.1 3.1 3 0 0 3 3 3 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 BAM39150.1 - 0.041 14.0 0.7 11 6.2 0.2 2.7 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 BAM39150.1 - 0.046 13.3 0.1 6.4 6.3 0.0 2.9 3 0 0 3 3 3 0 AAA domain SMC_N PF02463.19 BAM39150.1 - 0.048 13.1 1.6 0.21 11.0 0.1 2.5 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain NACHT PF05729.12 BAM39150.1 - 0.054 13.4 1.7 3.8 7.4 0.1 2.6 2 0 0 2 2 2 0 NACHT domain AAA_10 PF12846.7 BAM39150.1 - 0.085 11.8 0.4 1.8 7.4 0.1 2.2 2 0 0 2 2 2 0 AAA-like domain AAA_22 PF13401.6 BAM39150.1 - 0.092 13.0 0.3 13 6.1 0.0 2.7 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.13 BAM39150.1 - 0.12 11.5 0.8 2.4 7.3 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF815) YhdB PF14148.6 BAM39150.1 - 0.12 12.4 1.1 0.2 11.7 0.0 1.9 2 0 0 2 2 1 0 YhdB-like protein NB-ARC PF00931.22 BAM39150.1 - 0.14 11.3 2.6 0.46 9.6 0.2 2.3 2 0 0 2 2 2 0 NB-ARC domain DnaB_C PF03796.15 BAM39150.1 - 0.16 11.2 0.1 4.5 6.5 0.0 2.4 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain TrwB_AAD_bind PF10412.9 BAM39150.1 - 0.2 10.6 1.7 5.6 5.8 0.1 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain SRP54 PF00448.22 BAM39150.1 - 0.22 11.1 1.7 0.26 10.9 0.2 1.9 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain MobB PF03205.14 BAM39150.1 - 0.27 11.1 1.7 3 7.8 0.3 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B ABC_tran PF00005.27 BAM39151.1 - 5.4e-33 114.4 0.0 3.1e-17 63.4 0.0 2.4 2 0 0 2 2 2 2 ABC transporter RsgA_GTPase PF03193.16 BAM39151.1 - 2.1e-05 24.5 1.6 0.025 14.5 0.3 2.4 2 0 0 2 2 2 2 RsgA GTPase Zeta_toxin PF06414.12 BAM39151.1 - 2.2e-05 23.8 0.3 0.083 12.2 0.1 2.4 2 0 0 2 2 2 2 Zeta toxin AAA_29 PF13555.6 BAM39151.1 - 0.00013 21.7 0.6 0.34 10.7 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_23 PF13476.6 BAM39151.1 - 0.0011 19.5 1.0 0.73 10.3 0.0 3.7 3 0 0 3 3 3 1 AAA domain AAA_30 PF13604.6 BAM39151.1 - 0.0012 18.6 0.5 0.14 11.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain MeaB PF03308.16 BAM39151.1 - 0.0013 17.8 0.3 0.47 9.4 0.2 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 BAM39151.1 - 0.0018 18.7 0.1 1.5 9.2 0.0 2.4 2 0 0 2 2 2 1 AAA ATPase domain AAA_21 PF13304.6 BAM39151.1 - 0.0054 16.6 0.6 1.7 8.4 0.1 3.3 4 0 0 4 4 3 1 AAA domain, putative AbiEii toxin, Type IV TA system T2SSE PF00437.20 BAM39151.1 - 0.0088 15.1 0.5 1.8 7.6 0.1 2.2 2 0 0 2 2 2 1 Type II/IV secretion system protein YmcE_antitoxin PF15939.5 BAM39151.1 - 0.011 15.8 0.6 0.1 12.8 0.6 2.7 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system DUF87 PF01935.17 BAM39151.1 - 0.017 15.2 3.5 2.1 8.4 0.2 2.7 2 0 0 2 2 2 0 Helicase HerA, central domain FtsK_SpoIIIE PF01580.18 BAM39151.1 - 0.02 14.3 0.2 0.62 9.4 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family MMR_HSR1 PF01926.23 BAM39151.1 - 0.033 14.3 0.6 1.5 8.9 0.1 2.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase TsaE PF02367.17 BAM39151.1 - 0.041 13.9 0.3 12 6.0 0.1 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE cobW PF02492.19 BAM39151.1 - 0.044 13.4 1.7 2.9 7.5 0.2 2.4 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 BAM39151.1 - 0.045 14.3 0.2 12 6.4 0.0 3.0 3 0 0 3 3 2 0 AAA domain NB-ARC PF00931.22 BAM39151.1 - 0.048 12.8 1.6 0.52 9.4 0.2 2.8 3 0 0 3 3 3 0 NB-ARC domain YhdB PF14148.6 BAM39151.1 - 0.052 13.7 0.0 0.23 11.6 0.0 2.1 1 0 0 1 1 1 0 YhdB-like protein AAA_33 PF13671.6 BAM39151.1 - 0.053 13.7 0.7 12 6.0 0.2 2.7 2 0 0 2 2 2 0 AAA domain SMC_N PF02463.19 BAM39151.1 - 0.057 12.9 1.6 0.24 10.8 0.1 2.6 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain NACHT PF05729.12 BAM39151.1 - 0.059 13.3 1.7 4.3 7.2 0.1 2.7 2 0 0 2 2 2 0 NACHT domain AAA_25 PF13481.6 BAM39151.1 - 0.063 12.8 0.1 7.3 6.1 0.0 2.8 3 0 0 3 3 3 0 AAA domain AAA_10 PF12846.7 BAM39151.1 - 0.11 11.4 0.4 2.1 7.2 0.1 2.2 2 0 0 2 2 2 0 AAA-like domain AAA_22 PF13401.6 BAM39151.1 - 0.12 12.7 0.3 14 5.9 0.0 2.7 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.13 BAM39151.1 - 0.15 11.2 0.8 2.7 7.1 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF815) TrwB_AAD_bind PF10412.9 BAM39151.1 - 0.26 10.2 1.7 6.3 5.6 0.1 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain SRP54 PF00448.22 BAM39151.1 - 0.27 10.8 1.7 0.29 10.7 0.2 1.8 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Comm PF15957.5 BAM39151.1 - 0.29 11.5 5.0 1.3 9.4 0.9 3.5 3 0 0 3 3 3 0 Commissureless MobB PF03205.14 BAM39151.1 - 0.31 10.9 1.5 3.5 7.5 0.3 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B ATP_bind_1 PF03029.17 BAM39151.1 - 0.85 9.3 6.8 3.9 7.2 0.2 3.0 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein P53_TAD PF08563.11 BAM39152.1 - 0.29 10.7 0.2 0.29 10.7 0.2 1.8 2 0 0 2 2 2 0 P53 transactivation motif GDPD PF03009.17 BAM39153.1 - 2.6e-18 66.7 0.1 3.3e-14 53.2 0.0 2.8 2 1 0 2 2 2 2 Glycerophosphoryl diester phosphodiesterase family Adap_comp_sub PF00928.21 BAM39154.1 - 1.5e-50 172.0 1.5 2.1e-50 171.6 1.5 1.1 1 0 0 1 1 1 1 Adaptor complexes medium subunit family Clat_adaptor_s PF01217.20 BAM39154.1 - 0.0021 18.0 2.4 0.031 14.2 1.1 2.4 2 0 0 2 2 2 1 Clathrin adaptor complex small chain Methyltransf_15 PF09445.10 BAM39155.1 - 3.4e-26 91.8 0.0 8e-26 90.6 0.0 1.7 1 1 1 2 2 2 1 RNA cap guanine-N2 methyltransferase UPF0020 PF01170.18 BAM39155.1 - 0.023 14.4 0.2 1.7 8.3 0.2 2.5 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 VASt PF16016.5 BAM39156.1 - 0.0012 19.2 14.3 0.053 13.9 3.2 4.3 4 0 0 4 4 4 2 VAD1 Analog of StAR-related lipid transfer domain GRAM PF02893.20 BAM39156.1 - 0.02 14.8 0.1 0.075 12.9 0.1 2.0 1 0 0 1 1 1 0 GRAM domain Ribosomal_S18 PF01084.20 BAM39157.1 - 1.7e-15 57.0 0.1 6.6e-15 55.1 0.1 2.1 1 0 0 1 1 1 1 Ribosomal protein S18 DUF1283 PF06932.11 BAM39157.1 - 0.097 12.9 3.4 1.2 9.3 0.2 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF1283) DUF1366 PF07104.11 BAM39157.1 - 0.25 11.1 3.4 0.13 11.9 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1366) DUF4065 PF13274.6 BAM39157.1 - 0.98 10.3 8.4 0.4 11.6 1.0 3.0 3 1 0 3 3 3 0 Protein of unknown function (DUF4065) PDE4_UCR PF18100.1 BAM39157.1 - 1.1 9.9 6.7 8.7 7.0 0.3 2.7 2 1 0 2 2 2 0 Phosphodiesterase 4 upstream conserved regions (UCR) DUF327 PF03885.13 BAM39157.1 - 4.4 7.3 19.3 32 4.5 14.4 3.3 2 1 0 2 2 2 0 Protein of unknown function (DUF327) PDEase_I PF00233.19 BAM39158.1 - 7.7e-60 202.6 0.3 1.1e-59 202.1 0.3 1.1 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase DnaJ PF00226.31 BAM39159.1 - 3.5e-26 91.1 2.8 5.3e-26 90.5 2.8 1.3 1 0 0 1 1 1 1 DnaJ domain Grg1 PF11034.8 BAM39159.1 - 0.87 9.9 5.6 0.44 10.8 0.7 2.2 2 0 0 2 2 2 0 Glucose-repressible protein Grg1 MCM PF00493.23 BAM39160.1 - 5.8e-55 185.8 0.1 1.1e-54 185.0 0.1 1.4 1 0 0 1 1 1 1 MCM P-loop domain MCM_lid PF17855.1 BAM39160.1 - 2.5e-17 63.1 0.1 1.1e-16 61.0 0.0 2.1 2 0 0 2 2 2 1 MCM AAA-lid domain MCM_OB PF17207.3 BAM39160.1 - 7.7e-14 51.6 0.4 1.6e-13 50.6 0.4 1.5 1 0 0 1 1 1 1 MCM OB domain AAA_5 PF07728.14 BAM39160.1 - 2.2e-08 34.2 0.3 1.6e-07 31.4 0.1 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 BAM39160.1 - 3.1e-06 26.7 1.1 0.014 14.8 0.0 2.8 1 1 1 2 2 2 2 Magnesium chelatase, subunit ChlI AAA PF00004.29 BAM39160.1 - 3.2e-05 24.3 2.8 6.3e-05 23.4 0.2 2.7 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 BAM39160.1 - 4.6e-05 23.2 0.3 0.00025 20.8 0.1 2.3 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_3 PF07726.11 BAM39160.1 - 0.00019 21.3 0.0 0.00043 20.2 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 BAM39160.1 - 0.0011 18.7 0.5 0.064 13.0 0.5 2.7 1 1 0 1 1 1 1 Sigma-54 interaction domain IstB_IS21 PF01695.17 BAM39160.1 - 0.0022 17.7 0.1 0.0068 16.2 0.1 1.9 2 0 0 2 2 2 1 IstB-like ATP binding protein AAA_16 PF13191.6 BAM39160.1 - 0.0027 18.1 0.0 0.0053 17.2 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 BAM39160.1 - 0.12 12.6 0.4 0.95 9.7 0.1 2.4 1 1 0 2 2 2 0 AAA domain Amino_oxidase PF01593.24 BAM39161.1 - 2.9e-39 135.6 0.0 2.8e-29 102.7 0.0 2.9 2 1 0 2 2 2 2 Flavin containing amine oxidoreductase NAD_binding_8 PF13450.6 BAM39161.1 - 3.9e-12 46.2 0.0 9.3e-12 45.0 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 BAM39161.1 - 5.6e-07 29.0 0.0 1.2e-06 27.9 0.0 1.5 1 0 0 1 1 1 1 Thi4 family Pyr_redox_2 PF07992.14 BAM39161.1 - 1.7e-05 24.3 0.0 4.8e-05 22.7 0.0 1.8 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 BAM39161.1 - 0.00063 19.2 0.2 0.00063 19.2 0.2 4.3 4 1 0 4 4 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 BAM39161.1 - 0.00064 18.9 0.4 0.001 18.2 0.4 1.3 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 BAM39161.1 - 0.0015 18.2 1.4 0.0029 17.2 1.4 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase zf-HC5HC2H PF13771.6 BAM39161.1 - 0.0021 18.3 1.5 0.0075 16.5 1.5 2.0 1 0 0 1 1 1 1 PHD-like zinc-binding domain Pyr_redox PF00070.27 BAM39161.1 - 0.0039 17.7 0.1 0.0039 17.7 0.1 3.5 4 0 0 4 4 4 1 Pyridine nucleotide-disulphide oxidoreductase zf-RING-like PF08746.11 BAM39161.1 - 0.037 14.3 1.7 0.1 12.9 1.7 1.7 1 0 0 1 1 1 0 RING-like domain Lycopene_cycl PF05834.12 BAM39161.1 - 0.097 11.7 0.0 0.16 11.0 0.0 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein PHD PF00628.29 BAM39161.1 - 0.35 10.8 8.3 2.3 8.2 8.3 2.3 1 1 0 1 1 1 0 PHD-finger MCM PF00493.23 BAM39162.1 - 1.2e-84 282.9 0.1 2.2e-84 282.1 0.1 1.4 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 BAM39162.1 - 1.5e-28 99.2 1.3 3.2e-28 98.1 1.3 1.6 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 BAM39162.1 - 3e-26 91.7 3.0 6.9e-26 90.5 3.0 1.7 1 0 0 1 1 1 1 MCM AAA-lid domain Mg_chelatase PF01078.21 BAM39162.1 - 5e-06 26.1 0.0 2e-05 24.1 0.0 1.9 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 BAM39162.1 - 0.0015 18.3 0.0 0.0039 17.1 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 BAM39162.1 - 0.0053 16.7 0.2 0.039 13.9 0.0 2.7 3 1 0 3 3 3 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 BAM39162.1 - 0.013 15.2 0.0 0.048 13.4 0.0 1.9 2 0 0 2 2 2 0 Sigma-54 interaction domain NAD_binding_7 PF13241.6 BAM39162.1 - 0.05 14.1 0.2 7.5 7.0 0.0 3.7 4 1 0 4 4 4 0 Putative NAD(P)-binding MCM_N PF14551.6 BAM39162.1 - 1.6 9.4 8.0 32 5.2 4.6 3.2 2 1 0 2 2 2 0 MCM N-terminal domain ubiquitin PF00240.23 BAM39163.1 - 6.9e-71 234.0 4.2 1.1e-34 117.9 0.3 2.0 2 0 0 2 2 2 2 Ubiquitin family Rad60-SLD PF11976.8 BAM39163.1 - 9.3e-35 118.3 4.6 1.2e-16 60.3 0.4 2.0 2 0 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 BAM39163.1 - 6.2e-14 52.2 0.8 3.1e-05 24.3 0.1 3.2 2 2 0 2 2 2 2 Ubiquitin-like domain TBK1_ULD PF18396.1 BAM39163.1 - 1.8e-08 34.2 0.3 0.0068 16.3 0.1 2.2 2 0 0 2 2 2 2 TANK binding kinase 1 ubiquitin-like domain Ubiquitin_5 PF18037.1 BAM39163.1 - 5.8e-08 33.0 0.3 0.013 15.8 0.0 2.1 1 1 1 2 2 2 2 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 BAM39163.1 - 6.2e-08 32.7 0.3 0.02 15.0 0.0 2.8 2 2 0 2 2 2 2 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 BAM39163.1 - 7.1e-06 26.5 0.0 0.11 13.0 0.0 2.2 1 1 1 2 2 2 2 DUF2407 ubiquitin-like domain Ubiquitin_4 PF18036.1 BAM39163.1 - 4.8e-05 23.3 6.8 9.2 6.4 0.0 4.0 4 0 0 4 4 4 2 Ubiquitin-like domain Sde2_N_Ubi PF13019.6 BAM39163.1 - 0.00025 20.9 0.0 0.65 9.8 0.0 2.1 1 1 1 2 2 2 2 Silencing defective 2 N-terminal ubiquitin domain DUF2870 PF11069.8 BAM39163.1 - 0.014 15.8 0.1 11 6.5 0.0 2.8 2 2 2 4 4 4 0 Protein of unknown function (DUF2870) RBD PF02196.15 BAM39163.1 - 0.028 14.5 0.0 11 6.2 0.0 2.4 2 0 0 2 2 2 0 Raf-like Ras-binding domain FERM_f0 PF16511.5 BAM39163.1 - 0.046 14.0 2.0 32 4.9 0.1 3.7 2 2 0 2 2 2 0 N-terminal or F0 domain of Talin-head FERM DUF3861 PF12977.7 BAM39163.1 - 0.046 13.9 0.1 11 6.2 0.0 2.2 1 1 1 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3861) FlgD_ig PF13860.6 BAM39163.1 - 0.11 12.4 0.5 21 5.1 0.1 2.4 2 0 0 2 2 2 0 FlgD Ig-like domain TmoB PF06234.12 BAM39163.1 - 0.11 12.6 0.3 25 5.0 0.0 2.7 2 2 0 2 2 2 0 Toluene-4-monooxygenase system protein B (TmoB) UDP-g_GGTase PF06427.11 BAM39163.1 - 0.14 12.3 0.5 1.6 8.9 0.0 2.4 3 0 0 3 3 3 0 UDP-glucose:Glycoprotein Glucosyltransferase DUF969 PF06149.12 BAM39163.1 - 0.18 11.2 0.0 6.4 6.1 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF969) E1-E2_ATPase PF00122.20 BAM39164.1 - 5e-48 163.0 5.6 5e-48 163.0 5.6 1.8 2 0 0 2 2 2 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 BAM39164.1 - 5.6e-32 110.9 0.0 5.6e-32 110.9 0.0 2.4 3 0 0 3 3 3 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 BAM39164.1 - 9.2e-21 75.1 2.0 8.8e-16 58.8 0.4 3.4 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase Cation_ATPase_N PF00690.26 BAM39164.1 - 1.5e-15 56.6 0.0 3.3e-15 55.5 0.0 1.6 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Cation_ATPase PF13246.6 BAM39164.1 - 1.4e-14 53.9 0.2 4.6e-14 52.3 0.0 2.0 2 0 0 2 2 2 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 BAM39164.1 - 0.0089 15.8 1.9 0.075 12.8 1.0 2.4 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 BAM39164.1 - 0.02 15.3 0.0 0.16 12.3 0.0 2.4 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase DUF5362 PF17319.2 BAM39164.1 - 0.094 12.6 2.3 0.15 11.9 0.3 2.3 2 0 0 2 2 2 0 Family of unknown function (DUF5362) SpoIIM PF01944.17 BAM39164.1 - 0.4 10.7 0.0 0.4 10.7 0.0 3.3 4 0 0 4 4 4 0 Stage II sporulation protein M Amastin PF07344.11 BAM39164.1 - 0.49 10.2 5.2 21 4.9 1.0 3.3 3 0 0 3 3 3 0 Amastin surface glycoprotein Uso1_p115_C PF04871.13 BAM39165.1 - 3.7 7.9 7.5 0.51 10.7 2.7 2.0 2 0 0 2 2 2 0 Uso1 / p115 like vesicle tethering protein, C terminal region G-patch PF01585.23 BAM39166.1 - 1e-05 25.3 0.6 2.8e-05 23.9 0.6 1.7 1 0 0 1 1 1 1 G-patch domain Laminin_II PF06009.12 BAM39166.1 - 0.025 14.6 2.3 0.12 12.4 2.3 2.2 1 0 0 1 1 1 0 Laminin Domain II Globin PF00042.22 BAM39166.1 - 0.15 12.6 0.1 6.6 7.3 0.0 3.0 3 0 0 3 3 3 0 Globin Ribosomal_S16 PF00886.19 BAM39167.1 - 3.4e-11 43.1 0.0 9e-11 41.7 0.0 1.6 1 0 0 1 1 1 1 Ribosomal protein S16 TPT PF03151.16 BAM39168.1 - 9.8e-11 41.5 1.6 3.6e-10 39.7 0.4 2.3 2 1 0 2 2 2 1 Triose-phosphate Transporter family EamA PF00892.20 BAM39168.1 - 0.00083 19.5 8.2 0.23 11.6 0.1 3.3 4 0 0 4 4 4 2 EamA-like transporter family FAST_1 PF06743.15 BAM39169.1 - 0.00068 19.5 3.4 1.6 8.7 0.0 4.9 3 1 3 6 6 6 1 FAST kinase-like protein, subdomain 1 Cytochrom_C550 PF14495.6 BAM39169.1 - 0.0043 16.8 0.1 0.028 14.1 0.0 2.2 1 1 1 2 2 2 1 Cytochrome c-550 domain DUF496 PF04363.12 BAM39169.1 - 0.017 15.2 2.6 0.43 10.6 0.2 3.7 2 1 1 3 3 3 0 Protein of unknown function (DUF496) RPAP3_C PF13877.6 BAM39169.1 - 0.023 15.2 2.3 0.17 12.4 0.1 3.4 2 1 1 3 3 3 0 Potential Monad-binding region of RPAP3 FANCI_S2 PF14676.6 BAM39169.1 - 3.9 7.7 8.5 19 5.5 0.8 3.7 2 1 2 4 4 4 0 FANCI solenoid 2 Adap_comp_sub PF00928.21 BAM39170.1 - 6.8e-78 261.7 0.0 8.4e-78 261.4 0.0 1.1 1 0 0 1 1 1 1 Adaptor complexes medium subunit family Clat_adaptor_s PF01217.20 BAM39170.1 - 3.6e-06 27.0 0.8 9.1e-06 25.7 0.8 1.7 1 0 0 1 1 1 1 Clathrin adaptor complex small chain AAA PF00004.29 BAM39171.1 - 3.7e-41 140.6 0.0 7.1e-41 139.7 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 BAM39171.1 - 1.4e-09 37.6 0.1 3.7e-09 36.2 0.1 1.7 1 0 0 1 1 1 1 AAA+ lid domain AAA_22 PF13401.6 BAM39171.1 - 5.1e-06 26.8 0.2 0.0092 16.3 0.0 2.7 1 1 1 2 2 2 2 AAA domain AAA_16 PF13191.6 BAM39171.1 - 2.6e-05 24.7 0.2 0.0021 18.5 0.0 2.3 1 1 1 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 BAM39171.1 - 4e-05 23.6 0.1 0.00013 22.0 0.1 1.9 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 BAM39171.1 - 0.00011 22.4 0.0 0.00024 21.3 0.0 1.6 1 1 0 1 1 1 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 BAM39171.1 - 0.00053 19.8 0.0 0.0012 18.6 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain DUF815 PF05673.13 BAM39171.1 - 0.002 17.4 0.0 0.0032 16.7 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_18 PF13238.6 BAM39171.1 - 0.0079 16.7 0.0 0.019 15.5 0.0 1.7 2 0 0 2 2 1 1 AAA domain AAA_7 PF12775.7 BAM39171.1 - 0.011 15.3 0.0 0.042 13.4 0.0 1.8 1 1 0 1 1 1 0 P-loop containing dynein motor region AAA_28 PF13521.6 BAM39171.1 - 0.019 15.2 0.0 0.03 14.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 BAM39171.1 - 0.022 14.9 0.0 0.037 14.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 BAM39171.1 - 0.039 13.7 0.0 0.13 12.0 0.0 1.9 2 0 0 2 2 2 0 AAA domain AAA_11 PF13086.6 BAM39171.1 - 0.054 13.3 0.0 0.096 12.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 BAM39171.1 - 0.064 12.6 0.0 0.14 11.6 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 BAM39171.1 - 0.07 13.5 0.0 0.3 11.5 0.0 2.0 2 0 0 2 2 2 0 RNA helicase ATPase_2 PF01637.18 BAM39171.1 - 0.12 12.3 0.0 8.5 6.2 0.0 2.3 1 1 0 2 2 2 0 ATPase domain predominantly from Archaea IstB_IS21 PF01695.17 BAM39171.1 - 0.16 11.7 0.0 0.26 11.0 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein Sigma54_activat PF00158.26 BAM39171.1 - 0.17 11.6 0.0 0.49 10.1 0.0 1.7 2 0 0 2 2 2 0 Sigma-54 interaction domain Goodbye PF17109.5 BAM39172.1 - 0.13 12.7 0.8 24 5.4 0.1 2.7 2 0 0 2 2 2 0 fungal STAND N-terminal Goodbye domain RPN1_RPN2_N PF17781.1 BAM39173.1 - 3.1e-42 145.1 7.5 6.6e-42 144.0 7.5 1.5 1 0 0 1 1 1 1 RPN1/RPN2 N-terminal domain RPN1_C PF18051.1 BAM39173.1 - 8.2e-19 67.4 0.0 2.2e-18 66.0 0.0 1.8 1 0 0 1 1 1 1 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal PC_rep PF01851.22 BAM39173.1 - 4.2e-14 52.2 13.8 0.0031 17.9 0.0 7.9 7 0 0 7 7 7 4 Proteasome/cyclosome repeat Utp13 PF08625.11 BAM39173.1 - 0.0028 17.6 0.2 0.011 15.6 0.2 2.0 1 0 0 1 1 1 1 Utp13 specific WD40 associated domain HEAT_2 PF13646.6 BAM39173.1 - 0.005 17.2 0.0 0.13 12.7 0.0 2.9 2 0 0 2 2 2 1 HEAT repeats TPR_15 PF13429.6 BAM39173.1 - 0.011 14.9 0.8 0.023 13.9 0.2 1.8 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_5 PF12688.7 BAM39173.1 - 0.074 13.3 1.4 0.17 12.2 0.1 2.2 2 0 0 2 2 2 0 Tetratrico peptide repeat Med13_C PF06333.12 BAM39173.1 - 0.074 12.3 2.6 0.15 11.3 2.6 1.4 1 0 0 1 1 1 0 Mediator complex subunit 13 C-terminal domain FHA PF00498.26 BAM39174.1 - 2e-07 31.2 0.0 5.6e-07 29.8 0.0 1.8 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 BAM39174.1 - 0.0054 17.0 0.0 0.021 15.1 0.0 2.0 2 0 0 2 2 2 1 Inner membrane component of T3SS, cytoplasmic domain K-box PF01486.17 BAM39174.1 - 0.27 11.4 3.8 0.32 11.2 0.2 2.4 2 0 0 2 2 2 0 K-box region eIF2A PF08662.11 BAM39175.1 - 1.3e-70 237.3 0.1 2.3e-68 229.9 0.1 2.3 2 0 0 2 2 2 2 Eukaryotic translation initiation factor eIF2A Coatomer_WDAD PF04053.14 BAM39175.1 - 0.033 13.3 0.2 0.056 12.5 0.2 1.4 1 0 0 1 1 1 0 Coatomer WD associated region DnaJ_C PF01556.18 BAM39176.1 - 2.4e-38 131.5 0.1 3.7e-38 130.9 0.1 1.3 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 BAM39176.1 - 1.2e-24 86.2 1.8 2.1e-24 85.4 1.8 1.4 1 0 0 1 1 1 1 DnaJ domain HEAT_2 PF13646.6 BAM39177.1 - 1.8e-20 73.1 0.4 1.9e-09 37.8 0.1 2.4 2 0 0 2 2 2 2 HEAT repeats HEAT_PBS PF03130.16 BAM39177.1 - 1.6e-15 56.1 1.0 0.0064 17.1 0.0 6.4 6 1 0 6 6 6 3 PBS lyase HEAT-like repeat HEAT PF02985.22 BAM39177.1 - 1.8e-07 30.8 3.2 2.5 8.6 0.0 5.3 5 0 0 5 5 5 4 HEAT repeat Cnd1 PF12717.7 BAM39177.1 - 5.8e-06 26.5 1.4 0.0013 18.8 0.1 2.8 2 1 0 2 2 2 1 non-SMC mitotic condensation complex subunit 1 Aconitase_B_N PF11791.8 BAM39177.1 - 0.0056 16.8 0.0 0.22 11.6 0.0 2.4 2 0 0 2 2 2 1 Aconitate B N-terminal domain Arm PF00514.23 BAM39177.1 - 0.045 13.8 0.2 21 5.4 0.0 3.0 2 1 0 2 2 2 0 Armadillo/beta-catenin-like repeat DUF4806 PF16064.5 BAM39177.1 - 0.18 12.1 0.8 4.8 7.6 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4806) RAP-1 PF03085.15 BAM39178.1 - 6.2e-108 360.0 43.3 3.5e-44 151.3 9.7 3.1 1 1 2 3 3 3 3 Rhoptry-associated protein 1 (RAP-1) Crr6 PF08847.11 BAM39178.1 - 0.0032 17.1 0.3 0.0085 15.8 0.3 1.7 1 0 0 1 1 1 1 Chlororespiratory reduction 6 Ripply PF14998.6 BAM39178.1 - 0.01 16.4 0.1 0.045 14.4 0.1 2.1 1 0 0 1 1 1 0 Transcription Regulator Pox_LP_H2 PF03356.15 BAM39178.1 - 0.022 14.7 0.8 0.069 13.0 0.8 1.8 1 0 0 1 1 1 0 Viral late protein H2 RAP-1 PF03085.15 BAM39179.1 - 5.7e-90 301.2 11.7 1.9e-66 224.2 4.0 2.4 1 1 1 2 2 2 2 Rhoptry-associated protein 1 (RAP-1) DUF3388 PF11868.8 BAM39179.1 - 0.095 12.0 0.1 0.21 10.9 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3388) DUF4852 PF16144.5 BAM39179.1 - 1.3 9.2 5.8 2.2 8.4 0.1 3.7 3 1 1 4 4 4 0 Domain of unknown function (DUF4852) RAP-1 PF03085.15 BAM39180.1 - 6.7e-71 238.8 8.0 4e-25 88.9 0.3 3.4 3 1 0 3 3 3 3 Rhoptry-associated protein 1 (RAP-1) GPAT_N PF14829.6 BAM39180.1 - 0.048 13.6 0.0 0.12 12.4 0.0 1.7 1 0 0 1 1 1 0 Glycerol-3-phosphate acyltransferase N-terminal PP28 PF10252.9 BAM39181.1 - 6.3e-15 55.4 19.8 1.5e-14 54.2 19.8 1.8 1 1 0 1 1 1 1 Casein kinase substrate phosphoprotein PP28 POX PF07526.11 BAM39181.1 - 0.011 16.3 2.9 0.018 15.6 2.9 1.3 1 0 0 1 1 1 0 Associated with HOX Trypan_PARP PF05887.11 BAM39181.1 - 0.033 14.2 7.9 0.045 13.7 7.9 1.2 1 0 0 1 1 1 0 Procyclic acidic repetitive protein (PARP) Nop53 PF07767.11 BAM39181.1 - 0.056 12.8 20.4 0.062 12.7 20.4 1.0 1 0 0 1 1 1 0 Nop53 (60S ribosomal biogenesis) DUF2407 PF10302.9 BAM39181.1 - 0.79 10.3 6.1 0.14 12.7 1.6 1.8 1 1 1 2 2 2 0 DUF2407 ubiquitin-like domain CSRNP_N PF16019.5 BAM39181.1 - 1 9.3 6.4 0.65 9.9 5.1 1.3 1 1 0 1 1 1 0 Cysteine/serine-rich nuclear protein N-terminus VSG_B PF13206.6 BAM39181.1 - 3.4 6.8 7.0 4.1 6.6 7.0 1.0 1 0 0 1 1 1 0 Trypanosomal VSG domain HA2 PF04408.23 BAM39182.1 - 2e-07 31.2 0.0 7.4e-07 29.4 0.0 2.0 1 0 0 1 1 1 1 Helicase associated domain (HA2) Helicase_C PF00271.31 BAM39182.1 - 2.3e-06 27.9 0.0 6e-05 23.4 0.0 2.9 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 BAM39182.1 - 0.00011 22.0 0.3 0.00042 20.1 0.3 1.9 1 1 0 1 1 1 1 DEAD/DEAH box helicase AAA_19 PF13245.6 BAM39182.1 - 0.00052 20.4 0.0 0.0013 19.1 0.0 1.7 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 BAM39182.1 - 0.0027 17.1 0.0 0.0068 15.8 0.0 1.6 1 0 0 1 1 1 1 KaiC AAA_22 PF13401.6 BAM39182.1 - 0.0031 17.8 2.8 0.0046 17.2 0.3 2.5 2 1 0 2 2 2 1 AAA domain DUF2075 PF09848.9 BAM39182.1 - 0.0047 16.2 0.0 0.009 15.3 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) T2SSE PF00437.20 BAM39182.1 - 0.005 15.9 0.0 0.011 14.9 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_30 PF13604.6 BAM39182.1 - 0.017 14.8 0.0 0.063 13.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 BAM39182.1 - 0.035 13.6 0.3 0.25 10.8 0.0 2.5 3 0 0 3 3 3 0 P-loop containing dynein motor region AAA_29 PF13555.6 BAM39182.1 - 0.049 13.4 0.0 0.14 11.9 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain PhoH PF02562.16 BAM39182.1 - 0.061 12.8 0.0 0.22 10.9 0.0 1.9 1 0 0 1 1 1 0 PhoH-like protein ResIII PF04851.15 BAM39182.1 - 0.071 13.1 0.1 0.071 13.1 0.1 2.4 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_23 PF13476.6 BAM39182.1 - 3.2 8.2 0.0 3.2 8.2 0.0 4.1 4 0 0 4 4 4 0 AAA domain zf-RING_2 PF13639.6 BAM39183.1 - 1.2e-11 44.7 3.3 1.2e-11 44.7 3.3 2.2 2 0 0 2 2 2 1 Ring finger domain zf-RING_11 PF17123.5 BAM39183.1 - 4.4e-09 35.9 1.6 4.4e-09 35.9 1.6 2.9 4 0 0 4 4 4 1 RING-like zinc finger zf-C3HC4 PF00097.25 BAM39183.1 - 5.1e-09 35.9 1.5 5.1e-09 35.9 1.5 2.9 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 BAM39183.1 - 1.3e-08 34.5 2.9 1.3e-08 34.5 2.9 2.4 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 BAM39183.1 - 1.1e-07 32.0 5.9 9.2e-07 29.1 5.9 2.3 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 BAM39183.1 - 1.3e-06 28.2 1.1 1.3e-06 28.2 1.1 2.5 3 0 0 3 3 3 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 BAM39183.1 - 3.4e-06 27.0 3.1 4.5e-06 26.6 0.7 2.4 3 0 0 3 3 2 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 BAM39183.1 - 0.0047 16.7 1.6 0.0047 16.7 1.6 2.2 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 BAM39183.1 - 0.0075 16.3 2.5 0.025 14.6 2.5 2.0 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger FANCL_C PF11793.8 BAM39183.1 - 0.25 11.6 4.6 1.6 8.9 4.6 2.4 1 1 0 1 1 1 0 FANCL C-terminal domain RINGv PF12906.7 BAM39183.1 - 0.44 10.7 3.1 1.5 9.0 3.1 2.0 1 0 0 1 1 1 0 RING-variant domain zf-P11 PF03854.14 BAM39183.1 - 1.1 9.0 7.3 0.4 10.4 3.7 2.2 2 0 0 2 2 2 0 P-11 zinc finger PHD PF00628.29 BAM39183.1 - 1.4 8.9 7.9 0.18 11.7 2.6 2.2 2 0 0 2 2 2 0 PHD-finger Prok-RING_4 PF14447.6 BAM39183.1 - 2.6 8.0 11.4 0.24 11.3 3.9 2.7 2 1 1 3 3 2 0 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 BAM39183.1 - 3.9 7.2 6.3 0.91 9.2 1.8 2.3 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type PTPA PF03095.15 BAM39185.1 - 3.1e-69 233.7 0.0 3.8e-69 233.4 0.0 1.0 1 0 0 1 1 1 1 Phosphotyrosyl phosphate activator (PTPA) protein His_Phos_2 PF00328.22 BAM39186.1 - 6.8e-52 177.1 2.2 1e-34 120.5 0.2 3.3 3 0 0 3 3 3 3 Histidine phosphatase superfamily (branch 2) PPIP5K2_N PF18086.1 BAM39186.1 - 5.2e-33 113.1 0.4 1.5e-32 111.6 0.4 1.9 1 0 0 1 1 1 1 Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain RimK PF08443.11 BAM39186.1 - 3.7e-05 23.4 0.0 7.6e-05 22.4 0.0 1.5 1 0 0 1 1 1 1 RimK-like ATP-grasp domain FAINT PF04385.15 BAM39188.1 - 3.3e-05 23.9 2.3 6.2e-05 23.0 2.3 1.5 1 0 0 1 1 1 1 Domain of unknown function, DUF529 DUF5110 PF17137.4 BAM39188.1 - 0.11 12.7 0.2 0.24 11.7 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF5110) SpoIIIAH PF12685.7 BAM39188.1 - 2.7 7.8 18.7 0.32 10.8 2.6 2.2 2 0 0 2 2 2 0 SpoIIIAH-like protein DUF4667 PF15700.5 BAM39188.1 - 3.5 7.6 12.3 0.51 10.4 5.8 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4667) CCDC106 PF15794.5 BAM39188.1 - 6.7 6.3 12.7 4.3 7.0 3.0 2.2 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 106 Asp PF00026.23 BAM39189.1 - 2.7e-57 194.6 0.2 4.8e-57 193.8 0.2 1.5 1 0 0 1 1 1 1 Eukaryotic aspartyl protease VPS28 PF03997.12 BAM39189.1 - 9.6e-40 136.3 0.4 1.5e-39 135.6 0.4 1.3 1 0 0 1 1 1 1 VPS28 protein TAXi_N PF14543.6 BAM39189.1 - 2e-08 34.7 4.6 7.9e-07 29.5 0.4 3.1 2 1 0 2 2 2 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 BAM39189.1 - 0.0095 15.7 0.0 0.38 10.5 0.0 2.8 2 1 0 2 2 2 1 Xylanase inhibitor C-terminal Adaptin_N PF01602.20 BAM39191.1 - 3.5e-36 124.9 29.3 5.7e-34 117.6 18.4 4.1 4 0 0 4 4 4 2 Adaptin N terminal region Coatomer_b_Cpla PF14806.6 BAM39191.1 - 2.3e-24 85.8 0.0 2.2e-23 82.7 0.1 2.5 2 0 0 2 2 2 1 Coatomer beta subunit appendage platform Coatamer_beta_C PF07718.12 BAM39191.1 - 2.8e-15 56.5 0.0 8.5e-15 54.9 0.0 1.8 1 0 0 1 1 1 1 Coatomer beta C-terminal region RTP1_C1 PF10363.9 BAM39191.1 - 0.0012 19.0 0.4 0.064 13.4 0.0 3.7 3 0 0 3 3 3 1 Required for nuclear transport of RNA pol II C-terminus 1 FAST_1 PF06743.15 BAM39191.1 - 0.004 17.1 4.2 5 7.1 0.1 4.8 4 1 1 5 5 5 2 FAST kinase-like protein, subdomain 1 Cnd1 PF12717.7 BAM39191.1 - 0.18 11.9 0.0 0.18 11.9 0.0 5.2 5 1 1 6 6 6 0 non-SMC mitotic condensation complex subunit 1 FAINT PF04385.15 BAM39193.1 - 0.058 13.5 0.2 0.32 11.1 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function, DUF529 Raftlin PF15250.6 BAM39193.1 - 2.7 6.6 9.5 1.1 8.0 5.8 1.8 2 0 0 2 2 2 0 Raftlin FAINT PF04385.15 BAM39194.1 - 0.00044 20.3 0.5 0.00096 19.2 0.5 1.6 1 1 0 1 1 1 1 Domain of unknown function, DUF529 Diphthamide_syn PF01866.17 BAM39195.1 - 7.3e-36 124.1 6.6 1.4e-21 77.3 0.1 2.5 2 0 0 2 2 2 2 Putative diphthamide synthesis protein Ribosomal_L27A PF00828.19 BAM39195.1 - 1.1e-13 51.9 0.0 3.6e-13 50.3 0.0 1.9 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CPW_WPC PF09717.10 BAM39196.1 - 2.2e-34 118.2 23.5 3e-13 50.5 6.1 3.0 3 0 0 3 3 3 3 Plasmodium falciparum domain of unknown function (CPW_WPC) zf-primase PF09329.11 BAM39196.1 - 0.36 10.7 5.4 16 5.4 0.0 3.8 4 0 0 4 4 4 0 Primase zinc finger DEAD_2 PF06733.15 BAM39199.1 - 0.063 12.9 0.5 0.16 11.6 0.5 1.6 1 0 0 1 1 1 0 DEAD_2 HP0268 PF18618.1 BAM39201.1 - 2.3 8.7 6.3 0.45 11.0 0.7 2.8 3 0 0 3 3 3 0 HP0268 zf-UBP_var PF17807.1 BAM39203.1 - 0.059 13.1 0.0 0.17 11.6 0.0 1.8 1 0 0 1 1 1 0 Variant UBP zinc finger COX2 PF00116.20 BAM39204.1 - 2.3e-41 140.5 0.0 2.8e-41 140.2 0.0 1.1 1 0 0 1 1 1 1 Cytochrome C oxidase subunit II, periplasmic domain Ribosomal_L17 PF01196.19 BAM39205.1 - 3.1e-18 66.5 0.1 7.4e-18 65.2 0.0 1.7 2 0 0 2 2 2 1 Ribosomal protein L17 3HCDH_N PF02737.18 BAM39205.1 - 0.094 12.6 0.0 0.23 11.3 0.0 1.6 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MMR_HSR1 PF01926.23 BAM39206.1 - 6.3e-15 55.2 0.9 1.6e-12 47.5 0.1 3.1 3 0 0 3 3 3 2 50S ribosome-binding GTPase FeoB_N PF02421.18 BAM39206.1 - 6.4e-07 29.0 0.6 2.6e-06 27.0 0.6 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 BAM39206.1 - 5.1e-05 23.2 0.1 0.083 12.8 0.0 2.6 2 0 0 2 2 2 2 RsgA GTPase Roc PF08477.13 BAM39206.1 - 0.03 14.5 2.2 3.4 7.9 0.1 3.2 3 0 0 3 3 3 0 Ras of Complex, Roc, domain of DAPkinase Dynamin_N PF00350.23 BAM39206.1 - 0.14 12.2 3.7 4.2 7.4 0.0 3.4 3 0 0 3 3 3 0 Dynamin family Cas9-BH PF16593.5 BAM39207.1 - 0.015 15.0 0.8 35 4.2 0.0 3.6 3 1 1 4 4 4 0 Bridge helix of CRISPR-associated endonuclease Cas9 ToxB_N PF18224.1 BAM39207.1 - 0.077 12.9 0.6 66 3.6 0.0 4.6 4 3 3 7 7 7 0 ToxB N-terminal domain TSP_1 PF00090.19 BAM39207.1 - 0.1 12.8 3.9 6.1 7.2 0.5 3.0 1 1 0 2 2 2 0 Thrombospondin type 1 domain Orthopox_A49R PF06489.11 BAM39207.1 - 0.11 12.7 9.6 1.7 8.8 1.7 2.5 1 1 1 2 2 2 0 Orthopoxvirus A49R protein Pet191_N PF10203.9 BAM39207.1 - 0.29 11.4 8.7 35 4.8 0.2 4.2 1 1 3 4 4 4 0 Cytochrome c oxidase assembly protein PET191 DUF4909 PF16253.5 BAM39207.1 - 2.3 8.1 6.3 2.8 7.8 4.8 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4909) Urease_alpha PF00449.20 BAM39207.1 - 6.9 7.0 9.4 11 6.4 1.0 2.4 1 1 1 2 2 2 0 Urease alpha-subunit, N-terminal domain Pkinase PF00069.25 BAM39209.1 - 1.8e-65 220.9 0.2 2.8e-65 220.3 0.2 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM39209.1 - 2.9e-27 95.6 1.3 3.3e-24 85.6 0.3 2.4 1 1 1 2 2 2 2 Protein tyrosine kinase Haspin_kinase PF12330.8 BAM39209.1 - 4.3e-07 29.2 1.5 1.1e-06 27.9 1.5 1.7 1 1 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 BAM39209.1 - 0.0035 16.7 0.3 0.0056 16.1 0.3 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Kinase-like PF14531.6 BAM39209.1 - 0.084 12.2 0.8 0.39 10.0 0.1 2.2 2 1 0 2 2 2 0 Kinase-like APH PF01636.23 BAM39209.1 - 0.21 11.5 0.0 9.2 6.1 0.0 2.1 2 0 0 2 2 2 0 Phosphotransferase enzyme family ATP-grasp_2 PF08442.10 BAM39210.1 - 4.5e-54 183.1 0.0 6.3e-54 182.6 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain Ligase_CoA PF00549.19 BAM39210.1 - 6.7e-18 65.0 0.1 1.3e-17 64.0 0.1 1.5 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 BAM39210.1 - 0.00093 19.0 0.0 0.0019 18.0 0.0 1.5 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain GARS_A PF01071.19 BAM39210.1 - 0.011 15.5 1.3 0.036 13.8 0.9 2.0 2 1 0 2 2 2 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SF-assemblin PF06705.11 BAM39211.1 - 5.6e-15 55.4 29.0 7.1e-15 55.0 29.0 1.0 1 0 0 1 1 1 1 SF-assemblin/beta giardin TSA PF03249.13 BAM39211.1 - 0.0035 16.2 1.9 0.0051 15.7 1.9 1.2 1 0 0 1 1 1 1 Type specific antigen DUF1465 PF07323.12 BAM39211.1 - 0.017 15.0 1.7 0.032 14.1 0.9 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF1465) Imm74 PF15603.6 BAM39211.1 - 0.12 12.6 1.8 0.26 11.5 0.3 2.3 2 0 0 2 2 2 0 Immunity protein 74 DUF4164 PF13747.6 BAM39211.1 - 3.3 8.0 10.5 7.4 6.9 4.6 3.7 2 1 2 4 4 4 0 Domain of unknown function (DUF4164) ING PF12998.7 BAM39211.1 - 3.6 8.2 16.9 0.17 12.5 5.8 3.3 1 1 4 5 5 5 0 Inhibitor of growth proteins N-terminal histone-binding SlyX PF04102.12 BAM39211.1 - 4.9 7.9 6.4 31 5.3 0.3 3.4 2 1 2 4 4 4 0 SlyX DUF1664 PF07889.12 BAM39211.1 - 9.4 6.3 14.6 1.6 8.8 3.2 3.5 2 2 2 4 4 4 0 Protein of unknown function (DUF1664) Ribosomal_L14e PF01929.17 BAM39212.1 - 1.6e-21 76.6 8.3 1.9e-21 76.3 8.3 1.1 1 0 0 1 1 1 1 Ribosomal protein L14 RVP PF00077.20 BAM39212.1 - 0.024 14.9 0.0 0.031 14.6 0.0 1.2 1 0 0 1 1 1 0 Retroviral aspartyl protease DUF773 PF05600.12 BAM39213.1 - 1.4e-25 90.0 18.9 3e-19 69.1 9.2 2.0 1 1 1 2 2 2 2 CDK5 regulatory subunit-associated protein 3 ApoA-II PF04711.13 BAM39213.1 - 0.14 12.3 0.1 0.14 12.3 0.1 2.3 2 0 0 2 2 2 0 Apolipoprotein A-II (ApoA-II) Fib_alpha PF08702.10 BAM39213.1 - 2.8 8.1 10.4 0.53 10.5 1.9 2.6 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family Syntaxin PF00804.25 BAM39214.1 - 2.1e-06 27.6 4.8 0.019 14.7 0.1 2.3 2 0 0 2 2 2 2 Syntaxin Fib_alpha PF08702.10 BAM39214.1 - 0.016 15.4 11.3 0.069 13.3 2.4 2.6 2 1 0 2 2 2 0 Fibrinogen alpha/beta chain family Syntaxin_2 PF14523.6 BAM39214.1 - 0.024 15.0 2.6 0.024 15.0 2.6 2.5 2 0 0 2 2 2 0 Syntaxin-like protein HAUS4 PF14735.6 BAM39214.1 - 0.1 12.3 3.2 0.23 11.2 3.2 1.5 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 4 Spc42p PF11544.8 BAM39214.1 - 0.11 12.5 0.2 0.11 12.5 0.2 2.9 3 0 0 3 3 3 0 Spindle pole body component Spc42p DUF16 PF01519.16 BAM39214.1 - 0.36 11.3 7.5 1.4 9.4 1.2 2.7 2 1 1 3 3 3 0 Protein of unknown function DUF16 Nop10p PF04135.12 BAM39215.1 - 1e-21 76.7 0.1 1.1e-21 76.6 0.1 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family Rtf2 PF04641.12 BAM39216.1 - 8.6e-48 163.0 0.1 9.8e-48 162.8 0.1 1.0 1 0 0 1 1 1 1 Rtf2 RING-finger zf-NOSIP PF15906.5 BAM39216.1 - 0.00011 22.3 0.0 0.00027 21.0 0.0 1.7 1 0 0 1 1 1 1 Zinc-finger of nitric oxide synthase-interacting protein PknG_rubred PF16919.5 BAM39216.1 - 0.0022 18.2 0.9 0.0036 17.5 0.9 1.3 1 0 0 1 1 1 1 Protein kinase G rubredoxin domain zf-Nse PF11789.8 BAM39216.1 - 0.0034 17.2 0.9 0.033 14.0 0.9 2.2 1 1 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-RING_4 PF14570.6 BAM39216.1 - 0.023 14.5 1.2 0.041 13.7 1.2 1.5 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-ANAPC11 PF12861.7 BAM39216.1 - 0.043 13.9 0.5 0.17 12.0 0.6 1.8 1 1 1 2 2 2 0 Anaphase-promoting complex subunit 11 RING-H2 finger Rad50_zn_hook PF04423.14 BAM39216.1 - 0.086 12.7 0.6 0.3 11.0 0.0 2.0 2 0 0 2 2 2 0 Rad50 zinc hook motif DUF4379 PF14311.6 BAM39216.1 - 0.11 12.8 1.8 0.22 11.9 1.8 1.6 1 0 0 1 1 1 0 Probable Zinc-ribbon domain TF_Zn_Ribbon PF08271.12 BAM39216.1 - 3.2 7.4 6.8 0.41 10.2 0.3 2.4 3 0 0 3 3 3 0 TFIIB zinc-binding Rrp15p PF07890.12 BAM39219.1 - 0.06 13.7 6.1 0.095 13.0 6.1 1.4 1 1 0 1 1 1 0 Rrp15p TetR_C_23 PF17931.1 BAM39219.1 - 0.15 12.2 1.7 0.2 11.8 1.7 1.3 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain Hydrolase_4 PF12146.8 BAM39220.1 - 5.9e-29 101.0 0.1 5.9e-15 55.2 0.0 3.3 3 0 0 3 3 3 2 Serine aminopeptidase, S33 Peptidase_S9 PF00326.21 BAM39220.1 - 0.0017 17.9 0.4 0.24 10.8 0.0 2.7 3 0 0 3 3 3 2 Prolyl oligopeptidase family Abhydrolase_3 PF07859.13 BAM39220.1 - 0.04 13.8 0.0 0.088 12.7 0.0 1.5 1 0 0 1 1 1 0 alpha/beta hydrolase fold F-box_4 PF15966.5 BAM39220.1 - 0.085 12.7 0.3 0.26 11.2 0.2 1.7 2 0 0 2 2 2 0 F-box Abhydrolase_1 PF00561.20 BAM39220.1 - 0.095 12.3 0.5 4.5 6.8 0.1 2.9 3 0 0 3 3 3 0 alpha/beta hydrolase fold zf-HC5HC2H_2 PF13832.6 BAM39221.1 - 1.1e-11 44.8 23.4 0.00015 21.9 0.5 6.1 6 0 0 6 6 6 4 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 BAM39221.1 - 1.3e-06 28.6 25.2 0.0024 18.1 0.6 5.7 5 0 0 5 5 5 3 PHD-like zinc-binding domain zf-PHD-like PF15446.6 BAM39221.1 - 0.021 14.5 3.5 0.11 12.1 3.5 2.3 1 0 0 1 1 1 0 PHD/FYVE-zinc-finger like domain DASH_Duo1 PF08651.10 BAM39221.1 - 0.25 11.2 6.0 6.8 6.6 0.1 4.1 3 0 0 3 3 3 0 DASH complex subunit Duo1 Sybindin PF04099.12 BAM39222.1 - 3.2e-15 56.3 0.2 3.5e-15 56.2 0.2 1.3 1 1 0 1 1 1 1 Sybindin-like family Sedlin_N PF04628.13 BAM39222.1 - 0.00076 19.6 0.0 0.0014 18.7 0.0 1.5 1 1 0 1 1 1 1 Sedlin, N-terminal conserved region CRCB PF02537.15 BAM39222.1 - 0.07 13.4 0.0 0.16 12.3 0.0 1.7 2 0 0 2 2 2 0 CrcB-like protein, Camphor Resistance (CrcB) MutS_I PF01624.20 BAM39223.1 - 1.3e-05 25.4 0.0 7e-05 23.0 0.0 2.3 1 0 0 1 1 1 1 MutS domain I GIY-YIG PF01541.24 BAM39223.1 - 0.0043 17.3 0.4 0.026 14.8 0.3 2.5 1 1 0 1 1 1 1 GIY-YIG catalytic domain Ribonuc_red_sm PF00268.21 BAM39224.1 - 4.9e-112 373.9 2.7 6.2e-112 373.6 2.7 1.1 1 0 0 1 1 1 1 Ribonucleotide reductase, small chain NMT PF01233.19 BAM39224.1 - 0.0018 18.2 0.2 0.0036 17.2 0.2 1.4 1 0 0 1 1 1 1 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain EF1G PF00647.19 BAM39224.1 - 0.077 13.0 2.5 0.58 10.2 0.1 2.4 2 0 0 2 2 2 0 Elongation factor 1 gamma, conserved domain DUF4744 PF15918.5 BAM39224.1 - 0.19 12.6 0.0 0.39 11.6 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4744) GTP_EFTU PF00009.27 BAM39225.1 - 1.5e-53 181.2 0.0 2e-53 180.8 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 BAM39225.1 - 7.7e-40 135.7 1.3 1.6e-39 134.7 0.4 1.9 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 BAM39225.1 - 2e-12 47.3 0.2 7.8e-12 45.4 0.1 2.1 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 BAM39225.1 - 0.00013 22.1 0.7 0.0056 16.8 0.1 3.0 2 2 0 2 2 2 1 50S ribosome-binding GTPase Semialdhyde_dhC PF02774.18 BAM39225.1 - 0.13 12.3 0.8 0.24 11.4 0.3 1.7 2 0 0 2 2 2 0 Semialdehyde dehydrogenase, dimerisation domain tRNA-synt_1c PF00749.21 BAM39226.1 - 1e-69 234.8 2.0 1.9e-67 227.4 0.8 2.6 2 1 0 2 2 2 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1f PF01921.18 BAM39226.1 - 5e-06 25.7 0.0 0.059 12.3 0.0 2.6 2 0 0 2 2 2 2 tRNA synthetases class I (K) Pkinase PF00069.25 BAM39227.1 - 8.9e-78 261.3 0.0 1e-77 261.1 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM39227.1 - 6.7e-34 117.3 0.0 8.5e-34 117.0 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 BAM39227.1 - 0.0013 17.7 0.0 0.0071 15.3 0.0 1.9 1 1 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 BAM39227.1 - 0.0038 16.6 0.1 0.011 15.0 0.0 1.7 2 1 0 2 2 2 1 Kinase-like Kdo PF06293.14 BAM39227.1 - 0.012 14.9 0.0 0.031 13.6 0.0 1.5 1 1 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 BAM39227.1 - 0.016 15.1 0.1 0.027 14.4 0.0 1.4 1 1 0 1 1 1 0 Phosphotransferase enzyme family Seadorna_VP7 PF07387.11 BAM39227.1 - 0.16 11.0 0.0 0.32 10.0 0.0 1.4 1 0 0 1 1 1 0 Seadornavirus VP7 DnaJ PF00226.31 BAM39228.1 - 4.9e-19 68.2 0.6 4.9e-19 68.2 0.6 1.8 2 0 0 2 2 2 1 DnaJ domain RCC1_2 PF13540.6 BAM39229.1 - 2.4e-26 90.9 19.9 1.5e-09 37.4 0.7 6.8 7 0 0 7 7 7 5 Regulator of chromosome condensation (RCC1) repeat RCC1 PF00415.18 BAM39229.1 - 1.6e-23 83.1 12.4 6.9e-09 36.2 0.2 8.3 8 2 0 8 8 8 4 Regulator of chromosome condensation (RCC1) repeat Kelch_2 PF07646.15 BAM39229.1 - 0.035 14.1 2.0 2 8.5 0.1 4.0 5 0 0 5 5 5 0 Kelch motif Pkinase PF00069.25 BAM39230.1 - 1.9e-14 53.7 0.3 5.1e-06 26.1 0.1 4.4 4 1 0 4 4 4 2 Protein kinase domain Pkinase_Tyr PF07714.17 BAM39230.1 - 4.4e-07 29.4 0.0 0.0055 16.0 0.0 3.5 3 1 0 3 3 3 2 Protein tyrosine kinase DUF3974 PF13120.6 BAM39230.1 - 0.11 12.6 0.2 0.3 11.2 0.2 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3974) UQ_con PF00179.26 BAM39231.1 - 1.2e-49 167.6 0.0 1.7e-49 167.0 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 BAM39231.1 - 4.1e-05 23.8 0.0 7.2e-05 23.0 0.0 1.5 1 0 0 1 1 1 1 RWD domain Prok-E2_B PF14461.6 BAM39231.1 - 4.5e-05 23.2 0.0 6.1e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 Prokaryotic E2 family B UBA_4 PF14555.6 BAM39231.1 - 0.0091 15.8 0.0 0.016 15.0 0.0 1.4 1 0 0 1 1 1 1 UBA-like domain TAP_C PF03943.13 BAM39231.1 - 0.049 13.3 0.0 0.1 12.2 0.0 1.6 1 0 0 1 1 1 0 TAP C-terminal domain Tim17 PF02466.19 BAM39232.1 - 6.6e-15 55.5 4.3 8.9e-15 55.0 4.3 1.2 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family UEV PF05743.13 BAM39233.1 - 4.9e-26 91.0 0.8 1.1e-25 89.9 0.1 1.9 2 0 0 2 2 2 1 UEV domain UQ_con PF00179.26 BAM39233.1 - 2.3e-10 40.3 0.1 6.2e-10 38.9 0.1 1.7 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 BAM39233.1 - 0.01 16.1 0.2 0.042 14.1 0.0 2.1 2 0 0 2 2 2 1 RWD domain Glutaredoxin PF00462.24 BAM39234.1 - 1.9e-15 56.8 0.0 3.9e-15 55.8 0.0 1.5 1 0 0 1 1 1 1 Glutaredoxin DUF3552 PF12072.8 BAM39235.1 - 0.0007 19.1 23.4 0.0007 19.1 23.4 3.9 2 2 2 4 4 4 2 Domain of unknown function (DUF3552) DUF3450 PF11932.8 BAM39235.1 - 0.86 8.9 68.6 0.064 12.6 30.2 3.4 1 1 2 3 3 3 0 Protein of unknown function (DUF3450) Exonuc_VII_L PF02601.15 BAM39235.1 - 1.2 8.6 53.0 4.7 6.7 26.8 2.4 1 1 1 2 2 2 0 Exonuclease VII, large subunit HrpB7 PF09486.10 BAM39235.1 - 5.6 7.3 54.6 1 9.7 8.5 4.7 1 1 3 4 4 4 0 Bacterial type III secretion protein (HrpB7) Sas10 PF09368.10 BAM39238.1 - 1.4e-19 70.3 8.8 1.4e-19 70.3 8.8 4.7 4 1 1 5 5 5 1 Sas10 C-terminal domain Sas10_Utp3 PF04000.15 BAM39238.1 - 6.6e-14 52.3 1.0 6.6e-14 52.3 1.0 4.1 6 1 0 6 6 6 1 Sas10/Utp3/C1D family Filamin PF00630.19 BAM39239.1 - 1.6e-11 44.9 0.0 4.8e-09 37.0 0.0 2.7 2 0 0 2 2 2 2 Filamin/ABP280 repeat Streptin-Immun PF11083.8 BAM39239.1 - 0.0031 17.9 0.8 0.0099 16.3 0.8 2.0 1 0 0 1 1 1 1 Lantibiotic streptin immunity protein ACBP PF00887.19 BAM39243.1 - 7.9e-17 61.3 0.0 1.3e-16 60.6 0.0 1.3 1 0 0 1 1 1 1 Acyl CoA binding protein Ank_2 PF12796.7 BAM39243.1 - 9e-15 55.0 0.0 3.4e-14 53.2 0.0 1.9 1 1 0 1 1 1 1 Ankyrin repeats (3 copies) Ank PF00023.30 BAM39243.1 - 3.3e-14 52.6 0.0 3.7e-06 27.1 0.1 2.7 2 0 0 2 2 2 2 Ankyrin repeat Ank_4 PF13637.6 BAM39243.1 - 2.2e-12 47.2 0.2 3.4e-09 37.1 0.2 3.2 1 1 2 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 BAM39243.1 - 5e-11 41.8 0.1 2.6e-05 24.2 0.0 4.1 4 0 0 4 4 4 2 Ankyrin repeat Ank_5 PF13857.6 BAM39243.1 - 1.3e-10 41.3 0.7 1.1e-05 25.5 0.0 3.1 1 1 1 2 2 2 2 Ankyrin repeats (many copies) FERM_M PF00373.18 BAM39243.1 - 0.042 14.3 0.2 0.45 10.9 0.2 2.3 1 1 0 1 1 1 0 FERM central domain SET PF00856.28 BAM39244.1 - 1.6e-10 41.6 0.0 2.6e-09 37.7 0.0 2.5 2 1 0 2 2 2 1 SET domain Nop PF01798.18 BAM39245.1 - 1.8e-79 266.5 0.1 1.8e-79 266.5 0.1 2.3 2 1 0 2 2 2 1 snoRNA binding domain, fibrillarin NOP5NT PF08156.13 BAM39245.1 - 2.5e-18 66.2 0.0 2.5e-18 66.2 0.0 3.2 4 0 0 4 4 4 1 NOP5NT (NUC127) domain BCDHK_Adom3 PF10436.9 BAM39245.1 - 0.018 14.9 0.3 0.36 10.6 0.0 2.4 2 0 0 2 2 2 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase DUF4487 PF14868.6 BAM39245.1 - 0.14 10.9 0.0 0.24 10.2 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4487) MOZ_SAS PF01853.18 BAM39247.1 - 1.8e-70 236.2 0.3 4e-70 235.1 0.3 1.6 1 0 0 1 1 1 1 MOZ/SAS family zf-MYST PF17772.1 BAM39247.1 - 7.1e-21 73.6 0.3 1.7e-20 72.3 0.3 1.7 1 0 0 1 1 1 1 MYST family zinc finger domain Peptidase_M16_C PF05193.21 BAM39247.1 - 2.8e-13 50.3 0.5 6.2e-05 23.1 0.0 4.6 4 2 0 4 4 4 2 Peptidase M16 inactive domain Tudor-knot PF11717.8 BAM39247.1 - 5e-10 39.1 0.7 1.2e-09 37.9 0.7 1.7 1 0 0 1 1 1 1 RNA binding activity-knot of a chromodomain Peptidase_M16 PF00675.20 BAM39247.1 - 3.5e-08 33.6 0.0 8.8e-07 29.0 0.0 2.7 2 0 0 2 2 2 1 Insulinase (Peptidase family M16) M16C_assoc PF08367.11 BAM39247.1 - 0.1 11.7 2.7 0.082 12.0 0.3 2.0 2 0 0 2 2 2 0 Peptidase M16C associated HSP90 PF00183.18 BAM39248.1 - 4.7e-105 352.4 21.0 6e-102 342.2 16.4 2.1 1 1 1 2 2 2 2 Hsp90 protein HATPase_c_3 PF13589.6 BAM39248.1 - 4.3e-11 42.8 0.0 9.9e-11 41.6 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 BAM39248.1 - 1.4e-07 32.0 0.1 4.7e-07 30.3 0.0 1.9 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HP0268 PF18618.1 BAM39248.1 - 5.8 7.4 12.3 0.25 11.8 0.3 3.2 3 0 0 3 3 3 0 HP0268 Clat_adaptor_s PF01217.20 BAM39249.1 - 2.1e-50 170.4 7.0 2.4e-50 170.2 7.0 1.0 1 0 0 1 1 1 1 Clathrin adaptor complex small chain DUF2590 PF10761.9 BAM39249.1 - 0.0028 17.7 0.0 0.0048 17.0 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF2590) Mlh1_C PF16413.5 BAM39251.1 - 9e-19 67.9 3.6 1.2e-18 67.5 1.1 2.4 1 1 1 2 2 2 1 DNA mismatch repair protein Mlh1 C-terminus DNA_mis_repair PF01119.19 BAM39251.1 - 1.3e-17 63.6 1.5 2.9e-17 62.4 1.5 1.6 1 0 0 1 1 1 1 DNA mismatch repair protein, C-terminal domain HATPase_c_3 PF13589.6 BAM39251.1 - 1.3e-13 51.0 0.1 5e-13 49.1 0.0 2.1 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 BAM39251.1 - 1.6e-05 25.4 0.0 4.6e-05 23.9 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF4724 PF15852.5 BAM39251.1 - 2.6 8.6 6.8 0.7 10.4 2.6 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4724) Ras PF00071.22 BAM39252.1 - 3.9e-49 166.4 0.0 4.7e-49 166.1 0.0 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 BAM39252.1 - 5.5e-31 107.3 0.0 1.1e-30 106.3 0.0 1.4 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 BAM39252.1 - 3e-12 46.3 0.0 4e-12 45.9 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 BAM39252.1 - 2.8e-05 24.2 0.0 4.3e-05 23.6 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase RNA_helicase PF00910.22 BAM39252.1 - 0.00098 19.5 0.0 0.004 17.5 0.0 1.8 1 1 0 1 1 1 1 RNA helicase RsgA_GTPase PF03193.16 BAM39252.1 - 0.0025 17.7 0.0 0.42 10.5 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase Gtr1_RagA PF04670.12 BAM39252.1 - 0.0045 16.4 0.0 0.0059 16.0 0.0 1.3 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region GTP_EFTU PF00009.27 BAM39252.1 - 0.0078 15.8 0.3 0.071 12.6 0.0 1.9 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain AAA_16 PF13191.6 BAM39252.1 - 0.0081 16.6 0.0 0.013 15.9 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain ArgoMid PF16487.5 BAM39252.1 - 0.014 15.7 0.1 0.028 14.7 0.1 1.5 1 1 0 1 1 1 0 Mid domain of argonaute AAA_7 PF12775.7 BAM39252.1 - 0.014 14.9 0.0 0.027 14.0 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region G-alpha PF00503.20 BAM39252.1 - 0.037 13.2 0.3 1.4 8.0 0.2 2.7 2 1 1 3 3 3 0 G-protein alpha subunit NB-ARC PF00931.22 BAM39252.1 - 0.048 12.8 0.0 0.076 12.2 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain NACHT PF05729.12 BAM39252.1 - 0.09 12.7 0.2 0.34 10.8 0.1 1.8 2 0 0 2 2 2 0 NACHT domain Septin PF00735.18 BAM39252.1 - 0.095 12.0 0.0 0.16 11.2 0.0 1.4 1 0 0 1 1 1 0 Septin AAA_5 PF07728.14 BAM39252.1 - 0.12 12.4 0.2 0.42 10.6 0.1 1.9 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) ABC_tran PF00005.27 BAM39252.1 - 0.12 12.9 0.6 0.7 10.4 0.6 2.2 1 1 0 1 1 1 0 ABC transporter TsaE PF02367.17 BAM39252.1 - 0.14 12.1 0.1 0.3 11.1 0.1 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_22 PF13401.6 BAM39252.1 - 0.15 12.3 0.0 0.48 10.7 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 BAM39252.1 - 0.18 11.5 0.1 0.26 11.0 0.1 1.3 1 0 0 1 1 1 0 AAA domain DUF1987 PF09345.10 BAM39253.1 - 0.041 13.5 1.9 4 7.1 0.1 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1987) tRNA-synt_1b PF00579.25 BAM39255.1 - 6.2e-42 143.9 0.1 1e-32 113.6 0.1 2.3 2 1 0 2 2 2 2 tRNA synthetases class I (W and Y) S4 PF01479.25 BAM39255.1 - 0.00023 20.8 0.9 0.00064 19.4 0.3 2.1 2 0 0 2 2 2 1 S4 domain S4_2 PF13275.6 BAM39255.1 - 0.0042 16.9 0.1 0.012 15.4 0.1 1.7 1 0 0 1 1 1 1 S4 domain CRS1_YhbY PF01985.21 BAM39255.1 - 0.13 12.5 0.0 21 5.4 0.0 2.7 2 0 0 2 2 2 0 CRS1 / YhbY (CRM) domain TUDOR PF00567.24 BAM39255.1 - 0.16 12.0 1.4 0.77 9.8 0.3 2.5 3 0 0 3 3 3 0 Tudor domain DUF3273 PF11677.8 BAM39256.1 - 1e-95 320.1 15.2 1.3e-95 319.7 15.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3273) NigD_C PF17415.2 BAM39257.1 - 0.16 12.1 1.8 2 8.5 0.1 2.4 2 0 0 2 2 2 0 NigD-like C-terminal beta sandwich domain Clat_adaptor_s PF01217.20 BAM39258.1 - 4.5e-38 130.4 2.8 5.3e-38 130.1 2.8 1.1 1 0 0 1 1 1 1 Clathrin adaptor complex small chain DEAD PF00270.29 BAM39259.1 - 3.3e-43 147.5 0.2 1.5e-42 145.3 0.1 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM39259.1 - 4e-34 117.3 0.1 1.2e-32 112.6 0.0 2.8 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM39259.1 - 4.3e-06 26.8 0.0 1e-05 25.6 0.0 1.6 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_30 PF13604.6 BAM39259.1 - 0.0032 17.2 0.0 0.0054 16.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 BAM39259.1 - 0.011 16.1 0.0 0.03 14.7 0.0 1.8 1 1 0 1 1 1 0 AAA domain CMS1 PF14617.6 BAM39259.1 - 0.04 13.2 0.1 0.1 11.9 0.1 1.6 2 0 0 2 2 2 0 U3-containing 90S pre-ribosomal complex subunit PhoH PF02562.16 BAM39259.1 - 0.052 13.0 0.0 0.14 11.6 0.0 1.7 2 0 0 2 2 2 0 PhoH-like protein Helicase_RecD PF05127.14 BAM39259.1 - 0.07 13.0 0.0 0.14 12.0 0.0 1.5 1 0 0 1 1 1 0 Helicase DUF2075 PF09848.9 BAM39259.1 - 0.09 12.0 0.1 0.32 10.2 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_11 PF13086.6 BAM39259.1 - 0.1 12.4 0.1 0.42 10.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain DUF1864 PF08933.11 BAM39259.1 - 0.15 10.7 0.0 0.23 10.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1864) F-box PF00646.33 BAM39262.1 - 9.7e-05 22.2 0.5 0.0025 17.6 0.2 2.6 2 0 0 2 2 2 1 F-box domain F-box-like PF12937.7 BAM39262.1 - 0.0026 17.6 0.6 0.0054 16.6 0.1 1.8 2 0 0 2 2 2 1 F-box-like CAF1C_H4-bd PF12265.8 BAM39264.1 - 2e-19 69.6 0.0 9.3e-18 64.3 0.0 2.7 2 1 0 2 2 2 1 Histone-binding protein RBBP4 or subunit C of CAF1 complex WD40 PF00400.32 BAM39264.1 - 1.3e-06 29.0 12.2 0.54 11.2 1.1 5.9 5 1 0 5 5 5 2 WD domain, G-beta repeat Varsurf_PPLC PF03490.13 BAM39264.1 - 0.065 13.2 0.0 7.2 6.6 0.0 2.6 2 0 0 2 2 2 0 Variant-surface-glycoprotein phospholipase C SUKH_6 PF14568.6 BAM39264.1 - 0.54 10.7 3.5 9.5 6.7 1.3 2.9 3 0 0 3 3 3 0 SMI1-KNR4 cell-wall PQQ_3 PF13570.6 BAM39264.1 - 0.85 10.2 5.2 2.3 8.8 0.3 3.5 4 0 0 4 4 4 0 PQQ-like domain PQQ PF01011.21 BAM39264.1 - 1.3 9.0 3.8 5.8 7.0 0.2 3.1 3 0 0 3 3 3 0 PQQ enzyme repeat Macoilin PF09726.9 BAM39264.1 - 6.8 5.1 13.4 9.4 4.7 13.4 1.1 1 0 0 1 1 1 0 Macoilin family Tmemb_cc2 PF10267.9 BAM39264.1 - 9.1 5.3 8.1 12 4.9 8.1 1.2 1 0 0 1 1 1 0 Predicted transmembrane and coiled-coil 2 protein Myosin_head PF00063.21 BAM39265.1 - 9.3e-195 648.7 15.8 1.3e-194 648.2 15.8 1.2 1 0 0 1 1 1 1 Myosin head (motor domain) IQ PF00612.27 BAM39265.1 - 3.3e-11 41.9 16.0 0.00017 21.0 0.4 5.6 5 0 0 5 5 5 3 IQ calmodulin-binding motif AAA_16 PF13191.6 BAM39265.1 - 5e-07 30.3 0.0 0.036 14.5 0.0 2.9 3 0 0 3 3 2 2 AAA ATPase domain AAA_22 PF13401.6 BAM39265.1 - 2.3e-06 27.9 0.0 0.073 13.4 0.0 3.0 2 0 0 2 2 2 2 AAA domain WD40 PF00400.32 BAM39265.1 - 0.00011 22.9 2.7 4.6 8.3 0.0 6.1 7 0 0 7 7 6 1 WD domain, G-beta repeat RNA_helicase PF00910.22 BAM39265.1 - 0.0005 20.4 0.0 1 9.8 0.0 3.2 2 0 0 2 2 2 2 RNA helicase DUF815 PF05673.13 BAM39265.1 - 0.00056 19.2 0.0 0.039 13.1 0.0 2.6 2 0 0 2 2 2 1 Protein of unknown function (DUF815) AAA_7 PF12775.7 BAM39265.1 - 0.00081 18.9 0.1 1.6 8.2 0.0 3.4 3 0 0 3 3 3 2 P-loop containing dynein motor region AAA_18 PF13238.6 BAM39265.1 - 0.0033 18.0 0.0 6.3 7.3 0.0 3.0 2 0 0 2 2 2 2 AAA domain Zeta_toxin PF06414.12 BAM39265.1 - 0.019 14.2 0.0 3 7.1 0.0 3.0 3 0 0 3 3 3 0 Zeta toxin AAA_33 PF13671.6 BAM39265.1 - 0.027 14.7 0.1 1.5 8.9 0.0 3.2 3 0 0 3 3 3 0 AAA domain ABC_tran PF00005.27 BAM39265.1 - 0.046 14.2 0.2 16 6.0 0.0 3.7 3 0 0 3 3 3 0 ABC transporter AAA_29 PF13555.6 BAM39265.1 - 0.047 13.4 0.3 7.9 6.3 0.0 2.6 2 0 0 2 2 2 0 P-loop containing region of AAA domain TsaE PF02367.17 BAM39265.1 - 0.05 13.6 0.0 4.9 7.2 0.0 3.1 3 0 0 3 3 3 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE T2SSE PF00437.20 BAM39265.1 - 0.068 12.2 0.0 12 4.8 0.0 2.5 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_5 PF07728.14 BAM39265.1 - 0.097 12.7 0.0 10 6.1 0.0 3.0 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) Myosin_N PF02736.19 BAM39265.1 - 0.15 11.9 0.2 0.38 10.6 0.2 1.7 1 0 0 1 1 1 0 Myosin N-terminal SH3-like domain PI-PLC-X PF00388.19 BAM39267.1 - 2e-38 131.3 0.0 3.8e-38 130.3 0.0 1.5 1 0 0 1 1 1 1 Phosphatidylinositol-specific phospholipase C, X domain PI-PLC-Y PF00387.19 BAM39267.1 - 6.5e-24 84.5 0.0 1.9e-23 83.0 0.0 1.7 1 0 0 1 1 1 1 Phosphatidylinositol-specific phospholipase C, Y domain C2 PF00168.30 BAM39267.1 - 4.3e-10 39.8 0.0 1.1e-09 38.4 0.0 1.6 1 0 0 1 1 1 1 C2 domain Mcp5_PH PF12814.7 BAM39267.1 - 0.0021 18.1 0.0 0.011 15.8 0.0 2.2 2 0 0 2 2 2 1 Meiotic cell cortex C-terminal pleckstrin homology FAST_1 PF06743.15 BAM39268.1 - 0.0061 16.5 0.8 2.3 8.2 0.0 4.5 5 1 1 6 6 6 1 FAST kinase-like protein, subdomain 1 Utp14 PF04615.13 BAM39269.1 - 0.026 13.1 29.9 0.048 12.2 29.9 1.5 1 1 0 1 1 1 0 Utp14 protein Utp14 PF04615.13 BAM39270.1 - 5.8e-26 91.3 52.9 1.6e-18 66.7 31.3 2.2 1 1 1 2 2 2 2 Utp14 protein Myb_DNA-binding PF00249.31 BAM39271.1 - 7.1e-10 38.9 0.1 2e-09 37.5 0.1 1.8 1 0 0 1 1 1 1 Myb-like DNA-binding domain ZZ PF00569.17 BAM39271.1 - 5.8e-05 22.8 9.8 0.00011 21.9 9.8 1.4 1 0 0 1 1 1 1 Zinc finger, ZZ type Myb_DNA-bind_6 PF13921.6 BAM39271.1 - 0.021 15.1 0.0 0.067 13.5 0.0 1.9 1 0 0 1 1 1 0 Myb-like DNA-binding domain Baculo_IE-1 PF05290.11 BAM39271.1 - 0.089 12.7 9.0 0.13 12.3 7.5 2.0 2 0 0 2 2 2 0 Baculovirus immediate-early protein (IE-0) AP2 PF00847.20 BAM39272.1 - 7.2e-08 32.6 0.1 1.4e-07 31.6 0.1 1.5 1 0 0 1 1 1 1 AP2 domain DUF1011 PF06237.12 BAM39273.1 - 0.0084 16.4 20.8 0.32 11.3 3.6 4.2 3 0 0 3 3 3 2 Protein of unknown function (DUF1011) Ribosomal_S8 PF00410.19 BAM39273.1 - 0.092 12.7 1.0 0.29 11.1 1.0 1.9 1 0 0 1 1 1 0 Ribosomal protein S8 Wza_C PF18412.1 BAM39273.1 - 0.22 11.3 2.2 26 4.7 0.0 3.8 3 0 0 3 3 3 0 Outer-membrane lipoprotein Wza C-terminal domain DUF4828 PF16110.5 BAM39273.1 - 0.82 10.2 7.3 48 4.5 0.6 3.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4828) DUF2408 PF10303.9 BAM39273.1 - 8.5 6.9 20.6 2 9.0 1.1 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF2408) Wza_C PF18412.1 BAM39274.1 - 0.049 13.4 0.4 20 5.0 0.0 3.6 2 0 0 2 2 2 0 Outer-membrane lipoprotein Wza C-terminal domain DUF2408 PF10303.9 BAM39274.1 - 0.06 13.9 13.2 0.23 12.0 1.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2408) Ribosomal_S8 PF00410.19 BAM39274.1 - 0.16 12.0 2.1 0.46 10.4 2.1 1.9 1 0 0 1 1 1 0 Ribosomal protein S8 RuBisCO_large PF00016.20 BAM39274.1 - 0.25 10.5 0.0 99 2.0 0.0 3.1 3 0 0 3 3 3 0 Ribulose bisphosphate carboxylase large chain, catalytic domain DUF2551 PF10826.8 BAM39274.1 - 0.83 9.9 5.2 36 4.7 0.1 4.0 4 0 0 4 4 4 0 Protein of unknown function (DUF2551) P2 PF07194.11 BAM39274.1 - 1.5 8.9 5.3 3.3 7.8 0.7 2.9 2 0 0 2 2 2 0 P2 response regulator binding domain DUF1011 PF06237.12 BAM39274.1 - 5.8 7.3 27.4 0.19 12.1 3.2 3.4 4 0 0 4 4 4 0 Protein of unknown function (DUF1011) Pkinase PF00069.25 BAM39276.1 - 7.1e-57 192.8 0.0 1.1e-56 192.2 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM39276.1 - 1.2e-25 90.3 0.5 6.8e-25 87.8 0.5 2.0 1 1 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 BAM39276.1 - 0.00028 19.9 0.0 0.00044 19.3 0.0 1.3 1 0 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 BAM39276.1 - 0.0035 16.9 0.1 0.0058 16.3 0.1 1.3 1 0 0 1 1 1 1 RIO1 family Kdo PF06293.14 BAM39276.1 - 0.034 13.5 0.0 0.054 12.8 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 BAM39276.1 - 0.16 11.9 0.0 0.28 11.1 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family SPRY PF00622.28 BAM39278.1 - 4.4e-19 68.8 0.7 8.4e-19 67.9 0.7 1.5 1 0 0 1 1 1 1 SPRY domain CLTH PF10607.9 BAM39278.1 - 9.2e-15 54.8 2.1 1.6e-14 54.0 2.1 1.3 1 0 0 1 1 1 1 CTLH/CRA C-terminal to LisH motif domain LisH PF08513.11 BAM39278.1 - 0.0029 17.5 0.1 0.0079 16.1 0.1 1.7 1 0 0 1 1 1 1 LisH CST-I PF06002.12 BAM39278.1 - 0.039 13.7 4.0 0.029 14.1 1.8 1.9 1 1 1 2 2 2 0 Alpha-2,3-sialyltransferase (CST-I) L27_1 PF09058.10 BAM39278.1 - 0.14 12.1 0.1 0.42 10.6 0.0 1.8 2 0 0 2 2 2 0 L27_1 zf-C2HE PF16278.5 BAM39279.1 - 0.53 10.8 6.7 0.18 12.3 2.6 2.6 2 1 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger Ank_2 PF12796.7 BAM39280.1 - 3e-32 111.0 5.0 1.7e-14 54.2 0.1 3.3 2 1 2 4 4 4 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 BAM39280.1 - 6.3e-24 84.0 4.6 1.9e-09 37.9 0.1 4.4 1 1 3 4 4 4 4 Ankyrin repeats (many copies) Bromodomain PF00439.25 BAM39280.1 - 1.7e-18 66.4 0.0 4.3e-18 65.2 0.0 1.6 1 0 0 1 1 1 1 Bromodomain Ank_3 PF13606.6 BAM39280.1 - 7.5e-18 62.8 0.1 0.00048 20.4 0.0 4.9 5 0 0 5 5 5 3 Ankyrin repeat Ank_5 PF13857.6 BAM39280.1 - 4.4e-16 58.7 4.2 1.1e-07 31.9 0.1 3.9 2 1 3 5 5 5 3 Ankyrin repeats (many copies) Ank PF00023.30 BAM39280.1 - 1.1e-13 50.9 0.2 0.00054 20.3 0.0 5.5 5 0 0 5 5 5 3 Ankyrin repeat PMM PF03332.13 BAM39281.1 - 1.1e-77 260.8 1.0 1.3e-77 260.5 1.0 1.0 1 0 0 1 1 1 1 Eukaryotic phosphomannomutase Hydrolase_3 PF08282.12 BAM39281.1 - 5.2e-11 42.8 0.0 9.5e-11 41.9 0.0 1.4 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 BAM39281.1 - 5.4e-05 22.8 0.0 0.0014 18.2 0.0 2.0 2 0 0 2 2 2 1 Sucrose-6F-phosphate phosphohydrolase HAD_2 PF13419.6 BAM39281.1 - 0.0093 16.1 0.8 0.033 14.3 0.8 2.0 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Yip1 PF04893.17 BAM39283.1 - 0.00012 21.9 12.6 0.00021 21.1 12.6 1.4 1 0 0 1 1 1 1 Yip1 domain Gcd10p PF04189.13 BAM39284.1 - 2.1e-34 119.0 6.1 2e-23 83.0 3.0 2.2 1 1 1 2 2 2 2 Gcd10p family UPF0020 PF01170.18 BAM39284.1 - 0.01 15.5 0.4 0.5 10.0 0.0 2.2 2 0 0 2 2 2 0 Putative RNA methylase family UPF0020 MTS PF05175.14 BAM39284.1 - 0.058 12.9 0.0 0.1 12.1 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase small domain Prefoldin_3 PF13758.6 BAM39284.1 - 0.076 13.1 0.3 0.18 11.9 0.3 1.7 1 0 0 1 1 1 0 Prefoldin subunit Kei1 PF08552.11 BAM39284.1 - 0.18 11.7 0.6 0.58 10.0 0.0 1.9 2 0 0 2 2 2 0 Inositolphosphorylceramide synthase subunit Kei1 TRAP_alpha PF03896.16 BAM39284.1 - 1.5 8.0 4.7 0.18 11.0 0.1 1.7 2 0 0 2 2 2 0 Translocon-associated protein (TRAP), alpha subunit Ribosomal_L11 PF00298.19 BAM39285.1 - 2.9e-21 75.7 0.1 7.7e-21 74.4 0.0 1.7 2 0 0 2 2 2 1 Ribosomal protein L11, RNA binding domain Ribosomal_L11_N PF03946.14 BAM39285.1 - 1.6e-19 69.4 0.1 3.6e-19 68.3 0.1 1.6 2 0 0 2 2 2 1 Ribosomal protein L11, N-terminal domain Actin PF00022.19 BAM39286.1 - 1.4e-82 277.5 0.0 9.5e-82 274.8 0.0 1.8 1 1 0 1 1 1 1 Actin Es2 PF09751.9 BAM39287.1 - 1.3e-19 71.3 15.7 1.7e-08 34.7 10.0 3.9 1 1 1 2 2 2 2 Nuclear protein Es2 Methyltr_RsmB-F PF01189.17 BAM39288.1 - 5.3e-28 98.0 0.0 5.3e-21 75.2 0.0 2.2 1 1 0 2 2 2 2 16S rRNA methyltransferase RsmB/F FtsJ PF01728.19 BAM39288.1 - 0.018 15.1 0.0 0.046 13.8 0.0 1.6 1 1 0 1 1 1 0 FtsJ-like methyltransferase HemY_N PF07219.13 BAM39290.1 - 0.19 12.0 0.6 0.28 11.4 0.6 1.2 1 0 0 1 1 1 0 HemY protein N-terminus Vps35 PF03635.17 BAM39291.1 - 9.8e-174 579.8 11.8 1.6e-172 575.8 11.8 1.9 1 1 0 1 1 1 1 Vacuolar protein sorting-associated protein 35 PRP1_N PF06424.12 BAM39294.1 - 2.1e-31 109.3 13.5 2.1e-31 109.3 13.5 3.7 3 1 0 3 3 3 1 PRP1 splicing factor, N-terminal TPR_14 PF13428.6 BAM39294.1 - 1.9e-26 90.5 8.4 0.01 16.6 0.2 13.3 6 3 7 13 13 13 5 Tetratricopeptide repeat TPR_19 PF14559.6 BAM39294.1 - 9.7e-24 83.7 4.0 0.00037 20.9 0.1 9.5 10 0 0 10 10 9 4 Tetratricopeptide repeat TPR_2 PF07719.17 BAM39294.1 - 7.2e-09 35.1 16.8 0.32 11.2 0.6 10.0 14 0 0 14 14 12 2 Tetratricopeptide repeat TPR_16 PF13432.6 BAM39294.1 - 2.9e-08 34.2 0.0 1.5 9.5 1.7 6.7 7 1 2 9 9 8 2 Tetratricopeptide repeat TPR_17 PF13431.6 BAM39294.1 - 1e-05 25.5 2.1 11 6.6 0.0 7.5 7 1 0 8 8 6 0 Tetratricopeptide repeat TPR_1 PF00515.28 BAM39294.1 - 8.9e-05 22.1 5.5 0.25 11.2 0.4 6.1 7 0 0 7 7 6 1 Tetratricopeptide repeat TPR_11 PF13414.6 BAM39294.1 - 0.00011 21.9 11.8 2.2 8.0 0.1 7.8 9 0 0 9 9 9 1 TPR repeat ANAPC3 PF12895.7 BAM39294.1 - 0.00018 21.7 4.0 0.19 12.0 0.3 4.9 5 0 0 5 5 5 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_15 PF13429.6 BAM39294.1 - 0.00031 20.1 15.1 0.0091 15.2 2.8 5.5 4 3 1 5 5 5 1 Tetratricopeptide repeat TPR_8 PF13181.6 BAM39294.1 - 0.00035 20.5 17.1 13 6.3 0.0 9.9 13 0 0 13 13 12 0 Tetratricopeptide repeat TPR_12 PF13424.6 BAM39294.1 - 0.014 15.7 11.5 8.3 6.8 0.4 7.0 7 1 2 9 9 7 0 Tetratricopeptide repeat TPR_9 PF13371.6 BAM39294.1 - 0.036 14.2 0.4 1.4 9.1 0.1 3.3 3 0 0 3 3 2 0 Tetratricopeptide repeat TPR_21 PF09976.9 BAM39294.1 - 0.041 13.6 13.6 1.1 9.0 0.5 5.0 3 1 1 4 4 4 0 Tetratricopeptide repeat-like domain Fis1_TPR_C PF14853.6 BAM39294.1 - 0.053 13.6 3.5 0.67 10.1 0.2 3.7 4 0 0 4 4 4 0 Fis1 C-terminal tetratricopeptide repeat Exonuc_VII_S PF02609.16 BAM39294.1 - 1.1 9.3 8.8 31 4.7 0.6 5.5 5 0 0 5 5 5 0 Exonuclease VII small subunit CCDC-167 PF15188.6 BAM39294.1 - 1.2 9.5 4.5 21 5.5 1.5 2.9 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 167 TPR_10 PF13374.6 BAM39294.1 - 3.4 7.7 4.6 27 4.8 0.8 4.3 5 0 0 5 5 5 0 Tetratricopeptide repeat TPR_6 PF13174.6 BAM39294.1 - 4.4 8.2 8.7 32 5.4 0.0 6.4 8 0 0 8 8 7 0 Tetratricopeptide repeat G-patch PF01585.23 BAM39295.1 - 4.2e-12 45.7 0.1 9.5e-12 44.6 0.1 1.6 1 0 0 1 1 1 1 G-patch domain G-patch_2 PF12656.7 BAM39295.1 - 0.023 14.8 0.3 0.051 13.7 0.0 1.7 2 0 0 2 2 2 0 G-patch domain zf-Tim10_DDP PF02953.15 BAM39297.1 - 1.1e-18 66.7 1.5 1.3e-18 66.3 1.5 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger FAST_1 PF06743.15 BAM39298.1 - 0.0064 16.4 4.1 2.6 8.1 0.3 4.9 3 1 2 5 5 5 3 FAST kinase-like protein, subdomain 1 Ribosomal_L1 PF00687.21 BAM39299.1 - 1.2e-43 149.2 6.3 1.9e-43 148.6 6.1 1.4 1 1 0 1 1 1 1 Ribosomal protein L1p/L10e family Asp PF00026.23 BAM39300.1 - 4.1e-44 151.3 0.2 1.1e-43 149.9 0.2 1.7 1 1 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 BAM39300.1 - 0.0021 18.3 0.1 0.38 11.0 0.0 3.1 2 1 0 2 2 2 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 BAM39300.1 - 0.089 12.6 0.0 0.16 11.7 0.0 1.4 1 0 0 1 1 1 0 Xylanase inhibitor C-terminal UQ_con PF00179.26 BAM39301.1 - 4.4e-37 126.9 0.0 5.3e-37 126.6 0.0 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 BAM39301.1 - 0.048 13.4 0.0 0.064 13.0 0.0 1.3 1 0 0 1 1 1 0 Prokaryotic E2 family B SNF2_N PF00176.23 BAM39302.1 - 8.9e-54 182.5 0.0 1.4e-53 181.8 0.0 1.2 1 0 0 1 1 1 1 SNF2 family N-terminal domain Helicase_C PF00271.31 BAM39302.1 - 1.4e-15 57.6 0.0 5.2e-15 55.7 0.0 2.0 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM39302.1 - 3e-09 37.1 0.0 1.7e-08 34.7 0.0 2.1 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit HDA2-3 PF11496.8 BAM39302.1 - 1.2e-05 24.6 0.1 0.00011 21.5 0.1 2.4 1 1 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 DEAD PF00270.29 BAM39302.1 - 0.00027 20.7 0.0 0.00045 20.0 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase ERCC3_RAD25_C PF16203.5 BAM39302.1 - 0.0063 15.8 0.2 0.013 14.7 0.0 1.6 2 0 0 2 2 2 1 ERCC3/RAD25/XPB C-terminal helicase DUF2075 PF09848.9 BAM39302.1 - 0.049 12.9 0.0 0.22 10.7 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) LSM PF01423.22 BAM39303.1 - 5.1e-19 67.7 0.0 5.8e-19 67.5 0.0 1.1 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 BAM39303.1 - 0.031 14.4 0.0 0.036 14.2 0.0 1.1 1 0 0 1 1 1 0 Ataxin 2 SM domain Ufd2P_core PF10408.9 BAM39305.1 - 4.9e-131 438.4 0.0 6.4e-113 378.5 0.0 2.3 2 1 0 2 2 2 2 Ubiquitin elongating factor core U-box PF04564.15 BAM39305.1 - 2.3e-23 82.1 0.5 6.5e-23 80.7 0.5 1.8 1 0 0 1 1 1 1 U-box domain Mucin PF01456.17 BAM39305.1 - 0.029 14.4 22.3 0.084 12.9 1.3 2.4 2 0 0 2 2 2 0 Mucin-like glycoprotein Phage_TAC_12 PF12363.8 BAM39305.1 - 0.12 12.7 0.7 1.3 9.4 0.0 2.7 3 0 0 3 3 3 0 Phage tail assembly chaperone protein, TAC RNA_pol_Rpb1_5 PF04998.17 BAM39306.1 - 1.6e-84 283.5 0.0 3.8e-84 282.3 0.0 1.7 1 1 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_2 PF00623.20 BAM39306.1 - 5e-62 209.0 0.1 1.5e-61 207.4 0.1 1.9 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 BAM39306.1 - 3.1e-29 101.9 0.0 7.9e-29 100.6 0.0 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_1 PF04997.12 BAM39306.1 - 3.5e-17 62.7 10.1 3.4e-16 59.5 4.0 2.6 2 0 0 2 2 2 2 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_4 PF05000.17 BAM39306.1 - 4.2e-14 52.4 0.2 2.4e-13 50.0 0.0 2.5 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 4 Sporozoite_P67 PF05642.11 BAM39306.1 - 1.2 7.1 8.7 2.9 5.9 8.7 1.6 1 0 0 1 1 1 0 Sporozoite P67 surface antigen BUD22 PF09073.10 BAM39306.1 - 2.2 7.5 12.3 4.5 6.5 12.3 1.4 1 0 0 1 1 1 0 BUD22 ArfGap PF01412.18 BAM39307.1 - 5.2e-29 100.7 0.0 1.2e-28 99.5 0.0 1.6 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf CoaE PF01121.20 BAM39308.1 - 3.3e-34 118.1 0.0 4.3e-34 117.7 0.0 1.1 1 0 0 1 1 1 1 Dephospho-CoA kinase AAA_18 PF13238.6 BAM39308.1 - 1.7e-06 28.6 0.4 4.5e-06 27.2 0.3 1.7 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 BAM39308.1 - 0.0005 20.3 0.0 0.12 12.6 0.0 2.5 2 1 0 2 2 2 2 AAA domain AAA_28 PF13521.6 BAM39308.1 - 0.0014 18.9 0.0 0.0033 17.7 0.0 1.5 1 1 0 1 1 1 1 AAA domain dNK PF01712.19 BAM39308.1 - 0.019 14.9 0.1 0.061 13.2 0.0 1.8 2 0 0 2 2 2 0 Deoxynucleoside kinase SKI PF01202.22 BAM39308.1 - 0.052 13.7 0.0 0.099 12.8 0.0 1.5 1 0 0 1 1 1 0 Shikimate kinase AAA_29 PF13555.6 BAM39308.1 - 0.15 11.9 0.1 0.29 10.9 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain zf-CCCH PF00642.24 BAM39309.1 - 2.1e-09 37.1 2.7 3.6e-09 36.3 2.7 1.4 1 0 0 1 1 1 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-RING_5 PF14634.6 BAM39309.1 - 9.4e-06 25.5 10.8 1.7e-05 24.6 10.8 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf_CCCH_4 PF18345.1 BAM39309.1 - 1.6e-05 24.7 4.4 3.3e-05 23.8 4.4 1.5 1 0 0 1 1 1 1 Zinc finger domain zf-RING_UBOX PF13445.6 BAM39309.1 - 4.8e-05 23.3 4.4 0.0001 22.3 4.4 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_10 PF16685.5 BAM39309.1 - 0.00045 20.3 6.8 0.00045 20.3 6.8 1.8 2 0 0 2 2 2 1 zinc RING finger of MSL2 zf-C3HC4_3 PF13920.6 BAM39309.1 - 0.00047 20.0 9.0 0.00089 19.1 9.0 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 BAM39309.1 - 0.00061 19.6 6.2 0.0012 18.7 6.2 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_2 PF13923.6 BAM39309.1 - 0.00065 19.5 11.0 0.0015 18.4 11.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 BAM39309.1 - 0.0031 17.4 13.0 0.0076 16.1 13.0 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-CCCH_4 PF18044.1 BAM39309.1 - 0.0041 16.9 2.8 0.0041 16.9 2.8 2.1 2 0 0 2 2 2 1 CCCH-type zinc finger zf-rbx1 PF12678.7 BAM39309.1 - 0.047 14.0 8.4 0.1 12.9 8.4 1.6 1 0 0 1 1 1 0 RING-H2 zinc finger domain zf-RING_2 PF13639.6 BAM39309.1 - 0.068 13.5 11.6 0.16 12.3 11.6 1.7 1 0 0 1 1 1 0 Ring finger domain DUF3091 PF11291.8 BAM39309.1 - 0.079 13.1 0.1 0.079 13.1 0.1 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3091) zf-P11 PF03854.14 BAM39309.1 - 0.36 10.5 11.3 0.8 9.4 11.3 1.5 1 0 0 1 1 1 0 P-11 zinc finger CNDH2_C PF16858.5 BAM39309.1 - 1 9.2 12.0 0.033 14.1 5.6 1.6 2 0 0 2 2 2 0 Condensin II complex subunit CAP-H2 or CNDH2, C-term FANCI_HD2 PF14680.6 BAM39309.1 - 1.4 8.1 7.4 2.6 7.2 7.4 1.4 1 0 0 1 1 1 0 FANCI helical domain 2 Pes-10 PF07149.11 BAM39309.1 - 1.6 7.7 12.7 2.6 7.0 12.7 1.3 1 0 0 1 1 1 0 Pes-10 Cwf_Cwc_15 PF04889.12 BAM39309.1 - 1.6 8.4 28.9 0.046 13.5 18.8 2.1 2 0 0 2 2 2 0 Cwf15/Cwc15 cell cycle control protein RRN3 PF05327.11 BAM39309.1 - 1.8 7.0 9.1 2.8 6.4 9.1 1.2 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 zf-C3HC4_4 PF15227.6 BAM39309.1 - 2 8.6 13.1 2.8 8.2 10.9 2.3 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING Slu7 PF11708.8 BAM39309.1 - 4 7.1 22.9 0.11 12.2 15.1 1.9 2 0 0 2 2 2 0 Pre-mRNA splicing Prp18-interacting factor DDHD PF02862.17 BAM39309.1 - 9.4 6.3 9.7 11 6.1 5.9 2.1 1 1 0 2 2 2 0 DDHD domain HypA PF01155.19 BAM39309.1 - 10 6.2 8.4 1.1e+02 2.9 8.4 2.2 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-CCCH PF00642.24 BAM39310.1 - 0.00094 19.0 0.4 0.00094 19.0 0.4 4.1 4 0 0 4 4 4 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 BAM39310.1 - 0.0045 17.0 0.6 0.0045 17.0 0.6 4.0 4 0 0 4 4 4 1 Zinc finger domain zf-CCCH_4 PF18044.1 BAM39310.1 - 0.0046 16.7 15.3 0.0051 16.6 0.2 3.9 4 0 0 4 4 4 2 CCCH-type zinc finger Pro_isomerase PF00160.21 BAM39311.1 - 1.4e-51 174.9 0.1 3e-51 173.8 0.1 1.5 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD WD40 PF00400.32 BAM39311.1 - 0.00033 21.4 2.0 0.037 14.9 0.6 3.7 3 0 0 3 3 3 1 WD domain, G-beta repeat VID27 PF08553.10 BAM39311.1 - 0.0037 16.4 0.1 0.018 14.1 0.0 2.1 3 0 0 3 3 3 1 VID27 C-terminal WD40-like domain ANAPC4_WD40 PF12894.7 BAM39311.1 - 0.0059 16.9 0.1 0.92 9.8 0.0 3.6 3 1 0 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 BAM39311.1 - 0.013 14.4 0.0 0.45 9.4 0.0 2.4 2 0 0 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein 5_3_exonuc PF01367.20 BAM39312.1 - 0.13 12.9 0.2 0.41 11.3 0.2 1.8 1 0 0 1 1 1 0 5'-3' exonuclease, C-terminal SAM fold TauE PF01925.19 BAM39313.1 - 4.1e-18 65.9 20.2 8.9e-10 38.6 7.6 3.7 3 1 0 3 3 3 3 Sulfite exporter TauE/SafE Mem_trans PF03547.18 BAM39313.1 - 0.00038 19.0 0.5 0.0029 16.0 0.1 2.2 2 0 0 2 2 2 1 Membrane transport protein EphA2_TM PF14575.6 BAM39313.1 - 0.16 12.8 4.2 0.18 12.7 0.0 3.0 3 0 0 3 3 3 0 Ephrin type-A receptor 2 transmembrane domain SID-1_RNA_chan PF13965.6 BAM39313.1 - 0.21 10.0 5.2 0.62 8.4 3.3 2.4 2 1 0 2 2 2 0 dsRNA-gated channel SID-1 DUF4834 PF16118.5 BAM39313.1 - 0.22 12.5 0.1 0.22 12.5 0.1 3.4 3 1 0 3 3 3 0 Domain of unknown function (DUF4834) OAD_gamma PF04277.13 BAM39313.1 - 0.32 11.6 0.0 0.32 11.6 0.0 3.5 3 0 0 3 3 3 0 Oxaloacetate decarboxylase, gamma chain Ly49 PF08391.10 BAM39313.1 - 1.3 9.4 7.3 0.31 11.4 0.5 2.5 2 0 0 2 2 2 0 Ly49-like protein, N-terminal region RP-C_C PF11800.8 BAM39313.1 - 2.5 8.2 4.9 16 5.5 0.2 2.2 2 0 0 2 2 2 0 Replication protein C C-terminal region tRNA-synt_2 PF00152.20 BAM39314.1 - 6.3e-64 216.0 3.9 7.9e-64 215.7 3.9 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 BAM39314.1 - 3.2e-09 36.6 0.0 6.4e-09 35.7 0.0 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain dNK PF01712.19 BAM39314.1 - 0.0032 17.3 2.9 0.83 9.5 0.7 2.5 2 0 0 2 2 2 2 Deoxynucleoside kinase tRNA-synt_2d PF01409.20 BAM39314.1 - 0.0043 16.6 0.1 0.36 10.3 0.0 2.6 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) Phage_T7_tail PF03906.14 BAM39314.1 - 0.0084 15.8 0.0 0.017 14.8 0.0 1.5 1 0 0 1 1 1 1 Phage T7 tail fibre protein Fis1_TPR_C PF14853.6 BAM39314.1 - 0.035 14.2 0.0 0.12 12.4 0.0 1.9 1 0 0 1 1 1 0 Fis1 C-terminal tetratricopeptide repeat DUF2247 PF10004.9 BAM39314.1 - 0.083 12.7 3.8 0.2 11.4 3.8 1.7 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2247) HeLo PF14479.6 BAM39314.1 - 0.1 12.4 0.0 0.17 11.7 0.0 1.3 1 0 0 1 1 1 0 Prion-inhibition and propagation PI3_PI4_kinase PF00454.27 BAM39315.1 - 3.5e-32 112.2 0.2 2.8e-24 86.3 0.1 3.3 2 1 1 3 3 3 2 Phosphatidylinositol 3- and 4-kinase PI3Ka PF00613.20 BAM39315.1 - 1.1e-09 37.9 0.4 2.5e-09 36.8 0.4 1.5 1 0 0 1 1 1 1 Phosphoinositide 3-kinase family, accessory domain (PIK domain) SGIII PF15467.6 BAM39315.1 - 0.00017 21.0 1.5 0.00017 21.0 1.5 2.2 2 0 0 2 2 2 1 Secretogranin-3 Nse4_C PF08743.10 BAM39316.1 - 0.00032 20.9 0.1 0.0016 18.7 0.0 2.1 2 0 0 2 2 2 1 Nse4 C-terminal AvrPto PF11592.8 BAM39316.1 - 0.063 13.3 0.0 4.4 7.4 0.0 2.4 2 0 0 2 2 2 0 Central core of the bacterial effector protein AvrPto DEAD PF00270.29 BAM39317.1 - 2e-44 151.5 0.3 3.5e-44 150.7 0.3 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM39317.1 - 1.1e-24 87.0 0.7 6.4e-22 78.0 0.3 3.6 2 1 0 2 2 2 1 Helicase conserved C-terminal domain DUF4217 PF13959.6 BAM39317.1 - 2.5e-12 46.8 0.3 6.1e-12 45.6 0.3 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) ResIII PF04851.15 BAM39317.1 - 4.8e-06 26.7 0.0 1.2e-05 25.4 0.0 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit CMS1 PF14617.6 BAM39317.1 - 0.026 13.9 0.1 0.081 12.3 0.1 1.8 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit EMG1 PF03587.14 BAM39317.1 - 0.05 13.3 0.6 1.5 8.5 0.1 2.6 2 0 0 2 2 2 0 EMG1/NEP1 methyltransferase AAA_19 PF13245.6 BAM39317.1 - 0.052 13.9 0.1 0.13 12.6 0.0 1.8 2 1 0 2 2 2 0 AAA domain AAA_22 PF13401.6 BAM39317.1 - 0.13 12.5 0.2 1.4 9.1 0.0 2.5 2 0 0 2 2 2 0 AAA domain Peptidase_S46 PF10459.9 BAM39317.1 - 0.94 8.0 3.9 0.39 9.3 1.6 1.4 2 0 0 2 2 2 0 Peptidase S46 Pkinase PF00069.25 BAM39319.1 - 3.4e-10 39.8 7.9 1.3e-06 28.0 0.5 3.6 2 1 1 3 3 3 3 Protein kinase domain Pkinase_Tyr PF07714.17 BAM39319.1 - 1.5e-06 27.7 2.3 4.9e-05 22.7 0.1 2.7 3 0 0 3 3 3 2 Protein tyrosine kinase Kinase-like PF14531.6 BAM39319.1 - 0.002 17.5 0.1 0.64 9.3 0.0 2.5 2 0 0 2 2 2 2 Kinase-like Sas10_Utp3 PF04000.15 BAM39319.1 - 0.37 11.5 2.4 11 6.7 0.1 3.0 2 1 1 3 3 3 0 Sas10/Utp3/C1D family RRM_1 PF00076.22 BAM39321.1 - 1.6e-11 43.9 0.3 2.1e-06 27.5 0.1 2.9 2 1 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) BRAP2 PF07576.12 BAM39321.1 - 0.059 13.6 0.0 0.12 12.6 0.0 1.5 1 0 0 1 1 1 0 BRCA1-associated protein 2 SRP9-21 PF05486.12 BAM39322.1 - 0.00029 21.2 0.3 0.45 11.0 0.0 2.3 1 1 1 2 2 2 2 Signal recognition particle 9 kDa protein (SRP9) NMD3 PF04981.13 BAM39323.1 - 5.6e-62 209.4 13.0 1.1e-61 208.4 13.0 1.5 1 0 0 1 1 1 1 NMD3 family DZR PF12773.7 BAM39323.1 - 0.31 11.1 10.5 0.093 12.8 1.4 2.8 3 0 0 3 3 3 0 Double zinc ribbon C1_1 PF00130.22 BAM39323.1 - 7.5 6.5 14.4 42 4.1 9.2 3.3 2 1 0 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Rpr2 PF04032.16 BAM39323.1 - 7.7 6.9 9.3 0.68 10.3 0.6 2.7 2 0 0 2 2 2 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Brix PF04427.18 BAM39324.1 - 5.1e-28 98.5 0.8 1e-27 97.5 0.8 1.4 1 0 0 1 1 1 1 Brix domain FtsJ PF01728.19 BAM39325.1 - 1.5e-54 184.7 0.0 3.8e-54 183.5 0.0 1.7 1 1 0 1 1 1 1 FtsJ-like methyltransferase SICA_alpha PF12887.7 BAM39325.1 - 0.052 13.4 0.0 0.33 10.8 0.1 2.1 2 0 0 2 2 2 0 SICA extracellular alpha domain HALZ PF02183.18 BAM39325.1 - 0.13 12.6 0.1 0.43 10.8 0.1 1.9 1 0 0 1 1 1 0 Homeobox associated leucine zipper Adaptin_N PF01602.20 BAM39326.1 - 8.5e-60 202.8 13.9 1.3e-59 202.2 13.9 1.2 1 0 0 1 1 1 1 Adaptin N terminal region Cnd1 PF12717.7 BAM39326.1 - 1.1e-22 80.8 4.0 2.3e-21 76.5 0.9 2.8 2 0 0 2 2 2 1 non-SMC mitotic condensation complex subunit 1 B2-adapt-app_C PF09066.10 BAM39326.1 - 1.6e-05 25.0 0.2 8.7e-05 22.6 0.1 2.3 2 1 0 2 2 2 1 Beta2-adaptin appendage, C-terminal sub-domain DUF4230 PF14014.6 BAM39326.1 - 0.024 14.9 0.3 0.055 13.7 0.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4230) HEAT_2 PF13646.6 BAM39326.1 - 0.083 13.3 0.0 2.1 8.8 0.0 2.5 2 0 0 2 2 2 0 HEAT repeats zf-RING_5 PF14634.6 BAM39328.1 - 9.9e-06 25.4 4.8 2.2e-05 24.3 4.8 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 BAM39328.1 - 1.1e-05 25.4 2.9 2.4e-05 24.3 2.9 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_4 PF15227.6 BAM39328.1 - 2.1e-05 24.6 2.1 4.8e-05 23.4 2.1 1.6 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING Prok-RING_4 PF14447.6 BAM39328.1 - 3.1e-05 23.7 5.1 7.5e-05 22.5 5.1 1.6 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_3 PF13920.6 BAM39328.1 - 0.00051 19.8 4.2 0.00051 19.8 4.2 1.7 2 0 0 2 2 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 BAM39328.1 - 0.0039 17.5 5.1 0.011 16.1 5.1 1.8 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 BAM39328.1 - 0.0043 16.9 5.9 0.01 15.7 5.9 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_4 PF14570.6 BAM39328.1 - 0.039 13.7 2.7 0.1 12.4 2.7 1.7 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-C3HC4_2 PF13923.6 BAM39328.1 - 0.064 13.1 5.3 0.15 12.0 5.3 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_10 PF16685.5 BAM39328.1 - 0.086 13.0 4.7 0.25 11.5 4.7 1.8 1 0 0 1 1 1 0 zinc RING finger of MSL2 SOG2 PF10428.9 BAM39328.1 - 0.16 11.2 8.1 0.14 11.3 0.2 2.7 2 0 0 2 2 2 0 RAM signalling pathway protein zf-C3HC4_3 PF13920.6 BAM39329.1 - 0.0018 18.1 11.3 0.0018 18.1 11.3 3.2 3 1 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) DUF72 PF01904.18 BAM39329.1 - 0.011 15.9 0.1 0.057 13.5 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function DUF72 Flavodoxin_1 PF00258.25 BAM39330.1 - 6.5e-15 55.6 0.0 1.2e-14 54.7 0.0 1.5 1 0 0 1 1 1 1 Flavodoxin FAD_binding_1 PF00667.20 BAM39330.1 - 8.2e-15 55.0 0.1 3.5e-14 52.9 0.0 2.0 2 1 0 2 2 2 1 FAD binding domain zf-Tim10_DDP PF02953.15 BAM39331.1 - 0.02 14.5 1.2 3.7 7.3 0.1 2.6 2 0 0 2 2 2 0 Tim10/DDP family zinc finger Ole-e-6 PF09253.10 BAM39331.1 - 0.18 11.8 2.6 1.8 8.6 0.2 2.4 2 0 0 2 2 2 0 Pollen allergen ole e 6 LMBR1 PF04791.16 BAM39331.1 - 0.27 10.1 1.5 0.31 9.9 1.5 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein TetR_C_12 PF16914.5 BAM39332.1 - 0.1 12.7 0.0 0.4 10.8 0.0 1.9 2 0 0 2 2 2 0 Bacterial transcriptional repressor C-terminal XRN_N PF03159.18 BAM39333.1 - 5.5e-66 222.4 0.1 9.1e-66 221.7 0.1 1.3 1 0 0 1 1 1 1 XRN 5'-3' exonuclease N-terminus XRN_M PF17846.1 BAM39333.1 - 3.2e-26 92.3 3.4 3.8e-16 59.1 0.9 2.3 1 1 0 2 2 2 2 Xrn1 helical domain UQ_con PF00179.26 BAM39334.1 - 1.3e-22 79.9 0.0 3e-22 78.8 0.0 1.6 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Nup54 PF13874.6 BAM39334.1 - 3.4e-06 27.2 4.6 6.6e-06 26.3 3.5 2.1 1 1 1 2 2 1 1 Nucleoporin complex subunit 54 DUF2408 PF10303.9 BAM39334.1 - 0.00027 21.5 6.9 0.0078 16.8 3.0 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF2408) MscS_porin PF12795.7 BAM39334.1 - 0.002 17.7 1.8 0.002 17.7 1.8 2.2 1 1 1 2 2 2 1 Mechanosensitive ion channel porin domain APG6_N PF17675.1 BAM39334.1 - 0.0057 17.2 4.8 0.0057 17.2 4.8 2.0 2 0 0 2 2 2 1 Apg6 coiled-coil region FbpA PF05833.11 BAM39334.1 - 0.023 13.5 8.6 0.0055 15.5 4.3 1.8 2 0 0 2 2 2 0 Fibronectin-binding protein A N-terminus (FbpA) DUF2730 PF10805.8 BAM39334.1 - 0.051 13.7 3.2 3.2 7.9 1.0 3.7 2 1 1 4 4 4 0 Protein of unknown function (DUF2730) TolA_bind_tri PF16331.5 BAM39334.1 - 0.096 12.8 3.7 0.24 11.5 2.0 2.6 2 1 0 2 2 1 0 TolA binding protein trimerisation DUF948 PF06103.11 BAM39334.1 - 0.13 12.5 1.9 0.41 10.9 1.0 2.3 2 0 0 2 2 1 0 Bacterial protein of unknown function (DUF948) Sec34 PF04136.15 BAM39334.1 - 0.15 11.9 13.4 0.041 13.7 6.1 2.8 2 1 1 3 3 3 0 Sec34-like family Prominin PF05478.11 BAM39334.1 - 0.19 9.7 10.4 0.21 9.5 6.3 2.1 1 1 0 2 2 2 0 Prominin Laminin_II PF06009.12 BAM39334.1 - 0.34 10.9 12.1 0.46 10.5 5.1 2.9 2 1 1 3 3 3 0 Laminin Domain II DUF3450 PF11932.8 BAM39334.1 - 0.53 9.6 8.1 0.13 11.5 0.9 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3450) Myb_DNA-bind_4 PF13837.6 BAM39334.1 - 0.56 10.6 4.9 2.4 8.6 0.1 3.0 2 1 0 2 2 2 0 Myb/SANT-like DNA-binding domain GldM_N PF12081.8 BAM39334.1 - 0.6 10.2 9.3 2.9 7.9 8.5 2.3 1 1 1 2 2 2 0 GldM N-terminal domain DegS PF05384.11 BAM39334.1 - 0.8 9.2 7.2 0.33 10.4 3.6 2.1 2 1 0 2 2 2 0 Sensor protein DegS V_ATPase_I PF01496.19 BAM39334.1 - 0.92 7.3 7.2 1.7 6.4 7.2 1.4 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family Exonuc_VII_L PF02601.15 BAM39334.1 - 0.99 8.9 10.6 5.8 6.4 10.5 2.0 1 1 0 1 1 1 0 Exonuclease VII, large subunit DivIVA PF05103.13 BAM39334.1 - 1.1 9.3 6.7 0.89 9.6 4.0 2.4 2 1 0 2 2 1 0 DivIVA protein Fez1 PF06818.15 BAM39334.1 - 1.4 9.4 10.5 2.9 8.3 10.5 1.6 1 1 0 1 1 1 0 Fez1 SKA2 PF16740.5 BAM39334.1 - 1.4 8.8 10.8 0.1 12.4 1.6 3.0 2 1 0 3 3 3 0 Spindle and kinetochore-associated protein 2 Syntaxin-6_N PF09177.11 BAM39334.1 - 1.4 9.5 5.6 1.2 9.7 1.6 2.6 1 1 0 2 2 2 0 Syntaxin 6, N-terminal DUF1664 PF07889.12 BAM39334.1 - 2.1 8.4 4.9 3.9 7.5 1.2 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) STAT_alpha PF01017.20 BAM39334.1 - 2.1 8.2 8.0 0.7 9.8 2.7 2.3 1 1 1 2 2 2 0 STAT protein, all-alpha domain YabA PF06156.13 BAM39334.1 - 2.3 8.9 9.8 0.5 11.0 3.5 2.7 3 0 0 3 3 3 0 Initiation control protein YabA PHM7_cyt PF14703.6 BAM39334.1 - 2.4 8.4 5.9 6.4 7.0 5.7 1.9 1 1 1 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter RNA_binding PF01877.17 BAM39334.1 - 4 7.7 9.4 0.48 10.7 1.5 2.8 2 1 1 3 3 3 0 RNA binding FlaC_arch PF05377.11 BAM39334.1 - 6.3 7.3 10.1 21 5.6 1.8 4.0 3 1 1 4 4 4 0 Flagella accessory protein C (FlaC) YtxH PF12732.7 BAM39334.1 - 7.6 7.1 7.5 8e+02 0.7 7.5 3.3 1 1 0 1 1 1 0 YtxH-like protein Occludin_ELL PF07303.13 BAM39334.1 - 9 7.1 13.1 11 6.9 3.4 3.3 3 0 0 3 3 3 0 Occludin homology domain AAA PF00004.29 BAM39335.1 - 1.2e-43 148.8 0.0 3.4e-43 147.2 0.0 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Prot_ATP_ID_OB PF16450.5 BAM39335.1 - 1.8e-10 40.6 0.0 3.7e-10 39.6 0.0 1.5 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_lid_3 PF17862.1 BAM39335.1 - 1.1e-09 37.9 0.4 2.5e-09 36.8 0.4 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_22 PF13401.6 BAM39335.1 - 2e-06 28.1 0.2 0.0093 16.2 0.0 2.9 1 1 1 2 2 2 2 AAA domain AAA_2 PF07724.14 BAM39335.1 - 3.3e-06 27.3 0.0 1.1e-05 25.7 0.0 1.8 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 BAM39335.1 - 1.7e-05 24.8 0.1 0.00011 22.1 0.1 2.4 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 BAM39335.1 - 2.3e-05 24.2 0.0 4.9e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain DUF815 PF05673.13 BAM39335.1 - 4.2e-05 22.8 0.0 8.1e-05 21.9 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_16 PF13191.6 BAM39335.1 - 5.6e-05 23.6 0.1 0.0015 19.0 0.0 2.5 1 1 0 2 2 2 1 AAA ATPase domain AAA_14 PF13173.6 BAM39335.1 - 0.00012 22.1 0.1 0.011 15.8 0.0 2.4 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 BAM39335.1 - 0.0014 18.4 0.0 0.0052 16.5 0.0 1.9 2 0 0 2 2 2 1 IstB-like ATP binding protein RNA_helicase PF00910.22 BAM39335.1 - 0.0036 17.7 0.0 0.0098 16.3 0.0 1.8 1 0 0 1 1 1 1 RNA helicase AAA_18 PF13238.6 BAM39335.1 - 0.0038 17.8 0.0 0.0079 16.7 0.0 1.6 1 0 0 1 1 1 1 AAA domain TIP49 PF06068.13 BAM39335.1 - 0.0045 16.2 0.0 0.0099 15.1 0.0 1.5 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_33 PF13671.6 BAM39335.1 - 0.0048 17.1 0.0 0.0088 16.2 0.0 1.5 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 BAM39335.1 - 0.0067 16.4 1.4 0.32 10.9 0.1 3.0 3 1 0 3 3 3 1 NTPase AAA_28 PF13521.6 BAM39335.1 - 0.0076 16.5 0.1 0.016 15.5 0.0 1.6 2 0 0 2 2 1 1 AAA domain Mg_chelatase PF01078.21 BAM39335.1 - 0.015 14.7 0.1 0.032 13.6 0.1 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI PhoH PF02562.16 BAM39335.1 - 0.02 14.3 0.2 0.12 11.8 0.1 2.0 2 0 0 2 2 2 0 PhoH-like protein NACHT PF05729.12 BAM39335.1 - 0.027 14.4 0.2 0.46 10.4 0.0 2.4 2 1 1 3 3 2 0 NACHT domain AAA_3 PF07726.11 BAM39335.1 - 0.029 14.2 0.1 0.1 12.4 0.0 2.0 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_7 PF12775.7 BAM39335.1 - 0.047 13.2 0.1 0.14 11.6 0.1 1.7 1 1 0 1 1 1 0 P-loop containing dynein motor region AAA_17 PF13207.6 BAM39335.1 - 0.072 13.5 0.0 0.2 12.1 0.0 1.8 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 BAM39335.1 - 0.075 12.9 1.2 1.8 8.4 0.0 2.9 3 0 0 3 3 3 0 ATPase domain predominantly from Archaea AAA_24 PF13479.6 BAM39335.1 - 0.079 12.7 0.3 0.079 12.7 0.3 2.2 2 1 0 2 2 2 0 AAA domain Bac_DnaA PF00308.18 BAM39335.1 - 0.096 12.5 0.4 0.47 10.3 0.4 2.0 1 1 0 1 1 1 0 Bacterial dnaA protein AAA_30 PF13604.6 BAM39335.1 - 0.11 12.2 0.2 0.28 10.9 0.2 1.7 1 1 0 1 1 1 0 AAA domain Sigma54_activat PF00158.26 BAM39335.1 - 0.12 12.1 0.1 0.81 9.4 0.0 2.2 2 1 0 2 2 2 0 Sigma-54 interaction domain AAA_25 PF13481.6 BAM39335.1 - 0.12 11.9 0.0 0.34 10.5 0.0 1.7 2 0 0 2 2 2 0 AAA domain Parvo_NS1 PF01057.17 BAM39335.1 - 0.15 11.2 0.0 0.28 10.2 0.0 1.4 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 TsaE PF02367.17 BAM39335.1 - 0.15 12.1 0.0 0.27 11.2 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATG16 PF08614.11 BAM39336.1 - 0.003 17.8 4.0 0.0035 17.6 4.0 1.0 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) Use1 PF09753.9 BAM39336.1 - 0.0074 16.0 1.1 0.0078 16.0 1.1 1.0 1 0 0 1 1 1 1 Membrane fusion protein Use1 Renin_r PF07850.14 BAM39336.1 - 0.041 14.5 0.2 0.044 14.4 0.2 1.2 1 0 0 1 1 1 0 Renin receptor-like protein KxDL PF10241.9 BAM39336.1 - 0.049 13.9 3.0 0.055 13.7 3.0 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein MctB PF11382.8 BAM39336.1 - 0.13 11.9 1.2 0.15 11.7 1.2 1.1 1 0 0 1 1 1 0 Copper transport outer membrane protein, MctB DUF5383 PF17355.2 BAM39336.1 - 0.28 11.6 2.0 0.47 10.8 1.7 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5383) BRX_assoc PF16627.5 BAM39337.1 - 0.18 12.0 2.1 0.41 10.8 2.1 1.6 1 0 0 1 1 1 0 Unstructured region between BRX_N and BRX domain mTERF PF02536.14 BAM39339.1 - 7.7e-19 67.8 0.1 3.8e-18 65.5 0.0 2.1 3 0 0 3 3 3 1 mTERF IF3_N PF05198.16 BAM39339.1 - 9.7e-09 35.4 0.2 5.6e-08 32.9 0.0 2.2 2 0 0 2 2 2 1 Translation initiation factor IF-3, N-terminal domain IF3_C PF00707.22 BAM39339.1 - 0.00098 19.0 0.3 0.0031 17.5 0.0 2.0 2 0 0 2 2 2 1 Translation initiation factor IF-3, C-terminal domain Terminase_4 PF05119.12 BAM39339.1 - 0.17 12.4 0.0 0.56 10.7 0.0 1.8 1 0 0 1 1 1 0 Phage terminase, small subunit XPG_I PF00867.18 BAM39340.1 - 1.4e-09 38.1 0.1 3e-09 37.1 0.1 1.6 1 0 0 1 1 1 1 XPG I-region KH_1 PF00013.29 BAM39341.1 - 4.7e-06 26.3 0.2 0.02 14.7 0.0 2.8 3 0 0 3 3 3 2 KH domain Xpo1 PF08389.12 BAM39341.1 - 0.027 14.5 0.1 0.047 13.7 0.1 1.3 1 0 0 1 1 1 0 Exportin 1-like protein AATF-Che1 PF13339.6 BAM39341.1 - 0.11 13.2 1.1 0.21 12.3 1.1 1.4 1 0 0 1 1 1 0 Apoptosis antagonizing transcription factor KilA-N PF04383.13 BAM39341.1 - 0.24 11.3 7.1 3.3 7.6 0.1 2.3 1 1 1 2 2 2 0 KilA-N domain SRP54 PF00448.22 BAM39342.1 - 3.1e-77 258.7 0.0 6e-77 257.7 0.0 1.5 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 BAM39342.1 - 9.8e-30 103.1 0.2 9.8e-30 103.1 0.2 2.6 2 0 0 2 2 1 1 Signal peptide binding domain SRP54_N PF02881.19 BAM39342.1 - 5.8e-18 64.9 2.8 1.7e-17 63.4 2.8 1.9 1 0 0 1 1 1 1 SRP54-type protein, helical bundle domain cobW PF02492.19 BAM39342.1 - 1.1e-05 25.1 0.0 4.5e-05 23.1 0.0 2.0 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 BAM39342.1 - 0.00023 21.6 0.0 0.00066 20.1 0.0 1.8 2 0 0 2 2 2 1 AAA ATPase domain AAA_33 PF13671.6 BAM39342.1 - 0.00023 21.3 0.0 0.0019 18.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain MeaB PF03308.16 BAM39342.1 - 0.00028 20.0 0.0 0.0012 17.9 0.0 2.0 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB Zeta_toxin PF06414.12 BAM39342.1 - 0.0015 17.9 0.0 0.0055 16.0 0.0 1.8 1 1 0 2 2 2 1 Zeta toxin AAA_30 PF13604.6 BAM39342.1 - 0.0024 17.6 0.2 0.011 15.5 0.0 2.0 2 0 0 2 2 2 1 AAA domain Fe-ADH PF00465.19 BAM39342.1 - 0.0031 16.4 0.1 0.0072 15.2 0.0 1.7 2 0 0 2 2 2 1 Iron-containing alcohol dehydrogenase APS_kinase PF01583.20 BAM39342.1 - 0.01 15.8 0.1 0.036 13.9 0.0 1.9 2 0 0 2 2 2 1 Adenylylsulphate kinase ResIII PF04851.15 BAM39342.1 - 0.01 15.8 0.2 0.053 13.5 0.1 2.3 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit CbiA PF01656.23 BAM39342.1 - 0.011 15.8 0.0 0.038 14.0 0.0 1.9 2 1 0 2 2 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_22 PF13401.6 BAM39342.1 - 0.013 15.8 0.0 0.059 13.6 0.0 2.3 2 0 0 2 2 1 0 AAA domain ATPase PF06745.13 BAM39342.1 - 0.018 14.4 0.0 0.098 12.0 0.0 2.2 2 0 0 2 2 2 0 KaiC Methyltransf_24 PF13578.6 BAM39342.1 - 0.056 14.5 0.0 0.11 13.5 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain PduV-EutP PF10662.9 BAM39342.1 - 0.063 13.0 0.3 7.5 6.3 0.0 2.8 3 0 0 3 3 2 0 Ethanolamine utilisation - propanediol utilisation AAA_17 PF13207.6 BAM39342.1 - 0.064 13.7 0.1 0.064 13.7 0.1 3.0 3 1 0 3 3 3 0 AAA domain AAA_24 PF13479.6 BAM39342.1 - 0.083 12.6 0.1 0.23 11.2 0.0 1.8 2 0 0 2 2 2 0 AAA domain SirA PF10747.9 BAM39342.1 - 0.083 13.2 0.6 0.25 11.6 0.5 1.8 2 0 0 2 2 1 0 Sporulation inhibitor of replication protein SirA VirE PF05272.11 BAM39342.1 - 0.093 12.5 0.1 0.17 11.6 0.1 1.4 1 0 0 1 1 1 0 Virulence-associated protein E AAA_25 PF13481.6 BAM39342.1 - 0.12 11.9 0.0 0.94 9.0 0.0 2.3 2 0 0 2 2 2 0 AAA domain LPD14 PF18827.1 BAM39342.1 - 0.13 12.5 0.9 0.35 11.1 0.1 2.2 2 0 0 2 2 2 0 Large polyvalent protein-associated domain 14 MMR_HSR1 PF01926.23 BAM39342.1 - 0.18 11.9 1.6 1.1 9.3 0.2 2.8 2 1 0 2 2 2 0 50S ribosome-binding GTPase Forkhead_N PF08430.12 BAM39342.1 - 4.4 7.9 11.7 2.3 8.8 9.6 1.6 2 0 0 2 2 1 0 Forkhead N-terminal region EIF_2_alpha PF07541.12 BAM39343.1 - 1e-26 93.3 0.0 2.1e-26 92.3 0.0 1.6 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 BAM39343.1 - 5e-10 39.6 0.3 1.1e-09 38.5 0.3 1.5 1 0 0 1 1 1 1 S1 RNA binding domain EcKinase PF02958.20 BAM39343.1 - 0.034 13.5 0.2 0.091 12.1 0.0 1.8 2 0 0 2 2 2 0 Ecdysteroid kinase DNA_pol3_a_NII PF11490.8 BAM39343.1 - 0.076 12.9 2.1 0.2 11.6 2.1 1.7 1 0 0 1 1 1 0 DNA polymerase III polC-type N-terminus II MIS13 PF08202.11 BAM39343.1 - 0.095 12.0 4.9 0.18 11.1 4.9 1.4 1 0 0 1 1 1 0 Mis12-Mtw1 protein family TPR_12 PF13424.6 BAM39344.1 - 2e-20 72.8 4.1 3e-10 40.2 0.1 2.4 2 1 0 2 2 2 2 Tetratricopeptide repeat TPR_10 PF13374.6 BAM39344.1 - 1.3e-09 37.6 2.8 0.0014 18.4 0.6 4.0 4 0 0 4 4 4 3 Tetratricopeptide repeat TPR_8 PF13181.6 BAM39344.1 - 1.8e-09 37.1 15.1 0.00082 19.4 0.1 4.6 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_2 PF07719.17 BAM39344.1 - 1.4e-08 34.2 10.3 0.0015 18.5 2.3 4.4 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_7 PF13176.6 BAM39344.1 - 5.7e-08 32.3 3.9 0.00048 20.0 0.6 3.1 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 BAM39344.1 - 3.8e-07 29.7 12.3 0.005 16.6 2.2 4.5 5 0 0 5 5 5 2 Tetratricopeptide repeat MIT PF04212.18 BAM39344.1 - 0.0011 18.9 1.9 0.003 17.6 0.4 2.2 2 0 0 2 2 2 1 MIT (microtubule interacting and transport) domain TPR_MalT PF17874.1 BAM39344.1 - 0.0039 16.6 0.0 0.0051 16.2 0.0 1.1 1 0 0 1 1 1 1 MalT-like TPR region TPR_17 PF13431.6 BAM39344.1 - 0.0046 17.3 0.1 15 6.2 0.0 3.9 4 0 0 4 4 4 0 Tetratricopeptide repeat DUF2225 PF09986.9 BAM39344.1 - 0.087 12.5 3.4 0.17 11.6 0.2 2.1 1 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2225) SRP_TPR_like PF17004.5 BAM39344.1 - 0.19 11.7 3.9 1.2 9.1 0.4 2.5 2 1 0 3 3 3 0 Putative TPR-like repeat TPR_6 PF13174.6 BAM39344.1 - 0.2 12.4 1.6 25 5.8 0.1 3.6 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_3 PF07720.12 BAM39344.1 - 0.24 11.4 3.1 0.33 11.0 0.4 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_11 PF13414.6 BAM39344.1 - 3 7.6 9.2 25 4.7 0.0 3.8 4 0 0 4 4 4 0 TPR repeat G-patch PF01585.23 BAM39346.1 - 5.7e-15 54.9 2.1 1e-14 54.1 2.1 1.4 1 0 0 1 1 1 1 G-patch domain RRM_1 PF00076.22 BAM39346.1 - 2.2e-05 24.2 0.1 0.065 13.1 0.0 2.5 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) G-patch_2 PF12656.7 BAM39346.1 - 0.023 14.8 1.7 0.063 13.4 1.7 1.7 1 0 0 1 1 1 0 G-patch domain Gar1 PF04410.14 BAM39347.1 - 2.5e-19 69.6 0.8 4.8e-19 68.6 0.8 1.4 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region TFIIS_C PF01096.18 BAM39349.1 - 5.4e-12 45.4 0.8 5.4e-12 45.4 0.8 3.0 4 0 0 4 4 4 1 Transcription factor S-II (TFIIS) Ribosomal_L44 PF00935.19 BAM39349.1 - 0.005 17.3 3.9 0.02 15.3 0.1 2.9 3 0 0 3 3 3 1 Ribosomal protein L44 Baculo_LEF5_C PF11792.8 BAM39349.1 - 0.0085 15.7 2.1 0.0085 15.7 2.1 2.3 3 1 0 3 3 3 1 Baculoviridae late expression factor 5 C-terminal domain DZR PF12773.7 BAM39349.1 - 0.012 15.6 6.0 0.47 10.5 0.9 3.0 2 2 0 2 2 2 0 Double zinc ribbon HypA PF01155.19 BAM39349.1 - 0.019 15.0 3.2 1.2 9.2 0.2 2.4 2 0 0 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_15 PF17032.5 BAM39349.1 - 0.18 12.6 13.3 4.1 8.2 2.2 3.3 1 1 0 2 2 2 0 zinc-ribbon family DUF3268 PF11672.8 BAM39349.1 - 0.41 11.0 7.6 7.2 7.0 1.6 2.6 2 0 0 2 2 2 0 zinc-finger-containing domain PHD PF00628.29 BAM39349.1 - 0.47 10.4 9.8 0.68 9.9 1.0 3.2 3 0 0 3 3 3 0 PHD-finger E7 PF00527.18 BAM39349.1 - 0.6 10.4 6.4 5.1 7.4 0.0 3.2 2 1 1 3 3 3 0 E7 protein, Early protein zf-Mss51 PF13824.6 BAM39349.1 - 0.61 10.2 11.9 2.3 8.4 0.5 3.7 2 1 2 4 4 4 0 Zinc-finger of mitochondrial splicing suppressor 51 zf-CSL PF05207.13 BAM39349.1 - 0.66 9.7 12.9 0.88 9.3 0.3 3.5 3 1 1 4 4 4 0 CSL zinc finger DNA_RNApol_7kD PF03604.13 BAM39349.1 - 1.2 8.8 13.8 4 7.2 0.2 4.3 4 0 0 4 4 4 0 DNA directed RNA polymerase, 7 kDa subunit zf-Sec23_Sec24 PF04810.15 BAM39349.1 - 1.6 8.9 0.0 1.6 8.9 0.0 3.4 4 0 0 4 4 3 0 Sec23/Sec24 zinc finger DUF951 PF06107.11 BAM39349.1 - 2.2 8.3 6.5 31 4.6 0.2 3.6 4 0 0 4 4 4 0 Bacterial protein of unknown function (DUF951) Zn-ribbon_8 PF09723.10 BAM39349.1 - 5.6 7.2 15.7 13 6.0 4.1 4.5 4 1 0 4 4 4 0 Zinc ribbon domain PTH2 PF01981.16 BAM39350.1 - 4.3e-44 149.5 0.0 5.5e-44 149.2 0.0 1.1 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 UCR_14kD PF02271.16 BAM39351.1 - 1.6e-18 66.5 0.1 2.5e-18 65.9 0.1 1.3 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase complex 14kD subunit DUF2452 PF10504.9 BAM39351.1 - 0.23 10.9 0.0 0.32 10.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2452) Hydrolase_3 PF08282.12 BAM39352.1 - 7e-32 111.1 0.0 1.1e-31 110.5 0.0 1.2 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 BAM39352.1 - 0.023 15.0 0.0 0.048 14.0 0.0 1.6 1 1 0 1 1 1 0 haloacid dehalogenase-like hydrolase S6PP PF05116.13 BAM39352.1 - 0.11 12.1 0.0 1.2 8.7 0.0 2.1 2 0 0 2 2 2 0 Sucrose-6F-phosphate phosphohydrolase HAD_2 PF13419.6 BAM39352.1 - 0.15 12.2 0.2 0.61 10.1 0.0 2.2 3 0 0 3 3 3 0 Haloacid dehalogenase-like hydrolase GMP_synt_C PF00958.22 BAM39353.1 - 9.4e-29 99.3 0.0 7.3e-28 96.5 0.0 2.3 3 0 0 3 3 3 1 GMP synthase C terminal domain GATase PF00117.28 BAM39353.1 - 7.9e-17 61.6 0.0 1.4e-16 60.9 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase class-I NAD_synthase PF02540.17 BAM39353.1 - 4.7e-09 35.7 0.0 1.5e-06 27.5 0.0 2.3 2 0 0 2 2 2 2 NAD synthase tRNA_Me_trans PF03054.16 BAM39353.1 - 0.039 12.7 0.1 0.092 11.5 0.1 1.6 2 0 0 2 2 2 0 tRNA methyl transferase Thioredoxin PF00085.20 BAM39354.1 - 1.2e-37 128.1 0.1 6.5e-26 90.3 0.0 2.4 2 0 0 2 2 2 2 Thioredoxin Thioredoxin_2 PF13098.6 BAM39354.1 - 8.7e-06 26.1 3.7 0.23 11.9 0.1 5.2 3 2 1 4 4 4 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 BAM39354.1 - 1.2e-05 25.6 2.4 4.5 7.7 0.0 4.9 3 2 1 4 4 4 2 Thioredoxin-like Thioredoxin_4 PF13462.6 BAM39354.1 - 0.043 14.0 3.0 1.7 8.8 0.1 2.9 3 1 0 3 3 3 0 Thioredoxin Thioredoxin_7 PF13899.6 BAM39354.1 - 0.088 13.0 1.2 0.36 11.0 0.1 2.4 2 1 0 2 2 2 0 Thioredoxin-like Thioredoxin_3 PF13192.6 BAM39354.1 - 0.13 12.3 3.6 7.1 6.8 0.0 3.3 4 0 0 4 4 4 0 Thioredoxin domain Thioredoxin_5 PF13743.6 BAM39354.1 - 0.46 10.1 2.7 19 4.9 0.1 3.5 4 1 1 5 5 5 0 Thioredoxin RRM_1 PF00076.22 BAM39356.1 - 3.8e-31 106.7 0.0 1.7e-17 63.0 0.1 2.4 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 BAM39356.1 - 5.4e-06 26.4 0.1 0.15 12.1 0.1 2.8 3 0 0 3 3 3 2 RNA binding motif Nup35_RRM_2 PF14605.6 BAM39356.1 - 0.0015 18.5 0.0 0.0029 17.6 0.0 1.5 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif RRM_7 PF16367.5 BAM39356.1 - 0.006 16.7 0.1 0.022 14.9 0.1 2.0 2 1 0 2 2 2 1 RNA recognition motif RlmM_FDX PF18125.1 BAM39356.1 - 0.16 12.5 0.0 0.46 11.0 0.0 1.7 1 0 0 1 1 1 0 RlmM ferredoxin-like domain Plasmodium_Vir PF05795.11 BAM39356.1 - 0.36 10.2 9.5 0.86 9.0 0.2 2.2 2 0 0 2 2 2 0 Plasmodium vivax Vir protein SNF2_N PF00176.23 BAM39357.1 - 3.6e-60 203.5 0.6 3.6e-60 203.5 0.6 2.7 3 1 0 3 3 3 1 SNF2 family N-terminal domain Chromo PF00385.24 BAM39357.1 - 1.9e-23 82.1 2.8 1.2e-11 44.4 0.2 2.9 2 0 0 2 2 2 2 Chromo (CHRromatin Organisation MOdifier) domain Helicase_C PF00271.31 BAM39357.1 - 5.5e-21 75.0 0.0 1.8e-20 73.4 0.0 2.0 1 0 0 1 1 1 1 Helicase conserved C-terminal domain HDA2-3 PF11496.8 BAM39357.1 - 3.9e-11 42.7 0.3 1.3e-10 41.0 0.3 1.9 1 0 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 ResIII PF04851.15 BAM39357.1 - 3.2e-10 40.3 0.0 1.4e-08 34.9 0.0 3.1 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.29 BAM39357.1 - 9.6e-08 32.0 0.0 8.1e-07 29.0 0.0 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase Chromo_shadow PF01393.19 BAM39357.1 - 0.01 15.9 0.1 0.71 10.0 0.0 2.6 2 0 0 2 2 2 0 Chromo shadow domain Mtf2_C PF14061.6 BAM39357.1 - 0.056 13.6 0.2 2.4 8.4 0.1 2.6 2 0 0 2 2 2 0 Polycomb-like MTF2 factor 2 Bac_export_2 PF01312.19 BAM39357.1 - 3.2 6.9 5.8 5.7 6.0 5.8 1.4 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family SICA_C PF12879.7 BAM39359.1 - 0.24 11.4 2.5 8.1 6.5 2.5 2.6 1 1 0 1 1 1 0 SICA C-terminal inner membrane domain UBA PF00627.31 BAM39361.1 - 1.9e-25 88.3 4.1 1.1e-12 47.5 0.7 2.9 2 0 0 2 2 2 2 UBA/TS-N domain XPC-binding PF09280.11 BAM39361.1 - 2.2e-20 72.1 9.7 6.9e-20 70.5 9.7 1.8 1 0 0 1 1 1 1 XPC-binding domain ubiquitin PF00240.23 BAM39361.1 - 9.5e-15 54.1 0.9 1.5e-14 53.4 0.9 1.3 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 BAM39361.1 - 7.5e-05 22.5 0.8 0.00015 21.5 0.8 1.5 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like DUF2407 PF10302.9 BAM39361.1 - 0.00014 22.4 0.2 0.0003 21.3 0.2 1.6 1 0 0 1 1 1 1 DUF2407 ubiquitin-like domain Ubiquitin_4 PF18036.1 BAM39361.1 - 0.012 15.7 0.3 0.024 14.6 0.3 1.5 1 0 0 1 1 1 0 Ubiquitin-like domain Ubiquitin_5 PF18037.1 BAM39361.1 - 0.025 14.9 1.9 0.06 13.7 1.9 1.6 1 0 0 1 1 1 0 Ubiquitin-like domain SbcD_C PF12320.8 BAM39361.1 - 0.052 13.8 2.5 0.099 13.0 0.1 2.6 3 0 0 3 3 3 0 Type 5 capsule protein repressor C-terminal domain TetR_C_22 PF17928.1 BAM39361.1 - 0.082 13.2 0.1 0.43 10.9 0.0 2.1 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain DUF1902 PF08972.11 BAM39361.1 - 0.11 12.5 0.2 0.28 11.2 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF1902) Slx4 PF09494.10 BAM39361.1 - 0.18 11.7 0.0 0.42 10.6 0.0 1.6 1 0 0 1 1 1 0 Slx4 endonuclease DUF4168 PF13767.6 BAM39361.1 - 0.21 12.8 3.9 0.3 12.3 0.1 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4168) KH_1 PF00013.29 BAM39362.1 - 7.4e-09 35.3 0.5 0.00019 21.2 0.1 5.0 6 2 0 6 6 6 2 KH domain KH_4 PF13083.6 BAM39362.1 - 0.0026 17.6 0.0 0.01 15.7 0.0 2.0 1 0 0 1 1 1 1 KH domain SLS PF14611.6 BAM39362.1 - 0.0069 16.2 0.2 0.0069 16.2 0.2 4.3 3 2 2 5 5 5 1 Mitochondrial inner-membrane-bound regulator HTH_19 PF12844.7 BAM39362.1 - 0.16 12.0 1.4 1.9 8.6 0.8 2.9 2 0 0 2 2 2 0 Helix-turn-helix domain Ribonuclease_3 PF00636.26 BAM39362.1 - 0.22 12.1 1.9 8.6 7.0 0.0 3.6 3 1 0 3 3 3 0 Ribonuclease III domain DUF2120 PF09893.9 BAM39362.1 - 3.9 7.6 6.1 22 5.2 2.4 3.8 2 1 1 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2120) DUF2625 PF10946.8 BAM39363.1 - 0.00036 19.6 0.0 10 5.1 0.0 3.3 3 0 0 3 3 3 3 Protein of unknown function DUF2625 RrnaAD PF00398.20 BAM39363.1 - 0.00082 18.5 4.9 13 4.8 0.1 4.6 4 0 0 4 4 4 4 Ribosomal RNA adenine dimethylase zf-CRD PF17979.1 BAM39363.1 - 0.041 14.0 4.1 6.8 6.8 0.2 3.5 2 1 1 3 3 3 0 Cysteine rich domain with multizinc binding regions LTP_2 PF14368.6 BAM39363.1 - 1.4 9.1 4.6 12 6.1 0.4 2.6 1 1 1 2 2 2 0 Probable lipid transfer GTP-bdg_M PF16360.5 BAM39363.1 - 7.7 7.2 8.7 1.4e+02 3.2 0.1 4.3 4 0 0 4 4 4 0 GTP-binding GTPase Middle Region Proteasome PF00227.26 BAM39367.1 - 2.9e-46 157.4 0.2 3.8e-46 157.0 0.2 1.2 1 0 0 1 1 1 1 Proteasome subunit Ras PF00071.22 BAM39369.1 - 2.2e-58 196.4 0.1 2.6e-58 196.2 0.1 1.0 1 0 0 1 1 1 1 Ras family Roc PF08477.13 BAM39369.1 - 9.1e-34 116.3 0.0 1.3e-33 115.8 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 BAM39369.1 - 2.9e-12 46.4 0.0 3.6e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 BAM39369.1 - 3.2e-06 27.2 0.0 6.7e-06 26.2 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 BAM39369.1 - 6.5e-05 22.6 0.0 0.00041 19.9 0.0 2.0 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 BAM39369.1 - 0.00026 20.4 0.0 0.00033 20.1 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 BAM39369.1 - 0.0025 17.8 0.1 0.77 9.6 0.0 2.2 1 1 1 2 2 2 2 RsgA GTPase DNA_pol_E_B PF04042.16 BAM39369.1 - 0.0033 16.8 0.0 0.0047 16.3 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B AAA_22 PF13401.6 BAM39369.1 - 0.032 14.5 0.0 0.068 13.4 0.0 1.7 1 1 1 2 2 2 0 AAA domain AAA_24 PF13479.6 BAM39369.1 - 0.13 12.0 0.2 0.23 11.2 0.2 1.7 1 1 0 1 1 1 0 AAA domain RRM_1 PF00076.22 BAM39370.1 - 1e-29 102.1 0.5 8e-14 51.2 0.1 2.4 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 BAM39370.1 - 3.6e-10 39.8 1.4 0.00017 21.6 0.1 2.8 2 1 0 2 2 2 2 RNA recognition motif Nup35_RRM_2 PF14605.6 BAM39370.1 - 0.00024 21.0 0.2 0.14 12.2 0.0 2.4 2 0 0 2 2 2 2 Nup53/35/40-type RNA recognition motif RL PF17797.1 BAM39370.1 - 0.0047 16.9 0.2 0.51 10.3 0.0 2.5 2 1 0 2 2 2 1 RL domain OB_RNB PF08206.11 BAM39370.1 - 0.048 13.3 0.1 12 5.7 0.0 2.6 2 0 0 2 2 2 0 Ribonuclease B OB domain PHM7_cyt PF14703.6 BAM39370.1 - 0.11 12.7 0.1 2.5 8.3 0.1 2.5 1 1 0 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter RIO1 PF01163.22 BAM39371.1 - 3e-61 206.3 0.1 3e-61 206.3 0.1 2.7 3 1 0 3 3 3 1 RIO1 family Pkinase_fungal PF17667.1 BAM39371.1 - 0.00031 19.7 0.0 0.00062 18.7 0.0 1.5 1 0 0 1 1 1 1 Fungal protein kinase CK_II_beta PF01214.18 BAM39372.1 - 4e-65 219.1 0.4 4.9e-65 218.8 0.4 1.1 1 0 0 1 1 1 1 Casein kinase II regulatory subunit IBR PF01485.21 BAM39372.1 - 0.021 15.1 0.4 0.045 14.0 0.4 1.6 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain UPF0228 PF05727.11 BAM39372.1 - 0.027 14.3 2.2 0.028 14.2 1.1 1.6 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0228) ADK_lid PF05191.14 BAM39372.1 - 0.036 14.0 0.6 0.076 13.0 0.6 1.5 1 0 0 1 1 1 0 Adenylate kinase, active site lid SRP-alpha_N PF04086.13 BAM39373.1 - 0.076 12.9 26.2 0.14 12.1 26.2 1.4 1 0 0 1 1 1 0 Signal recognition particle, alpha subunit, N-terminal SWI-SNF_Ssr4 PF08549.10 BAM39373.1 - 0.77 8.3 17.8 0.83 8.2 17.8 1.1 1 0 0 1 1 1 0 Fungal domain of unknown function (DUF1750) DUF87 PF01935.17 BAM39374.1 - 0.00026 21.1 0.6 0.94 9.5 0.0 3.6 3 0 0 3 3 3 1 Helicase HerA, central domain AAA PF00004.29 BAM39374.1 - 0.00028 21.3 0.0 1.2 9.5 0.0 3.5 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 BAM39374.1 - 0.00078 19.9 0.0 0.21 12.0 0.0 2.6 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 BAM39374.1 - 0.00083 19.6 0.0 1.2 9.4 0.0 2.9 2 0 0 2 2 2 2 AAA domain NACHT PF05729.12 BAM39374.1 - 0.0011 18.9 0.2 0.93 9.4 0.0 2.7 2 1 0 2 2 2 2 NACHT domain RNA_helicase PF00910.22 BAM39374.1 - 0.0013 19.1 0.3 3.2 8.2 0.0 3.3 3 0 0 3 3 2 2 RNA helicase Zeta_toxin PF06414.12 BAM39374.1 - 0.005 16.1 0.1 3.2 7.0 0.1 2.4 2 0 0 2 2 2 2 Zeta toxin Rad17 PF03215.15 BAM39374.1 - 0.0054 16.7 3.8 0.018 15.0 0.1 3.4 3 1 0 3 3 3 1 Rad17 P-loop domain ABC_tran PF00005.27 BAM39374.1 - 0.0059 17.1 0.1 2.7 8.5 0.0 3.0 2 0 0 2 2 2 1 ABC transporter AAA_17 PF13207.6 BAM39374.1 - 0.015 15.8 0.2 6.5 7.2 0.0 2.7 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 BAM39374.1 - 0.022 14.9 0.0 4.2 7.5 0.0 2.5 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 BAM39374.1 - 0.031 14.3 0.0 9.5 6.2 0.0 2.7 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_assoc_2 PF16193.5 BAM39374.1 - 0.036 14.4 0.0 0.12 12.7 0.0 1.9 1 0 0 1 1 1 0 AAA C-terminal domain AAA_24 PF13479.6 BAM39374.1 - 0.039 13.7 0.0 0.25 11.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain TIP49 PF06068.13 BAM39374.1 - 0.04 13.1 0.1 0.15 11.3 0.0 1.9 2 0 0 2 2 2 0 TIP49 P-loop domain NTPase_1 PF03266.15 BAM39374.1 - 0.058 13.3 1.7 13 5.7 0.0 3.0 3 0 0 3 3 3 0 NTPase cobW PF02492.19 BAM39374.1 - 0.076 12.6 0.1 7.8 6.0 0.0 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain TsaE PF02367.17 BAM39374.1 - 0.088 12.8 0.0 2.7 8.0 0.0 2.4 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE SRP54 PF00448.22 BAM39374.1 - 0.24 11.0 0.6 9 5.9 0.1 2.4 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_7 PF12775.7 BAM39374.1 - 0.88 9.1 11.3 11 5.5 0.0 4.1 5 0 0 5 5 5 0 P-loop containing dynein motor region eIF-5a PF01287.20 BAM39375.1 - 6e-26 90.4 0.1 8.6e-26 89.8 0.1 1.2 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 BAM39375.1 - 1.6e-05 24.8 0.1 2.6e-05 24.1 0.1 1.4 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain Cu-oxidase PF00394.22 BAM39375.1 - 0.08 13.1 0.0 0.13 12.3 0.0 1.4 1 0 0 1 1 1 0 Multicopper oxidase zf-Tim10_DDP PF02953.15 BAM39376.1 - 4.2e-16 58.3 0.3 5.1e-16 58.1 0.3 1.1 1 0 0 1 1 1 1 Tim10/DDP family zinc finger Cyto_heme_lyase PF01265.17 BAM39377.1 - 9e-35 120.7 2.3 7.5e-34 117.6 2.3 1.9 1 1 0 1 1 1 1 Cytochrome c/c1 heme lyase KH_1 PF00013.29 BAM39378.1 - 2.5e-05 24.0 0.6 7.2e-05 22.5 0.6 1.8 1 0 0 1 1 1 1 KH domain Reticulon PF02453.17 BAM39379.1 - 6.9e-05 22.9 10.8 0.0001 22.3 10.8 1.2 1 0 0 1 1 1 1 Reticulon zf-CCCH PF00642.24 BAM39380.1 - 0.049 13.6 1.7 0.049 13.6 1.7 2.8 3 0 0 3 3 3 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Med7 PF05983.11 BAM39381.1 - 1.4e-08 35.1 6.9 1.6e-08 34.9 6.9 1.0 1 0 0 1 1 1 1 MED7 protein COG2 PF06148.11 BAM39381.1 - 0.058 13.5 0.3 0.094 12.8 0.2 1.4 1 1 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 Ribosomal_L4 PF00573.22 BAM39382.1 - 1.6e-53 181.2 0.0 2.3e-53 180.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family CLP1_N PF16573.5 BAM39385.1 - 1.9e-21 76.0 0.0 4.3e-21 74.9 0.0 1.6 1 0 0 1 1 1 1 N-terminal beta-sandwich domain of polyadenylation factor CLP1_P PF16575.5 BAM39385.1 - 1.1e-18 67.7 0.4 1.2e-17 64.3 0.0 2.7 3 1 0 3 3 3 1 mRNA cleavage and polyadenylation factor CLP1 P-loop CMAS PF02353.20 BAM39386.1 - 0.15 11.3 0.0 0.2 10.9 0.0 1.1 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Trp_repressor PF01371.19 BAM39387.1 - 0.065 13.4 0.1 0.25 11.5 0.1 2.0 2 0 0 2 2 2 0 Trp repressor protein DUF4434 PF14488.6 BAM39387.1 - 0.098 12.7 2.4 0.17 11.9 0.1 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF4434) DUF968 PF06147.11 BAM39388.1 - 0.073 13.3 0.7 0.19 12.0 0.7 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF968) OmpH PF03938.14 BAM39388.1 - 0.14 12.5 14.4 3.1 8.1 0.3 3.1 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) RNase_PH_C PF03725.15 BAM39389.1 - 1.5e-07 31.3 0.0 2.5e-07 30.6 0.0 1.4 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 DNA_pol_B PF00136.21 BAM39390.1 - 2.7e-132 441.7 2.9 4.1e-132 441.2 2.9 1.3 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 BAM39390.1 - 3.2e-69 233.6 6.2 3.2e-69 233.6 6.2 2.0 2 0 0 2 2 2 1 DNA polymerase family B, exonuclease domain zf-C4pol PF14260.6 BAM39390.1 - 5.3e-14 52.4 14.0 5.3e-14 52.4 14.0 2.0 2 0 0 2 2 2 1 C4-type zinc-finger of DNA polymerase delta DNA_pol_B_2 PF03175.13 BAM39390.1 - 2.7e-05 23.3 0.7 5e-05 22.4 0.7 1.4 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral Noc2 PF03715.13 BAM39391.1 - 3.2e-65 220.3 4.4 9.4e-65 218.8 4.4 1.8 1 0 0 1 1 1 1 Noc2p family Nop14 PF04147.12 BAM39391.1 - 0.00022 19.6 1.4 0.00022 19.6 1.4 2.8 3 0 0 3 3 3 2 Nop14-like family DUF2457 PF10446.9 BAM39391.1 - 0.15 11.1 18.9 0.32 10.1 18.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2457) CwfJ_C_1 PF04677.15 BAM39392.1 - 1.5e-20 73.3 1.2 2.7e-20 72.5 1.2 1.3 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 RRM_1 PF00076.22 BAM39392.1 - 3e-07 30.1 0.0 7.2e-07 28.9 0.0 1.7 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PorA PF11271.8 BAM39392.1 - 0.16 11.2 0.1 0.3 10.3 0.0 1.5 2 0 0 2 2 2 0 Porin PorA Syja_N PF02383.18 BAM39395.1 - 2.4e-61 207.8 0.1 4.7e-61 206.9 0.1 1.4 1 0 0 1 1 1 1 SacI homology domain Membr_traf_MHD PF10540.9 BAM39395.1 - 0.28 11.4 2.7 0.17 12.0 0.2 1.9 2 0 0 2 2 2 0 Munc13 (mammalian uncoordinated) homology domain POX PF07526.11 BAM39395.1 - 0.58 10.7 4.9 4.1 8.0 0.1 3.4 3 1 0 3 3 3 0 Associated with HOX Cyclin_N PF00134.23 BAM39396.1 - 0.007 16.1 0.4 0.038 13.7 0.4 2.2 1 1 0 1 1 1 1 Cyclin, N-terminal domain s48_45 PF07422.13 BAM39396.1 - 0.014 16.0 0.9 0.047 14.3 0.9 1.9 1 0 0 1 1 1 0 Sexual stage antigen s48/45 domain RNase_PH PF01138.21 BAM39397.1 - 0.02 15.4 0.0 0.04 14.4 0.0 1.5 1 0 0 1 1 1 0 3' exoribonuclease family, domain 1 ESR1_C PF12743.7 BAM39397.1 - 0.15 11.9 1.6 13 5.6 0.0 2.5 2 0 0 2 2 2 0 Oestrogen-type nuclear receptor final C-terminal Proteasome PF00227.26 BAM39398.1 - 4e-47 160.2 0.1 5.2e-47 159.8 0.1 1.2 1 0 0 1 1 1 1 Proteasome subunit zf-RING_5 PF14634.6 BAM39399.1 - 0.0005 20.0 8.7 0.0005 20.0 8.7 1.8 2 0 0 2 2 2 1 zinc-RING finger domain Prok-RING_4 PF14447.6 BAM39399.1 - 0.00058 19.7 5.8 0.00058 19.7 5.8 1.8 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf_Hakai PF18408.1 BAM39399.1 - 0.0054 16.4 0.0 0.012 15.3 0.0 1.5 1 0 0 1 1 1 1 C2H2 Hakai zinc finger domain FOXP-CC PF16159.5 BAM39399.1 - 0.01 16.5 0.0 0.21 12.3 0.0 2.3 2 0 0 2 2 2 0 FOXP coiled-coil domain zf-C3HC4_2 PF13923.6 BAM39399.1 - 0.01 15.6 5.8 0.01 15.6 5.8 2.1 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 BAM39399.1 - 0.044 13.8 6.5 0.044 13.8 6.5 2.1 2 0 0 2 2 2 0 RING-type zinc-finger zf-C3HC4 PF00097.25 BAM39399.1 - 1.1 9.2 14.5 5 7.1 14.5 2.2 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 BAM39399.1 - 1.5 9.2 13.5 0.29 11.5 8.5 2.3 3 0 0 3 3 3 0 Ring finger domain BRCA-2_OB1 PF09103.10 BAM39400.1 - 0.0022 18.0 0.3 0.024 14.6 0.1 2.5 2 1 0 2 2 2 1 BRCA2, oligonucleotide/oligosaccharide-binding, domain 1 tRNA_anti-like PF12869.7 BAM39400.1 - 0.043 13.4 0.0 0.12 12.0 0.0 1.6 2 0 0 2 2 2 0 tRNA_anti-like DnaB_2 PF07261.11 BAM39402.1 - 0.031 14.0 0.0 0.055 13.2 0.0 1.5 1 0 0 1 1 1 0 Replication initiation and membrane attachment Chorion_2 PF03964.15 BAM39404.1 - 0.15 12.9 2.1 0.25 12.2 2.1 1.4 1 0 0 1 1 1 0 Chorion family 2 Rpr2 PF04032.16 BAM39406.1 - 3e-14 53.0 0.1 3e-14 53.0 0.1 1.4 2 0 0 2 2 2 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain ADD_ATRX PF17981.1 BAM39406.1 - 0.039 13.8 2.5 0.07 13.0 0.5 2.1 2 0 0 2 2 2 0 Cysteine Rich ADD domain DUF4710 PF15828.5 BAM39407.1 - 0.017 15.2 2.8 0.034 14.3 2.8 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4710) DDHD PF02862.17 BAM39407.1 - 5.7 7.0 11.9 1.7 8.7 2.0 2.3 2 0 0 2 2 2 0 DDHD domain Sec16_C PF12931.7 BAM39408.1 - 0.00029 20.6 0.1 0.00064 19.5 0.1 1.5 1 0 0 1 1 1 1 Sec23-binding domain of Sec16 TPR_19 PF14559.6 BAM39408.1 - 0.029 14.9 0.0 0.13 12.8 0.0 2.1 2 0 0 2 2 2 0 Tetratricopeptide repeat WD40 PF00400.32 BAM39408.1 - 0.055 14.4 0.7 0.72 10.8 0.0 3.4 3 0 0 3 3 3 0 WD domain, G-beta repeat IBN_N PF03810.19 BAM39409.1 - 0.012 15.5 6.4 0.037 14.0 1.9 3.4 3 0 0 3 3 3 0 Importin-beta N-terminal domain E1-E2_ATPase PF00122.20 BAM39410.1 - 2.5e-16 59.7 0.0 7.4e-16 58.2 0.0 1.9 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 BAM39410.1 - 9.5e-09 35.8 0.0 0.00011 22.5 0.0 2.8 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 BAM39410.1 - 6.2e-05 23.0 0.0 0.0002 21.3 0.0 1.9 1 0 0 1 1 1 1 Cation transport ATPase (P-type) Cation_ATPase_N PF00690.26 BAM39410.1 - 0.00022 20.9 0.0 0.00059 19.5 0.0 1.7 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus Ytp1 PF10355.9 BAM39410.1 - 0.002 17.4 1.1 0.004 16.4 1.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (Ytp1) DEAD PF00270.29 BAM39411.1 - 4.4e-24 85.2 3.0 1.5e-23 83.5 0.4 2.5 2 1 1 3 3 3 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM39411.1 - 3.5e-12 46.6 1.1 3.5e-12 46.6 1.1 2.7 4 0 0 4 4 4 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM39411.1 - 4e-10 39.9 1.5 9.5e-10 38.7 0.1 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DUF87 PF01935.17 BAM39411.1 - 0.0058 16.8 0.2 0.11 12.6 0.0 2.3 2 0 0 2 2 2 1 Helicase HerA, central domain Rhodanese PF00581.20 BAM39411.1 - 0.0065 17.0 0.1 0.017 15.7 0.1 1.7 1 0 0 1 1 1 1 Rhodanese-like domain AAA_11 PF13086.6 BAM39411.1 - 0.022 14.5 3.9 0.25 11.1 3.9 2.4 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.6 BAM39411.1 - 0.043 14.1 0.1 0.2 12.0 0.1 2.2 1 1 0 1 1 1 0 AAA domain NAD_binding_3 PF03447.16 BAM39411.1 - 0.067 13.8 0.0 0.14 12.9 0.0 1.7 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain Flavi_DEAD PF07652.14 BAM39411.1 - 0.099 12.6 0.0 0.3 11.0 0.0 1.8 1 0 0 1 1 1 0 Flavivirus DEAD domain AAA_30 PF13604.6 BAM39411.1 - 0.12 12.1 0.0 0.27 10.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain Ribosomal_L31e PF01198.19 BAM39413.1 - 2.1e-36 124.0 1.6 2.6e-36 123.7 1.6 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e TrbC_Ftype PF09673.10 BAM39413.1 - 0.038 14.0 0.1 0.049 13.7 0.1 1.1 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin assembly protein HEAT PF02985.22 BAM39414.1 - 1.6e-09 37.2 0.0 0.1 12.9 0.0 4.8 4 0 0 4 4 4 2 HEAT repeat Cnd1 PF12717.7 BAM39414.1 - 3.1e-08 33.8 0.1 5.5e-07 29.8 0.0 2.6 2 1 0 3 3 3 1 non-SMC mitotic condensation complex subunit 1 CLASP_N PF12348.8 BAM39414.1 - 5.9e-06 26.0 0.1 3.9e-05 23.3 0.1 1.9 1 1 1 2 2 2 2 CLASP N terminal RTP1_C1 PF10363.9 BAM39414.1 - 0.0045 17.1 0.3 0.1 12.8 0.0 2.9 4 0 0 4 4 4 1 Required for nuclear transport of RNA pol II C-terminus 1 Pkinase PF00069.25 BAM39414.1 - 0.005 16.2 0.1 0.011 15.2 0.1 1.6 1 0 0 1 1 1 1 Protein kinase domain Adaptin_N PF01602.20 BAM39414.1 - 0.006 15.2 0.1 0.035 12.7 0.1 1.9 1 1 1 2 2 2 2 Adaptin N terminal region Vac14_Fab1_bd PF12755.7 BAM39414.1 - 0.016 15.8 0.0 3.6 8.2 0.0 3.4 2 1 2 4 4 4 0 Vacuolar 14 Fab1-binding region DM4_12 PF07841.13 BAM39414.1 - 0.054 14.2 0.1 0.12 13.1 0.1 1.6 1 0 0 1 1 1 0 DM4/DM12 family HEAT_2 PF13646.6 BAM39414.1 - 0.13 12.7 0.0 2 8.9 0.0 2.4 1 1 1 2 2 2 0 HEAT repeats Cofilin_ADF PF00241.20 BAM39415.1 - 1.7e-13 50.5 0.0 2.1e-13 50.1 0.0 1.1 1 0 0 1 1 1 1 Cofilin/tropomyosin-type actin-binding protein DUF348 PF03990.14 BAM39415.1 - 0.012 15.3 0.1 0.034 13.9 0.1 1.8 1 0 0 1 1 1 0 G5-linked-Ubiquitin-like domain ABC2_membrane_3 PF12698.7 BAM39416.1 - 0.13 11.4 0.1 0.13 11.4 0.1 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein UPF0239 PF06783.11 BAM39417.1 - 0.13 12.4 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0239) Prefoldin PF02996.17 BAM39418.1 - 2.5e-20 72.6 1.4 3.5e-20 72.1 1.4 1.3 1 0 0 1 1 1 1 Prefoldin subunit DUF4878 PF12870.7 BAM39418.1 - 0.0012 19.2 1.1 0.0019 18.5 0.1 1.8 2 1 0 2 2 2 1 Domain of unknown function (DUF4878) DUF2452 PF10504.9 BAM39418.1 - 0.0037 16.7 0.4 0.011 15.2 0.1 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF2452) APG17 PF04108.12 BAM39418.1 - 0.013 14.7 2.8 0.028 13.5 1.0 1.9 2 0 0 2 2 2 0 Autophagy protein Apg17 Osmo_CC PF08946.10 BAM39418.1 - 3 8.2 6.9 1.4 9.3 0.4 3.0 2 1 0 2 2 2 0 Osmosensory transporter coiled coil p25-alpha PF05517.12 BAM39419.1 - 3.2e-16 59.9 0.0 3.9e-16 59.6 0.0 1.1 1 0 0 1 1 1 1 p25-alpha RE_TaqI PF09573.10 BAM39419.1 - 0.02 14.7 0.1 0.025 14.4 0.1 1.1 1 0 0 1 1 1 0 TaqI restriction endonuclease OSCP PF00213.18 BAM39420.1 - 2.8e-41 141.5 0.0 3.4e-41 141.2 0.0 1.1 1 0 0 1 1 1 1 ATP synthase delta (OSCP) subunit U5_2-snRNA_bdg PF10597.9 BAM39420.1 - 0.067 13.3 0.0 0.49 10.5 0.0 2.0 2 0 0 2 2 2 0 U5-snRNA binding site 2 of PrP8 Myb_DNA-binding PF00249.31 BAM39421.1 - 0.015 15.5 0.0 0.038 14.2 0.0 1.8 1 0 0 1 1 1 0 Myb-like DNA-binding domain UIM PF02809.20 BAM39421.1 - 0.099 12.6 1.3 0.27 11.2 1.3 1.8 1 0 0 1 1 1 0 Ubiquitin interaction motif TRAPPC-Trs85 PF12739.7 BAM39423.1 - 4.8e-06 25.8 0.4 6.8e-06 25.3 0.4 1.3 1 0 0 1 1 1 1 ER-Golgi trafficking TRAPP I complex 85 kDa subunit TRAPPC9-Trs120 PF08626.11 BAM39423.1 - 0.04 11.3 0.0 0.11 9.8 0.0 1.7 2 0 0 2 2 2 0 Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit HSP90 PF00183.18 BAM39425.1 - 2.3e-115 386.5 42.0 3.5e-62 211.0 16.2 7.6 2 1 6 8 8 8 4 Hsp90 protein HATPase_c PF02518.26 BAM39425.1 - 3.8e-07 30.6 0.0 8e-07 29.6 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Rot1 PF10681.9 BAM39425.1 - 0.0097 15.4 0.4 0.0097 15.4 0.4 2.6 4 0 0 4 4 4 1 Chaperone for protein-folding within the ER, fungal Fumble PF03630.14 BAM39426.1 - 2.4e-16 59.8 0.0 2.7e-15 56.4 0.0 2.3 2 1 0 2 2 2 1 Fumble DUF4315 PF14193.6 BAM39427.1 - 0.43 10.6 0.0 0.43 10.6 0.0 2.8 2 1 0 2 2 2 0 Domain of unknown function (DUF4315) SNF2_N PF00176.23 BAM39428.1 - 3.1e-65 220.2 0.0 7.2e-65 219.0 0.0 1.6 1 0 0 1 1 1 1 SNF2 family N-terminal domain SLIDE PF09111.10 BAM39428.1 - 4.5e-26 91.1 1.0 1.2e-25 89.8 1.0 1.8 1 0 0 1 1 1 1 SLIDE Helicase_C PF00271.31 BAM39428.1 - 4.1e-19 68.9 0.0 1.9e-18 66.8 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM39428.1 - 1.5e-09 38.1 0.0 1.1e-08 35.3 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit HDA2-3 PF11496.8 BAM39428.1 - 1.7e-07 30.7 0.3 3.9e-07 29.5 0.3 1.6 1 0 0 1 1 1 1 Class II histone deacetylase complex subunits 2 and 3 DEAD PF00270.29 BAM39428.1 - 2.3e-05 24.3 0.0 7e-05 22.7 0.0 1.9 1 0 0 1 1 1 1 DEAD/DEAH box helicase ERCC3_RAD25_C PF16203.5 BAM39428.1 - 0.00045 19.5 0.0 0.001 18.4 0.0 1.6 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase SWI2_SNF2 PF18766.1 BAM39428.1 - 0.0012 18.5 0.0 0.017 14.8 0.0 2.4 2 0 0 2 2 2 1 SWI2/SNF2 ATPase Cor1 PF04803.12 BAM39428.1 - 0.0014 18.8 0.7 0.0047 17.2 0.7 1.9 1 0 0 1 1 1 1 Cor1/Xlr/Xmr conserved region Myb_DNA-binding PF00249.31 BAM39428.1 - 0.0016 18.6 0.0 0.0076 16.4 0.0 2.3 2 0 0 2 2 1 1 Myb-like DNA-binding domain AAA_14 PF13173.6 BAM39428.1 - 0.0042 17.1 0.1 0.047 13.7 0.0 2.9 2 0 0 2 2 2 1 AAA domain DUF2947 PF11163.8 BAM39428.1 - 0.015 15.2 0.3 0.033 14.0 0.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2947) DUF1086 PF06461.11 BAM39428.1 - 0.098 12.5 0.2 0.29 11.0 0.2 1.8 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1086) SRR1 PF07985.12 BAM39429.1 - 5.5e-07 29.5 0.0 1.4e-06 28.2 0.0 1.7 1 1 0 1 1 1 1 SRR1 AAA PF00004.29 BAM39430.1 - 3e-91 302.7 0.0 3.4e-46 156.9 0.0 2.7 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 BAM39430.1 - 6.5e-23 80.3 4.2 1e-10 41.2 0.3 3.1 2 2 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 BAM39430.1 - 1.4e-20 73.3 0.2 3.7e-20 71.9 0.2 1.8 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain AAA_16 PF13191.6 BAM39430.1 - 1.1e-12 48.6 0.4 0.00025 21.5 0.0 4.1 2 2 0 2 2 2 2 AAA ATPase domain AAA_2 PF07724.14 BAM39430.1 - 2.3e-12 47.4 0.0 2.4e-06 27.8 0.0 2.6 2 1 0 2 2 2 2 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 BAM39430.1 - 6.5e-12 45.5 0.0 1.3e-05 25.0 0.0 2.9 2 1 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_33 PF13671.6 BAM39430.1 - 2.7e-10 40.6 0.0 2.8e-05 24.3 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.14 BAM39430.1 - 3.1e-10 40.2 0.3 1.7e-05 24.9 0.0 3.2 3 1 0 3 3 2 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 BAM39430.1 - 2.2e-08 34.5 0.2 0.029 14.6 0.0 3.8 2 2 0 2 2 2 2 AAA domain CDC48_2 PF02933.17 BAM39430.1 - 5e-08 32.6 0.0 1.2e-07 31.4 0.0 1.6 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 TIP49 PF06068.13 BAM39430.1 - 2.7e-07 30.1 0.1 0.0013 18.1 0.0 2.3 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_18 PF13238.6 BAM39430.1 - 4e-07 30.6 0.0 0.028 15.0 0.0 2.6 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 BAM39430.1 - 7.4e-07 28.8 0.2 0.036 13.4 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 BAM39430.1 - 2.3e-06 27.9 0.0 0.046 14.1 0.0 3.0 3 0 0 3 3 2 2 RNA helicase NACHT PF05729.12 BAM39430.1 - 2.5e-06 27.5 0.0 0.018 15.0 0.0 3.4 4 0 0 4 4 3 2 NACHT domain AAA_25 PF13481.6 BAM39430.1 - 2.7e-06 27.1 0.7 1.2 8.7 0.0 4.0 3 1 0 4 4 4 2 AAA domain IstB_IS21 PF01695.17 BAM39430.1 - 4.1e-06 26.6 0.0 0.048 13.4 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_14 PF13173.6 BAM39430.1 - 2.4e-05 24.4 0.0 0.013 15.5 0.0 2.7 2 1 0 2 2 2 1 AAA domain ATPase_2 PF01637.18 BAM39430.1 - 2.4e-05 24.3 0.0 0.74 9.7 0.0 3.3 3 1 0 3 3 2 2 ATPase domain predominantly from Archaea Vps4_C PF09336.10 BAM39430.1 - 4.3e-05 23.4 0.2 0.002 18.1 0.1 2.6 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_7 PF12775.7 BAM39430.1 - 4.8e-05 22.9 0.0 0.17 11.4 0.0 2.6 2 1 0 2 2 2 2 P-loop containing dynein motor region ATPase PF06745.13 BAM39430.1 - 5.8e-05 22.6 0.1 2.5 7.4 0.0 3.3 3 0 0 3 3 3 1 KaiC ABC_tran PF00005.27 BAM39430.1 - 0.0001 22.8 0.1 0.54 10.8 0.0 3.2 2 1 0 2 2 2 2 ABC transporter Bac_DnaA PF00308.18 BAM39430.1 - 0.00011 22.1 0.0 0.67 9.8 0.0 2.4 2 0 0 2 2 2 2 Bacterial dnaA protein AAA_24 PF13479.6 BAM39430.1 - 0.00013 21.7 0.0 0.16 11.6 0.0 2.8 2 1 0 2 2 2 1 AAA domain AAA_17 PF13207.6 BAM39430.1 - 0.00015 22.2 0.0 0.32 11.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain TsaE PF02367.17 BAM39430.1 - 0.00023 21.2 0.0 1.2 9.2 0.0 2.7 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE Sigma54_activat PF00158.26 BAM39430.1 - 0.00027 20.7 0.0 1 9.0 0.0 3.2 2 1 0 2 2 2 2 Sigma-54 interaction domain AAA_28 PF13521.6 BAM39430.1 - 0.00027 21.2 0.1 1.2 9.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain NB-ARC PF00931.22 BAM39430.1 - 0.00027 20.2 0.0 0.36 10.0 0.0 2.3 2 0 0 2 2 2 2 NB-ARC domain Parvo_NS1 PF01057.17 BAM39430.1 - 0.00029 20.0 0.0 0.45 9.6 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 AAA_3 PF07726.11 BAM39430.1 - 0.001 18.9 0.0 1.3 8.9 0.0 2.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) DUF815 PF05673.13 BAM39430.1 - 0.0011 18.1 0.0 0.32 10.1 0.0 2.5 2 0 0 2 2 2 1 Protein of unknown function (DUF815) PhoH PF02562.16 BAM39430.1 - 0.0016 18.0 0.1 1.1 8.7 0.0 2.5 2 0 0 2 2 2 1 PhoH-like protein ResIII PF04851.15 BAM39430.1 - 0.0018 18.3 0.0 0.33 10.9 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Zeta_toxin PF06414.12 BAM39430.1 - 0.0021 17.3 0.0 0.78 9.0 0.0 2.6 3 0 0 3 3 2 1 Zeta toxin DUF2075 PF09848.9 BAM39430.1 - 0.0037 16.5 0.0 0.75 9.0 0.0 2.3 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) Sigma54_activ_2 PF14532.6 BAM39430.1 - 0.013 15.7 0.0 1.3 9.2 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_19 PF13245.6 BAM39430.1 - 0.014 15.7 0.7 6.2 7.2 0.1 2.9 2 1 0 2 2 2 0 AAA domain AAA_30 PF13604.6 BAM39430.1 - 0.022 14.5 0.1 8 6.1 0.1 2.4 2 0 0 2 2 2 0 AAA domain Rad17 PF03215.15 BAM39430.1 - 0.024 14.6 0.0 4.1 7.3 0.0 2.8 2 1 0 2 2 2 0 Rad17 P-loop domain Cytidylate_kin PF02224.18 BAM39430.1 - 0.039 13.7 0.1 7.5 6.2 0.0 2.4 2 0 0 2 2 2 0 Cytidylate kinase SRPRB PF09439.10 BAM39430.1 - 0.051 13.0 0.1 40 3.6 0.0 3.4 3 1 0 3 3 3 0 Signal recognition particle receptor beta subunit AAA_29 PF13555.6 BAM39430.1 - 0.051 13.3 0.0 6.1 6.7 0.0 2.7 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_11 PF13086.6 BAM39430.1 - 0.053 13.3 0.0 12 5.6 0.0 2.3 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 BAM39430.1 - 0.079 12.7 0.0 11 5.7 0.0 2.6 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase SKI PF01202.22 BAM39430.1 - 0.089 12.9 0.1 18 5.4 0.0 2.4 2 0 0 2 2 2 0 Shikimate kinase NTPase_1 PF03266.15 BAM39430.1 - 0.089 12.7 0.9 30 4.5 0.0 3.6 4 0 0 4 4 3 0 NTPase TniB PF05621.11 BAM39430.1 - 0.1 12.0 0.0 21 4.4 0.0 3.3 3 1 0 3 3 3 0 Bacterial TniB protein F-box PF00646.33 BAM39431.1 - 0.022 14.6 0.0 0.06 13.2 0.0 1.7 1 0 0 1 1 1 0 F-box domain F-box-like PF12937.7 BAM39431.1 - 0.078 12.9 0.5 0.19 11.6 0.0 1.8 2 0 0 2 2 2 0 F-box-like LXG PF04740.12 BAM39432.1 - 0.0016 18.2 0.9 0.0016 18.2 0.9 2.8 2 1 1 3 3 3 1 LXG domain of WXG superfamily QIL1 PF15884.5 BAM39432.1 - 0.031 14.9 1.8 0.31 11.6 0.1 2.7 2 1 0 2 2 2 0 MICOS complex subunit MIC13, QIL1 Sec5 PF15469.6 BAM39432.1 - 0.031 14.1 10.0 0.043 13.6 1.2 2.6 2 1 0 2 2 2 0 Exocyst complex component Sec5 HNH_repeat PF18780.1 BAM39432.1 - 0.068 13.0 0.1 0.16 11.8 0.1 1.7 1 0 0 1 1 1 0 Homing endonuclease repeat Prp18 PF02840.15 BAM39432.1 - 0.26 11.3 7.1 0.088 12.9 1.8 2.6 2 1 1 3 3 3 0 Prp18 domain DUF4810 PF16068.5 BAM39432.1 - 0.65 10.6 4.0 33 5.1 0.2 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4810) CotJB PF12652.7 BAM39432.1 - 3.8 7.8 6.4 11 6.3 0.3 3.5 3 1 1 4 4 4 0 CotJB protein LSM PF01423.22 BAM39433.1 - 4e-13 48.9 0.0 8.9e-12 44.5 0.0 2.1 2 0 0 2 2 2 2 LSM domain Choline_kinase PF01633.20 BAM39435.1 - 1.8e-50 171.5 0.1 2.5e-50 171.0 0.1 1.1 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 BAM39435.1 - 1.3e-13 51.4 0.0 2e-13 50.8 0.0 1.3 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase PF00069.25 BAM39435.1 - 0.0025 17.2 0.3 0.12 11.7 0.0 2.2 2 0 0 2 2 2 1 Protein kinase domain Adeno_E1B_19K PF01691.16 BAM39435.1 - 0.015 14.8 0.0 0.037 13.5 0.0 1.6 1 0 0 1 1 1 0 Adenovirus E1B 19K protein / small t-antigen Fructosamin_kin PF03881.14 BAM39435.1 - 0.034 13.4 0.0 0.056 12.6 0.0 1.3 1 0 0 1 1 1 0 Fructosamine kinase EcKinase PF02958.20 BAM39435.1 - 0.044 13.1 0.0 0.079 12.3 0.0 1.3 1 0 0 1 1 1 0 Ecdysteroid kinase DUF1679 PF07914.11 BAM39435.1 - 0.076 11.9 0.0 0.3 9.9 0.0 1.7 1 1 0 2 2 2 0 Protein of unknown function (DUF1679) Pkinase PF00069.25 BAM39436.1 - 1.5e-58 198.2 0.0 1.8e-58 198.0 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM39436.1 - 1.3e-38 132.8 0.0 1.7e-38 132.4 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 BAM39436.1 - 0.00012 21.0 0.0 0.00017 20.5 0.0 1.1 1 0 0 1 1 1 1 Fungal protein kinase Haspin_kinase PF12330.8 BAM39436.1 - 0.00064 18.8 0.2 0.00091 18.3 0.2 1.3 1 0 0 1 1 1 1 Haspin like kinase domain Kinase-like PF14531.6 BAM39436.1 - 0.0082 15.5 0.0 0.012 14.9 0.0 1.4 1 0 0 1 1 1 1 Kinase-like RIO1 PF01163.22 BAM39436.1 - 0.093 12.3 0.1 0.16 11.6 0.1 1.3 1 0 0 1 1 1 0 RIO1 family Kdo PF06293.14 BAM39436.1 - 0.093 12.1 0.1 0.14 11.4 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family YjeJ PF15922.5 BAM39437.1 - 0.03 13.6 0.7 0.047 12.9 0.7 1.2 1 0 0 1 1 1 0 YjeJ-like D123 PF07065.14 BAM39437.1 - 0.082 12.0 2.7 0.2 10.8 0.1 2.5 1 1 0 2 2 2 0 D123 SRP14 PF02290.15 BAM39437.1 - 0.23 11.9 0.1 0.23 11.9 0.1 2.7 4 0 0 4 4 4 0 Signal recognition particle 14kD protein RRM_1 PF00076.22 BAM39438.1 - 3.5e-74 244.6 1.3 1.8e-20 72.5 0.1 4.3 4 0 0 4 4 4 4 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PABP PF00658.18 BAM39438.1 - 2.5e-27 94.8 0.2 5.8e-25 87.3 0.7 3.2 3 0 0 3 3 3 1 Poly-adenylate binding protein, unique domain Nup35_RRM_2 PF14605.6 BAM39438.1 - 9.6e-09 35.1 0.6 0.8 9.8 0.0 4.4 4 0 0 4 4 4 4 Nup53/35/40-type RNA recognition motif RRM_7 PF16367.5 BAM39438.1 - 0.00036 20.6 0.1 5 7.3 0.0 4.3 4 1 0 4 4 4 1 RNA recognition motif RRM_3 PF08777.11 BAM39438.1 - 0.00064 19.7 0.8 5.3 7.2 0.1 4.0 3 1 1 4 4 4 2 RNA binding motif RRM_occluded PF16842.5 BAM39438.1 - 0.0015 18.3 0.0 4.2 7.3 0.0 3.3 3 0 0 3 3 3 2 Occluded RNA-recognition motif Nup35_RRM PF05172.13 BAM39438.1 - 0.0043 17.0 0.0 0.26 11.2 0.0 3.4 3 1 1 4 4 4 1 Nup53/35/40-type RNA recognition motif RNA_bind PF08675.11 BAM39438.1 - 0.13 12.3 0.1 2.8 8.0 0.0 3.0 4 0 0 4 4 4 0 RNA binding domain RRS1 PF04939.12 BAM39439.1 - 3.4e-47 160.3 1.6 4.9e-47 159.8 1.6 1.2 1 0 0 1 1 1 1 Ribosome biogenesis regulatory protein (RRS1) DUF4695 PF15766.5 BAM39439.1 - 0.43 10.8 5.8 2.1 8.6 0.8 2.5 1 1 1 2 2 2 0 Domain of unknown function (DUF4695) GrpE PF01025.19 BAM39440.1 - 3.5e-45 153.7 6.6 5.3e-45 153.1 6.6 1.3 1 1 0 1 1 1 1 GrpE Jnk-SapK_ap_N PF09744.9 BAM39440.1 - 0.0056 16.9 7.2 0.01 16.0 7.2 1.5 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 Fibin PF15819.5 BAM39440.1 - 0.033 14.0 4.9 0.68 9.7 0.2 2.2 1 1 1 2 2 2 0 Fin bud initiation factor homologue DUF4047 PF13256.6 BAM39440.1 - 1 9.6 4.5 0.39 10.9 0.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4047) GAS PF13851.6 BAM39440.1 - 1.7 7.9 16.3 7 5.9 16.3 1.9 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding LSM PF01423.22 BAM39442.1 - 3.9e-17 61.7 2.6 5.2e-17 61.3 2.6 1.2 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 BAM39442.1 - 0.0073 16.4 0.3 0.0098 16.0 0.3 1.2 1 0 0 1 1 1 1 Ataxin 2 SM domain BPL_C PF02237.17 BAM39442.1 - 0.011 15.6 0.3 0.021 14.7 0.3 1.5 1 0 0 1 1 1 0 Biotin protein ligase C terminal domain DUF2642 PF10842.8 BAM39442.1 - 0.19 11.6 0.8 14 5.6 0.0 2.2 1 1 0 2 2 2 0 Protein of unknown function (DUF2642) Tim44 PF04280.15 BAM39443.1 - 8e-33 113.6 0.0 2.1e-32 112.2 0.0 1.7 2 0 0 2 2 2 1 Tim44-like domain DUF2400 PF09674.10 BAM39443.1 - 0.013 15.5 1.8 0.025 14.6 1.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2400) DUF1664 PF07889.12 BAM39443.1 - 0.019 15.0 2.0 0.038 14.0 2.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) DUF5354 PF17305.2 BAM39443.1 - 0.066 13.4 0.4 0.13 12.5 0.4 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5354) Tim17 PF02466.19 BAM39444.1 - 1.7e-25 89.5 4.7 2.2e-25 89.2 4.7 1.1 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family Phage_holin_3_3 PF16083.5 BAM39444.1 - 0.039 14.1 3.7 0.94 9.6 0.2 2.5 2 1 0 2 2 2 0 LydA holin phage, holin superfamily III MMS19_N PF14500.6 BAM39445.1 - 1.3e-28 100.3 7.9 1.3e-28 100.3 7.9 1.9 2 0 0 2 2 2 1 Dos2-interacting transcription regulator of RNA-Pol-II Leu_leader PF08054.11 BAM39445.1 - 0.027 14.1 0.1 0.074 12.7 0.1 1.7 1 0 0 1 1 1 0 Leucine operon leader peptide PhyH PF05721.13 BAM39446.1 - 2.8e-09 37.6 0.0 7.4e-09 36.2 0.0 1.7 1 1 0 1 1 1 1 Phytanoyl-CoA dioxygenase (PhyH) DUF1479 PF07350.12 BAM39446.1 - 0.027 13.3 0.0 0.046 12.5 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1479) MOLO1 PF17175.4 BAM39447.1 - 1.4e-06 28.4 3.5 8e-05 22.7 0.2 3.2 2 1 0 2 2 2 1 Modulator of levamisole receptor-1 Erf4 PF10256.9 BAM39447.1 - 0.28 11.3 4.1 2 8.6 0.6 3.1 3 1 0 3 3 3 0 Golgin subfamily A member 7/ERF4 family Mt_ATP-synt_D PF05873.12 BAM39447.1 - 0.29 11.0 7.6 0.067 13.0 2.5 2.1 1 1 1 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) DUF4665 PF15679.5 BAM39447.1 - 0.55 10.9 10.2 4.1 8.1 0.1 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4665) DUF3800 PF12686.7 BAM39447.1 - 0.59 10.8 3.0 11 6.6 3.0 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3800) Transket_pyr PF02779.24 BAM39448.1 - 2.6e-42 144.5 0.2 1.3e-41 142.2 0.0 1.9 2 0 0 2 2 2 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 BAM39448.1 - 1.8e-36 124.7 0.0 3.1e-36 124.0 0.0 1.4 1 0 0 1 1 1 1 Transketolase, C-terminal domain PFOR_II PF17147.4 BAM39448.1 - 0.003 17.8 0.0 0.0056 17.0 0.0 1.4 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II tRNA-synt_2b PF00587.25 BAM39449.1 - 2e-33 115.9 0.0 4.3e-33 114.8 0.0 1.6 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 BAM39449.1 - 8.3e-20 70.7 0.1 1.9e-19 69.6 0.1 1.7 1 0 0 1 1 1 1 Anticodon binding domain tRNA_SAD PF07973.14 BAM39449.1 - 2e-06 27.8 0.0 5.6e-06 26.4 0.0 1.8 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain Prenylcys_lyase PF07156.14 BAM39449.1 - 0.009 15.2 0.1 0.12 11.4 0.0 2.3 2 0 0 2 2 2 1 Prenylcysteine lyase ThiF PF00899.21 BAM39450.1 - 3.2e-28 98.7 0.0 5.1e-28 98.1 0.0 1.2 1 0 0 1 1 1 1 ThiF family ATG7_N PF16420.5 BAM39450.1 - 1.2e-13 51.4 0.1 1.8e-13 50.8 0.1 1.3 1 0 0 1 1 1 1 Ubiquitin-like modifier-activating enzyme ATG7 N-terminus 2-Hacid_dh_C PF02826.19 BAM39450.1 - 0.034 13.5 0.0 0.082 12.3 0.0 1.6 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Shikimate_DH PF01488.20 BAM39450.1 - 0.2 11.7 0.2 0.59 10.2 0.1 1.8 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase PLU-1 PF08429.11 BAM39451.1 - 2.5e-32 112.4 16.5 8.4e-32 110.7 10.6 2.5 2 0 0 2 2 2 2 PLU-1-like protein CH_2 PF06294.11 BAM39451.1 - 3.2 7.9 6.9 64 3.8 0.0 4.8 6 0 0 6 6 6 0 CH-like domain in sperm protein EGF_3 PF12947.7 BAM39452.1 - 0.003 17.7 28.0 0.035 14.3 5.0 3.9 4 0 0 4 4 4 3 EGF domain EGF PF00008.27 BAM39452.1 - 0.018 15.3 24.6 0.31 11.4 1.8 3.9 3 2 0 3 3 3 0 EGF-like domain SAPS PF04499.15 BAM39452.1 - 0.22 10.3 0.6 0.29 9.9 0.0 1.4 2 0 0 2 2 2 0 SIT4 phosphatase-associated protein EGF_3 PF12947.7 BAM39453.1 - 7.6e-05 22.8 25.1 0.051 13.8 9.5 4.0 3 1 0 3 3 3 3 EGF domain FOG_N PF15888.5 BAM39453.1 - 0.00048 20.5 0.2 0.0012 19.2 0.2 1.7 1 0 0 1 1 1 1 Folded gastrulation N-terminus EGF PF00008.27 BAM39453.1 - 0.072 13.4 31.3 0.52 10.7 1.0 4.9 3 2 0 3 3 3 0 EGF-like domain hEGF PF12661.7 BAM39453.1 - 4 8.2 19.4 12 6.7 1.2 4.8 3 1 0 3 3 3 0 Human growth factor-like EGF ABC_tran PF00005.27 BAM39454.1 - 3.2e-36 124.8 1.1 5.2e-16 59.4 0.1 4.2 3 2 0 3 3 3 2 ABC transporter AAA_21 PF13304.6 BAM39454.1 - 2.2e-18 67.1 13.8 3.4e-06 27.1 5.5 4.7 3 1 0 3 3 3 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 BAM39454.1 - 3.2e-08 34.3 12.2 0.0054 17.3 9.4 3.7 2 1 0 2 2 2 2 AAA domain SMC_N PF02463.19 BAM39454.1 - 3.3e-08 33.3 12.0 0.0097 15.4 0.3 4.0 4 0 0 4 4 4 3 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 BAM39454.1 - 1.6e-07 30.9 0.1 0.00069 19.3 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 BAM39454.1 - 2.1e-06 28.2 0.0 0.11 12.9 0.0 3.0 3 0 0 3 3 3 2 AAA ATPase domain RsgA_GTPase PF03193.16 BAM39454.1 - 9.1e-06 25.7 0.1 0.17 11.7 0.0 2.7 2 0 0 2 2 2 2 RsgA GTPase Roc PF08477.13 BAM39454.1 - 1e-05 25.7 0.1 0.023 14.9 0.0 2.7 2 0 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 BAM39454.1 - 4.7e-05 23.5 0.1 0.12 12.4 0.0 2.8 2 0 0 2 2 2 2 50S ribosome-binding GTPase AAA_24 PF13479.6 BAM39454.1 - 0.00025 20.8 0.1 0.24 11.1 0.0 3.3 3 0 0 3 3 3 1 AAA domain NACHT PF05729.12 BAM39454.1 - 0.00035 20.5 0.0 0.085 12.8 0.0 2.5 2 0 0 2 2 2 1 NACHT domain DUF5082 PF16888.5 BAM39454.1 - 0.00039 20.7 1.5 0.00098 19.4 1.5 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF5082) AAA_22 PF13401.6 BAM39454.1 - 0.00087 19.6 0.1 1.2 9.4 0.0 3.4 3 0 0 3 3 3 1 AAA domain ABC_tran_Xtn PF12848.7 BAM39454.1 - 0.0016 18.4 0.1 0.0046 17.0 0.1 1.8 1 0 0 1 1 1 1 ABC transporter SKA2 PF16740.5 BAM39454.1 - 0.0031 17.3 1.8 0.0095 15.7 0.4 2.6 3 0 0 3 3 1 1 Spindle and kinetochore-associated protein 2 NB-ARC PF00931.22 BAM39454.1 - 0.0038 16.4 0.0 1.9 7.6 0.0 2.6 2 0 0 2 2 2 1 NB-ARC domain RNA_helicase PF00910.22 BAM39454.1 - 0.0058 17.0 0.0 8.4 6.8 0.0 3.0 2 0 0 2 2 2 0 RNA helicase AAA_14 PF13173.6 BAM39454.1 - 0.0067 16.5 1.0 2.6 8.1 0.0 4.1 5 0 0 5 5 4 1 AAA domain AAA PF00004.29 BAM39454.1 - 0.0093 16.4 0.0 3.1 8.2 0.0 3.0 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 BAM39454.1 - 0.01 16.4 0.0 4.1 8.0 0.0 3.0 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 BAM39454.1 - 0.01 15.3 0.1 3.3 7.2 0.0 2.6 2 0 0 2 2 2 0 P-loop containing dynein motor region Sigma54_activat PF00158.26 BAM39454.1 - 0.027 14.2 0.0 6 6.5 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain LtuB PF17455.2 BAM39454.1 - 0.033 14.8 3.5 0.4 11.3 0.2 3.5 3 1 1 4 4 3 0 Late transcription unit B Ras PF00071.22 BAM39454.1 - 0.034 13.8 0.0 0.88 9.2 0.0 2.5 2 0 0 2 2 2 0 Ras family TsaE PF02367.17 BAM39454.1 - 0.043 13.8 0.0 0.35 10.9 0.0 2.2 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE MCM PF00493.23 BAM39454.1 - 0.057 12.5 0.0 9.3 5.3 0.0 2.7 2 0 0 2 2 2 0 MCM P-loop domain Seryl_tRNA_N PF02403.22 BAM39454.1 - 0.063 13.5 1.8 0.21 11.8 1.8 1.9 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain NTPase_1 PF03266.15 BAM39454.1 - 0.072 13.0 0.0 20 5.0 0.0 2.7 2 0 0 2 2 2 0 NTPase Dynamin_N PF00350.23 BAM39454.1 - 0.17 11.9 4.8 1.7 8.6 0.0 3.3 3 1 0 3 3 3 0 Dynamin family AAA_15 PF13175.6 BAM39454.1 - 0.29 10.8 39.4 0.025 14.3 3.7 5.6 3 2 2 6 6 5 0 AAA ATPase domain EAP30 PF04157.16 BAM39455.1 - 1.3e-07 31.2 1.6 2.2e-07 30.4 1.6 1.4 1 0 0 1 1 1 1 EAP30/Vps36 family DUF1128 PF06569.11 BAM39455.1 - 0.0052 16.8 0.6 0.12 12.4 0.3 2.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1128) RRM_1 PF00076.22 BAM39457.1 - 7.4e-12 44.9 0.0 1.1e-11 44.3 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 BAM39457.1 - 0.012 15.4 0.0 0.03 14.2 0.0 1.7 1 1 0 1 1 1 0 Occluded RNA-recognition motif Paxillin PF03535.13 BAM39457.1 - 0.17 11.7 0.0 0.29 11.0 0.0 1.3 1 0 0 1 1 1 0 Paxillin family Ribosomal_L29 PF00831.23 BAM39458.1 - 4.6e-16 58.5 2.9 4.6e-16 58.5 2.9 2.6 2 1 0 2 2 2 1 Ribosomal L29 protein DUF4541 PF15074.6 BAM39458.1 - 0.024 15.2 0.6 0.038 14.6 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4541) Muted PF14942.6 BAM39458.1 - 0.13 12.6 6.4 0.23 11.8 6.4 1.4 1 1 0 1 1 1 0 Organelle biogenesis, Muted-like protein Mlo PF03094.15 BAM39458.1 - 0.28 9.5 3.1 0.31 9.4 3.1 1.0 1 0 0 1 1 1 0 Mlo family PGK PF00162.19 BAM39459.1 - 1.2e-142 475.4 0.1 1.3e-142 475.2 0.1 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase FAINT PF04385.15 BAM39461.1 - 1.4e-12 47.5 12.3 0.0013 18.7 0.1 3.8 3 1 0 3 3 3 3 Domain of unknown function, DUF529 TcdB_N PF12918.7 BAM39461.1 - 0.26 11.6 7.7 37 4.7 0.3 4.3 4 0 0 4 4 4 0 TcdB toxin N-terminal helical domain OGG_N PF07934.12 BAM39464.1 - 3.5e-14 52.9 0.1 8.6e-14 51.7 0.1 1.7 1 1 0 1 1 1 1 8-oxoguanine DNA glycosylase, N-terminal domain HhH-GPD PF00730.25 BAM39464.1 - 3.9e-10 40.1 0.0 5.5e-10 39.6 0.0 1.2 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 BAM39464.1 - 1.5e-05 24.6 0.0 5.4e-05 22.9 0.0 1.9 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 BAM39464.1 - 0.069 13.8 0.0 0.22 12.2 0.0 1.9 2 0 0 2 2 2 0 Helix-hairpin-helix domain AP2 PF00847.20 BAM39465.1 - 1.2e-11 44.7 3.3 2e-11 44.0 3.3 1.4 1 0 0 1 1 1 1 AP2 domain DUF1284 PF06935.11 BAM39465.1 - 0.017 15.5 0.2 0.035 14.6 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1284) TFIIS_M PF07500.14 BAM39465.1 - 0.053 14.0 0.0 0.1 13.1 0.0 1.5 1 0 0 1 1 1 0 Transcription factor S-II (TFIIS), central domain ClpS PF02617.17 BAM39466.1 - 6.6e-14 51.5 0.0 1.3e-13 50.6 0.0 1.4 1 0 0 1 1 1 1 ATP-dependent Clp protease adaptor protein ClpS DUF615 PF04751.14 BAM39466.1 - 0.0062 16.5 2.5 0.0077 16.2 2.5 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF615) Peptidase_S26 PF10502.9 BAM39467.1 - 1.7e-06 27.9 0.0 0.0011 18.7 0.0 2.2 1 1 1 2 2 2 2 Signal peptidase, peptidase S26 Peptidase_S24 PF00717.23 BAM39467.1 - 0.0044 16.9 0.0 0.0081 16.1 0.0 1.5 1 0 0 1 1 1 1 Peptidase S24-like Clusterin PF01093.17 BAM39468.1 - 0.011 14.9 1.1 0.015 14.4 0.7 1.4 1 1 0 1 1 1 0 Clusterin V-SNARE_C PF12352.8 BAM39468.1 - 0.021 15.1 3.1 3.7 7.9 0.1 2.5 2 0 0 2 2 2 0 Snare region anchored in the vesicle membrane C-terminus DUF5089 PF17002.5 BAM39468.1 - 0.092 12.6 2.8 0.47 10.3 2.8 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF5089) SOAR PF16533.5 BAM39468.1 - 0.18 11.8 1.7 0.87 9.6 0.3 2.2 2 0 0 2 2 2 0 STIM1 Orai1-activating region Shugoshin_N PF07558.11 BAM39468.1 - 1.6 8.7 8.3 3.7 7.5 0.0 3.2 4 0 0 4 4 4 0 Shugoshin N-terminal coiled-coil region FAINT PF04385.15 BAM39469.1 - 3.9e-14 52.5 1.7 1.9e-06 27.9 0.1 2.5 2 0 0 2 2 2 2 Domain of unknown function, DUF529 zf-C3HC4_3 PF13920.6 BAM39470.1 - 0.00041 20.2 4.2 0.00041 20.2 4.2 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) LRR_6 PF13516.6 BAM39470.1 - 0.011 15.7 0.0 0.07 13.2 0.0 2.3 2 0 0 2 2 2 0 Leucine Rich repeat Phage_holin_4_2 PF04020.13 BAM39472.1 - 0.017 15.8 3.0 0.053 14.2 3.0 2.0 1 1 0 1 1 1 0 Mycobacterial 4 TMS phage holin, superfamily IV DUF2157 PF09925.9 BAM39472.1 - 0.13 12.0 0.2 0.13 12.0 0.2 2.1 1 1 1 2 2 2 0 Predicted membrane protein (DUF2157) DUF4271 PF14093.6 BAM39472.1 - 0.69 9.8 5.3 1.7 8.5 1.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4271) RNA_pol PF00940.19 BAM39473.1 - 2.3e-130 435.2 0.8 2.1e-129 432.0 0.0 2.7 3 1 0 3 3 3 1 DNA-dependent RNA polymerase RPOL_N PF14700.6 BAM39473.1 - 3.9e-21 75.8 1.1 7e-09 35.5 0.0 3.1 2 1 0 2 2 2 2 DNA-directed RNA polymerase N-terminal HrpE PF06188.12 BAM39474.1 - 0.13 12.1 0.3 0.3 10.9 0.2 1.6 1 1 0 1 1 1 0 HrpE/YscL/FliH and V-type ATPase subunit E NuA4 PF09340.10 BAM39474.1 - 0.13 12.1 2.4 0.15 12.0 0.5 2.1 2 0 0 2 2 2 0 Histone acetyltransferase subunit NuA4 AGOG PF09171.10 BAM39474.1 - 4.3 6.6 9.9 0.49 9.7 3.1 2.2 2 0 0 2 2 2 0 N-glycosylase/DNA lyase ubiquitin PF00240.23 BAM39475.1 - 0.00012 21.8 0.1 0.00015 21.4 0.1 1.2 1 0 0 1 1 1 1 Ubiquitin family PDR_CDR PF06422.12 BAM39475.1 - 0.011 15.6 0.2 0.019 14.9 0.2 1.3 1 0 0 1 1 1 0 CDR ABC transporter SPC25 PF06703.11 BAM39475.1 - 0.097 12.5 1.1 0.15 11.8 1.1 1.3 1 0 0 1 1 1 0 Microsomal signal peptidase 25 kDa subunit (SPC25) DNA_pol3_delta2 PF13177.6 BAM39476.1 - 3.7e-15 56.1 0.0 3e-14 53.1 0.0 2.1 1 1 0 1 1 1 1 DNA polymerase III, delta subunit AAA PF00004.29 BAM39476.1 - 5.9e-13 49.4 0.0 9.9e-13 48.7 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rep_fac_C PF08542.11 BAM39476.1 - 7e-11 42.4 0.0 1.6e-10 41.3 0.0 1.6 1 0 0 1 1 1 1 Replication factor C C-terminal domain Rad17 PF03215.15 BAM39476.1 - 1.1e-06 28.7 0.0 2e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_11 PF13086.6 BAM39476.1 - 1.4e-05 25.1 0.0 2e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 BAM39476.1 - 1.9e-05 24.5 0.0 3.3e-05 23.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 BAM39476.1 - 3.5e-05 24.1 0.0 0.00015 22.0 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 BAM39476.1 - 0.00016 21.7 0.1 0.00037 20.5 0.1 1.6 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) DNA_pol3_delta PF06144.13 BAM39476.1 - 0.00019 21.3 0.0 0.00031 20.6 0.0 1.3 1 0 0 1 1 1 1 DNA polymerase III, delta subunit AAA_assoc_2 PF16193.5 BAM39476.1 - 0.00025 21.3 0.1 0.0011 19.2 0.0 2.1 2 0 0 2 2 2 1 AAA C-terminal domain AAA_19 PF13245.6 BAM39476.1 - 0.00028 21.3 0.1 0.0017 18.7 0.1 2.1 1 1 0 1 1 1 1 AAA domain RuvB_N PF05496.12 BAM39476.1 - 0.00053 19.8 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_24 PF13479.6 BAM39476.1 - 0.00056 19.7 0.0 0.001 18.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain DEAD PF00270.29 BAM39476.1 - 0.0013 18.6 0.1 2.3 7.9 0.0 2.9 2 1 1 3 3 3 2 DEAD/DEAH box helicase TIP49 PF06068.13 BAM39476.1 - 0.0088 15.3 0.2 0.043 13.0 0.0 2.1 2 1 1 3 3 3 1 TIP49 P-loop domain AAA_16 PF13191.6 BAM39476.1 - 0.012 16.0 0.0 0.072 13.5 0.0 2.3 2 1 0 2 2 1 0 AAA ATPase domain PhoH PF02562.16 BAM39476.1 - 0.015 14.7 0.5 0.13 11.7 0.0 2.1 1 1 0 2 2 2 0 PhoH-like protein Mg_chelatase PF01078.21 BAM39476.1 - 0.016 14.6 0.1 0.16 11.3 0.0 2.4 2 1 1 3 3 3 0 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 BAM39476.1 - 0.017 14.9 0.4 0.14 11.9 0.4 2.2 1 1 0 1 1 1 0 IstB-like ATP binding protein ResIII PF04851.15 BAM39476.1 - 0.023 14.7 0.1 0.39 10.7 0.0 2.2 1 1 0 2 2 2 0 Type III restriction enzyme, res subunit DUF2075 PF09848.9 BAM39476.1 - 0.025 13.8 0.0 0.042 13.1 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) Hydin_ADK PF17213.3 BAM39476.1 - 0.037 14.3 0.1 0.062 13.6 0.1 1.3 1 0 0 1 1 1 0 Hydin Adenylate kinase-like domain AAA_25 PF13481.6 BAM39476.1 - 0.059 12.9 0.0 0.11 12.0 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 BAM39476.1 - 0.062 13.5 0.0 0.098 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain PIF1 PF05970.14 BAM39476.1 - 0.065 12.4 0.0 0.14 11.3 0.0 1.5 1 1 0 1 1 1 0 PIF1-like helicase DnaB_C PF03796.15 BAM39476.1 - 0.076 12.3 0.0 0.13 11.5 0.0 1.3 1 0 0 1 1 1 0 DnaB-like helicase C terminal domain KTI12 PF08433.10 BAM39476.1 - 0.078 12.4 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 Chromatin associated protein KTI12 TPR_6 PF13174.6 BAM39476.1 - 0.15 12.8 1.2 6.1 7.7 0.0 3.7 4 1 0 4 4 3 0 Tetratricopeptide repeat AAA_28 PF13521.6 BAM39476.1 - 0.16 12.2 0.0 0.25 11.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain Ribosomal_S26e PF01283.19 BAM39478.1 - 1.6e-48 163.6 7.7 1.7e-48 163.5 7.7 1.0 1 0 0 1 1 1 1 Ribosomal protein S26e SRP19 PF01922.17 BAM39478.1 - 0.026 15.5 0.4 0.062 14.3 0.4 1.7 1 1 0 1 1 1 0 SRP19 protein Eapp_C PF10238.9 BAM39479.1 - 2.2e-17 63.5 10.2 1.4e-15 57.6 10.2 2.1 1 1 0 1 1 1 1 E2F-associated phosphoprotein Pkinase PF00069.25 BAM39481.1 - 1.6e-79 267.0 0.9 2.4e-79 266.4 0.1 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM39481.1 - 1.3e-43 149.2 0.1 3.9e-43 147.6 0.0 1.7 2 0 0 2 2 2 1 Protein tyrosine kinase EF-hand_1 PF00036.32 BAM39481.1 - 3.5e-25 85.6 5.7 2.1e-05 23.7 0.5 4.6 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 BAM39481.1 - 9.7e-22 77.2 5.0 1.6e-11 44.5 0.3 2.9 2 1 0 2 2 2 2 EF-hand domain pair EF-hand_5 PF13202.6 BAM39481.1 - 6.6e-20 69.6 4.5 8.8e-05 21.8 0.0 4.4 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 BAM39481.1 - 1.4e-19 68.3 4.6 7.8e-05 22.3 0.0 4.7 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 BAM39481.1 - 3.2e-14 52.5 8.7 0.016 15.1 0.3 4.7 3 1 1 4 4 4 4 EF-hand domain pair SPARC_Ca_bdg PF10591.9 BAM39481.1 - 3e-06 27.5 5.7 0.0088 16.4 0.3 3.2 2 1 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region Kinase-like PF14531.6 BAM39481.1 - 4.9e-05 22.8 0.0 0.00045 19.6 0.0 2.6 2 1 0 2 2 2 1 Kinase-like APH PF01636.23 BAM39481.1 - 5.6e-05 23.2 0.0 0.057 13.3 0.0 2.2 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 BAM39481.1 - 0.0004 19.8 0.1 0.00067 19.1 0.1 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 BAM39481.1 - 0.00072 18.4 0.0 0.0011 17.8 0.0 1.4 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 BAM39481.1 - 0.0032 17.1 1.8 0.055 13.1 0.0 2.8 3 1 1 4 4 4 1 Kinetochore Sim4 complex subunit FTA2 DUF5580 PF17743.1 BAM39481.1 - 0.014 14.0 0.1 0.022 13.3 0.1 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5580) EF-hand_4 PF12763.7 BAM39481.1 - 0.017 15.0 6.4 0.073 13.0 0.2 3.8 2 1 2 4 4 4 0 Cytoskeletal-regulatory complex EF hand DEK_C PF08766.11 BAM39481.1 - 0.092 12.7 0.3 0.32 10.9 0.3 2.0 1 0 0 1 1 1 0 DEK C terminal domain YrbL-PhoP_reg PF10707.9 BAM39481.1 - 0.12 11.8 1.0 0.74 9.3 0.0 2.4 3 0 0 3 3 3 0 PhoP regulatory network protein YrbL Dockerin_1 PF00404.18 BAM39481.1 - 5.2 7.3 8.4 32 4.8 0.1 4.4 5 1 1 6 6 5 0 Dockerin type I domain TSP_1 PF00090.19 BAM39482.1 - 0.0018 18.4 5.5 0.0018 18.4 5.5 2.4 2 1 0 2 2 2 1 Thrombospondin type 1 domain WD40 PF00400.32 BAM39483.1 - 1.5e-05 25.7 4.3 2.5 9.1 0.1 5.4 5 1 0 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM39483.1 - 1.7e-05 25.0 0.0 0.6 10.4 0.0 3.8 3 1 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 BAM39483.1 - 0.00077 19.3 0.0 2 8.4 0.0 2.8 3 0 0 3 3 3 2 WD40-like Beta Propeller Repeat eIF2A PF08662.11 BAM39483.1 - 0.019 14.8 0.2 2 8.3 0.0 3.1 1 1 2 3 3 3 0 Eukaryotic translation initiation factor eIF2A FAINT PF04385.15 BAM39484.1 - 2.4e-13 49.9 21.4 2.3e-06 27.6 1.5 7.2 7 1 0 7 7 7 3 Domain of unknown function, DUF529 HA70_C PF17993.1 BAM39484.1 - 0.0077 16.3 0.7 0.74 9.9 0.0 3.1 3 0 0 3 3 3 1 Haemagglutinin 70 C-terminal domain AbLIM_anchor PF16182.5 BAM39484.1 - 0.038 13.8 1.5 0.074 12.9 1.5 1.4 1 0 0 1 1 1 0 Putative adherens-junction anchoring region of AbLIM EMP24_GP25L PF01105.24 BAM39484.1 - 0.75 9.7 4.5 0.29 11.0 0.8 2.1 2 0 0 2 2 2 0 emp24/gp25L/p24 family/GOLD Tfb2 PF03849.14 BAM39485.1 - 5.7e-61 206.5 13.5 1.2e-60 205.3 13.5 1.6 1 1 0 1 1 1 1 Transcription factor Tfb2 Tfb2_C PF18307.1 BAM39485.1 - 0.0012 19.2 2.8 0.0017 18.7 1.0 2.2 2 0 0 2 2 2 1 Transcription factor Tfb2 (p52) C-terminal domain Helicase_C_3 PF13625.6 BAM39485.1 - 0.0044 17.2 0.0 0.026 14.7 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain Snf7 PF03357.21 BAM39485.1 - 0.01 15.4 0.6 0.028 14.0 0.6 1.7 1 0 0 1 1 1 0 Snf7 Arg_repressor PF01316.21 BAM39485.1 - 0.058 13.2 0.0 0.2 11.4 0.0 1.9 1 0 0 1 1 1 0 Arginine repressor, DNA binding domain DUF573 PF04504.14 BAM39485.1 - 0.12 13.0 4.9 1.1 9.9 4.9 2.6 1 1 0 1 1 1 0 Protein of unknown function, DUF573 CSN5_C PF18323.1 BAM39485.1 - 0.6 11.1 5.2 0.15 13.0 0.5 2.4 2 1 1 3 3 3 0 Cop9 signalosome subunit 5 C-terminal domain FliD_N PF02465.18 BAM39485.1 - 4.9 7.9 8.2 1 10.1 1.9 2.9 3 0 0 3 3 3 0 Flagellar hook-associated protein 2 N-terminus PH PF00169.29 BAM39486.1 - 0.00013 22.4 1.6 0.00026 21.4 1.6 1.5 1 0 0 1 1 1 1 PH domain PH_10 PF15411.6 BAM39486.1 - 0.00028 21.2 1.4 0.0005 20.3 1.3 1.5 1 1 0 1 1 1 1 Pleckstrin homology domain PH_4 PF15404.6 BAM39486.1 - 0.039 13.7 1.3 0.063 13.1 1.2 1.4 1 1 0 1 1 1 0 Pleckstrin homology domain Synaptobrevin PF00957.21 BAM39487.1 - 7e-06 25.7 0.8 1.8e-05 24.4 0.5 1.9 2 0 0 2 2 2 1 Synaptobrevin I_LWEQ PF01608.17 BAM39487.1 - 0.004 17.4 0.0 0.0081 16.4 0.0 1.4 1 0 0 1 1 1 1 I/LWEQ domain Cytomega_gL PF01801.16 BAM39487.1 - 0.025 14.0 0.0 0.035 13.5 0.0 1.2 1 0 0 1 1 1 0 Cytomegalovirus glycoprotein L Ntox50 PF15542.6 BAM39487.1 - 0.13 13.0 0.0 5.2 8.0 0.0 2.4 2 0 0 2 2 2 0 Bacterial toxin 50 LSM PF01423.22 BAM39488.1 - 2.1e-16 59.4 0.1 2.3e-16 59.2 0.1 1.0 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 BAM39488.1 - 0.012 15.7 0.0 0.014 15.5 0.0 1.1 1 0 0 1 1 1 0 Ataxin 2 SM domain SlpA PF03217.14 BAM39488.1 - 0.055 14.1 0.4 0.13 12.9 0.1 1.7 2 0 0 2 2 2 0 Surface later protein A domain Pribosyltran_N PF13793.6 BAM39489.1 - 1.2e-34 118.7 0.0 6.1e-34 116.4 0.0 1.9 2 0 0 2 2 2 1 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyl_synth PF14572.6 BAM39489.1 - 1.6e-24 86.9 0.9 8.1e-24 84.7 0.1 2.2 2 1 1 3 3 3 1 Phosphoribosyl synthetase-associated domain Pribosyltran PF00156.27 BAM39489.1 - 1.2e-11 44.4 0.4 1.2e-09 37.9 0.3 2.5 2 1 0 2 2 2 2 Phosphoribosyl transferase domain UPRTase PF14681.6 BAM39489.1 - 0.0056 16.1 0.0 0.0094 15.4 0.0 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Rad10 PF03834.14 BAM39492.1 - 1.5e-35 121.7 0.9 1.9e-35 121.3 0.1 1.5 2 0 0 2 2 2 1 Binding domain of DNA repair protein Ercc1 (rad10/Swi10) HHH_5 PF14520.6 BAM39492.1 - 0.15 12.6 0.0 0.3 11.7 0.0 1.5 1 0 0 1 1 1 0 Helix-hairpin-helix domain TMF_TATA_bd PF12325.8 BAM39493.1 - 0.0024 18.1 7.5 0.0024 18.1 7.5 1.9 2 0 0 2 2 2 1 TATA element modulatory factor 1 TATA binding V-SNARE PF05008.15 BAM39493.1 - 0.0025 18.2 1.1 0.0025 18.2 1.1 1.8 2 0 0 2 2 2 1 Vesicle transport v-SNARE protein N-terminus Laminin_II PF06009.12 BAM39493.1 - 0.034 14.2 7.3 0.085 12.9 7.3 1.6 1 0 0 1 1 1 0 Laminin Domain II SlyX PF04102.12 BAM39493.1 - 0.042 14.5 5.7 0.38 11.4 0.4 2.9 2 1 1 3 3 3 0 SlyX TFA2_Winged_2 PF18121.1 BAM39493.1 - 0.052 13.3 4.5 0.85 9.4 0.0 3.0 3 0 0 3 3 3 0 TFA2 Winged helix domain 2 Rit1_C PF17184.4 BAM39493.1 - 0.11 11.9 2.9 0.22 11.0 2.7 1.5 1 1 0 1 1 1 0 Rit1 N-terminal domain PAZ_siRNAbind PF12212.8 BAM39493.1 - 0.12 12.2 5.6 0.042 13.7 2.5 1.7 2 0 0 2 2 2 0 PAZ domain DHR10 PF18595.1 BAM39493.1 - 0.13 12.4 12.7 0.031 14.3 9.0 1.8 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain Seryl_tRNA_N PF02403.22 BAM39493.1 - 0.29 11.4 13.1 0.046 14.0 8.3 2.0 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain Occludin_ELL PF07303.13 BAM39493.1 - 0.74 10.6 12.1 19 6.1 0.1 2.3 2 0 0 2 2 2 0 Occludin homology domain eIF-4B PF06273.11 BAM39493.1 - 0.93 8.5 7.1 1.5 7.7 7.1 1.3 1 1 0 1 1 1 0 Plant specific eukaryotic initiation factor 4B MALT1_Ig PF18703.1 BAM39493.1 - 1.4 8.9 6.1 0.56 10.2 1.9 2.0 2 0 0 2 2 2 0 MALT1 Ig-like domain DUF4140 PF13600.6 BAM39493.1 - 1.8 9.1 4.6 1.8 9.0 1.0 2.2 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) CENP-H PF05837.12 BAM39493.1 - 5.8 7.4 10.1 2.8 8.4 7.1 1.9 2 0 0 2 2 2 0 Centromere protein H (CENP-H) DivIC PF04977.15 BAM39493.1 - 8 6.3 13.6 0.47 10.3 4.6 2.8 2 1 1 3 3 3 0 Septum formation initiator RRM_5 PF13893.6 BAM39494.1 - 0.036 13.7 2.6 0.76 9.4 0.1 3.0 3 0 0 3 3 3 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) NRN1 PF15056.6 BAM39494.1 - 0.15 12.2 0.8 0.36 11.0 0.8 1.6 1 0 0 1 1 1 0 Neuritin protein family THOC7 PF05615.13 BAM39494.1 - 0.24 11.7 16.6 0.58 10.4 16.6 1.6 1 0 0 1 1 1 0 Tho complex subunit 7 Spc7 PF08317.11 BAM39494.1 - 1.4 7.7 17.4 3 6.6 17.4 1.4 1 0 0 1 1 1 0 Spc7 kinetochore protein Activator-TraM PF11657.8 BAM39494.1 - 2.3 8.1 5.6 6.9 6.5 5.6 1.8 1 0 0 1 1 1 0 Transcriptional activator TraM Nup88 PF10168.9 BAM39494.1 - 2.5 5.8 13.6 4 5.1 13.6 1.2 1 0 0 1 1 1 0 Nuclear pore component AAA_11 PF13086.6 BAM39494.1 - 2.9 7.6 8.4 6 6.6 8.4 1.4 1 0 0 1 1 1 0 AAA domain kleA_kleC PF17383.2 BAM39494.1 - 3.6 8.0 5.4 4.4 7.7 3.9 1.9 1 1 0 1 1 1 0 Uncharacterized KorC regulated protein A PRKG1_interact PF15898.5 BAM39494.1 - 4.1 8.4 20.7 0.42 11.5 15.2 2.2 2 1 0 2 2 1 0 cGMP-dependent protein kinase interacting domain TMPIT PF07851.13 BAM39494.1 - 5.4 6.2 9.3 9.2 5.4 9.3 1.3 1 0 0 1 1 1 0 TMPIT-like protein DUF4407 PF14362.6 BAM39494.1 - 5.5 6.3 9.9 11 5.2 9.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) Jnk-SapK_ap_N PF09744.9 BAM39494.1 - 7.3 6.8 25.5 22 5.3 23.2 2.6 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 Exonuc_VII_L PF02601.15 BAM39494.1 - 8.8 5.8 9.3 15 5.0 9.3 1.4 1 0 0 1 1 1 0 Exonuclease VII, large subunit NFACT-R_1 PF05670.13 BAM39496.1 - 1.3e-08 35.5 0.2 2.7e-08 34.4 0.2 1.6 1 0 0 1 1 1 1 NFACT protein RNA binding domain NFACT-R_2 PF18297.1 BAM39496.1 - 1.6e-06 28.2 0.0 5.7e-06 26.5 0.0 2.0 1 0 0 1 1 1 1 NFACT protein RNA binding domain SCF PF02404.15 BAM39496.1 - 0.074 12.4 1.5 0.23 10.8 1.5 1.8 1 0 0 1 1 1 0 Stem cell factor WD40 PF00400.32 BAM39497.1 - 0.0017 19.2 3.0 4.7 8.2 0.0 4.1 4 0 0 4 4 4 2 WD domain, G-beta repeat tRNA-synt_2c PF01411.19 BAM39498.1 - 3.4e-185 616.7 0.0 4.9e-185 616.2 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 BAM39498.1 - 3.6e-12 46.2 1.0 2.8e-11 43.3 0.6 2.5 2 0 0 2 2 2 1 Threonyl and Alanyl tRNA synthetase second additional domain Vps53_N PF04100.12 BAM39499.1 - 1.3e-53 182.4 5.0 2.8e-53 181.3 5.0 1.5 1 0 0 1 1 1 1 Vps53-like, N-terminal DUF4217 PF13959.6 BAM39499.1 - 1.1 9.6 2.9 5.7 7.3 0.1 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4217) DUF4795 PF16043.5 BAM39499.1 - 1.8 8.1 8.2 0.3 10.7 1.4 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4795) VPS53_C PF16854.5 BAM39499.1 - 5.2 6.9 7.5 0.39 10.6 0.1 2.8 3 0 0 3 3 3 0 Vacuolar protein sorting-associated protein 53 C-terminus NIF PF03031.18 BAM39500.1 - 5.5e-33 113.9 0.1 9.1e-33 113.2 0.1 1.4 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase MFMR_assoc PF16596.5 BAM39500.1 - 0.057 13.9 3.4 0.097 13.1 3.4 1.3 1 0 0 1 1 1 0 Disordered region downstream of MFMR DWNN PF08783.11 BAM39501.1 - 6.1e-09 36.0 0.2 1.9e-08 34.4 0.0 2.0 2 0 0 2 2 2 1 DWNN domain DUF3396 PF11876.8 BAM39501.1 - 0.033 13.7 0.0 0.062 12.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3396) zinc_ribbon_9 PF14369.6 BAM39501.1 - 0.036 14.3 0.2 0.095 13.0 0.2 1.7 1 0 0 1 1 1 0 zinc-ribbon zf-RING_UBOX PF13445.6 BAM39501.1 - 0.33 11.0 13.1 3 7.9 8.0 2.6 1 1 1 2 2 2 0 RING-type zinc-finger PseudoU_synth_2 PF00849.22 BAM39502.1 - 5.8e-26 91.5 0.2 1.1e-25 90.6 0.2 1.5 1 0 0 1 1 1 1 RNA pseudouridylate synthase Tcf25 PF04910.14 BAM39503.1 - 1.5e-36 126.2 3.0 2.7e-36 125.4 3.0 1.3 1 0 0 1 1 1 1 Transcriptional repressor TCF25 Actin PF00022.19 BAM39504.1 - 1.5e-50 172.1 0.0 2.1e-50 171.5 0.0 1.2 1 0 0 1 1 1 1 Actin MtN3_slv PF03083.16 BAM39505.1 - 1.7e-22 79.2 13.7 1.6e-12 47.3 2.7 2.5 2 0 0 2 2 2 2 Sugar efflux transporter for intercellular exchange SNAPc_SNAP43 PF09808.9 BAM39506.1 - 1.9e-05 24.7 0.3 2.5e-05 24.3 0.3 1.2 1 0 0 1 1 1 1 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 ATP_bind_1 PF03029.17 BAM39507.1 - 1.5e-68 231.2 0.0 1.7e-68 231.0 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 BAM39507.1 - 0.00011 22.5 0.0 0.0018 18.6 0.0 2.3 2 0 0 2 2 2 1 AAA domain KTI12 PF08433.10 BAM39507.1 - 0.00012 21.7 0.0 0.00052 19.5 0.0 1.9 2 0 0 2 2 2 1 Chromatin associated protein KTI12 AAA_17 PF13207.6 BAM39507.1 - 0.00037 20.9 0.1 0.0053 17.2 0.0 2.4 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 BAM39507.1 - 0.00075 19.6 0.0 0.0066 16.5 0.0 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase AAA_18 PF13238.6 BAM39507.1 - 0.0014 19.2 0.0 0.0056 17.2 0.0 1.9 1 1 0 1 1 1 1 AAA domain CbiA PF01656.23 BAM39507.1 - 0.0015 18.6 0.0 0.002 18.2 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 BAM39507.1 - 0.0016 18.4 0.1 0.0045 16.9 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_33 PF13671.6 BAM39507.1 - 0.0016 18.6 0.0 0.019 15.2 0.0 2.2 2 1 0 2 2 2 1 AAA domain CLP1_P PF16575.5 BAM39507.1 - 0.0017 18.2 0.0 0.015 15.1 0.0 2.4 3 0 0 3 3 3 1 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_16 PF13191.6 BAM39507.1 - 0.0065 16.9 0.0 0.028 14.8 0.0 2.1 1 1 0 1 1 1 1 AAA ATPase domain Fer4_NifH PF00142.18 BAM39507.1 - 0.0078 15.7 0.0 1.9 7.9 0.0 2.1 2 0 0 2 2 2 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_7 PF12775.7 BAM39507.1 - 0.0078 15.7 0.0 0.035 13.6 0.0 1.9 2 0 0 2 2 2 1 P-loop containing dynein motor region MeaB PF03308.16 BAM39507.1 - 0.016 14.2 0.0 0.026 13.5 0.0 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_5 PF07728.14 BAM39507.1 - 0.017 15.1 0.0 0.044 13.8 0.0 1.7 2 0 0 2 2 1 0 AAA domain (dynein-related subfamily) ArsA_ATPase PF02374.15 BAM39507.1 - 0.022 14.0 0.0 0.064 12.4 0.0 1.7 2 0 0 2 2 2 0 Anion-transporting ATPase ADK PF00406.22 BAM39507.1 - 0.023 14.8 0.6 0.28 11.3 0.0 2.7 3 1 0 3 3 3 0 Adenylate kinase RNA_helicase PF00910.22 BAM39507.1 - 0.031 14.7 0.0 0.18 12.2 0.0 2.2 2 0 0 2 2 2 0 RNA helicase AAA PF00004.29 BAM39507.1 - 0.032 14.7 0.0 0.085 13.3 0.0 1.8 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.12 BAM39507.1 - 0.045 13.0 0.0 0.085 12.1 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin AAA_30 PF13604.6 BAM39507.1 - 0.064 13.0 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 BAM39507.1 - 0.094 12.5 0.0 0.2 11.4 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain SRP54 PF00448.22 BAM39507.1 - 0.12 12.0 0.0 0.22 11.1 0.0 1.3 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain T2SSE PF00437.20 BAM39507.1 - 0.19 10.7 0.0 0.48 9.4 0.0 1.6 2 0 0 2 2 2 0 Type II/IV secretion system protein ThiF PF00899.21 BAM39509.1 - 1.5e-43 149.0 0.4 9.6e-43 146.3 0.4 2.0 1 1 0 1 1 1 1 ThiF family Rhodanese PF00581.20 BAM39509.1 - 6.4e-05 23.4 0.1 0.0002 21.8 0.0 1.8 2 0 0 2 2 2 1 Rhodanese-like domain UDPG_MGDP_dh_N PF03721.14 BAM39509.1 - 0.067 12.8 0.0 0.11 12.0 0.0 1.3 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PglD_N PF17836.1 BAM39509.1 - 0.11 13.1 0.3 0.31 11.7 0.3 1.8 1 0 0 1 1 1 0 PglD N-terminal domain DnaJ PF00226.31 BAM39510.1 - 0.0038 17.3 0.1 0.013 15.6 0.1 1.9 1 0 0 1 1 1 1 DnaJ domain HA2 PF04408.23 BAM39511.1 - 1.4e-20 73.6 0.2 3.3e-20 72.4 0.2 1.6 1 0 0 1 1 1 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 BAM39511.1 - 4.6e-19 68.6 0.0 8.7e-19 67.7 0.0 1.5 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Helicase_C PF00271.31 BAM39511.1 - 6.8e-14 52.2 0.0 1.7e-13 50.9 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 BAM39511.1 - 2.2e-08 34.1 0.3 3.8e-08 33.3 0.3 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.6 BAM39511.1 - 0.0002 21.6 0.2 0.00065 20.0 0.1 1.9 2 0 0 2 2 1 1 AAA domain AAA_30 PF13604.6 BAM39511.1 - 0.00028 20.7 0.1 0.00048 19.9 0.1 1.3 1 0 0 1 1 1 1 AAA domain ResIII PF04851.15 BAM39511.1 - 0.0005 20.1 0.1 0.26 11.3 0.0 2.5 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Flavi_DEAD PF07652.14 BAM39511.1 - 0.0012 18.9 0.1 0.0022 18.0 0.1 1.4 1 0 0 1 1 1 1 Flavivirus DEAD domain AAA_19 PF13245.6 BAM39511.1 - 0.0034 17.7 0.2 0.0064 16.8 0.2 1.4 1 0 0 1 1 1 1 AAA domain PhoH PF02562.16 BAM39511.1 - 0.012 15.1 0.2 0.058 12.8 0.1 2.0 2 0 0 2 2 2 0 PhoH-like protein AAA_7 PF12775.7 BAM39511.1 - 0.013 15.1 0.1 0.024 14.2 0.1 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_23 PF13476.6 BAM39511.1 - 0.013 16.0 0.0 0.028 14.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 BAM39511.1 - 0.022 14.5 0.0 0.04 13.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 BAM39511.1 - 0.022 14.4 0.1 0.049 13.3 0.1 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_25 PF13481.6 BAM39511.1 - 0.035 13.7 0.0 0.084 12.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 BAM39511.1 - 0.039 13.7 0.2 0.7 9.6 0.0 2.2 1 1 0 2 2 2 0 IstB-like ATP binding protein ABC_tran PF00005.27 BAM39511.1 - 0.061 13.8 0.0 0.19 12.2 0.0 1.8 1 0 0 1 1 1 0 ABC transporter ATPase PF06745.13 BAM39511.1 - 0.071 12.4 0.0 0.15 11.4 0.0 1.5 1 0 0 1 1 1 0 KaiC T2SSE PF00437.20 BAM39511.1 - 0.11 11.5 0.0 0.22 10.5 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein TsaE PF02367.17 BAM39511.1 - 0.13 12.3 0.0 0.32 11.0 0.0 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 BAM39511.1 - 0.17 11.8 0.2 0.48 10.3 0.2 1.7 1 0 0 1 1 1 0 NACHT domain Cue1_U7BR PF18499.1 BAM39511.1 - 0.8 9.8 3.0 0.55 10.3 0.3 2.1 2 0 0 2 2 2 0 Ubc7p-binding region of Cue1 DUF996 PF06195.13 BAM39512.1 - 2.2e-05 24.8 13.7 0.00011 22.6 8.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF996) DUF3671 PF12420.8 BAM39512.1 - 0.086 12.9 11.0 0.4 10.8 6.6 2.5 2 0 0 2 2 2 0 Protein of unknown function DUF2207 PF09972.9 BAM39512.1 - 0.61 8.8 14.2 0.24 10.1 6.1 2.3 2 1 0 2 2 2 0 Predicted membrane protein (DUF2207) Nuclease_act PF08133.11 BAM39512.1 - 9.1 6.6 6.4 0.53 10.5 1.0 1.9 2 0 0 2 2 2 0 Anticodon nuclease activator family DUF1204 PF06721.11 BAM39513.1 - 0.019 14.5 0.1 0.038 13.4 0.1 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1204) RlmM_FDX PF18125.1 BAM39513.1 - 0.1 13.1 0.1 5.1 7.7 0.0 2.8 2 0 0 2 2 2 0 RlmM ferredoxin-like domain zf-C3HC4_3 PF13920.6 BAM39514.1 - 2.2e-13 49.8 5.2 4.8e-13 48.7 5.2 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 BAM39514.1 - 5.4e-09 35.8 4.8 5.4e-09 35.8 4.8 1.7 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 BAM39514.1 - 3.3e-06 27.3 7.0 3.3e-06 27.3 7.0 2.2 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4 PF00097.25 BAM39514.1 - 1.5e-05 24.7 7.0 4.1e-05 23.4 7.0 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 BAM39514.1 - 3e-05 23.8 7.0 8.6e-05 22.3 7.0 1.9 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 BAM39514.1 - 4.4e-05 23.4 7.7 5.1e-05 23.2 6.0 2.0 1 1 1 2 2 2 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 BAM39514.1 - 0.015 15.3 2.1 0.015 15.3 2.1 3.1 3 1 1 4 4 4 0 RING-type zinc-finger PspB PF06667.12 BAM39514.1 - 0.11 12.5 0.3 0.25 11.4 0.3 1.5 1 0 0 1 1 1 0 Phage shock protein B zf-C3HC4_4 PF15227.6 BAM39514.1 - 0.25 11.5 6.1 2.3 8.4 6.3 2.6 1 1 1 2 2 2 0 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 BAM39514.1 - 0.62 9.9 6.2 1.5 8.7 6.2 1.7 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain RL10P_insert PF17777.1 BAM39515.1 - 5.7e-21 74.3 0.0 1.1e-20 73.4 0.0 1.5 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_L10 PF00466.20 BAM39515.1 - 4.8e-10 39.5 0.1 9.3e-10 38.5 0.1 1.5 1 1 0 1 1 1 1 Ribosomal protein L10 LMP PF04778.12 BAM39515.1 - 0.032 14.2 2.5 0.055 13.4 2.5 1.3 1 0 0 1 1 1 0 LMP repeated region tRNA-synt_1d PF00750.19 BAM39516.1 - 5.8e-49 166.9 0.3 1.2e-23 83.6 0.0 2.5 1 1 1 2 2 2 2 tRNA synthetases class I (R) DALR_1 PF05746.15 BAM39516.1 - 3.5e-22 78.8 0.4 8.4e-22 77.6 0.4 1.7 1 0 0 1 1 1 1 DALR anticodon binding domain PIG-P PF08510.12 BAM39516.1 - 0.11 12.5 0.5 0.3 11.0 0.1 1.9 2 0 0 2 2 2 0 PIG-P Eaf7 PF07904.13 BAM39516.1 - 0.23 11.9 4.5 0.34 11.3 1.3 3.0 2 1 0 2 2 2 0 Chromatin modification-related protein EAF7 UTP15_C PF09384.10 BAM39518.1 - 4.5e-25 88.1 0.0 6.9e-25 87.4 0.0 1.2 1 0 0 1 1 1 1 UTP15 C terminal WD40 PF00400.32 BAM39518.1 - 1e-15 57.8 18.5 5.7e-05 23.8 0.1 6.9 7 0 0 7 7 7 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM39518.1 - 5e-09 36.3 0.0 0.46 10.8 0.0 4.7 1 1 4 5 5 5 3 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 BAM39518.1 - 0.1 11.5 0.0 8.5 5.2 0.0 2.2 2 0 0 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein Pkinase PF00069.25 BAM39519.1 - 6.8e-05 22.4 0.1 7.4e-05 22.2 0.1 1.0 1 0 0 1 1 1 1 Protein kinase domain AsnC_trans_reg PF01037.21 BAM39519.1 - 0.1 12.6 0.0 0.27 11.2 0.0 1.7 1 1 0 1 1 1 0 Lrp/AsnC ligand binding domain Bromodomain PF00439.25 BAM39520.1 - 1.9e-08 34.2 0.2 1.6e-07 31.3 0.0 2.8 3 0 0 3 3 3 1 Bromodomain ANAPC4_WD40 PF12894.7 BAM39520.1 - 6.3e-07 29.6 0.0 0.069 13.5 0.0 4.2 2 1 1 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 BAM39520.1 - 6.7e-05 23.6 9.9 0.39 11.7 0.1 6.2 5 0 0 5 5 5 2 WD domain, G-beta repeat zf-HC5HC2H PF13771.6 BAM39520.1 - 0.13 12.5 10.7 0.77 10.1 10.7 2.5 1 0 0 1 1 1 0 PHD-like zinc-binding domain Ribosomal_S20p PF01649.18 BAM39520.1 - 9.1 7.0 9.3 0.28 11.9 1.7 2.5 2 0 0 2 2 2 0 Ribosomal protein S20 AAR2 PF05282.11 BAM39521.1 - 3.5e-65 220.7 2.4 4.3e-65 220.4 2.4 1.1 1 0 0 1 1 1 1 AAR2 protein DASH_Dad3 PF08656.10 BAM39521.1 - 0.2 11.7 2.2 2.6 8.2 0.0 3.0 3 1 0 3 3 3 0 DASH complex subunit Dad3 RRM_1 PF00076.22 BAM39522.1 - 4e-23 81.0 0.8 7.5e-23 80.1 0.2 1.8 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 BAM39522.1 - 2.7e-05 23.8 1.9 3.3e-05 23.5 0.9 1.6 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 BAM39522.1 - 0.00013 22.0 0.1 0.00029 20.9 0.1 1.8 1 1 0 1 1 1 1 RNA recognition motif CLZ PF16526.5 BAM39522.1 - 0.0016 18.8 9.3 0.057 13.8 2.1 2.5 1 1 1 2 2 2 2 C-terminal leucine zipper domain of cyclic nucleotide-gated channels RRM_occluded PF16842.5 BAM39522.1 - 0.0049 16.7 0.0 0.012 15.4 0.0 1.7 1 0 0 1 1 1 1 Occluded RNA-recognition motif Plant_NMP1 PF06694.11 BAM39522.1 - 0.012 14.8 3.6 0.018 14.2 3.6 1.2 1 0 0 1 1 1 0 Plant nuclear matrix protein 1 (NMP1) SusD-like_3 PF14322.6 BAM39522.1 - 0.015 15.6 0.1 0.029 14.7 0.1 1.6 1 0 0 1 1 1 0 Starch-binding associating with outer membrane SseB_C PF14581.6 BAM39522.1 - 0.017 15.3 1.4 0.076 13.1 0.1 2.4 1 1 2 3 3 3 0 SseB protein C-terminal domain PIEZO PF15917.5 BAM39522.1 - 0.046 13.2 12.3 1 8.8 1.6 2.3 1 1 1 2 2 2 0 Piezo Nup35_RRM_2 PF14605.6 BAM39522.1 - 0.049 13.6 0.0 0.1 12.6 0.0 1.6 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif DUF2089 PF09862.9 BAM39522.1 - 0.055 13.5 3.6 0.041 13.9 2.1 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2089) TraH PF06122.11 BAM39522.1 - 0.062 12.6 1.6 0.085 12.1 1.5 1.3 1 1 0 1 1 1 0 Conjugative relaxosome accessory transposon protein RasGEF_N_2 PF14663.6 BAM39522.1 - 0.084 13.3 1.8 2.2 8.7 0.1 2.6 1 1 2 3 3 3 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain DUF4175 PF13779.6 BAM39522.1 - 0.1 10.5 2.6 0.12 10.2 2.6 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4175) PHM7_cyt PF14703.6 BAM39522.1 - 0.13 12.5 0.3 0.13 12.5 0.3 3.1 1 1 2 3 3 3 0 Cytosolic domain of 10TM putative phosphate transporter FUSC-like PF12805.7 BAM39522.1 - 0.14 11.3 0.3 0.22 10.5 0.3 1.4 1 0 0 1 1 1 0 FUSC-like inner membrane protein yccS SPOUT_MTase PF02590.17 BAM39522.1 - 0.17 11.8 0.2 0.17 11.8 0.2 2.6 1 1 2 3 3 3 0 Predicted SPOUT methyltransferase Chordopox_G2 PF05796.12 BAM39522.1 - 0.18 11.2 6.5 0.67 9.4 3.4 2.4 1 1 1 2 2 2 0 Chordopoxvirus protein G2 Laminin_II PF06009.12 BAM39522.1 - 0.29 11.2 8.6 0.075 13.0 1.6 2.3 1 1 1 2 2 2 0 Laminin Domain II zf-ZPR1 PF03367.13 BAM39522.1 - 0.62 9.9 4.7 0.93 9.3 4.7 1.3 1 0 0 1 1 1 0 ZPR1 zinc-finger domain Hira PF07569.11 BAM39523.1 - 0.018 14.8 0.2 0.079 12.7 0.0 2.1 3 0 0 3 3 3 0 TUP1-like enhancer of split BD_b_sandwich PF18820.1 BAM39523.1 - 0.046 13.7 0.9 0.094 12.7 0.1 1.8 2 0 0 2 2 2 0 Bdellovibrio Beta-sandwich Myb_DNA-bind_6 PF13921.6 BAM39524.1 - 1.1e-08 35.2 1.3 5.8e-06 26.5 0.0 4.0 2 2 2 4 4 4 1 Myb-like DNA-binding domain Myb_DNA-binding PF00249.31 BAM39524.1 - 6.5e-07 29.4 0.2 0.00015 21.8 0.0 3.3 3 0 0 3 3 3 1 Myb-like DNA-binding domain HTH_23 PF13384.6 BAM39524.1 - 0.095 12.5 1.9 9.5 6.2 0.0 3.5 3 0 0 3 3 3 0 Homeodomain-like domain PaaX_C PF08223.11 BAM39524.1 - 0.16 12.3 0.0 0.57 10.5 0.0 1.9 2 0 0 2 2 2 0 PaaX-like protein C-terminal domain RAP PF08373.10 BAM39525.1 - 1.4e-15 57.1 0.1 8.6e-15 54.6 0.1 2.3 2 0 0 2 2 2 1 RAP domain HD_5 PF13487.6 BAM39525.1 - 0.025 14.8 0.0 0.057 13.7 0.0 1.6 1 0 0 1 1 1 0 HD domain MTES_1575 PF18741.1 BAM39525.1 - 0.034 14.3 0.0 4.9 7.4 0.0 2.6 2 0 0 2 2 2 0 REase_MTES_1575 DUF559 PF04480.12 BAM39525.1 - 0.057 13.3 0.0 0.17 11.7 0.0 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF559) MPP6 PF10175.9 BAM39526.1 - 9.3e-06 26.2 0.4 1.1e-05 25.9 0.4 1.1 1 0 0 1 1 1 1 M-phase phosphoprotein 6 DASH_Dad2 PF08654.10 BAM39527.1 - 0.0053 17.2 0.4 0.016 15.6 0.4 1.8 1 0 0 1 1 1 1 DASH complex subunit Dad2 Pox_H7 PF04787.12 BAM39527.1 - 0.016 15.7 3.1 0.032 14.7 3.1 1.4 1 0 0 1 1 1 0 Late protein H7 DUF2373 PF10180.9 BAM39527.1 - 0.12 12.2 1.2 0.28 11.0 1.2 1.6 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2373) Nipped-B_C PF12830.7 BAM39528.1 - 0.01 15.8 4.1 0.31 11.0 0.3 4.0 3 0 0 3 3 3 0 Sister chromatid cohesion C-terminus Urb2 PF10441.9 BAM39528.1 - 0.032 14.2 0.2 0.24 11.3 0.0 2.7 3 0 0 3 3 3 0 Urb2/Npa2 family BUD22 PF09073.10 BAM39528.1 - 0.091 12.1 9.3 0.032 13.6 3.3 2.7 2 0 0 2 2 2 0 BUD22 DUF963 PF06131.11 BAM39528.1 - 8.9 5.8 14.6 0.4 10.1 8.2 1.9 2 0 0 2 2 2 0 Schizosaccharomyces pombe repeat of unknown function (DUF963) Rad60-SLD PF11976.8 BAM39529.1 - 2.8e-24 84.7 0.0 4e-24 84.2 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like ubiquitin PF00240.23 BAM39529.1 - 4.7e-12 45.5 0.0 6e-12 45.1 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin family UBX PF00789.20 BAM39529.1 - 0.03 14.5 0.0 0.04 14.1 0.0 1.2 1 0 0 1 1 1 0 UBX domain CLP_protease PF00574.23 BAM39530.1 - 2.3e-57 193.8 0.1 2.6e-57 193.7 0.1 1.0 1 0 0 1 1 1 1 Clp protease PurA PF04845.13 BAM39530.1 - 0.068 12.5 0.0 0.098 12.0 0.0 1.1 1 0 0 1 1 1 0 PurA ssDNA and RNA-binding protein Ephrin_rec_like PF07699.13 BAM39531.1 - 1.1e-32 111.6 120.8 3.7e-06 26.6 0.1 12.0 11 1 1 12 12 12 10 Putative ephrin-receptor like MAR_sialic_bdg PF10564.9 BAM39531.1 - 1.2e-07 31.6 4.8 0.0081 16.2 0.7 3.7 1 1 1 2 2 2 2 Sialic-acid binding micronemal adhesive repeat RANK_CRD_2 PF18278.1 BAM39531.1 - 0.072 13.3 26.9 0.4 10.9 0.8 7.7 8 0 0 8 8 8 0 Receptor activator of the NF-KB cysteine-rich repeat domain 2 Ephrin_rec_like PF07699.13 BAM39532.1 - 7.8e-31 105.6 114.8 1.3e-09 37.6 10.4 10.5 9 1 1 10 10 10 9 Putative ephrin-receptor like RANK_CRD_2 PF18278.1 BAM39532.1 - 0.0014 18.7 22.7 0.34 11.1 0.8 6.4 6 0 0 6 6 6 3 Receptor activator of the NF-KB cysteine-rich repeat domain 2 GTP_EFTU PF00009.27 BAM39533.1 - 1e-48 165.5 0.2 1.9e-48 164.6 0.2 1.5 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain LepA_C PF06421.12 BAM39533.1 - 3.3e-26 91.5 0.1 1.1e-25 89.8 0.1 1.9 2 0 0 2 2 2 1 GTP-binding protein LepA C-terminus EFG_C PF00679.24 BAM39533.1 - 9e-19 67.3 0.1 2.3e-18 66.0 0.1 1.8 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 BAM39533.1 - 1.8e-11 44.3 0.3 4.6e-11 42.9 0.3 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 EFG_II PF14492.6 BAM39533.1 - 8.9e-07 28.9 0.0 3.2e-06 27.1 0.0 2.0 1 1 0 1 1 1 1 Elongation Factor G, domain II MMR_HSR1 PF01926.23 BAM39533.1 - 1.1e-05 25.5 0.0 2.2e-05 24.5 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase Ras PF00071.22 BAM39533.1 - 2.9e-05 23.7 0.1 8.8e-05 22.2 0.1 1.9 2 1 0 2 2 2 1 Ras family FeoB_N PF02421.18 BAM39533.1 - 0.021 14.4 0.1 0.089 12.3 0.1 2.1 2 1 0 2 2 2 0 Ferrous iron transport protein B Porin_3 PF01459.22 BAM39534.1 - 1.5e-25 90.2 0.1 4.3e-25 88.7 0.1 1.6 1 1 0 1 1 1 1 Eukaryotic porin SopD PF11047.8 BAM39535.1 - 0.13 11.5 0.1 0.19 10.9 0.1 1.3 1 0 0 1 1 1 0 Salmonella outer protein D Patatin PF01734.22 BAM39536.1 - 6.6e-08 33.0 0.1 2e-05 24.8 0.0 2.4 2 0 0 2 2 2 2 Patatin-like phospholipase Aconitase PF00330.20 BAM39537.1 - 3.4e-173 576.9 0.0 4.4e-173 576.5 0.0 1.1 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 BAM39537.1 - 3.9e-41 140.4 0.0 7.2e-41 139.6 0.0 1.5 1 0 0 1 1 1 1 Aconitase C-terminal domain Ribosomal_L2_C PF03947.18 BAM39538.1 - 1.6e-43 147.9 4.2 3.1e-43 147.0 4.2 1.4 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 BAM39538.1 - 2.1e-18 66.0 0.3 5.9e-18 64.6 0.3 1.8 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain RNase_PH PF01138.21 BAM39539.1 - 1e-16 61.6 0.0 1.6e-16 61.0 0.0 1.3 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 BAM39539.1 - 0.00037 20.5 0.1 0.00078 19.4 0.1 1.6 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 MutS_III PF05192.18 BAM39540.1 - 0.088 13.0 0.1 0.34 11.1 0.0 2.1 2 1 0 2 2 2 0 MutS domain III tRNA-synt_1c PF00749.21 BAM39541.1 - 5.4e-105 350.8 0.7 5.4e-105 350.8 0.7 1.5 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 BAM39541.1 - 1.7e-31 109.4 5.1 2.2e-31 109.0 0.8 3.0 2 1 0 2 2 2 1 tRNA synthetases class I (E and Q), anti-codon binding domain GST_C PF00043.25 BAM39541.1 - 1.6e-07 31.4 0.1 4.1e-07 30.1 0.1 1.7 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 BAM39541.1 - 5.3e-07 29.7 0.3 1.5e-05 25.1 0.1 3.0 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 BAM39541.1 - 0.012 15.7 0.0 0.032 14.3 0.0 1.8 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Ribonuc_P_40 PF08584.11 BAM39543.1 - 2e-07 30.6 1.3 4.4e-07 29.5 1.0 1.9 1 1 0 1 1 1 1 Ribonuclease P 40kDa (Rpp40) subunit EMA PF02488.15 BAM39544.1 - 1.1e-91 306.9 21.3 1.4e-91 306.6 21.3 1.0 1 0 0 1 1 1 1 Merozoite Antigen Lactamase_B_2 PF12706.7 BAM39544.1 - 0.064 12.8 0.0 0.092 12.2 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain FAINT PF04385.15 BAM39544.1 - 1.8 8.7 10.9 2.3 8.4 2.8 3.2 3 1 0 3 3 3 0 Domain of unknown function, DUF529 DapH_N PF08503.10 BAM39544.1 - 2.4 8.4 6.3 0.87 9.9 1.0 2.6 2 1 1 3 3 3 0 Tetrahydrodipicolinate succinyltransferase N-terminal Myb_Cef PF11831.8 BAM39547.1 - 2.3e-29 102.7 6.8 2.3e-29 102.7 6.8 2.8 3 0 0 3 3 3 1 pre-mRNA splicing factor component Myb_DNA-binding PF00249.31 BAM39547.1 - 9.9e-20 70.5 5.9 6.2e-11 42.3 1.0 2.8 2 0 0 2 2 2 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 BAM39547.1 - 5.6e-16 58.5 7.4 1.6e-11 44.2 2.9 3.1 1 1 1 2 2 2 2 Myb-like DNA-binding domain SANT_DAMP1_like PF16282.5 BAM39547.1 - 0.027 14.6 0.6 0.16 12.2 0.4 2.5 1 1 0 1 1 1 0 SANT/Myb-like domain of DAMP1 RAP PF08373.10 BAM39548.1 - 3.7e-17 62.2 4.2 3.7e-17 62.2 4.2 2.2 2 0 0 2 2 2 1 RAP domain MTES_1575 PF18741.1 BAM39548.1 - 9.6e-08 32.1 0.5 2.2e-07 31.0 0.1 1.8 2 0 0 2 2 2 1 REase_MTES_1575 DUF559 PF04480.12 BAM39548.1 - 0.015 15.2 0.0 0.039 13.8 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF559) FAST_1 PF06743.15 BAM39548.1 - 0.025 14.5 6.7 3.1 7.8 0.1 3.8 3 1 1 4 4 4 0 FAST kinase-like protein, subdomain 1 DUF2107 PF09880.9 BAM39548.1 - 0.054 13.6 0.0 0.48 10.6 0.0 2.3 2 0 0 2 2 2 0 Predicted membrane protein (DUF2107) Npun_R1517 PF18068.1 BAM39549.1 - 0.16 12.3 1.3 0.42 11.0 0.1 2.3 3 0 0 3 3 3 0 Npun R1517 DNA_pol3_delta2 PF13177.6 BAM39550.1 - 1.2e-14 54.5 0.0 2.1e-14 53.7 0.0 1.4 1 0 0 1 1 1 1 DNA polymerase III, delta subunit AAA_16 PF13191.6 BAM39550.1 - 0.031 14.7 0.1 0.49 10.8 0.1 2.4 1 1 0 1 1 1 0 AAA ATPase domain Rep_fac_C PF08542.11 BAM39550.1 - 0.034 14.6 0.0 0.083 13.3 0.0 1.7 1 0 0 1 1 1 0 Replication factor C C-terminal domain FF PF01846.19 BAM39551.1 - 9.8e-07 28.9 11.4 1.6e-06 28.2 0.1 4.5 4 1 0 4 4 4 2 FF domain WW PF00397.26 BAM39551.1 - 1.9e-05 24.6 6.3 4e-05 23.6 6.3 1.5 1 0 0 1 1 1 1 WW domain Not1 PF04054.15 BAM39552.1 - 1.7e-06 27.2 0.0 0.00026 20.0 0.0 2.4 2 0 0 2 2 2 2 CCR4-Not complex component, Not1 TRIF-NTD PF17798.1 BAM39552.1 - 0.076 13.1 0.1 0.27 11.3 0.1 1.9 2 0 0 2 2 2 0 TRIF N-terminal domain CNOT1_CAF1_bind PF16415.5 BAM39553.1 - 7.9e-73 244.6 1.4 7.9e-73 244.6 1.4 2.0 2 0 0 2 2 2 1 CCR4-NOT transcription complex subunit 1 CAF1-binding domain CNOT1_TTP_bind PF16417.5 BAM39553.1 - 4.8e-41 140.0 0.9 1.3e-40 138.6 0.4 1.9 2 0 0 2 2 2 1 CCR4-NOT transcription complex subunit 1 TTP binding domain DUF3819 PF12842.7 BAM39553.1 - 9.4e-37 126.2 3.7 9.4e-37 126.2 3.7 2.5 4 0 0 4 4 4 1 Domain of unknown function (DUF3819) Peptidase_S66C PF17676.1 BAM39553.1 - 0.14 12.7 0.0 0.86 10.1 0.0 2.3 2 0 0 2 2 2 0 LD-carboxypeptidase C-terminal domain Striatin PF08232.12 BAM39553.1 - 0.18 12.4 1.3 0.21 12.1 0.1 1.7 2 0 0 2 2 2 0 Striatin family zf-CHY PF05495.12 BAM39554.1 - 1.7e-11 44.5 15.7 1.7e-11 44.5 15.7 3.5 3 0 0 3 3 3 1 CHY zinc finger Myb_DNA-binding PF00249.31 BAM39554.1 - 4.8e-07 29.9 0.2 9.2e-07 29.0 0.2 1.5 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 BAM39554.1 - 0.00077 19.7 0.1 0.0021 18.3 0.1 1.8 1 0 0 1 1 1 1 Myb-like DNA-binding domain BAMBI PF06211.12 BAM39555.1 - 7.9 6.8 8.2 2.5 8.4 4.5 2.0 2 0 0 2 2 2 0 BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain HBM PF16591.5 BAM39556.1 - 0.049 13.0 1.0 0.22 10.9 1.2 1.9 2 0 0 2 2 2 0 Helical bimodular sensor domain CREPT PF16566.5 BAM39556.1 - 0.17 12.0 6.6 1.6 8.9 2.0 2.9 2 0 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour DUF848 PF05852.11 BAM39556.1 - 0.19 11.9 5.1 0.072 13.2 1.3 2.2 2 0 0 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) SPT16 PF08644.11 BAM39556.1 - 1.4 9.1 6.3 0.5 10.5 1.8 2.6 2 0 0 2 2 2 0 FACT complex subunit (SPT16/CDC68) DnaJ PF00226.31 BAM39557.1 - 0.0024 18.0 0.5 0.015 15.4 0.1 2.4 2 1 0 2 2 2 1 DnaJ domain SNARE_assoc PF09335.11 BAM39558.1 - 3.6e-25 88.8 10.4 6.9e-25 87.9 10.4 1.5 1 0 0 1 1 1 1 SNARE associated Golgi protein Sugar_tr PF00083.24 BAM39559.1 - 4.5e-49 167.5 16.8 5.6e-49 167.2 16.8 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter ubiquitin PF00240.23 BAM39561.1 - 5.6e-35 118.9 0.3 7.4e-35 118.5 0.3 1.2 1 0 0 1 1 1 1 Ubiquitin family Ribosomal_L40e PF01020.17 BAM39561.1 - 2.5e-30 104.1 11.4 3.9e-30 103.5 11.4 1.3 1 0 0 1 1 1 1 Ribosomal L40e family Rad60-SLD PF11976.8 BAM39561.1 - 5.8e-17 61.3 0.4 7.9e-17 60.9 0.4 1.2 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 BAM39561.1 - 6e-06 26.6 0.1 2.1e-05 24.9 0.1 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain TBK1_ULD PF18396.1 BAM39561.1 - 0.0036 17.2 0.0 0.0048 16.8 0.0 1.2 1 0 0 1 1 1 1 TANK binding kinase 1 ubiquitin-like domain Rad60-SLD_2 PF13881.6 BAM39561.1 - 0.0052 16.9 0.0 0.013 15.6 0.0 1.7 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 BAM39561.1 - 0.0065 16.8 0.0 0.011 16.1 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_4 PF18036.1 BAM39561.1 - 0.024 14.7 0.7 6.9 6.8 0.0 2.2 2 0 0 2 2 2 0 Ubiquitin-like domain DUF2407 PF10302.9 BAM39561.1 - 0.058 14.0 0.0 0.074 13.6 0.0 1.3 1 1 0 1 1 1 0 DUF2407 ubiquitin-like domain Fer2_3 PF13085.6 BAM39561.1 - 1.2 9.2 5.1 69 3.5 4.2 2.5 1 1 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain TFIIE_alpha PF02002.17 BAM39562.1 - 0.0017 18.2 6.3 0.023 14.6 4.4 3.1 2 1 0 2 2 2 1 TFIIE alpha subunit HTH_20 PF12840.7 BAM39562.1 - 0.0036 17.3 0.0 0.01 15.8 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 BAM39562.1 - 0.01 15.4 0.0 0.023 14.2 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding GntR PF00392.21 BAM39562.1 - 0.011 15.3 0.1 0.019 14.6 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_5 PF01022.20 BAM39562.1 - 0.035 14.0 1.3 0.071 13.0 0.1 2.1 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family DUF2250 PF10007.9 BAM39562.1 - 0.089 12.9 0.3 0.27 11.4 0.3 1.9 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) TGT PF01702.18 BAM39563.1 - 6.1e-137 456.5 0.0 8.4e-137 456.0 0.0 1.0 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase Pkinase PF00069.25 BAM39564.1 - 2.4e-79 266.4 1.4 3.1e-79 266.1 1.4 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM39564.1 - 8.6e-42 143.2 0.1 1.2e-41 142.7 0.1 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_1 PF00036.32 BAM39564.1 - 2.6e-24 82.9 10.2 1.3e-07 30.7 0.3 4.8 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 BAM39564.1 - 2.6e-20 72.6 9.2 5e-11 42.9 1.4 3.3 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 BAM39564.1 - 8.8e-20 68.9 12.7 1.3e-05 24.8 0.1 4.9 4 1 1 5 5 5 3 EF-hand domain EF-hand_8 PF13833.6 BAM39564.1 - 1.4e-19 69.7 8.9 1.7e-07 31.0 0.6 5.1 4 1 1 5 5 5 4 EF-hand domain pair EF-hand_5 PF13202.6 BAM39564.1 - 1.6e-16 58.9 12.4 4.3e-05 22.8 0.4 4.6 4 0 0 4 4 4 3 EF hand Kinase-like PF14531.6 BAM39564.1 - 1.2e-07 31.3 0.0 9.3e-07 28.4 0.0 2.1 2 1 0 2 2 2 1 Kinase-like Pkinase_fungal PF17667.1 BAM39564.1 - 2.6e-05 23.2 0.0 4.9e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 BAM39564.1 - 0.00039 19.8 0.1 0.0012 18.3 0.0 1.8 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family SPARC_Ca_bdg PF10591.9 BAM39564.1 - 0.00054 20.3 0.8 0.82 10.0 0.2 2.7 1 1 1 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region APH PF01636.23 BAM39564.1 - 0.0063 16.5 0.0 0.044 13.7 0.0 2.1 1 1 1 2 2 2 1 Phosphotransferase enzyme family FTA2 PF13095.6 BAM39564.1 - 0.0084 15.8 0.9 0.97 9.0 0.0 2.4 2 0 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 EF-hand_4 PF12763.7 BAM39564.1 - 1.2 9.2 3.8 16 5.5 0.7 3.6 2 2 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand Hydrolase_3 PF08282.12 BAM39565.1 - 2.1e-31 109.6 0.2 2.5e-17 63.4 0.0 2.0 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 BAM39565.1 - 1.6e-05 24.9 0.0 0.28 11.3 0.0 3.3 3 1 0 3 3 3 2 Haloacid dehalogenase-like hydrolase S6PP PF05116.13 BAM39565.1 - 0.082 12.4 0.0 2.6 7.5 0.0 2.2 2 0 0 2 2 2 0 Sucrose-6F-phosphate phosphohydrolase Hydrolase_3 PF08282.12 BAM39568.1 - 7.5e-39 134.0 9.4 1.6e-34 119.8 8.4 2.1 2 0 0 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.13 BAM39568.1 - 7.9e-10 38.7 0.0 0.00013 21.6 0.0 3.4 4 0 0 4 4 4 2 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 BAM39568.1 - 1.4e-05 25.5 0.0 6.6e-05 23.3 0.0 2.1 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 BAM39568.1 - 0.0022 18.1 2.0 0.013 15.5 2.0 2.3 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 BAM39568.1 - 0.0086 16.2 0.1 0.27 11.4 0.0 2.9 3 0 0 3 3 3 1 Haloacid dehalogenase-like hydrolase Proteasome_A_N PF10584.9 BAM39568.1 - 0.08 12.6 0.0 0.16 11.7 0.0 1.5 1 0 0 1 1 1 0 Proteasome subunit A N-terminal signature Hydrolase_3 PF08282.12 BAM39569.1 - 3.2e-34 118.8 2.6 4e-34 118.5 2.6 1.1 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 BAM39569.1 - 5.5e-06 26.1 0.0 0.00017 21.2 0.0 2.7 3 0 0 3 3 3 1 Sucrose-6F-phosphate phosphohydrolase Hydrolase PF00702.26 BAM39569.1 - 0.00017 22.0 0.0 0.0047 17.2 0.0 2.2 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 BAM39569.1 - 0.0022 18.1 0.1 0.016 15.3 0.0 2.1 2 0 0 2 2 2 1 Haloacid dehalogenase-like hydrolase Ndc80_HEC PF03801.13 BAM39569.1 - 0.083 12.5 0.6 0.14 11.7 0.6 1.3 1 0 0 1 1 1 0 HEC/Ndc80p family Hydrolase_6 PF13344.6 BAM39569.1 - 0.11 12.7 0.0 0.28 11.3 0.0 1.7 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase SieB PF14163.6 BAM39569.1 - 0.12 11.8 1.3 0.22 11.0 1.3 1.3 1 0 0 1 1 1 0 Super-infection exclusion protein B Hydrolase_3 PF08282.12 BAM39570.1 - 5.3e-35 121.4 1.9 5.3e-35 121.4 1.9 3.3 2 1 1 3 3 3 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 BAM39570.1 - 1.7e-06 27.8 0.0 0.013 15.1 0.0 2.5 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase ATP-gua_Ptrans PF00217.19 BAM39570.1 - 0.0085 15.6 0.0 0.02 14.4 0.0 1.5 1 0 0 1 1 1 1 ATP:guanido phosphotransferase, C-terminal catalytic domain DUF4888 PF16229.5 BAM39570.1 - 0.32 11.0 4.3 0.34 10.9 0.5 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4888) Syntaxin_2 PF14523.6 BAM39570.1 - 8.9 6.8 9.2 2.9 8.3 0.3 3.8 3 1 0 3 3 3 0 Syntaxin-like protein NAP PF00956.18 BAM39571.1 - 1.9e-16 60.1 5.6 1.5e-12 47.3 0.3 2.6 1 1 1 2 2 2 2 Nucleosome assembly protein (NAP) Mst1_SARAH PF11629.8 BAM39571.1 - 0.07 13.2 3.2 0.67 10.1 3.2 2.3 1 1 0 1 1 1 0 C terminal SARAH domain of Mst1 Ins_P5_2-kin PF06090.12 BAM39571.1 - 0.079 12.4 0.1 0.093 12.1 0.1 1.1 1 0 0 1 1 1 0 Inositol-pentakisphosphate 2-kinase GTP_EFTU PF00009.27 BAM39573.1 - 1.5e-54 184.5 0.1 3e-54 183.5 0.1 1.5 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 BAM39573.1 - 1.1e-16 60.7 0.0 8e-16 57.8 0.0 2.4 2 0 0 2 2 2 1 Elongation factor G C-terminus EFG_II PF14492.6 BAM39573.1 - 6.2e-07 29.4 0.0 1.6e-06 28.1 0.0 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II GTP_EFTU_D2 PF03144.25 BAM39573.1 - 7.3e-06 26.3 0.0 2e-05 24.9 0.0 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 BAM39573.1 - 0.0055 16.8 0.1 0.028 14.5 0.1 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase dCache_3 PF14827.6 BAM39573.1 - 0.033 13.8 0.0 0.063 12.9 0.0 1.4 1 0 0 1 1 1 0 Double sensory domain of two-component sensor kinase EFG_IV PF03764.18 BAM39573.1 - 0.072 12.9 0.0 0.18 11.6 0.0 1.6 1 0 0 1 1 1 0 Elongation factor G, domain IV Cir_N PF10197.9 BAM39574.1 - 7.8e-12 45.2 10.0 7.8e-12 45.2 10.0 2.5 2 1 0 2 2 2 1 N-terminal domain of CBF1 interacting co-repressor CIR Slu7 PF11708.8 BAM39574.1 - 2.8e-06 27.3 0.3 2.8e-06 27.3 0.3 2.3 1 1 1 2 2 2 1 Pre-mRNA splicing Prp18-interacting factor TagA PF12561.8 BAM39574.1 - 0.094 13.1 0.3 8.2 6.9 0.4 2.1 2 0 0 2 2 2 0 ToxR activated gene A lipoprotein domain DUF5401 PF17380.2 BAM39574.1 - 0.62 8.1 13.3 0.77 7.8 13.3 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5401) DUF3520 PF12034.8 BAM39574.1 - 3.9 7.6 7.2 10 6.2 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3520) PDCD2_C PF04194.13 BAM39575.1 - 1.3e-29 103.5 6.4 7.3e-29 101.1 3.1 2.2 2 0 0 2 2 2 1 Programmed cell death protein 2, C-terminal putative domain PhnA_Zn_Ribbon PF08274.12 BAM39575.1 - 0.0046 16.9 1.2 3.9 7.5 0.1 3.4 2 1 0 2 2 2 2 PhnA Zinc-Ribbon Vps36-NZF-N PF16988.5 BAM39575.1 - 0.52 9.8 0.0 0.52 9.8 0.0 3.5 5 0 0 5 5 5 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain zf-RRN7 PF11781.8 BAM39575.1 - 6.2 6.6 9.4 0.75 9.5 0.2 3.4 4 0 0 4 4 4 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 WD40 PF00400.32 BAM39577.1 - 2e-21 75.9 5.2 1.9e-05 25.3 0.0 5.4 5 0 0 5 5 5 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM39577.1 - 4.6e-09 36.5 0.1 0.0021 18.3 0.0 4.0 3 2 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 BAM39577.1 - 0.035 14.0 0.0 0.14 12.0 0.0 2.0 1 1 1 2 2 2 0 Eukaryotic translation initiation factor eIF2A Aminotran_5 PF00266.19 BAM39579.1 - 3e-113 378.6 0.0 3.4e-113 378.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 BAM39579.1 - 3.3e-11 43.0 0.1 6.5e-11 42.0 0.1 1.5 1 1 0 1 1 1 1 Aminotransferase class I and II SHMT PF00464.19 BAM39579.1 - 0.00045 18.9 0.0 0.00081 18.1 0.0 1.4 1 0 0 1 1 1 1 Serine hydroxymethyltransferase DegT_DnrJ_EryC1 PF01041.17 BAM39579.1 - 0.0021 17.5 0.1 0.0037 16.6 0.1 1.3 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family Beta_elim_lyase PF01212.21 BAM39579.1 - 0.0046 16.3 0.0 0.0065 15.8 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Cas_APE2256 PF09651.10 BAM39579.1 - 0.15 11.9 0.5 5 7.0 0.0 2.9 3 0 0 3 3 3 0 CRISPR-associated protein (Cas_APE2256) NAD_kinase PF01513.21 BAM39580.1 - 4.2e-08 32.7 0.0 0.0011 18.3 0.0 2.7 3 0 0 3 3 3 2 ATP-NAD kinase EF1_GNE PF00736.19 BAM39582.1 - 1.2e-26 92.7 1.2 1.2e-26 92.7 1.2 2.1 2 0 0 2 2 2 1 EF-1 guanine nucleotide exchange domain PBP1_TM PF14812.6 BAM39582.1 - 0.27 11.6 9.5 0.31 11.4 0.9 2.2 2 0 0 2 2 2 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Cwf_Cwc_15 PF04889.12 BAM39582.1 - 8.8 6.0 10.4 1.4 8.6 0.8 2.1 2 0 0 2 2 2 0 Cwf15/Cwc15 cell cycle control protein Kinesin PF00225.23 BAM39583.1 - 8e-87 291.3 7.0 8e-87 291.3 7.0 2.0 2 0 0 2 2 2 1 Kinesin motor domain Microtub_bd PF16796.5 BAM39583.1 - 3.1e-21 75.9 0.1 1.3e-20 73.9 0.1 2.2 1 0 0 1 1 1 1 Microtubule binding Flavodoxin_3 PF12641.7 BAM39583.1 - 0.016 14.9 0.7 0.016 14.9 0.7 3.0 2 1 0 2 2 2 0 Flavodoxin domain Pro_isomerase PF00160.21 BAM39584.1 - 1.4e-35 122.9 0.1 2.2e-35 122.3 0.1 1.2 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Mito_carr PF00153.27 BAM39585.1 - 2.5e-32 110.7 7.1 1.2e-16 60.4 0.1 3.3 3 0 0 3 3 3 3 Mitochondrial carrier protein ATP_bind_1 PF03029.17 BAM39586.1 - 2.5e-57 194.5 1.7 5.6e-57 193.3 1.7 1.6 1 1 0 1 1 1 1 Conserved hypothetical ATP binding protein AAA_31 PF13614.6 BAM39586.1 - 6.4e-05 22.9 0.4 0.017 15.1 0.3 2.6 2 1 0 2 2 2 1 AAA domain MipZ PF09140.11 BAM39586.1 - 0.00013 21.4 0.0 0.0002 20.8 0.0 1.2 1 0 0 1 1 1 1 ATPase MipZ AAA_22 PF13401.6 BAM39586.1 - 0.00013 22.3 0.0 0.00031 21.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 BAM39586.1 - 0.00029 20.8 0.9 0.0005 20.0 0.2 1.7 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 BAM39586.1 - 0.00032 20.7 2.6 0.00052 20.1 0.9 2.3 2 1 0 2 2 2 1 AAA domain SRP54 PF00448.22 BAM39586.1 - 0.00052 19.7 0.1 0.0067 16.1 0.1 2.4 3 0 0 3 3 3 1 SRP54-type protein, GTPase domain MobB PF03205.14 BAM39586.1 - 0.00059 19.7 0.4 0.0034 17.3 0.1 2.3 2 1 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B Pox_A32 PF04665.12 BAM39586.1 - 0.00074 19.0 0.0 0.0018 17.8 0.0 1.6 1 0 0 1 1 1 1 Poxvirus A32 protein CbiA PF01656.23 BAM39586.1 - 0.0013 18.8 0.0 0.0022 18.1 0.0 1.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain MeaB PF03308.16 BAM39586.1 - 0.0021 17.1 0.0 0.0034 16.4 0.0 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB NACHT PF05729.12 BAM39586.1 - 0.0024 17.8 0.0 0.0045 16.9 0.0 1.4 1 0 0 1 1 1 1 NACHT domain NTPase_1 PF03266.15 BAM39586.1 - 0.0025 17.7 0.2 0.03 14.2 0.2 2.3 1 1 0 1 1 1 1 NTPase AAA_16 PF13191.6 BAM39586.1 - 0.0032 17.9 0.0 0.0043 17.4 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_7 PF12775.7 BAM39586.1 - 0.0046 16.5 0.0 0.0086 15.6 0.0 1.5 1 0 0 1 1 1 1 P-loop containing dynein motor region Viral_helicase1 PF01443.18 BAM39586.1 - 0.0055 16.5 0.0 0.032 14.0 0.0 2.0 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase TrwB_AAD_bind PF10412.9 BAM39586.1 - 0.0095 14.9 0.0 0.019 13.9 0.0 1.4 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain cobW PF02492.19 BAM39586.1 - 0.017 14.7 0.5 0.064 12.8 0.2 2.3 2 1 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Roc PF08477.13 BAM39586.1 - 0.022 15.0 0.1 0.083 13.1 0.0 2.0 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_30 PF13604.6 BAM39586.1 - 0.024 14.4 0.0 0.04 13.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 BAM39586.1 - 0.026 14.3 0.3 0.053 13.2 0.0 1.6 2 0 0 2 2 2 0 AAA domain CLP1_P PF16575.5 BAM39586.1 - 0.038 13.8 0.1 0.15 11.8 0.0 2.1 2 1 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop DUF87 PF01935.17 BAM39586.1 - 0.044 13.9 0.0 0.11 12.6 0.0 1.6 1 0 0 1 1 1 0 Helicase HerA, central domain AAA_19 PF13245.6 BAM39586.1 - 0.055 13.8 0.0 0.11 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 BAM39586.1 - 0.068 12.2 0.0 0.1 11.7 0.0 1.2 1 0 0 1 1 1 0 Type II/IV secretion system protein ResIII PF04851.15 BAM39586.1 - 0.07 13.1 0.2 0.29 11.1 0.1 2.0 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit FtsK_SpoIIIE PF01580.18 BAM39586.1 - 0.071 12.4 0.1 0.29 10.4 0.0 2.0 2 1 1 3 3 3 0 FtsK/SpoIIIE family DUF1987 PF09345.10 BAM39586.1 - 0.075 12.7 0.5 0.22 11.2 0.1 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1987) AAA_33 PF13671.6 BAM39586.1 - 0.075 13.2 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 BAM39586.1 - 0.086 12.1 0.0 0.14 11.4 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin DUF463 PF04317.12 BAM39586.1 - 0.15 11.0 0.0 0.38 9.6 0.0 1.7 2 0 0 2 2 2 0 YcjX-like family, DUF463 PseudoU_synth_1 PF01416.20 BAM39587.1 - 1.3e-16 61.0 0.1 1.6e-14 54.3 0.0 2.6 2 1 0 2 2 2 1 tRNA pseudouridine synthase DUF2344 PF10105.9 BAM39587.1 - 0.0076 16.1 4.7 0.013 15.4 3.9 1.9 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2344) Nup54 PF13874.6 BAM39587.1 - 0.044 13.9 2.0 12 6.0 0.3 3.4 3 0 0 3 3 3 0 Nucleoporin complex subunit 54 DUF3139 PF11337.8 BAM39587.1 - 0.52 11.0 5.9 9.7 6.9 0.4 3.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3139) ABC_membrane PF00664.23 BAM39587.1 - 1 9.0 3.9 0.97 9.0 0.3 2.1 2 0 0 2 2 2 0 ABC transporter transmembrane region Pro_isomerase PF00160.21 BAM39588.1 - 5.4e-41 140.5 0.1 6.2e-41 140.3 0.1 1.0 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ArfGap PF01412.18 BAM39589.1 - 4.8e-27 94.4 0.0 8.6e-27 93.5 0.0 1.4 1 0 0 1 1 1 1 Putative GTPase activating protein for Arf zf-piccolo PF05715.13 BAM39589.1 - 0.21 11.8 0.7 0.43 10.8 0.7 1.5 1 0 0 1 1 1 0 Piccolo Zn-finger Pkinase PF00069.25 BAM39590.1 - 0.062 12.7 0.6 0.095 12.1 0.6 1.3 1 0 0 1 1 1 0 Protein kinase domain Myosin_head PF00063.21 BAM39592.1 - 3.4e-159 531.2 22.6 1.1e-127 427.1 14.5 2.2 1 1 1 2 2 2 2 Myosin head (motor domain) RCC1 PF00415.18 BAM39592.1 - 3.6e-20 72.3 8.5 3.4e-06 27.6 0.0 6.5 6 2 0 6 6 6 3 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 BAM39592.1 - 9.1e-19 66.8 5.3 0.00014 21.5 0.0 4.8 4 0 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat IQ PF00612.27 BAM39592.1 - 3.9e-14 51.1 20.1 0.0024 17.5 0.0 6.4 6 0 0 6 6 6 4 IQ calmodulin-binding motif Myosin_N PF02736.19 BAM39592.1 - 1.4e-05 24.8 0.9 3.3e-05 23.6 0.9 1.7 1 0 0 1 1 1 1 Myosin N-terminal SH3-like domain AAA_22 PF13401.6 BAM39592.1 - 0.011 16.0 0.0 0.037 14.3 0.0 1.9 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 BAM39592.1 - 0.11 13.0 0.4 1.4 9.4 0.1 2.7 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 BAM39592.1 - 0.19 12.1 0.0 0.45 10.9 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain PqiA PF04403.13 BAM39593.1 - 1.5e-12 47.6 15.0 6e-07 29.4 8.9 3.4 2 1 0 2 2 2 2 Paraquat-inducible protein A DUF241 PF03087.14 BAM39593.1 - 0.082 12.7 2.4 0.1 12.4 0.8 2.0 2 0 0 2 2 2 0 Arabidopsis protein of unknown function zf-C3HC4_3 PF13920.6 BAM39595.1 - 2.3e-12 46.6 15.8 2.3e-12 46.6 15.8 2.6 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 BAM39595.1 - 4.8e-05 23.1 15.0 4.8e-05 23.1 15.0 2.3 3 0 0 3 3 3 1 Prokaryotic RING finger family 4 zf-RING_2 PF13639.6 BAM39595.1 - 0.00022 21.5 13.4 0.00022 21.5 13.4 2.7 2 0 0 2 2 2 1 Ring finger domain zf-RING_5 PF14634.6 BAM39595.1 - 0.018 15.0 10.6 0.018 15.0 10.6 2.4 2 0 0 2 2 2 0 zinc-RING finger domain DUF1644 PF07800.12 BAM39595.1 - 5 7.2 16.0 0.94 9.5 3.1 3.3 1 1 3 4 4 4 0 Protein of unknown function (DUF1644) SL4P PF17618.2 BAM39597.1 - 0.066 13.3 0.3 0.61 10.2 0.1 2.2 2 0 0 2 2 2 0 Uncharacterized Strongylid L4 protein Cpn60_TCP1 PF00118.24 BAM39599.1 - 3.8e-152 507.4 12.7 4.3e-152 507.2 12.7 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family PucR PF07905.11 BAM39599.1 - 0.0043 17.3 0.0 0.011 16.0 0.0 1.7 1 0 0 1 1 1 1 Purine catabolism regulatory protein-like family RPAP2_Rtr1 PF04181.13 BAM39600.1 - 7.9e-13 48.5 4.3 7.9e-13 48.5 4.3 2.2 2 0 0 2 2 2 1 Rtr1/RPAP2 family zf-RING_6 PF14835.6 BAM39600.1 - 0.0055 16.5 0.0 0.013 15.4 0.0 1.5 1 0 0 1 1 1 1 zf-RING of BARD1-type protein Rpp20 PF12328.8 BAM39605.1 - 2.2e-05 24.5 0.1 0.0038 17.2 0.0 2.5 2 1 0 2 2 2 2 Rpp20 subunit of nuclear RNase MRP and P Alba PF01918.21 BAM39605.1 - 0.041 13.7 0.0 0.081 12.8 0.0 1.5 1 0 0 1 1 1 0 Alba Presenilin PF01080.17 BAM39605.1 - 1.1 7.9 3.8 1 8.0 0.1 2.0 1 1 1 2 2 2 0 Presenilin PAC3 PF10178.9 BAM39606.1 - 0.00085 19.4 0.0 0.0056 16.8 0.0 2.0 1 1 0 1 1 1 1 Proteasome assembly chaperone 3 SH3_1 PF00018.28 BAM39607.1 - 0.023 14.3 0.3 0.22 11.2 0.0 2.3 2 0 0 2 2 2 0 SH3 domain T6PP_N PF18572.1 BAM39608.1 - 0.068 13.0 0.3 0.068 13.0 0.3 3.2 4 1 0 4 4 4 0 Trehalose-6-phosphate phosphatase N-terminal helical bundle domain EZH2_WD-Binding PF11616.8 BAM39608.1 - 0.25 11.5 0.2 0.25 11.5 0.2 2.9 3 0 0 3 3 3 0 WD repeat binding protein EZH2 Chordopox_A13L PF05961.11 BAM39608.1 - 3.8 7.8 5.8 1.8 8.9 0.1 3.5 3 0 0 3 3 3 0 Chordopoxvirus A13L protein Ribosomal_L1 PF00687.21 BAM39609.1 - 5e-15 55.8 5.2 5e-15 55.8 5.2 1.9 2 0 0 2 2 2 1 Ribosomal protein L1p/L10e family DUF2462 PF09495.10 BAM39609.1 - 1.3 9.8 6.2 4.5 8.1 2.9 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF2462) WD40 PF00400.32 BAM39610.1 - 2.1e-25 88.5 8.1 0.00023 21.9 0.0 7.3 7 0 0 7 7 7 6 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM39610.1 - 5.5e-13 49.0 0.0 0.038 14.3 0.0 6.3 1 1 6 7 7 7 7 Anaphase-promoting complex subunit 4 WD40 domain Vps16_C PF04840.12 BAM39611.1 - 1.1e-16 60.8 4.2 3.4e-15 55.9 3.9 2.5 1 1 0 1 1 1 1 Vps16, C-terminal region Vps16_N PF04841.13 BAM39611.1 - 3e-14 52.6 0.1 2.6e-07 29.8 0.0 2.5 2 0 0 2 2 2 2 Vps16, N-terminal region Peptidase_M41 PF01434.18 BAM39612.1 - 7.1e-53 179.3 0.2 1.3e-52 178.4 0.2 1.5 1 0 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 BAM39612.1 - 1.4e-39 135.6 0.1 3.9e-39 134.1 0.0 1.9 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 BAM39612.1 - 6.3e-14 51.5 0.0 1.7e-13 50.1 0.0 1.7 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 BAM39612.1 - 3.4e-05 24.3 0.1 0.0031 17.9 0.0 2.5 1 1 1 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 BAM39612.1 - 0.00011 22.2 0.1 0.00043 20.3 0.1 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 BAM39612.1 - 0.00047 20.4 0.3 0.017 15.4 0.3 3.0 1 1 1 2 2 2 1 AAA domain Mg_chelatase PF01078.21 BAM39612.1 - 0.00057 19.3 0.1 0.0014 18.0 0.1 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 BAM39612.1 - 0.0043 16.9 0.0 0.011 15.6 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 BAM39612.1 - 0.0057 16.4 0.0 0.027 14.2 0.0 2.1 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 BAM39612.1 - 0.011 15.9 0.4 0.066 13.3 0.1 2.4 2 1 0 2 2 2 0 AAA domain (Cdc48 subfamily) Zeta_toxin PF06414.12 BAM39612.1 - 0.011 15.0 0.3 0.029 13.7 0.1 1.7 2 0 0 2 2 2 0 Zeta toxin TIP49 PF06068.13 BAM39612.1 - 0.014 14.6 0.0 0.03 13.5 0.0 1.5 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_30 PF13604.6 BAM39612.1 - 0.019 14.7 1.2 0.036 13.8 0.4 1.8 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.13 BAM39612.1 - 0.032 13.4 0.0 0.072 12.2 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF815) AAA_7 PF12775.7 BAM39612.1 - 0.035 13.6 0.1 0.11 12.0 0.0 1.9 2 0 0 2 2 1 0 P-loop containing dynein motor region AAA_28 PF13521.6 BAM39612.1 - 0.036 14.3 0.0 0.078 13.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 BAM39612.1 - 0.047 13.6 0.1 0.094 12.6 0.1 1.5 1 0 0 1 1 1 0 NACHT domain PIF1 PF05970.14 BAM39612.1 - 0.05 12.8 0.1 0.089 11.9 0.1 1.3 1 0 0 1 1 1 0 PIF1-like helicase RNA_helicase PF00910.22 BAM39612.1 - 0.05 14.0 0.0 0.16 12.4 0.0 1.9 1 0 0 1 1 1 0 RNA helicase IstB_IS21 PF01695.17 BAM39612.1 - 0.055 13.2 0.1 0.12 12.1 0.1 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_33 PF13671.6 BAM39612.1 - 0.069 13.3 0.2 0.2 11.8 0.2 1.9 1 1 0 1 1 1 0 AAA domain OAD_gamma PF04277.13 BAM39612.1 - 0.078 13.6 0.2 0.17 12.5 0.2 1.5 1 0 0 1 1 1 0 Oxaloacetate decarboxylase, gamma chain Sigma54_activat PF00158.26 BAM39612.1 - 0.11 12.2 0.0 0.3 10.8 0.0 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_18 PF13238.6 BAM39612.1 - 0.12 12.9 0.1 0.36 11.4 0.1 1.8 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 BAM39612.1 - 0.14 11.7 0.1 0.35 10.4 0.1 1.6 1 0 0 1 1 1 0 AAA domain Lipoprotein_19 PF13617.6 BAM39612.1 - 0.21 11.4 1.3 0.64 9.9 1.3 1.8 1 0 0 1 1 1 0 YnbE-like lipoprotein DsrD PF08679.11 BAM39612.1 - 0.36 11.1 1.6 0.68 10.2 0.1 2.3 2 0 0 2 2 1 0 Dissimilatory sulfite reductase D (DsrD) HK PF02110.15 BAM39613.1 - 1.3e-05 24.7 0.0 1.9e-05 24.2 0.0 1.2 1 0 0 1 1 1 1 Hydroxyethylthiazole kinase family DNA_gyraseB PF00204.25 BAM39614.1 - 5.2e-41 140.0 1.1 1.2e-40 138.9 0.8 1.8 2 0 0 2 2 2 1 DNA gyrase B DNA_gyraseB_C PF00986.21 BAM39614.1 - 1.3e-24 86.2 0.3 2.4e-24 85.3 0.3 1.5 1 0 0 1 1 1 1 DNA gyrase B subunit, carboxyl terminus Toprim PF01751.22 BAM39614.1 - 1.5e-17 63.7 0.1 1e-16 61.0 0.0 2.6 3 0 0 3 3 3 1 Toprim domain HATPase_c PF02518.26 BAM39614.1 - 5e-13 49.5 0.0 1.7e-11 44.6 0.0 3.3 3 1 0 3 3 3 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SSXT PF05030.12 BAM39614.1 - 0.11 12.2 0.2 0.11 12.2 0.2 2.3 2 0 0 2 2 2 0 SSXT protein (N-terminal region) DUF637 PF04830.13 BAM39614.1 - 0.44 10.3 3.7 13 5.6 0.1 2.4 2 0 0 2 2 2 0 Possible hemagglutinin (DUF637) ACDC PF14733.6 BAM39616.1 - 2.2e-14 53.5 0.0 5.8e-14 52.2 0.0 1.7 1 0 0 1 1 1 1 AP2-coincident C-terminal AP2 PF00847.20 BAM39616.1 - 8e-12 45.2 1.6 2.1e-11 43.9 1.6 1.7 1 0 0 1 1 1 1 AP2 domain DpnI_C PF17726.1 BAM39616.1 - 0.022 14.9 0.3 0.22 11.7 0.0 2.8 3 0 0 3 3 3 0 Dam-replacing HTH domain Ribosomal_L23 PF00276.20 BAM39617.1 - 2.8e-13 50.0 0.7 4.9e-13 49.3 0.2 1.6 2 0 0 2 2 2 1 Ribosomal protein L23 FAD_syn PF06574.12 BAM39617.1 - 0.17 11.8 0.0 1.8 8.5 0.0 2.1 2 0 0 2 2 2 0 FAD synthetase PLDc_2 PF13091.6 BAM39619.1 - 1.4e-14 54.1 1.7 1.1e-06 28.6 0.0 2.8 3 0 0 3 3 3 2 PLD-like domain PLDc PF00614.22 BAM39619.1 - 0.62 10.3 6.5 0.44 10.8 0.1 3.3 3 1 0 3 3 3 0 Phospholipase D Active site motif PI3K_P85_iSH2 PF16454.5 BAM39620.1 - 0.071 12.7 12.6 0.027 14.1 1.8 2.4 2 0 0 2 2 2 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Sec8_exocyst PF04048.14 BAM39620.1 - 0.14 12.0 3.5 5.2 7.0 0.3 2.2 2 0 0 2 2 2 0 Sec8 exocyst complex component specific domain LMBR1 PF04791.16 BAM39620.1 - 1.1 8.0 7.5 1.3 7.8 7.5 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein Orf78 PF06024.12 BAM39620.1 - 5.1 7.5 7.2 0.75 10.1 2.5 2.1 3 0 0 3 3 3 0 Orf78 (ac78) SNF2_N PF00176.23 BAM39621.1 - 1.8e-62 211.1 5.1 3e-62 210.4 0.5 2.4 2 0 0 2 2 2 2 SNF2 family N-terminal domain Helicase_C PF00271.31 BAM39621.1 - 6.8e-19 68.2 0.0 4.7e-18 65.6 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain YycC PF14174.6 BAM39621.1 - 0.17 11.7 1.9 21 5.0 0.1 2.9 2 0 0 2 2 2 0 YycC-like protein OMPdecase PF00215.24 BAM39622.1 - 2.8e-23 82.7 0.0 3.5e-23 82.4 0.0 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family PRORP PF16953.5 BAM39623.1 - 6.1e-11 42.3 0.0 6.2e-09 35.7 0.0 2.4 2 0 0 2 2 2 2 Protein-only RNase P RNase_Zc3h12a PF11977.8 BAM39623.1 - 0.0012 18.6 2.6 0.0085 15.9 0.0 3.0 3 0 0 3 3 3 1 Zc3h12a-like Ribonuclease NYN domain zf-C3H2C3 PF17122.5 BAM39624.1 - 0.047 13.7 0.6 0.14 12.2 0.6 1.7 1 0 0 1 1 1 0 Zinc-finger UFD1 PF03152.14 BAM39625.1 - 1.9e-26 92.5 0.5 3.8e-24 85.1 0.5 2.2 2 0 0 2 2 2 2 Ubiquitin fusion degradation protein UFD1 UAA PF08449.11 BAM39626.1 - 1.7e-37 129.3 25.0 9.7e-37 126.8 25.0 1.9 1 1 0 1 1 1 1 UAA transporter family EamA PF00892.20 BAM39626.1 - 1.1e-08 35.4 28.8 2.7e-08 34.1 13.7 2.8 3 1 0 3 3 3 2 EamA-like transporter family ubiquitin PF00240.23 BAM39627.1 - 3.2e-16 58.9 0.2 1.1e-14 54.0 0.2 2.2 1 1 0 1 1 1 1 Ubiquitin family UBA PF00627.31 BAM39627.1 - 2.1e-06 27.5 0.2 4.5e-06 26.4 0.2 1.6 1 0 0 1 1 1 1 UBA/TS-N domain Rad60-SLD PF11976.8 BAM39627.1 - 1.5e-05 24.7 0.1 5.1e-05 23.0 0.1 1.9 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 BAM39627.1 - 0.00028 21.3 0.0 0.00053 20.4 0.0 1.3 1 0 0 1 1 1 1 Ubiquitin-like domain HOIP-UBA PF16678.5 BAM39627.1 - 0.0092 16.0 0.0 0.032 14.2 0.0 1.8 2 0 0 2 2 2 1 HOIP UBA domain pair CUE PF02845.16 BAM39627.1 - 0.021 14.5 1.4 0.15 11.8 0.1 2.4 2 0 0 2 2 2 0 CUE domain XPC-binding PF09280.11 BAM39627.1 - 0.11 12.2 0.3 0.11 12.2 0.3 3.1 2 1 0 2 2 2 0 XPC-binding domain STI1 PF17830.1 BAM39627.1 - 0.13 12.2 10.4 1.2 9.1 0.8 3.6 1 1 2 3 3 3 0 STI1 domain Ubiquitin_4 PF18036.1 BAM39627.1 - 0.21 11.6 0.0 0.68 10.0 0.0 1.8 1 1 0 1 1 1 0 Ubiquitin-like domain TPR_1 PF00515.28 BAM39628.1 - 1e-14 53.6 0.2 0.00041 20.1 0.0 3.2 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 BAM39628.1 - 4.4e-08 32.6 0.0 0.17 12.1 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_19 PF14559.6 BAM39628.1 - 1.4e-06 28.7 0.1 9.2e-05 22.9 0.0 2.4 1 1 1 2 2 2 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 BAM39628.1 - 1.1e-05 25.4 0.1 0.00029 20.8 0.0 2.8 2 1 1 3 3 3 1 Fis1 C-terminal tetratricopeptide repeat TPR_8 PF13181.6 BAM39628.1 - 5.8e-05 23.0 0.3 2.9 8.3 0.0 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 BAM39628.1 - 0.0021 18.3 0.0 4.6 7.6 0.0 3.1 1 1 2 3 3 3 2 Tetratricopeptide repeat ANAPC3 PF12895.7 BAM39628.1 - 0.013 15.7 0.3 1.7 8.9 0.1 2.3 2 0 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_14 PF13428.6 BAM39628.1 - 0.039 14.8 0.0 8.6 7.5 0.0 3.0 2 1 1 3 3 3 0 Tetratricopeptide repeat YccV-like PF08755.11 BAM39628.1 - 0.14 12.7 0.5 1.5 9.4 0.0 2.1 1 1 0 2 2 2 0 Hemimethylated DNA-binding protein YccV like TPR_11 PF13414.6 BAM39628.1 - 0.15 11.8 0.5 12 5.7 0.0 3.0 3 1 1 4 4 4 0 TPR repeat AP2 PF00847.20 BAM39629.1 - 5.7e-08 32.9 0.0 8.6e-06 25.9 0.1 2.5 2 0 0 2 2 2 2 AP2 domain DSPc PF00782.20 BAM39630.1 - 1.8e-07 31.0 0.0 3.7e-07 30.0 0.0 1.5 1 1 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 BAM39630.1 - 0.00092 18.8 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 Protein-tyrosine phosphatase PTPlike_phytase PF14566.6 BAM39630.1 - 0.03 14.4 0.0 0.06 13.5 0.0 1.4 1 1 0 1 1 1 0 Inositol hexakisphosphate Acylphosphatase PF00708.18 BAM39631.1 - 9.5e-23 80.4 0.3 1.1e-22 80.3 0.3 1.0 1 0 0 1 1 1 1 Acylphosphatase DUF2871 PF11070.8 BAM39631.1 - 0.17 12.2 0.0 0.25 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2871) DNA_ligase_A_M PF01068.21 BAM39632.1 - 0.017 14.7 0.1 0.038 13.6 0.1 1.6 1 0 0 1 1 1 0 ATP dependent DNA ligase domain Exo_endo_phos PF03372.23 BAM39634.1 - 0.028 14.0 0.0 0.096 12.2 0.0 1.8 1 1 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family Fmp27_GFWDK PF10347.9 BAM39635.1 - 0.028 14.5 0.7 0.041 14.0 0.7 1.2 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain TackOD1 PF18551.1 BAM39635.1 - 0.058 13.1 0.2 0.12 12.0 0.2 1.5 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 NRN1 PF15056.6 BAM39635.1 - 0.063 13.4 0.0 0.13 12.4 0.0 1.5 1 0 0 1 1 1 0 Neuritin protein family GPI2 PF06432.11 BAM39636.1 - 0.079 12.4 1.1 0.16 11.4 0.2 1.8 1 1 1 2 2 2 0 Phosphatidylinositol N-acetylglucosaminyltransferase GPI2 PF06432.11 BAM39637.1 - 1.5e-09 37.8 9.0 1.5e-09 37.7 9.0 1.0 1 0 0 1 1 1 1 Phosphatidylinositol N-acetylglucosaminyltransferase LGT PF01790.18 BAM39637.1 - 0.00049 19.4 0.6 0.00051 19.4 0.6 1.1 1 0 0 1 1 1 1 Prolipoprotein diacylglyceryl transferase Fig1 PF12351.8 BAM39637.1 - 0.0092 15.9 3.4 0.011 15.7 3.4 1.1 1 0 0 1 1 1 1 Ca2+ regulator and membrane fusion protein Fig1 CcmD PF04995.14 BAM39637.1 - 0.033 14.3 0.2 0.071 13.2 0.2 1.5 1 0 0 1 1 1 0 Heme exporter protein D (CcmD) DUF2116 PF09889.9 BAM39637.1 - 4.2 7.4 5.4 3.3 7.8 1.0 2.2 1 1 1 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) DEAD PF00270.29 BAM39638.1 - 2.8e-14 53.3 0.0 7.1e-14 52.0 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM39638.1 - 3.8e-07 30.4 0.7 4.8e-06 26.9 0.1 2.9 2 1 1 3 3 3 1 Helicase conserved C-terminal domain AAA_22 PF13401.6 BAM39638.1 - 0.031 14.6 0.1 6 7.1 0.1 3.5 4 0 0 4 4 4 0 AAA domain SatD PF16264.5 BAM39638.1 - 0.037 13.6 0.3 0.13 11.8 0.2 2.0 2 0 0 2 2 2 0 SatD family (SatD) Syja_N PF02383.18 BAM39639.1 - 1.1e-55 189.2 2.4 1.8e-55 188.5 2.4 1.3 1 0 0 1 1 1 1 SacI homology domain Exo_endo_phos PF03372.23 BAM39639.1 - 2.7e-07 30.3 0.1 5e-07 29.5 0.1 1.5 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Peptidase_M18 PF02127.15 BAM39640.1 - 1.7e-121 406.0 0.0 2e-121 405.8 0.0 1.0 1 0 0 1 1 1 1 Aminopeptidase I zinc metalloprotease (M18) Peptidase_M42 PF05343.14 BAM39640.1 - 0.0012 17.9 0.0 0.035 13.1 0.0 2.1 2 0 0 2 2 2 2 M42 glutamyl aminopeptidase CLPTM1 PF05602.12 BAM39641.1 - 1.4e-66 225.3 36.3 4.7e-47 161.0 22.4 3.0 2 1 0 2 2 2 2 Cleft lip and palate transmembrane protein 1 (CLPTM1) PQ-loop PF04193.14 BAM39641.1 - 2.8e-06 27.0 1.7 0.019 14.7 0.2 3.0 2 0 0 2 2 2 2 PQ loop repeat Cyt_bd_oxida_II PF02322.15 BAM39641.1 - 0.021 14.2 5.6 0.037 13.4 5.6 1.3 1 0 0 1 1 1 0 Cytochrome bd terminal oxidase subunit II Stevor PF17410.2 BAM39641.1 - 0.073 12.6 4.2 0.18 11.3 4.2 1.7 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame FtsH_ext PF06480.15 BAM39641.1 - 0.093 13.1 2.2 0.43 10.9 2.2 2.3 1 0 0 1 1 1 0 FtsH Extracellular Fmp27_SW PF10305.9 BAM39641.1 - 0.5 11.1 3.3 0.86 10.3 0.6 2.7 3 0 0 3 3 3 0 RNA pol II promoter Fmp27 protein domain Vpu PF00558.19 BAM39641.1 - 2.2 8.1 4.9 1.5 8.6 0.4 3.1 2 0 0 2 2 2 0 Vpu protein DnaJ PF00226.31 BAM39642.1 - 9e-23 80.2 1.5 2.2e-22 78.9 0.6 2.1 2 0 0 2 2 2 1 DnaJ domain DUF1977 PF09320.11 BAM39642.1 - 4.4e-06 26.9 3.4 4.4e-06 26.9 3.4 2.7 2 1 0 2 2 2 1 Domain of unknown function (DUF1977) DUF4149 PF13664.6 BAM39642.1 - 0.032 14.6 0.0 0.06 13.7 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4149) HemY_N PF07219.13 BAM39642.1 - 0.042 14.1 0.0 10 6.3 0.1 2.6 2 0 0 2 2 2 0 HemY protein N-terminus TPR_2 PF07719.17 BAM39642.1 - 0.08 13.1 0.4 0.74 10.1 0.1 2.8 2 0 0 2 2 2 0 Tetratricopeptide repeat EMC3_TMCO1 PF01956.16 BAM39642.1 - 1.3 8.7 5.2 2.2 8.0 0.0 2.6 2 1 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like RAP PF08373.10 BAM39644.1 - 3.5e-15 55.8 0.8 3.5e-15 55.8 0.8 2.3 2 0 0 2 2 2 1 RAP domain Sod_Fe_C PF02777.18 BAM39645.1 - 2.7e-32 111.0 1.7 2.7e-32 111.0 1.7 3.0 2 2 1 3 3 3 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 BAM39645.1 - 2.2e-29 101.7 1.3 2.2e-29 101.7 1.3 1.9 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, alpha-hairpin domain DDHD PF02862.17 BAM39646.1 - 5.4e-38 131.4 0.1 9.6e-38 130.6 0.1 1.4 1 0 0 1 1 1 1 DDHD domain DUF4427 PF14468.6 BAM39646.1 - 0.02 15.0 0.1 0.048 13.7 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF4427) AAA PF00004.29 BAM39647.1 - 1.4e-85 284.4 0.0 3.8e-48 163.3 0.0 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 BAM39647.1 - 2.7e-28 97.5 0.4 6e-13 48.4 0.1 2.7 2 0 0 2 2 2 2 AAA+ lid domain AAA_5 PF07728.14 BAM39647.1 - 7.6e-15 55.1 0.0 3.4e-05 23.8 0.0 4.6 3 2 0 3 3 3 2 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 BAM39647.1 - 4.7e-13 49.2 0.0 2.1e-05 24.3 0.0 3.2 3 1 0 3 3 3 2 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 BAM39647.1 - 6.9e-12 46.1 0.3 0.0043 17.5 0.0 4.6 2 2 0 4 4 4 2 AAA ATPase domain AAA_2 PF07724.14 BAM39647.1 - 1.2e-10 41.8 0.1 0.00058 20.0 0.0 3.4 3 0 0 3 3 3 2 AAA domain (Cdc48 subfamily) AAA_33 PF13671.6 BAM39647.1 - 2.9e-10 40.5 0.0 0.00067 19.8 0.0 2.7 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 BAM39647.1 - 2.4e-09 36.9 0.3 0.0007 18.9 0.0 2.7 2 1 0 2 2 2 2 TIP49 P-loop domain AAA_18 PF13238.6 BAM39647.1 - 6.7e-09 36.4 0.4 0.003 18.1 0.0 3.7 4 0 0 4 4 3 2 AAA domain IstB_IS21 PF01695.17 BAM39647.1 - 8.6e-08 32.1 0.0 0.016 15.0 0.0 3.0 3 0 0 3 3 3 2 IstB-like ATP binding protein AAA_22 PF13401.6 BAM39647.1 - 8.9e-08 32.5 2.2 0.1 12.9 0.0 4.9 3 2 2 5 5 5 2 AAA domain Vps4_C PF09336.10 BAM39647.1 - 1.2e-07 31.6 0.8 0.00058 19.8 0.0 3.1 3 0 0 3 3 3 2 Vps4 C terminal oligomerisation domain AAA_14 PF13173.6 BAM39647.1 - 1.4e-07 31.6 0.0 0.00083 19.4 0.0 2.9 2 0 0 2 2 2 2 AAA domain ABC_tran PF00005.27 BAM39647.1 - 3e-07 31.0 6.1 0.0014 19.1 0.0 3.1 3 2 0 3 3 2 2 ABC transporter Sigma54_activat PF00158.26 BAM39647.1 - 3.2e-07 30.2 0.1 0.2 11.3 0.0 3.9 3 1 1 4 4 4 2 Sigma-54 interaction domain RNA_helicase PF00910.22 BAM39647.1 - 6.1e-07 29.8 0.0 0.012 16.0 0.0 2.9 2 0 0 2 2 2 2 RNA helicase AAA_28 PF13521.6 BAM39647.1 - 1.2e-06 28.9 0.0 0.033 14.4 0.0 2.6 2 0 0 2 2 2 2 AAA domain Nucleolin_bd PF16725.5 BAM39647.1 - 1.3e-06 28.0 0.1 3.2e-06 26.7 0.1 1.7 1 0 0 1 1 1 1 Nucleolin binding domain Mg_chelatase PF01078.21 BAM39647.1 - 1.3e-06 27.9 0.6 0.023 14.1 0.1 2.9 3 0 0 3 3 3 2 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 BAM39647.1 - 3.4e-06 27.0 0.0 0.0094 15.8 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) DUF815 PF05673.13 BAM39647.1 - 3.8e-06 26.3 0.0 0.021 14.0 0.0 2.6 3 0 0 3 3 2 2 Protein of unknown function (DUF815) TsaE PF02367.17 BAM39647.1 - 2.6e-05 24.2 0.0 0.039 14.0 0.0 2.4 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 BAM39647.1 - 4.6e-05 23.4 0.2 0.26 11.2 0.0 2.8 3 0 0 3 3 2 2 NACHT domain NB-ARC PF00931.22 BAM39647.1 - 6.1e-05 22.3 0.0 0.045 12.9 0.0 2.8 2 1 0 2 2 2 1 NB-ARC domain AAA_17 PF13207.6 BAM39647.1 - 6.6e-05 23.4 0.1 0.44 11.0 0.0 3.0 2 0 0 2 2 2 2 AAA domain Parvo_NS1 PF01057.17 BAM39647.1 - 9.8e-05 21.6 0.0 0.47 9.5 0.0 2.5 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 Zeta_toxin PF06414.12 BAM39647.1 - 0.00017 20.9 0.1 0.56 9.4 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin Viral_helicase1 PF01443.18 BAM39647.1 - 0.00019 21.3 0.0 0.35 10.6 0.0 2.6 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase CPT PF07931.12 BAM39647.1 - 0.0002 21.2 0.0 0.018 14.9 0.0 2.4 2 0 0 2 2 2 1 Chloramphenicol phosphotransferase-like protein AAA_25 PF13481.6 BAM39647.1 - 0.00068 19.3 0.8 1.5 8.4 0.0 3.4 3 1 1 4 4 3 1 AAA domain AAA_11 PF13086.6 BAM39647.1 - 0.00091 19.1 7.3 2.8 7.7 0.0 3.5 3 0 0 3 3 3 1 AAA domain AAA_24 PF13479.6 BAM39647.1 - 0.001 18.9 0.1 0.37 10.5 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 BAM39647.1 - 0.0014 18.2 0.1 0.51 9.8 0.0 2.5 2 0 0 2 2 2 1 P-loop containing dynein motor region Sigma54_activ_2 PF14532.6 BAM39647.1 - 0.002 18.3 0.0 1 9.5 0.0 2.6 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_23 PF13476.6 BAM39647.1 - 0.0024 18.4 10.0 12 6.3 0.0 3.8 3 0 0 3 3 3 0 AAA domain NTPase_1 PF03266.15 BAM39647.1 - 0.0029 17.5 0.0 0.61 10.0 0.0 2.8 2 0 0 2 2 2 1 NTPase SKI PF01202.22 BAM39647.1 - 0.0037 17.4 0.7 9.1 6.4 0.0 3.9 4 0 0 4 4 3 0 Shikimate kinase AAA_29 PF13555.6 BAM39647.1 - 0.0041 16.8 0.1 0.25 11.1 0.0 2.4 2 0 0 2 2 2 1 P-loop containing region of AAA domain Cytidylate_kin2 PF13189.6 BAM39647.1 - 0.0052 16.9 0.0 1.8 8.6 0.0 2.8 3 0 0 3 3 2 1 Cytidylate kinase-like family ATPase_2 PF01637.18 BAM39647.1 - 0.0082 16.1 5.4 0.35 10.8 0.0 3.9 3 1 1 4 4 3 1 ATPase domain predominantly from Archaea Rad17 PF03215.15 BAM39647.1 - 0.0084 16.0 2.9 0.7 9.8 0.2 3.4 3 2 0 3 3 2 1 Rad17 P-loop domain SMC_N PF02463.19 BAM39647.1 - 0.0089 15.5 0.1 4.3 6.7 0.0 3.5 3 0 0 3 3 3 0 RecF/RecN/SMC N terminal domain Prion PF00377.18 BAM39647.1 - 0.012 15.5 0.1 7.3 6.5 0.0 2.7 2 0 0 2 2 2 0 Prion/Doppel alpha-helical domain PIF1 PF05970.14 BAM39647.1 - 0.019 14.2 0.1 1.8 7.7 0.1 2.8 1 1 1 2 2 2 0 PIF1-like helicase Cytidylate_kin PF02224.18 BAM39647.1 - 0.026 14.3 0.1 1.8 8.2 0.0 2.7 2 0 0 2 2 2 0 Cytidylate kinase AAA_19 PF13245.6 BAM39647.1 - 0.044 14.1 0.1 9.7 6.5 0.0 2.8 2 0 0 2 2 2 0 AAA domain Bac_DnaA PF00308.18 BAM39647.1 - 0.045 13.6 0.1 1.5 8.6 0.0 3.1 3 0 0 3 3 3 0 Bacterial dnaA protein ATPase PF06745.13 BAM39647.1 - 0.053 12.9 6.1 2.3 7.5 0.0 4.4 6 0 0 6 6 5 0 KaiC MMR_HSR1 PF01926.23 BAM39647.1 - 0.054 13.6 0.1 12 6.0 0.0 2.9 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_30 PF13604.6 BAM39647.1 - 0.063 13.0 0.2 8.5 6.0 0.0 2.4 2 0 0 2 2 2 0 AAA domain Sigma70_ner PF04546.13 BAM39647.1 - 0.4 10.5 7.3 1 9.2 7.3 1.7 1 0 0 1 1 1 0 Sigma-70, non-essential region DUF3464 PF11947.8 BAM39647.1 - 0.5 10.1 3.9 0.96 9.2 3.9 1.4 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 Hydin_ADK PF17213.3 BAM39647.1 - 2.6 8.3 6.5 19 5.4 0.0 3.4 3 0 0 3 3 3 0 Hydin Adenylate kinase-like domain Helicase_C PF00271.31 BAM39649.1 - 8.2e-11 42.2 0.0 2.3e-10 40.8 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain GUCT PF08152.12 BAM39649.1 - 0.00013 22.2 0.0 0.0004 20.6 0.0 1.8 2 0 0 2 2 2 1 GUCT (NUC152) domain GATase PF00117.28 BAM39651.1 - 1.8e-10 40.9 0.0 1.5e-08 34.6 0.0 2.4 2 1 0 2 2 2 2 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 BAM39651.1 - 8.3e-05 22.4 0.0 0.0043 16.8 0.0 2.3 2 0 0 2 2 2 1 Peptidase C26 GATase_3 PF07685.14 BAM39651.1 - 0.0021 17.7 0.0 0.0035 17.0 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DUF4916 PF16262.5 BAM39651.1 - 0.11 12.0 0.0 0.88 9.0 0.0 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4916) MFS_1 PF07690.16 BAM39652.1 - 7.7e-26 90.8 32.9 7.7e-26 90.8 32.9 1.5 2 0 0 2 2 2 1 Major Facilitator Superfamily DUF3817 PF12823.7 BAM39652.1 - 1.1 10.1 0.0 1.1 10.1 0.0 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF3817) TMEM100 PF16311.5 BAM39652.1 - 1.2 8.7 0.0 1.2 8.7 0.0 3.6 4 0 0 4 4 4 0 Transmembrane protein 100 MFS_1 PF07690.16 BAM39653.1 - 2.4e-23 82.7 28.6 2.4e-23 82.7 28.6 2.7 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 BAM39653.1 - 0.0044 15.9 27.3 0.013 14.4 8.8 2.9 1 1 2 3 3 3 2 MFS_1 like family CPP1-like PF11833.8 BAM39653.1 - 9.1 5.9 8.9 4.8 6.8 5.4 2.3 1 1 1 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like SUV3_C PF12513.8 BAM39655.1 - 1.1e-11 44.5 0.1 5.3e-11 42.3 0.1 2.3 2 0 0 2 2 2 1 Mitochondrial degradasome RNA helicase subunit C terminal Helicase_C PF00271.31 BAM39655.1 - 1.1e-10 41.8 0.0 3.2e-10 40.3 0.0 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain SF1-HH PF16275.5 BAM39656.1 - 1.8e-29 102.4 0.1 1.8e-29 102.4 0.1 2.9 2 1 0 2 2 2 1 Splicing factor 1 helix-hairpin domain KH_1 PF00013.29 BAM39656.1 - 1e-07 31.6 0.1 2.5e-07 30.4 0.1 1.7 1 0 0 1 1 1 1 KH domain zf-CCHC PF00098.23 BAM39656.1 - 2.6e-06 27.2 10.0 0.013 15.6 0.1 2.4 2 0 0 2 2 2 2 Zinc knuckle zf-CCHC_3 PF13917.6 BAM39656.1 - 0.0021 18.0 3.6 0.33 11.0 0.7 2.6 1 1 1 2 2 2 2 Zinc knuckle DnaJ_CXXCXGXG PF00684.19 BAM39656.1 - 0.017 15.5 3.2 0.056 13.8 3.2 1.9 1 0 0 1 1 1 0 DnaJ central domain zf-CCHC_4 PF14392.6 BAM39656.1 - 0.3 10.9 7.7 4.3 7.1 0.4 2.5 2 0 0 2 2 2 0 Zinc knuckle zf-CCHC_6 PF15288.6 BAM39656.1 - 4.7 7.1 8.7 4.5 7.2 0.7 2.6 2 0 0 2 2 2 0 Zinc knuckle Pkinase PF00069.25 BAM39657.1 - 5.2e-37 127.7 0.0 3.6e-28 98.6 0.1 2.5 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 BAM39657.1 - 1e-20 74.1 0.0 6.7e-16 58.3 0.1 3.1 2 1 0 2 2 2 2 Protein tyrosine kinase Kdo PF06293.14 BAM39657.1 - 0.0059 16.0 0.0 0.015 14.6 0.0 1.7 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 BAM39657.1 - 0.021 14.7 0.0 0.062 13.2 0.0 1.7 1 0 0 1 1 1 0 Phosphotransferase enzyme family TMEM108 PF15759.5 BAM39657.1 - 0.044 12.8 1.5 0.082 11.9 1.5 1.3 1 0 0 1 1 1 0 TMEM108 family DUF4834 PF16118.5 BAM39657.1 - 0.19 12.7 0.0 0.19 12.7 0.0 6.4 7 0 0 7 7 7 0 Domain of unknown function (DUF4834) zf-U1 PF06220.12 BAM39658.1 - 5.5e-19 67.6 2.7 7.2e-19 67.3 2.7 1.2 1 0 0 1 1 1 1 U1 zinc finger Tom22 PF04281.13 BAM39659.1 - 0.0032 17.2 0.0 0.0037 17.1 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial import receptor subunit Tom22 Hydrolase_4 PF12146.8 BAM39660.1 - 1.8e-12 47.1 0.1 2.2e-11 43.5 0.0 2.5 2 1 0 2 2 2 1 Serine aminopeptidase, S33 FAINT PF04385.15 BAM39660.1 - 1.7e-10 40.8 25.3 2.1e-05 24.5 0.1 5.2 5 0 0 5 5 5 3 Domain of unknown function, DUF529 LpxB PF02684.15 BAM39660.1 - 0.13 11.1 0.1 0.23 10.3 0.1 1.3 1 0 0 1 1 1 0 Lipid-A-disaccharide synthetase FliE PF02049.18 BAM39660.1 - 0.2 11.8 0.0 0.36 11.0 0.0 1.3 1 0 0 1 1 1 0 Flagellar hook-basal body complex protein FliE PWI PF01480.17 BAM39661.1 - 0.016 15.5 1.4 0.25 11.7 0.1 2.7 3 1 0 3 3 3 0 PWI domain Nbl1_Borealin_N PF10444.9 BAM39661.1 - 0.029 14.0 0.2 0.095 12.4 0.0 2.0 2 0 0 2 2 2 0 Nbl1 / Borealin N terminal Prp18 PF02840.15 BAM39662.1 - 6.6e-55 185.1 0.6 6.6e-55 185.1 0.6 3.0 3 0 0 3 3 3 1 Prp18 domain NARP1 PF12569.8 BAM39662.1 - 1e-33 117.1 18.5 5.6e-29 101.4 8.0 4.6 4 1 0 4 4 3 2 NMDA receptor-regulated protein 1 TPR_2 PF07719.17 BAM39662.1 - 1.6e-12 46.5 21.4 0.0046 17.0 1.7 7.7 8 0 0 8 8 7 4 Tetratricopeptide repeat PRP4 PF08799.11 BAM39662.1 - 1.2e-11 43.9 0.3 3.1e-11 42.6 0.3 1.7 1 0 0 1 1 1 1 pre-mRNA processing factor 4 (PRP4) like TPR_1 PF00515.28 BAM39662.1 - 2e-11 43.2 14.0 0.00024 20.8 0.0 6.8 7 0 0 7 7 7 2 Tetratricopeptide repeat TPR_14 PF13428.6 BAM39662.1 - 1.7e-10 40.8 0.1 1.2 10.1 0.1 6.2 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_8 PF13181.6 BAM39662.1 - 1e-09 37.8 8.4 0.01 16.0 0.0 6.9 7 0 0 7 7 6 3 Tetratricopeptide repeat TPR_11 PF13414.6 BAM39662.1 - 1.2e-08 34.5 4.7 0.00093 18.8 0.0 4.4 5 0 0 5 5 5 2 TPR repeat TPR_12 PF13424.6 BAM39662.1 - 1.1e-06 28.8 5.3 0.19 12.0 0.0 4.8 4 1 0 4 4 4 2 Tetratricopeptide repeat TPR_17 PF13431.6 BAM39662.1 - 3.6e-06 27.0 0.1 0.41 11.1 0.0 5.5 5 0 0 5 5 5 1 Tetratricopeptide repeat TPR_9 PF13371.6 BAM39662.1 - 8.2e-06 25.9 0.1 0.017 15.3 0.0 4.4 4 1 0 4 4 4 1 Tetratricopeptide repeat TPR_16 PF13432.6 BAM39662.1 - 1.5e-05 25.6 0.0 5.4 7.7 0.1 4.0 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_15 PF13429.6 BAM39662.1 - 0.00011 21.6 2.9 0.53 9.5 0.4 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 BAM39662.1 - 0.00039 20.9 6.9 6 7.7 0.4 5.2 5 0 0 5 5 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 BAM39662.1 - 0.00047 20.6 5.7 5 7.7 0.0 4.9 5 0 0 5 5 5 2 Tetratricopeptide repeat TPR_7 PF13176.6 BAM39662.1 - 0.0014 18.5 0.4 24 5.3 0.0 5.6 6 0 0 6 6 5 0 Tetratricopeptide repeat TPR_MalT PF17874.1 BAM39662.1 - 0.0054 16.1 0.0 4.2 6.6 0.1 2.5 2 0 0 2 2 2 2 MalT-like TPR region TPR_3 PF07720.12 BAM39662.1 - 0.0058 16.6 2.5 0.084 12.9 0.8 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 BAM39662.1 - 0.0074 16.3 5.0 6.3 7.0 0.1 5.0 4 0 0 4 4 4 1 Fis1 C-terminal tetratricopeptide repeat ANAPC3 PF12895.7 BAM39662.1 - 0.67 10.2 17.7 1.5 9.1 5.0 5.2 4 2 1 5 5 5 0 Anaphase-promoting complex, cyclosome, subunit 3 Ldh_1_N PF00056.23 BAM39663.1 - 1.4e-30 106.2 0.4 1.4e-30 106.2 0.4 1.5 2 0 0 2 2 2 1 lactate/malate dehydrogenase, NAD binding domain Ldh_1_C PF02866.18 BAM39663.1 - 5.4e-24 85.0 0.0 9.1e-24 84.3 0.0 1.2 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain Glyco_hydro_4 PF02056.16 BAM39663.1 - 2.7e-05 23.8 0.3 6.5e-05 22.6 0.1 1.7 2 0 0 2 2 2 1 Family 4 glycosyl hydrolase Glyco_hydro_3_C PF01915.22 BAM39663.1 - 0.075 13.0 0.0 0.1 12.6 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 3 C-terminal domain DUF1168 PF06658.12 BAM39664.1 - 1.9e-20 73.0 14.2 2.6e-20 72.6 14.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1168) Peptidase_S49_N PF08496.10 BAM39664.1 - 0.54 10.3 9.3 0.96 9.5 9.3 1.3 1 0 0 1 1 1 0 Peptidase family S49 N-terminal NAD_binding_1 PF00175.21 BAM39665.1 - 1.1e-22 80.7 0.0 1.8e-22 80.1 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 BAM39665.1 - 0.00015 22.1 0.0 0.00021 21.6 0.0 1.3 1 0 0 1 1 1 1 Oxidoreductase FAD-binding domain NAD_binding_6 PF08030.12 BAM39665.1 - 0.00063 19.9 0.1 0.11 12.6 0.0 2.3 1 1 0 2 2 2 2 Ferric reductase NAD binding domain FAD_binding_1 PF00667.20 BAM39665.1 - 0.034 13.7 0.0 0.075 12.6 0.0 1.5 2 0 0 2 2 2 0 FAD binding domain APG6_N PF17675.1 BAM39666.1 - 8.4 6.9 21.6 52 4.4 21.6 2.2 1 1 0 1 1 1 0 Apg6 coiled-coil region FSAP_sig_propep PF03032.15 BAM39667.1 - 0.25 11.4 1.3 0.41 10.7 1.3 1.3 1 0 0 1 1 1 0 Frog skin active peptide family signal and propeptide Acetyltransf_1 PF00583.25 BAM39668.1 - 3.1e-09 37.1 0.0 3.5e-09 36.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 BAM39668.1 - 3e-05 24.0 0.0 4.2e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 BAM39668.1 - 0.00083 19.7 0.0 0.0012 19.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 BAM39668.1 - 0.0014 18.7 0.0 0.0024 17.9 0.0 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain HECT PF00632.25 BAM39669.1 - 1.4e-41 143.0 0.4 5.8e-41 140.9 0.0 2.3 3 0 0 3 3 3 1 HECT-domain (ubiquitin-transferase) Ank_2 PF12796.7 BAM39669.1 - 1.2e-07 32.2 0.1 4.4e-07 30.4 0.1 2.1 1 0 0 1 1 1 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 BAM39669.1 - 0.013 16.1 0.1 0.79 10.4 0.1 3.4 1 1 1 2 2 2 0 Ankyrin repeats (many copies) Ank_5 PF13857.6 BAM39669.1 - 0.016 15.5 0.1 0.13 12.6 0.1 2.8 1 1 2 3 3 3 0 Ankyrin repeats (many copies) Ank_3 PF13606.6 BAM39669.1 - 0.078 13.6 3.3 24 5.9 0.0 4.6 4 0 0 4 4 4 0 Ankyrin repeat Ank PF00023.30 BAM39669.1 - 0.17 12.4 0.1 33 5.2 0.1 3.2 2 0 0 2 2 2 0 Ankyrin repeat UPF0086 PF01868.16 BAM39670.1 - 3.7e-18 65.2 0.0 6e-18 64.6 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function UPF0086 RuvA_N PF01330.21 BAM39670.1 - 0.062 13.4 0.0 0.14 12.3 0.0 1.6 1 0 0 1 1 1 0 RuvA N terminal domain SANT_DAMP1_like PF16282.5 BAM39671.1 - 1.1e-22 80.0 3.3 1.1e-22 80.0 3.3 2.5 3 0 0 3 3 3 1 SANT/Myb-like domain of DAMP1 MetOD2 PF18548.1 BAM39671.1 - 0.018 15.1 2.6 0.1 12.7 2.6 2.3 1 0 0 1 1 1 0 Metanogen output domain 2 DMAP1 PF05499.12 BAM39671.1 - 0.69 9.8 11.7 8.6 6.2 0.0 3.3 2 1 1 3 3 3 0 DNA methyltransferase 1-associated protein 1 (DMAP1) CDP-OH_P_transf PF01066.21 BAM39672.1 - 2.9e-13 50.4 0.1 2.9e-13 50.4 0.1 3.9 4 1 0 4 4 4 1 CDP-alcohol phosphatidyltransferase DUF3464 PF11947.8 BAM39672.1 - 0.067 12.9 0.4 0.2 11.4 0.4 1.8 1 0 0 1 1 1 0 Photosynthesis affected mutant 68 FAINT PF04385.15 BAM39673.1 - 6.6e-14 51.7 19.9 3.3e-06 27.1 0.1 4.7 4 0 0 4 4 4 3 Domain of unknown function, DUF529 Hydrolase_4 PF12146.8 BAM39673.1 - 3.7e-12 46.0 0.0 3.3e-10 39.7 0.0 2.7 2 1 0 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_5 PF12695.7 BAM39673.1 - 0.063 13.0 0.0 1.4 8.6 0.0 2.4 2 0 0 2 2 2 0 Alpha/beta hydrolase family Abhydrolase_4 PF08386.10 BAM39673.1 - 0.14 12.3 0.0 0.27 11.4 0.0 1.4 1 0 0 1 1 1 0 TAP-like protein zf-B_box PF00643.24 BAM39674.1 - 7.6e-09 35.6 15.9 6.2e-06 26.3 4.2 2.6 2 0 0 2 2 2 2 B-box zinc finger PH PF00169.29 BAM39674.1 - 0.0069 16.9 0.0 0.016 15.7 0.0 1.7 1 0 0 1 1 1 1 PH domain zf-UBR PF02207.20 BAM39674.1 - 0.02 15.0 3.5 0.02 15.0 3.5 2.7 2 0 0 2 2 2 0 Putative zinc finger in N-recognin (UBR box) DUF1677 PF07911.13 BAM39674.1 - 0.086 13.2 5.9 3.7 8.0 0.3 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1677) CEBP_ZZ PF16366.5 BAM39674.1 - 3.3 8.0 13.3 0.16 12.3 2.4 2.5 2 0 0 2 2 2 0 Cytoplasmic polyadenylation element-binding protein ZZ domain GTP_EFTU PF00009.27 BAM39675.1 - 2.2e-23 82.8 0.8 3.1e-21 75.8 0.8 2.4 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 BAM39675.1 - 2.8e-11 43.5 0.0 6.7e-11 42.3 0.0 1.7 1 0 0 1 1 1 1 Translation-initiation factor 2 MMR_HSR1 PF01926.23 BAM39675.1 - 9.4e-09 35.4 0.1 1.9e-08 34.4 0.1 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase PduV-EutP PF10662.9 BAM39675.1 - 0.00014 21.6 0.1 0.00038 20.2 0.1 1.8 1 1 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation MMR_HSR1_Xtn PF16897.5 BAM39675.1 - 0.00027 20.9 0.1 0.0015 18.5 0.1 2.3 1 1 0 1 1 1 1 C-terminal region of MMR_HSR1 domain Dynamin_N PF00350.23 BAM39675.1 - 0.00037 20.6 1.3 0.0029 17.7 0.0 2.6 2 1 0 2 2 2 1 Dynamin family SRPRB PF09439.10 BAM39675.1 - 0.0013 18.2 0.0 0.0025 17.2 0.0 1.4 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Roc PF08477.13 BAM39675.1 - 0.008 16.4 0.0 0.019 15.2 0.0 1.7 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase FeoB_N PF02421.18 BAM39675.1 - 0.047 13.2 0.6 0.94 9.0 0.6 2.9 1 1 0 1 1 1 0 Ferrous iron transport protein B MobB PF03205.14 BAM39675.1 - 0.11 12.4 0.1 0.26 11.2 0.1 1.6 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B CWC25 PF12542.8 BAM39676.1 - 8.2e-12 45.9 0.7 8.2e-12 45.9 0.7 3.3 3 2 0 3 3 3 1 Pre-mRNA splicing factor RCC1 PF00415.18 BAM39677.1 - 1.2e-23 83.4 1.8 6.4e-09 36.3 0.0 6.3 6 1 0 6 6 6 4 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 BAM39677.1 - 2.7e-19 68.4 10.3 1.5e-06 27.9 0.1 4.8 4 1 0 4 4 4 4 Regulator of chromosome condensation (RCC1) repeat FeS PF04060.13 BAM39677.1 - 0.33 10.7 0.1 0.33 10.7 0.1 2.0 2 0 0 2 2 2 0 Putative Fe-S cluster Lip_prot_lig_C PF10437.9 BAM39678.1 - 7.4e-09 35.5 0.1 2.5e-08 33.8 0.1 1.9 1 0 0 1 1 1 1 Bacterial lipoate protein ligase C-terminus BPL_LplA_LipB PF03099.19 BAM39678.1 - 2.1e-08 34.2 0.0 4.3e-08 33.1 0.0 1.5 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family Pinin_SDK_memA PF04696.13 BAM39679.1 - 1.8e-18 66.8 9.3 1.8e-18 66.8 9.3 1.9 2 1 0 2 2 2 1 pinin/SDK/memA/ protein conserved region DUF5082 PF16888.5 BAM39679.1 - 0.097 13.0 17.6 0.15 12.3 8.6 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF5082) FOXP-CC PF16159.5 BAM39679.1 - 1.9 9.2 6.0 0.35 11.5 1.7 2.1 2 0 0 2 2 2 0 FOXP coiled-coil domain EMC3_TMCO1 PF01956.16 BAM39679.1 - 2 8.1 4.8 0.49 10.1 1.7 1.6 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like TBCC PF07986.12 BAM39680.1 - 9.5e-27 93.1 2.2 1.7e-26 92.3 2.2 1.4 1 0 0 1 1 1 1 Tubulin binding cofactor C DUF5123 PF17161.4 BAM39680.1 - 0.32 12.1 4.9 0.21 12.7 1.7 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF5123) EMP24_GP25L PF01105.24 BAM39681.1 - 6.2e-28 98.0 0.3 7.3e-28 97.7 0.3 1.1 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD Ribonuc_red_sm PF00268.21 BAM39682.1 - 4.3e-51 174.0 0.4 1.1e-50 172.7 0.4 1.6 1 1 0 1 1 1 1 Ribonucleotide reductase, small chain Wyosine_form PF08608.12 BAM39683.1 - 0.055 13.8 0.2 0.58 10.6 0.0 2.6 2 0 0 2 2 2 0 Wyosine base formation Alpha_Helical PF18489.1 BAM39683.1 - 0.12 12.5 2.6 0.16 12.1 0.6 2.4 2 0 0 2 2 2 0 Alpha helical domain DUF4612 PF15389.6 BAM39683.1 - 5.5 8.1 6.2 3.6 8.7 0.4 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF4612) DUF1664 PF07889.12 BAM39684.1 - 0.021 14.9 0.6 0.18 11.8 0.0 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF1664) CR6_interact PF10147.9 BAM39684.1 - 0.32 10.7 4.9 0.91 9.2 1.6 2.4 3 0 0 3 3 3 0 Growth arrest and DNA-damage-inducible proteins-interacting protein 1 Occludin_ELL PF07303.13 BAM39684.1 - 3.6 8.4 7.7 4 8.2 2.2 3.1 2 1 2 4 4 4 0 Occludin homology domain MDM10 PF12519.8 BAM39685.1 - 0.013 14.4 0.2 0.016 14.1 0.2 1.2 1 0 0 1 1 1 0 Mitochondrial distribution and morphology protein 10 DUF1664 PF07889.12 BAM39685.1 - 0.041 13.9 2.6 0.22 11.5 0.3 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) ILEI PF15711.5 BAM39685.1 - 0.058 13.9 0.2 0.36 11.3 0.1 2.2 2 0 0 2 2 2 0 Interleukin-like EMT inducer Exo_endo_phos PF03372.23 BAM39686.1 - 0.0013 18.3 0.0 0.0024 17.4 0.0 1.5 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family PDEase_I PF00233.19 BAM39687.1 - 2.5e-68 230.4 0.2 4.5e-68 229.5 0.2 1.4 1 0 0 1 1 1 1 3'5'-cyclic nucleotide phosphodiesterase HD PF01966.22 BAM39687.1 - 0.0076 16.5 0.0 0.018 15.2 0.0 1.6 1 0 0 1 1 1 1 HD domain DegS PF05384.11 BAM39687.1 - 0.074 12.5 0.1 0.22 11.0 0.1 1.7 1 0 0 1 1 1 0 Sensor protein DegS RRM_1 PF00076.22 BAM39688.1 - 1.6e-36 123.9 0.2 7.3e-19 67.4 0.0 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) WW PF00397.26 BAM39688.1 - 4.5e-09 36.3 2.8 1e-08 35.1 2.8 1.6 1 0 0 1 1 1 1 WW domain RRM_7 PF16367.5 BAM39688.1 - 2.6e-07 30.7 0.1 0.00018 21.5 0.0 2.8 2 2 0 2 2 2 2 RNA recognition motif Nup35_RRM PF05172.13 BAM39688.1 - 4.2e-05 23.4 0.2 0.056 13.4 0.0 2.3 2 0 0 2 2 2 2 Nup53/35/40-type RNA recognition motif RNA_bind PF08675.11 BAM39688.1 - 5.5e-05 23.1 0.5 0.0042 17.1 0.2 2.9 2 1 0 2 2 2 1 RNA binding domain BRAP2 PF07576.12 BAM39688.1 - 0.0088 16.2 0.0 3.1 8.1 0.0 2.2 2 0 0 2 2 2 2 BRCA1-associated protein 2 Nup35_RRM_2 PF14605.6 BAM39688.1 - 0.012 15.6 0.0 0.96 9.5 0.0 2.3 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif RRM_5 PF13893.6 BAM39688.1 - 0.038 13.6 0.0 0.88 9.2 0.0 2.2 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PHM7_cyt PF14703.6 BAM39688.1 - 0.068 13.4 0.1 2.1 8.5 0.1 2.6 2 1 1 3 3 3 0 Cytosolic domain of 10TM putative phosphate transporter MA3 PF02847.17 BAM39689.1 - 4.1e-21 75.1 1.9 9.8e-21 73.8 1.9 1.7 1 0 0 1 1 1 1 MA3 domain MIF4G PF02854.19 BAM39689.1 - 8.1e-13 48.5 1.1 8.1e-13 48.5 1.1 2.2 3 0 0 3 3 3 1 MIF4G domain Cnd1 PF12717.7 BAM39689.1 - 0.037 14.1 1.6 0.084 12.9 0.2 2.2 2 1 1 3 3 3 0 non-SMC mitotic condensation complex subunit 1 TFIIF_alpha PF05793.12 BAM39689.1 - 1.2 7.6 6.6 2.2 6.7 6.6 1.3 1 0 0 1 1 1 0 Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) Ribosomal_S8 PF00410.19 BAM39690.1 - 5e-18 65.3 0.0 5.8e-18 65.1 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S8 Ras PF00071.22 BAM39691.1 - 2.2e-57 193.2 0.1 2.8e-57 192.8 0.1 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 BAM39691.1 - 3.7e-35 120.7 0.2 6.1e-35 120.0 0.2 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 BAM39691.1 - 6.7e-13 48.5 0.0 8.9e-13 48.1 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 BAM39691.1 - 1.4e-07 31.6 0.1 2.3e-07 30.9 0.1 1.4 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 BAM39691.1 - 2.6e-05 23.8 0.0 0.002 17.7 0.0 2.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain SRPRB PF09439.10 BAM39691.1 - 0.00085 18.8 0.1 0.0018 17.7 0.0 1.6 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit RsgA_GTPase PF03193.16 BAM39691.1 - 0.0017 18.3 0.1 0.62 9.9 0.1 2.3 1 1 1 2 2 2 2 RsgA GTPase Gtr1_RagA PF04670.12 BAM39691.1 - 0.0062 15.9 0.0 0.01 15.2 0.0 1.4 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region FeoB_N PF02421.18 BAM39691.1 - 0.015 14.8 0.1 0.028 13.9 0.1 1.5 1 0 0 1 1 1 0 Ferrous iron transport protein B TniB PF05621.11 BAM39691.1 - 0.052 13.0 0.0 0.11 11.9 0.0 1.5 1 0 0 1 1 1 0 Bacterial TniB protein Peptidase_C97 PF05903.14 BAM39692.1 - 2.4e-34 118.3 0.2 4.6e-34 117.4 0.2 1.4 1 0 0 1 1 1 1 PPPDE putative peptidase domain RRM_1 PF00076.22 BAM39693.1 - 9.1e-31 105.5 0.3 1.8e-14 53.3 0.1 2.5 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 BAM39693.1 - 1.8e-05 24.4 0.0 0.025 14.2 0.0 2.4 1 1 1 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 BAM39693.1 - 8.9e-05 22.5 0.3 0.03 14.3 0.1 2.3 2 0 0 2 2 2 2 RNA binding motif RRM_7 PF16367.5 BAM39693.1 - 0.00079 19.5 0.1 0.005 16.9 0.0 2.3 1 1 1 2 2 2 1 RNA recognition motif Nup35_RRM_2 PF14605.6 BAM39693.1 - 0.016 15.2 0.0 0.041 13.9 0.0 1.7 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif RRM_occluded PF16842.5 BAM39693.1 - 0.089 12.7 0.0 4.7 7.1 0.0 2.2 2 0 0 2 2 2 0 Occluded RNA-recognition motif NPV_P10 PF05531.12 BAM39694.1 - 0.019 15.4 0.9 0.019 15.4 0.9 1.9 2 1 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Dynein_C PF18199.1 BAM39694.1 - 0.034 13.4 1.7 0.04 13.1 1.7 1.1 1 0 0 1 1 1 0 Dynein heavy chain C-terminal domain FRB_dom PF08771.11 BAM39694.1 - 0.19 12.2 2.0 4.1 7.9 0.3 2.3 1 1 1 2 2 2 0 FKBP12-rapamycin binding domain DASH_Dad4 PF08650.10 BAM39694.1 - 1.5 8.8 8.0 0.098 12.6 1.7 2.1 2 0 0 2 2 2 0 DASH complex subunit Dad4 Mito_carr PF00153.27 BAM39696.1 - 4.5e-16 58.6 0.1 5.1e-07 29.5 0.1 2.2 2 0 0 2 2 2 2 Mitochondrial carrier protein DUF3519 PF12033.8 BAM39696.1 - 0.013 15.9 1.9 0.025 15.0 0.2 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3519) DUF3139 PF11337.8 BAM39696.1 - 0.5 11.1 4.4 1.4 9.6 0.3 2.9 1 1 2 3 3 3 0 Protein of unknown function (DUF3139) SRP_SPB PF02978.19 BAM39697.1 - 0.02 15.5 0.0 0.05 14.2 0.0 1.8 1 0 0 1 1 1 0 Signal peptide binding domain Retrotran_gag_2 PF14223.6 BAM39697.1 - 0.089 12.5 0.5 0.16 11.6 0.5 1.5 1 0 0 1 1 1 0 gag-polypeptide of LTR copia-type COQ9 PF08511.11 BAM39697.1 - 0.096 12.5 2.3 0.69 9.7 0.1 2.6 3 0 0 3 3 3 0 COQ9 Importin_rep_6 PF18829.1 BAM39697.1 - 0.097 12.8 0.1 2.5 8.3 0.1 2.4 1 1 1 2 2 2 0 Importin repeat 6 tRNA-synt_1g PF09334.11 BAM39698.1 - 4.9e-68 229.7 0.0 4.4e-36 124.5 0.0 2.3 1 1 1 2 2 2 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 BAM39698.1 - 2.3e-11 42.7 0.0 1.4e-09 36.8 0.0 2.7 2 1 1 3 3 3 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 BAM39698.1 - 9.4e-07 28.5 0.0 0.00016 21.1 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain UTP25 PF06862.12 BAM39699.1 - 1.3e-125 419.9 7.2 1.3e-125 419.9 7.2 1.4 2 0 0 2 2 2 1 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 Rad1 PF02144.16 BAM39699.1 - 0.036 13.1 0.1 0.061 12.4 0.1 1.3 1 0 0 1 1 1 0 Repair protein Rad1/Rec1/Rad17 zf-RING_2 PF13639.6 BAM39700.1 - 2.9e-13 49.9 6.8 2.9e-13 49.9 6.8 2.2 2 0 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 BAM39700.1 - 6.6e-09 35.5 7.0 6.6e-09 35.5 7.0 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 BAM39700.1 - 8.1e-09 35.6 8.8 8.1e-09 35.6 8.8 2.5 2 1 0 2 2 2 1 RING-H2 zinc finger domain zf-RING_11 PF17123.5 BAM39700.1 - 2.1e-08 33.8 2.8 2.1e-08 33.8 2.8 2.2 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 BAM39700.1 - 3.5e-06 26.8 6.5 3.5e-06 26.8 6.5 2.4 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 BAM39700.1 - 4.9e-06 26.5 0.8 1.4e-05 25.1 0.8 1.8 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 BAM39700.1 - 2.9e-05 24.0 2.3 2.9e-05 24.0 2.3 2.2 2 1 0 2 2 2 1 RING-type zinc-finger FANCL_C PF11793.8 BAM39700.1 - 3.7e-05 23.8 11.8 6e-05 23.1 4.0 2.6 2 1 0 2 2 2 1 FANCL C-terminal domain zf-C3HC4_3 PF13920.6 BAM39700.1 - 0.0015 18.3 2.7 0.0015 18.3 2.7 2.6 2 1 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 BAM39700.1 - 0.0016 18.3 4.9 0.0016 18.3 4.9 2.7 2 2 1 3 3 3 1 zinc-RING finger domain zinc_ribbon_9 PF14369.6 BAM39700.1 - 0.0089 16.3 1.2 0.0089 16.3 1.2 3.1 3 0 0 3 3 3 1 zinc-ribbon ATG11 PF10377.9 BAM39700.1 - 0.055 13.5 0.0 0.12 12.4 0.0 1.5 1 0 0 1 1 1 0 Autophagy-related protein 11 Rad50_zn_hook PF04423.14 BAM39700.1 - 0.079 12.8 1.1 0.25 11.2 0.0 2.2 2 0 0 2 2 2 0 Rad50 zinc hook motif zf-Nse PF11789.8 BAM39700.1 - 0.096 12.5 3.1 0.2 11.5 3.1 1.5 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit CTU2 PF10288.9 BAM39700.1 - 0.14 12.4 4.3 0.35 11.1 1.0 2.8 2 1 0 2 2 2 0 Cytoplasmic tRNA 2-thiolation protein 2 zf-HC5HC2H_2 PF13832.6 BAM39700.1 - 0.32 11.2 6.9 0.098 12.8 1.7 2.3 2 0 0 2 2 2 0 PHD-zinc-finger like domain Cytochrom_CIII PF02085.16 BAM39700.1 - 0.66 10.4 8.2 0.77 10.1 1.1 2.5 2 0 0 2 2 2 0 Class III cytochrome C family zf-HC5HC2H PF13771.6 BAM39700.1 - 3.1 8.1 9.8 0.25 11.6 1.6 2.6 2 1 0 2 2 2 0 PHD-like zinc-binding domain zf-RING-like PF08746.11 BAM39700.1 - 4.4 7.7 10.7 0.29 11.5 5.1 2.1 2 1 0 2 2 1 0 RING-like domain Prok-RING_4 PF14447.6 BAM39700.1 - 9.6 6.2 15.8 0.59 10.0 7.5 2.7 2 2 1 3 3 3 0 Prokaryotic RING finger family 4 MCM6_C PF18263.1 BAM39701.1 - 5.3e-06 26.6 0.0 6.1e-06 26.4 0.0 1.1 1 0 0 1 1 1 1 MCM6 C-terminal winged-helix domain Cyclin_N PF00134.23 BAM39702.1 - 1.9e-09 37.3 0.7 4e-09 36.3 0.3 1.8 2 0 0 2 2 2 1 Cyclin, N-terminal domain Cyclin_C PF02984.19 BAM39702.1 - 0.00043 20.4 0.4 0.0018 18.3 0.0 2.1 2 1 0 2 2 2 1 Cyclin, C-terminal domain TFIIB PF00382.19 BAM39702.1 - 0.007 16.4 0.4 0.19 11.8 0.0 2.4 2 0 0 2 2 2 1 Transcription factor TFIIB repeat FAINT PF04385.15 BAM39704.1 - 3.4e-06 27.0 0.5 5.4e-06 26.4 0.5 1.3 1 0 0 1 1 1 1 Domain of unknown function, DUF529 Herpes_UL37_2 PF07413.11 BAM39704.1 - 0.038 13.2 0.3 0.051 12.8 0.3 1.1 1 0 0 1 1 1 0 Betaherpesvirus immediate-early glycoprotein UL37 PS_Dcarbxylase PF02666.15 BAM39705.1 - 1.3e-28 99.9 0.4 1.2e-27 96.8 0.4 1.9 1 1 0 1 1 1 1 Phosphatidylserine decarboxylase Biotin_lipoyl_2 PF13533.6 BAM39705.1 - 0.0013 18.5 2.1 0.44 10.4 0.0 3.9 4 0 0 4 4 4 1 Biotin-lipoyl like HlyD_3 PF13437.6 BAM39705.1 - 0.0017 19.0 0.5 1.8 9.3 0.0 3.2 3 0 0 3 3 3 1 HlyD family secretion protein Biotin_lipoyl PF00364.22 BAM39705.1 - 0.007 16.2 0.6 23 4.9 0.0 3.7 3 1 0 3 3 3 1 Biotin-requiring enzyme HlyD_D23 PF16576.5 BAM39705.1 - 0.088 12.0 0.1 9.7 5.3 0.0 3.1 2 2 1 3 3 3 0 Barrel-sandwich domain of CusB or HlyD membrane-fusion FAINT PF04385.15 BAM39706.1 - 7.5e-08 32.3 4.5 1.7e-07 31.2 0.9 2.9 1 1 2 3 3 3 1 Domain of unknown function, DUF529 DUF4488 PF14869.6 BAM39706.1 - 0.086 12.8 0.1 0.17 11.8 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4488) SOXp PF12336.8 BAM39706.1 - 0.096 13.8 0.1 0.14 13.2 0.1 1.3 1 0 0 1 1 1 0 SOX transcription factor FAINT PF04385.15 BAM39707.1 - 1e-15 57.5 20.4 1e-05 25.5 0.2 6.2 5 2 0 5 5 5 5 Domain of unknown function, DUF529 TC1 PF15063.6 BAM39708.1 - 0.075 12.9 0.0 0.083 12.8 0.0 1.0 1 0 0 1 1 1 0 Thyroid cancer protein 1 FAINT PF04385.15 BAM39710.1 - 8.7e-32 109.0 79.4 2.3e-06 27.6 3.1 10.7 10 0 0 10 10 10 9 Domain of unknown function, DUF529 FAINT PF04385.15 BAM39711.1 - 3.7e-18 65.4 25.8 1.3e-05 25.1 0.4 5.9 5 1 0 5 5 5 5 Domain of unknown function, DUF529 DAG1 PF05454.11 BAM39712.1 - 0.014 14.8 0.1 0.019 14.4 0.1 1.3 1 0 0 1 1 1 0 Dystroglycan (Dystrophin-associated glycoprotein 1) DUF5305 PF17231.2 BAM39712.1 - 0.017 14.5 0.3 0.028 13.8 0.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Gram_pos_anchor PF00746.21 BAM39712.1 - 0.024 14.6 0.2 0.05 13.5 0.2 1.5 1 0 0 1 1 1 0 LPXTG cell wall anchor motif DUF4448 PF14610.6 BAM39712.1 - 0.036 13.9 0.3 0.046 13.5 0.3 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4448) STE3 PF02076.15 BAM39712.1 - 0.047 12.9 0.3 0.083 12.1 0.3 1.3 1 0 0 1 1 1 0 Pheromone A receptor PBP_N PF17093.5 BAM39712.1 - 0.097 12.9 0.0 0.16 12.2 0.0 1.3 1 0 0 1 1 1 0 Penicillin-binding protein N-terminus TMEM154 PF15102.6 BAM39712.1 - 0.33 10.9 2.5 0.9 9.4 2.3 1.8 1 1 0 1 1 1 0 TMEM154 protein family FAINT PF04385.15 BAM39715.1 - 6.3e-12 45.4 10.5 0.00015 21.7 0.1 3.5 3 0 0 3 3 3 3 Domain of unknown function, DUF529 FAINT PF04385.15 BAM39717.1 - 3.3e-33 113.6 78.8 5.7e-05 23.1 4.6 14.6 14 0 0 14 14 14 13 Domain of unknown function, DUF529 ABC_tran PF00005.27 BAM39722.1 - 9.7e-29 100.6 0.0 4.4e-17 62.9 0.0 2.6 2 0 0 2 2 2 2 ABC transporter RsgA_GTPase PF03193.16 BAM39722.1 - 5.5e-06 26.4 0.7 0.022 14.7 0.1 2.4 2 0 0 2 2 2 2 RsgA GTPase AAA_16 PF13191.6 BAM39722.1 - 0.00035 21.0 0.2 0.4 11.0 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain Zeta_toxin PF06414.12 BAM39722.1 - 0.00049 19.4 0.3 0.3 10.3 0.1 2.3 2 0 0 2 2 2 2 Zeta toxin AAA_29 PF13555.6 BAM39722.1 - 0.00049 19.8 1.4 1.1 9.1 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain MeaB PF03308.16 BAM39722.1 - 0.00084 18.4 0.3 0.21 10.5 0.1 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB T2SSE PF00437.20 BAM39722.1 - 0.00095 18.3 0.3 0.64 9.0 0.0 2.2 2 0 0 2 2 2 2 Type II/IV secretion system protein AAA_30 PF13604.6 BAM39722.1 - 0.0017 18.1 0.9 0.067 12.9 0.1 2.2 2 0 0 2 2 2 1 AAA domain ATP_bind_1 PF03029.17 BAM39722.1 - 0.0044 16.8 1.0 1.2 8.9 0.2 2.5 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_23 PF13476.6 BAM39722.1 - 0.0093 16.5 1.8 0.09 13.3 0.2 2.4 2 0 0 2 2 2 1 AAA domain NB-ARC PF00931.22 BAM39722.1 - 0.011 14.9 1.2 0.061 12.5 0.1 2.2 2 0 0 2 2 2 0 NB-ARC domain SMC_N PF02463.19 BAM39722.1 - 0.016 14.7 1.7 0.25 10.7 0.3 2.6 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 BAM39722.1 - 0.018 15.3 0.5 3 8.1 0.0 2.8 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 BAM39722.1 - 0.018 14.4 0.3 3.3 7.0 0.0 2.4 2 0 0 2 2 2 0 FtsK/SpoIIIE family ATPase_2 PF01637.18 BAM39722.1 - 0.049 13.5 0.2 4.2 7.2 0.0 2.7 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea MMR_HSR1 PF01926.23 BAM39722.1 - 0.055 13.6 1.3 0.37 10.9 0.2 2.5 2 0 0 2 2 2 0 50S ribosome-binding GTPase MobB PF03205.14 BAM39722.1 - 0.057 13.3 1.2 1.3 8.9 0.4 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B DUF815 PF05673.13 BAM39722.1 - 0.11 11.6 1.2 0.94 8.6 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF815) DUF87 PF01935.17 BAM39722.1 - 0.16 12.0 10.6 0.63 10.1 0.6 3.5 3 0 0 3 3 3 0 Helicase HerA, central domain AAA_18 PF13238.6 BAM39722.1 - 0.17 12.4 0.3 7.7 7.1 0.1 2.7 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 BAM39722.1 - 0.19 11.7 2.4 15 5.5 0.1 3.1 3 0 0 3 3 3 0 NACHT domain AAA_7 PF12775.7 BAM39722.1 - 0.21 11.1 2.3 7.4 6.0 0.1 2.6 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_25 PF13481.6 BAM39722.1 - 0.26 10.8 0.2 21 4.6 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 BAM39722.1 - 0.43 10.7 1.2 13 6.0 0.3 2.4 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 BAM39722.1 - 1.9 8.0 8.8 1.3 8.6 0.4 2.6 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain AAA_21 PF13304.6 BAM39722.1 - 2.3 7.9 5.2 0.48 10.2 0.2 2.4 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system NTPase_1 PF03266.15 BAM39722.1 - 2.5 8.0 4.2 16 5.3 0.3 2.5 2 0 0 2 2 2 0 NTPase Xrn1_D3 PF18194.1 BAM39723.1 - 0.057 13.5 0.1 0.061 13.4 0.1 1.1 1 0 0 1 1 1 0 Exoribonuclease 1 Domain-3 Plasmodium_Vir PF05795.11 BAM39724.1 - 0.22 10.9 0.8 0.37 10.1 0.8 1.2 1 0 0 1 1 1 0 Plasmodium vivax Vir protein CopK PF11525.8 BAM39726.1 - 0.19 11.4 5.1 7.4 6.3 0.1 3.2 2 1 1 3 3 3 0 Copper resistance protein K SusF_SusE PF16411.5 BAM39728.1 - 0.13 12.8 6.4 0.027 15.0 2.0 2.2 2 0 0 2 2 2 0 Outer membrane protein SusF_SusE FAINT PF04385.15 BAM39731.1 - 5.2e-32 109.7 225.9 7.2e-06 26.0 6.1 22.2 21 3 0 21 21 21 13 Domain of unknown function, DUF529 RasGEF_N_2 PF14663.6 BAM39731.1 - 0.00088 19.6 48.4 0.19 12.1 0.1 12.6 14 0 0 14 14 14 4 Rapamycin-insensitive companion of mTOR RasGEF_N domain Dioxygenase_C PF00775.21 BAM39731.1 - 0.0053 16.2 25.5 0.66 9.4 0.0 9.6 11 1 0 12 12 12 2 Dioxygenase Sm_like PF16243.5 BAM39731.1 - 0.026 14.6 0.2 16 5.7 0.0 3.0 2 0 0 2 2 2 0 Sm_like domain DUF1257 PF06868.11 BAM39731.1 - 0.099 12.9 7.3 36 4.7 0.0 6.6 7 0 0 7 7 7 0 Protein of unknown function (DUF1257) MliC PF09864.9 BAM39731.1 - 7.5 6.6 10.6 1.7e+02 2.2 0.0 6.6 8 0 0 8 8 8 0 Membrane-bound lysozyme-inhibitor of c-type lysozyme ABC_tran PF00005.27 BAM39733.1 - 9.8e-34 116.8 0.0 1.1e-17 64.8 0.0 2.6 2 0 0 2 2 2 2 ABC transporter RsgA_GTPase PF03193.16 BAM39733.1 - 1.1e-06 28.7 0.3 0.0052 16.7 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase AAA_29 PF13555.6 BAM39733.1 - 9.3e-05 22.1 0.7 0.14 11.9 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain Zeta_toxin PF06414.12 BAM39733.1 - 0.00011 21.6 0.4 0.056 12.7 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin AAA_30 PF13604.6 BAM39733.1 - 0.00015 21.5 0.1 0.033 13.9 0.0 2.6 3 0 0 3 3 3 1 AAA domain MeaB PF03308.16 BAM39733.1 - 0.00025 20.1 0.2 0.25 10.3 0.1 2.3 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 BAM39733.1 - 0.00059 20.2 0.1 0.34 11.3 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain AAA_21 PF13304.6 BAM39733.1 - 0.004 17.0 2.5 1.4 8.6 0.1 2.8 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system ATP_bind_1 PF03029.17 BAM39733.1 - 0.005 16.7 0.3 3.3 7.4 0.1 2.6 2 0 0 2 2 2 2 Conserved hypothetical ATP binding protein AAA_18 PF13238.6 BAM39733.1 - 0.0061 17.1 0.1 2.3 8.8 0.0 2.8 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.19 BAM39733.1 - 0.011 15.2 0.9 0.06 12.8 0.1 2.4 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 BAM39733.1 - 0.014 15.5 0.5 1.6 8.8 0.1 2.9 3 0 0 3 3 2 0 50S ribosome-binding GTPase T2SSE PF00437.20 BAM39733.1 - 0.016 14.3 0.3 1.4 7.9 0.0 2.2 2 0 0 2 2 2 0 Type II/IV secretion system protein cobW PF02492.19 BAM39733.1 - 0.025 14.2 2.2 1.8 8.1 0.1 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_23 PF13476.6 BAM39733.1 - 0.028 14.9 5.1 2.5 8.5 0.1 2.8 3 0 0 3 3 2 0 AAA domain AAA_22 PF13401.6 BAM39733.1 - 0.029 14.7 0.2 5.8 7.2 0.0 2.8 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 BAM39733.1 - 0.066 12.8 2.3 0.25 10.9 0.1 2.7 3 0 0 3 3 3 0 SRP54-type protein, GTPase domain TsaE PF02367.17 BAM39733.1 - 0.068 13.2 0.2 11 6.0 0.0 2.8 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE MobB PF03205.14 BAM39733.1 - 0.075 12.9 0.8 3.2 7.7 0.2 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B TrwB_AAD_bind PF10412.9 BAM39733.1 - 0.12 11.2 0.9 11 4.8 0.0 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain NB-ARC PF00931.22 BAM39733.1 - 0.13 11.5 1.7 0.77 8.9 0.1 2.2 2 0 0 2 2 2 0 NB-ARC domain NACHT PF05729.12 BAM39733.1 - 0.15 12.0 1.7 14 5.5 0.1 2.6 2 0 0 2 2 2 0 NACHT domain DnaB_C PF03796.15 BAM39733.1 - 0.19 11.0 0.7 10 5.3 0.1 2.6 3 0 0 3 3 3 0 DnaB-like helicase C terminal domain FtsK_SpoIIIE PF01580.18 BAM39733.1 - 0.2 11.0 0.3 9.6 5.5 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family DUF87 PF01935.17 BAM39733.1 - 0.25 11.4 5.3 4.1 7.4 0.2 2.7 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_33 PF13671.6 BAM39733.1 - 0.41 10.8 2.9 16 5.6 0.0 2.6 3 0 0 3 3 2 0 AAA domain DUF2371 PF10177.9 BAM39733.1 - 0.47 10.6 4.0 1.4 9.1 0.3 2.7 2 0 0 2 2 2 0 Uncharacterised conserved protein (DUF2371) NTPase_1 PF03266.15 BAM39733.1 - 0.81 9.6 2.8 17 5.3 0.2 3.1 3 0 0 3 3 3 0 NTPase ANAPC4_WD40 PF12894.7 BAM39736.1 - 0.097 13.0 0.0 3.8 7.9 0.0 2.9 3 0 0 3 3 3 0 Anaphase-promoting complex subunit 4 WD40 domain INTS2 PF14750.6 BAM39736.1 - 0.16 9.5 0.0 0.22 9.0 0.0 1.1 1 0 0 1 1 1 0 Integrator complex subunit 2 FAINT PF04385.15 BAM39736.1 - 0.32 11.1 29.2 0.13 12.4 0.9 5.4 4 1 1 5 5 5 0 Domain of unknown function, DUF529 FAINT PF04385.15 BAM39737.1 - 1.8e-26 92.0 86.0 4.7e-05 23.4 4.5 10.8 10 0 0 10 10 10 9 Domain of unknown function, DUF529 DUF469 PF04320.14 BAM39737.1 - 0.037 14.9 2.7 12 6.8 0.1 3.1 3 0 0 3 3 3 0 Protein with unknown function (DUF469) Armet PF10208.9 BAM39737.1 - 0.39 10.6 5.7 0.19 11.7 1.9 2.4 3 0 0 3 3 3 0 Degradation arginine-rich protein for mis-folding Chibby PF14645.6 BAM39737.1 - 0.48 10.9 2.2 38 4.7 0.2 2.7 2 0 0 2 2 2 0 Chibby family FAINT PF04385.15 BAM39740.1 - 2.7e-46 155.5 66.2 3.4e-06 27.0 0.3 12.9 12 0 0 12 12 12 12 Domain of unknown function, DUF529 FAINT PF04385.15 BAM39741.1 - 2.7e-15 56.2 0.8 3.1e-07 30.4 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function, DUF529 DUF2606 PF10794.9 BAM39741.1 - 0.0012 18.6 0.6 1 9.1 0.0 2.6 2 0 0 2 2 2 2 Protein of unknown function (DUF2606) DUF5610 PF18433.1 BAM39742.1 - 5.9e-05 23.6 0.4 0.09 13.3 0.5 2.8 2 0 0 2 2 2 2 Domain of unknown function (DUF5610) DUF384 PF04064.13 BAM39742.1 - 3.9 7.4 7.2 0.3 11.0 0.3 2.9 4 0 0 4 4 4 0 Domain of unknown function (DUF384) SNF5 PF04855.12 BAM39743.1 - 1e-07 32.0 0.4 1.7e-07 31.3 0.4 1.4 1 1 0 1 1 1 1 SNF5 / SMARCB1 / INI1 Ndr PF03096.14 BAM39743.1 - 0.034 12.9 0.2 0.075 11.7 0.0 1.6 2 0 0 2 2 2 0 Ndr family RPA_C PF08784.11 BAM39744.1 - 0.0069 17.0 0.3 0.022 15.4 0.3 1.9 1 1 0 1 1 1 1 Replication protein A C terminal DUF2760 PF10816.8 BAM39744.1 - 0.05 13.4 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF2760) tRNA_anti-codon PF01336.25 BAM39744.1 - 0.12 12.4 0.0 0.19 11.7 0.0 1.4 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain PH_11 PF15413.6 BAM39745.1 - 0.26 11.7 2.9 2.1 8.8 0.5 2.9 2 0 0 2 2 2 0 Pleckstrin homology domain HECT PF00632.25 BAM39746.1 - 9.8e-92 307.7 0.3 2.5e-91 306.4 0.3 1.7 1 0 0 1 1 1 1 HECT-domain (ubiquitin-transferase) RNA_pol_Rpa2_4 PF06883.12 BAM39747.1 - 0.0077 16.2 0.0 0.23 11.5 0.0 2.6 2 0 0 2 2 2 1 RNA polymerase I, Rpa2 specific domain Luciferase_N PF05295.11 BAM39747.1 - 0.02 14.9 0.2 0.6 10.2 0.1 2.4 2 0 0 2 2 2 0 Luciferase/LBP N-terminal domain MMR_HSR1 PF01926.23 BAM39748.1 - 1.4e-10 41.3 0.0 4e-10 39.8 0.0 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase Roc PF08477.13 BAM39748.1 - 0.021 15.0 0.0 0.044 14.0 0.0 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase ArsR PF09824.9 BAM39748.1 - 0.026 14.1 0.0 0.067 12.8 0.0 1.6 2 0 0 2 2 2 0 ArsR transcriptional regulator Septin PF00735.18 BAM39748.1 - 0.031 13.5 0.0 0.046 13.0 0.0 1.2 1 0 0 1 1 1 0 Septin RsgA_GTPase PF03193.16 BAM39748.1 - 0.034 14.0 0.0 0.085 12.8 0.0 1.6 1 1 0 1 1 1 0 RsgA GTPase Orthopox_F8 PF05886.11 BAM39748.1 - 0.062 13.4 0.8 0.38 10.9 0.3 2.3 2 0 0 2 2 2 0 Orthopoxvirus F8 protein FeoB_N PF02421.18 BAM39748.1 - 0.083 12.4 0.0 0.33 10.5 0.0 2.0 2 1 0 2 2 2 0 Ferrous iron transport protein B V-ATPase_C PF03223.15 BAM39751.1 - 1.4e-87 294.5 9.9 1.5e-87 294.4 9.9 1.0 1 0 0 1 1 1 1 V-ATPase subunit C RraB PF06877.11 BAM39751.1 - 0.01 16.5 0.9 6.6 7.5 0.0 2.6 2 0 0 2 2 2 0 Regulator of ribonuclease activity B Complex1_LYR_2 PF13233.6 BAM39751.1 - 0.22 12.3 1.8 0.43 11.4 0.6 2.0 2 0 0 2 2 2 0 Complex1_LYR-like Thioredoxin PF00085.20 BAM39752.1 - 1.1e-20 73.5 0.1 1.4e-20 73.2 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 BAM39752.1 - 0.00013 22.2 0.0 0.00022 21.5 0.0 1.4 1 0 0 1 1 1 1 Thioredoxin-like Glutaredoxin PF00462.24 BAM39752.1 - 0.00027 21.1 0.0 0.00047 20.3 0.0 1.4 1 0 0 1 1 1 1 Glutaredoxin OST3_OST6 PF04756.13 BAM39752.1 - 0.00041 19.8 0.1 0.00071 19.0 0.0 1.4 1 1 1 2 2 2 1 OST3 / OST6 family, transporter family Thioredoxin_2 PF13098.6 BAM39752.1 - 0.0017 18.8 0.1 0.0087 16.5 0.1 2.0 1 1 0 1 1 1 1 Thioredoxin-like domain DUF953 PF06110.11 BAM39752.1 - 0.0037 16.9 0.0 0.0048 16.5 0.0 1.3 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF953) Thioredoxin_3 PF13192.6 BAM39752.1 - 0.02 14.9 0.0 0.033 14.2 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin domain Thioredoxin_7 PF13899.6 BAM39752.1 - 0.02 15.0 0.0 0.029 14.6 0.0 1.3 1 0 0 1 1 1 0 Thioredoxin-like TraF PF13728.6 BAM39752.1 - 0.034 13.9 0.0 0.041 13.7 0.0 1.1 1 0 0 1 1 1 0 F plasmid transfer operon protein AhpC-TSA PF00578.21 BAM39752.1 - 0.058 13.3 0.0 0.077 12.9 0.0 1.2 1 0 0 1 1 1 0 AhpC/TSA family Yippee-Mis18 PF03226.14 BAM39753.1 - 3.6e-15 56.1 0.1 4.2e-15 55.8 0.1 1.1 1 0 0 1 1 1 1 Yippee zinc-binding/DNA-binding /Mis18, centromere assembly SelR PF01641.18 BAM39753.1 - 0.00028 20.9 0.1 0.00038 20.5 0.1 1.2 1 0 0 1 1 1 1 SelR domain DUF2321 PF10083.9 BAM39753.1 - 0.022 14.4 0.4 0.16 11.6 0.4 2.0 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) zinc_ribbon_6 PF14599.6 BAM39753.1 - 0.024 14.7 0.4 0.41 10.7 0.0 2.2 2 0 0 2 2 2 0 Zinc-ribbon RIG-I_C-RD PF11648.8 BAM39753.1 - 0.026 14.8 0.1 0.032 14.4 0.1 1.2 1 0 0 1 1 1 0 C-terminal domain of RIG-I GFA PF04828.14 BAM39753.1 - 0.038 14.3 0.5 0.96 9.8 0.0 2.2 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme Ephrin_rec_like PF07699.13 BAM39753.1 - 0.053 13.3 0.3 9.7 6.0 0.0 2.2 2 0 0 2 2 2 0 Putative ephrin-receptor like DZR PF12773.7 BAM39753.1 - 0.083 12.9 0.1 3.5 7.7 0.0 2.1 2 0 0 2 2 2 0 Double zinc ribbon Lar_restr_allev PF14354.6 BAM39753.1 - 0.088 13.2 1.2 0.63 10.5 1.3 2.0 1 1 1 2 2 2 0 Restriction alleviation protein Lar A2L_zn_ribbon PF08792.10 BAM39753.1 - 0.18 11.6 4.7 1.7 8.5 0.3 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain Hist_deacetyl PF00850.19 BAM39754.1 - 1e-80 271.5 0.4 1.4e-80 271.1 0.2 1.3 2 0 0 2 2 2 1 Histone deacetylase domain DUF3038 PF11237.8 BAM39754.1 - 0.14 12.2 0.0 0.22 11.6 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3038) tRNA-synt_2b PF00587.25 BAM39755.1 - 6.5e-21 75.1 0.2 1.2e-20 74.2 0.2 1.5 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 BAM39755.1 - 1.1e-06 28.7 0.0 2.6e-06 27.5 0.0 1.6 1 0 0 1 1 1 1 Anticodon binding domain SLBP_RNA_bind PF15247.6 BAM39756.1 - 6e-16 58.3 2.7 1.2e-14 54.1 2.7 2.7 1 1 0 1 1 1 1 Histone RNA hairpin-binding protein RNA-binding domain Metallophos PF00149.28 BAM39757.1 - 9e-33 114.5 0.9 1.1e-32 114.2 0.3 1.4 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 BAM39757.1 - 8.1e-05 23.0 0.3 0.00041 20.7 0.2 2.1 2 0 0 2 2 2 1 Serine-threonine protein phosphatase N-terminal domain Histone PF00125.24 BAM39758.1 - 4.7e-21 75.5 0.6 4.7e-21 75.5 0.6 2.5 2 1 0 3 3 3 1 Core histone H2A/H2B/H3/H4 Mt_ATP-synt_D PF05873.12 BAM39758.1 - 0.057 13.3 1.0 0.1 12.5 1.0 1.4 1 0 0 1 1 1 0 ATP synthase D chain, mitochondrial (ATP5H) DUF4169 PF13770.6 BAM39758.1 - 0.2 12.0 0.3 0.2 12.0 0.3 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4169) COX5B PF01215.19 BAM39759.1 - 2e-12 46.9 0.0 4.3e-12 45.8 0.0 1.5 2 0 0 2 2 2 1 Cytochrome c oxidase subunit Vb Aminotran_1_2 PF00155.21 BAM39760.1 - 1.4e-44 152.7 0.0 1.6e-44 152.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Ribosomal_TL5_C PF14693.6 BAM39761.1 - 0.0018 18.6 0.0 0.003 17.9 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein TL5, C-terminal domain Ribosomal_L25p PF01386.19 BAM39761.1 - 0.059 13.9 0.0 0.28 11.7 0.0 2.2 1 1 1 2 2 2 0 Ribosomal L25p family Pro_isomerase PF00160.21 BAM39762.1 - 6.3e-41 140.3 0.1 8.1e-41 139.9 0.1 1.1 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD NTF2 PF02136.20 BAM39763.1 - 3.9e-28 98.4 0.1 4.4e-28 98.3 0.1 1.0 1 0 0 1 1 1 1 Nuclear transport factor 2 (NTF2) domain TpcC PF12642.7 BAM39763.1 - 0.016 15.0 0.1 0.78 9.5 0.7 2.0 1 1 1 2 2 2 0 Conjugative transposon protein TcpC DUF4440 PF14534.6 BAM39763.1 - 0.14 12.6 0.0 0.16 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4440) GATase_3 PF07685.14 BAM39764.1 - 0.19 11.3 0.0 0.41 10.2 0.0 1.5 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain PIP5K PF01504.18 BAM39765.1 - 1.9e-37 129.0 2.4 1.1e-25 90.4 1.1 2.5 1 1 1 2 2 2 2 Phosphatidylinositol-4-phosphate 5-Kinase Actin PF00022.19 BAM39766.1 - 2.7e-107 358.9 0.0 2.1e-105 352.7 0.0 2.0 1 1 0 1 1 1 1 Actin MreB_Mbl PF06723.13 BAM39766.1 - 3.7e-05 22.7 0.0 0.043 12.6 0.0 2.3 2 0 0 2 2 2 2 MreB/Mbl protein DS PF01916.17 BAM39767.1 - 5.7e-128 426.2 0.0 6.9e-128 425.9 0.0 1.1 1 0 0 1 1 1 1 Deoxyhypusine synthase AAA PF00004.29 BAM39768.1 - 1.4e-77 258.5 0.0 3.6e-42 143.9 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 BAM39768.1 - 1.3e-11 44.1 0.0 7e-08 32.1 0.0 2.6 2 0 0 2 2 2 2 AAA+ lid domain AAA_16 PF13191.6 BAM39768.1 - 4.6e-11 43.4 0.0 0.00053 20.4 0.0 4.3 2 2 1 3 3 3 2 AAA ATPase domain AAA_2 PF07724.14 BAM39768.1 - 1.7e-09 38.0 0.0 0.00016 21.8 0.0 2.5 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_5 PF07728.14 BAM39768.1 - 5e-09 36.3 0.0 0.00023 21.2 0.0 3.9 3 1 0 3 3 2 2 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 BAM39768.1 - 1.4e-08 34.6 0.0 0.0031 17.3 0.0 3.0 3 1 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain RNA_helicase PF00910.22 BAM39768.1 - 8.4e-08 32.6 0.0 0.0029 18.0 0.0 2.8 2 0 0 2 2 2 2 RNA helicase AAA_14 PF13173.6 BAM39768.1 - 1.4e-07 31.6 0.0 0.0021 18.1 0.0 2.7 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 BAM39768.1 - 1.5e-06 27.7 0.0 0.0063 15.9 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_22 PF13401.6 BAM39768.1 - 2.7e-05 24.4 2.6 0.013 15.8 0.7 4.2 2 2 1 3 3 3 1 AAA domain IstB_IS21 PF01695.17 BAM39768.1 - 9.6e-05 22.2 0.0 0.56 9.9 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein ABC_tran PF00005.27 BAM39768.1 - 0.00011 22.8 0.0 0.16 12.5 0.0 2.6 2 0 0 2 2 2 1 ABC transporter TIP49 PF06068.13 BAM39768.1 - 0.00013 21.3 0.0 0.037 13.2 0.0 2.2 2 0 0 2 2 2 1 TIP49 P-loop domain Vps4_C PF09336.10 BAM39768.1 - 0.00016 21.6 0.1 0.5 10.4 0.0 3.6 4 0 0 4 4 4 1 Vps4 C terminal oligomerisation domain AAA_24 PF13479.6 BAM39768.1 - 0.00018 21.3 0.0 0.0042 16.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain SRPRB PF09439.10 BAM39768.1 - 0.00018 21.0 0.0 0.0028 17.1 0.0 2.3 2 0 0 2 2 2 1 Signal recognition particle receptor beta subunit Bac_DnaA PF00308.18 BAM39768.1 - 0.00026 20.9 0.0 0.0013 18.7 0.0 1.9 2 0 0 2 2 2 1 Bacterial dnaA protein AAA_7 PF12775.7 BAM39768.1 - 0.00043 19.8 0.0 0.52 9.8 0.0 2.7 2 0 0 2 2 2 2 P-loop containing dynein motor region AAA_33 PF13671.6 BAM39768.1 - 0.00065 19.9 0.0 1.1 9.5 0.0 2.5 2 0 0 2 2 2 2 AAA domain ATPase_2 PF01637.18 BAM39768.1 - 0.00088 19.3 1.2 0.46 10.4 0.1 3.5 2 1 1 3 3 3 1 ATPase domain predominantly from Archaea DUF815 PF05673.13 BAM39768.1 - 0.00096 18.4 0.0 7 5.7 0.0 3.2 2 1 1 3 3 3 0 Protein of unknown function (DUF815) Rad17 PF03215.15 BAM39768.1 - 0.0018 18.2 0.0 0.6 10.0 0.0 2.7 2 0 0 2 2 2 1 Rad17 P-loop domain NB-ARC PF00931.22 BAM39768.1 - 0.002 17.3 0.0 0.29 10.3 0.0 3.1 3 0 0 3 3 2 1 NB-ARC domain Parvo_NS1 PF01057.17 BAM39768.1 - 0.0021 17.2 0.0 0.44 9.6 0.0 2.3 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 AAA_17 PF13207.6 BAM39768.1 - 0.0021 18.5 0.0 0.11 12.9 0.0 3.0 3 0 0 3 3 3 1 AAA domain ATPase PF06745.13 BAM39768.1 - 0.0024 17.2 0.0 2.3 7.5 0.0 3.3 3 1 1 4 4 4 1 KaiC KAP_NTPase PF07693.14 BAM39768.1 - 0.0028 17.0 0.0 0.016 14.5 0.0 2.2 2 1 0 2 2 2 1 KAP family P-loop domain AAA_18 PF13238.6 BAM39768.1 - 0.0037 17.8 0.1 0.37 11.3 0.1 2.9 2 1 0 2 2 2 1 AAA domain NACHT PF05729.12 BAM39768.1 - 0.0048 16.8 0.0 0.35 10.8 0.0 3.1 3 0 0 3 3 3 1 NACHT domain TsaE PF02367.17 BAM39768.1 - 0.0062 16.5 0.0 5.2 7.1 0.0 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Sigma54_activat PF00158.26 BAM39768.1 - 0.0074 16.0 0.0 2.6 7.7 0.0 2.7 2 0 0 2 2 2 1 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 BAM39768.1 - 0.027 14.6 0.0 9.7 6.3 0.0 2.5 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_11 PF13086.6 BAM39768.1 - 0.033 14.0 0.0 4.2 7.1 0.0 2.6 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 BAM39768.1 - 0.048 13.2 0.3 3.1 7.3 0.1 2.5 2 0 0 2 2 2 0 AAA domain AAA_3 PF07726.11 BAM39768.1 - 0.075 12.9 0.0 17 5.3 0.0 2.5 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Zeta_toxin PF06414.12 BAM39768.1 - 0.098 11.9 0.0 2.1 7.5 0.0 2.2 2 0 0 2 2 2 0 Zeta toxin Viral_helicase1 PF01443.18 BAM39768.1 - 0.11 12.2 0.0 2.7 7.7 0.0 2.8 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AAA_28 PF13521.6 BAM39768.1 - 0.12 12.6 0.0 1.9 8.7 0.0 2.3 2 0 0 2 2 2 0 AAA domain NMT PF01233.19 BAM39769.1 - 3.8e-73 244.6 0.3 1e-72 243.2 0.0 1.8 2 0 0 2 2 2 1 Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain NMT_C PF02799.15 BAM39769.1 - 2.3e-59 200.5 1.3 4.5e-59 199.5 1.3 1.4 1 0 0 1 1 1 1 Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain Acetyltransf_9 PF13527.7 BAM39769.1 - 0.00083 19.4 0.0 0.0022 18.1 0.0 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain CS PF04969.16 BAM39770.1 - 4.5e-06 27.6 0.0 9.5e-06 26.5 0.0 1.5 1 0 0 1 1 1 1 CS domain Pyrophosphatase PF00719.19 BAM39771.1 - 3.4e-39 134.2 0.0 4.8e-39 133.7 0.0 1.2 1 0 0 1 1 1 1 Inorganic pyrophosphatase L6_membrane PF05805.12 BAM39771.1 - 0.032 13.8 0.1 0.044 13.4 0.1 1.2 1 0 0 1 1 1 0 L6 membrane protein Nuf2 PF03800.14 BAM39773.1 - 1.1e-21 77.4 0.1 3.1e-21 75.9 0.0 1.9 2 0 0 2 2 2 1 Nuf2 family TPR_MLP1_2 PF07926.12 BAM39773.1 - 0.0045 17.0 5.6 0.0045 17.0 5.6 3.8 1 1 3 4 4 4 2 TPR/MLP1/MLP2-like protein Imm3 PF14425.6 BAM39773.1 - 0.22 11.5 5.8 3.2 7.8 0.7 3.6 3 1 0 3 3 3 0 Immunity protein Imm3 Jnk-SapK_ap_N PF09744.9 BAM39773.1 - 3.1 8.0 30.5 0.39 10.9 9.6 3.1 1 1 2 3 3 3 0 JNK_SAPK-associated protein-1 Vir_act_alpha_C PF10400.9 BAM39773.1 - 4.3 8.1 8.6 0.25 12.1 0.4 3.1 3 1 1 4 4 4 0 Virulence activator alpha C-term Ribosomal_S8 PF00410.19 BAM39774.1 - 3.6e-20 72.2 0.0 6.1e-20 71.5 0.0 1.4 1 1 0 1 1 1 1 Ribosomal protein S8 O-antigen_lig PF13425.6 BAM39775.1 - 0.32 9.7 3.3 0.35 9.6 3.3 1.1 1 0 0 1 1 1 0 O-antigen ligase like membrane protein TB2_DP1_HVA22 PF03134.19 BAM39776.1 - 1.8e-16 59.8 11.2 4.3e-16 58.6 9.7 2.2 1 1 1 2 2 2 1 TB2/DP1, HVA22 family RRM_1 PF00076.22 BAM39777.1 - 3.8e-14 52.2 0.0 7.4e-14 51.3 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 BAM39777.1 - 0.00017 21.6 0.1 0.00032 20.7 0.1 1.4 1 0 0 1 1 1 1 RNA binding motif DUF4651 PF15513.6 BAM39777.1 - 0.061 13.1 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4651) Ribosomal_L27A PF00828.19 BAM39777.1 - 0.1 13.3 0.5 7.4 7.3 0.1 2.2 2 0 0 2 2 2 0 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FYVE PF01363.21 BAM39778.1 - 0.00012 22.1 9.5 0.00012 22.1 9.5 1.8 2 0 0 2 2 2 1 FYVE zinc finger Filament PF00038.21 BAM39778.1 - 0.00015 21.5 2.6 0.00021 21.0 2.6 1.2 1 0 0 1 1 1 1 Intermediate filament protein CENP-F_leu_zip PF10473.9 BAM39778.1 - 0.00035 20.6 4.9 0.00054 20.0 2.8 2.3 2 2 0 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 GAS PF13851.6 BAM39778.1 - 0.00036 20.0 1.7 0.00064 19.1 1.7 1.4 1 0 0 1 1 1 1 Growth-arrest specific micro-tubule binding DUF4200 PF13863.6 BAM39778.1 - 0.0013 19.1 1.5 0.011 16.1 0.3 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF4200) YkyA PF10368.9 BAM39778.1 - 0.0013 18.4 0.2 0.002 17.8 0.2 1.2 1 0 0 1 1 1 1 Putative cell-wall binding lipoprotein SHE3 PF17078.5 BAM39778.1 - 0.002 17.9 3.0 0.0032 17.2 3.0 1.2 1 0 0 1 1 1 1 SWI5-dependent HO expression protein 3 Takusan PF04822.13 BAM39778.1 - 0.0024 17.7 0.6 0.005 16.7 0.6 1.6 1 0 0 1 1 1 1 Takusan Taxilin PF09728.9 BAM39778.1 - 0.0071 15.6 0.4 0.012 14.8 0.4 1.4 1 0 0 1 1 1 1 Myosin-like coiled-coil protein TPR_MLP1_2 PF07926.12 BAM39778.1 - 0.012 15.7 0.8 0.031 14.4 0.8 1.7 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein MAD PF05557.13 BAM39778.1 - 0.013 13.9 3.8 0.018 13.4 3.8 1.1 1 0 0 1 1 1 0 Mitotic checkpoint protein Cluap1 PF10234.9 BAM39778.1 - 0.015 14.7 0.3 0.019 14.3 0.3 1.2 1 0 0 1 1 1 0 Clusterin-associated protein-1 TMPIT PF07851.13 BAM39778.1 - 0.031 13.6 0.9 0.045 13.0 0.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein She9_MDM33 PF05546.11 BAM39778.1 - 0.066 13.0 2.2 0.62 9.8 0.4 2.2 1 1 1 2 2 2 0 She9 / Mdm33 family Golgin_A5 PF09787.9 BAM39778.1 - 0.079 12.4 3.7 0.22 10.9 1.3 2.0 1 1 1 2 2 2 0 Golgin subfamily A member 5 UPF0242 PF06785.11 BAM39778.1 - 0.086 12.9 0.2 0.086 12.9 0.2 1.6 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus TMF_TATA_bd PF12325.8 BAM39778.1 - 0.16 12.2 4.5 0.44 10.8 4.5 1.8 1 1 0 1 1 1 0 TATA element modulatory factor 1 TATA binding DUF3450 PF11932.8 BAM39778.1 - 0.17 11.2 2.6 0.34 10.2 1.8 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) HMMR_N PF15905.5 BAM39778.1 - 0.18 11.2 3.0 0.064 12.7 0.4 1.6 2 0 0 2 2 2 0 Hyaluronan mediated motility receptor N-terminal TackOD1 PF18551.1 BAM39778.1 - 1.1 8.9 9.3 16 5.1 9.3 2.3 1 1 0 1 1 1 0 Thaumarchaeal output domain 1 Filament PF00038.21 BAM39779.1 - 0.0065 16.1 50.3 0.14 11.7 8.2 3.3 1 1 2 3 3 3 3 Intermediate filament protein TMF_DNA_bd PF12329.8 BAM39779.1 - 0.013 15.5 7.7 0.013 15.5 7.7 6.5 4 3 2 6 6 4 0 TATA element modulatory factor 1 DNA binding ATG16 PF08614.11 BAM39779.1 - 0.023 14.9 55.8 0.046 13.9 8.2 3.5 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) DUF948 PF06103.11 BAM39779.1 - 0.036 14.3 15.4 0.78 10.0 0.1 4.6 2 2 1 4 4 4 0 Bacterial protein of unknown function (DUF948) TSC22 PF01166.18 BAM39779.1 - 0.072 13.4 14.4 0.59 10.5 0.2 4.9 3 2 1 4 4 4 0 TSC-22/dip/bun family TMF_TATA_bd PF12325.8 BAM39779.1 - 0.084 13.1 49.4 0.21 11.8 8.9 4.3 1 1 3 4 4 4 0 TATA element modulatory factor 1 TATA binding HOOK PF05622.12 BAM39779.1 - 0.11 10.6 48.6 0.2 9.8 48.6 1.4 1 0 0 1 1 1 0 HOOK protein DUF1752 PF08550.10 BAM39779.1 - 0.11 12.3 0.4 0.82 9.6 0.0 2.8 2 0 0 2 2 2 0 Fungal protein of unknown function (DUF1752) Baculo_PEP_C PF04513.12 BAM39779.1 - 0.16 12.0 10.7 1.5 8.8 0.7 3.7 2 1 1 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus DUF3584 PF12128.8 BAM39779.1 - 0.18 9.3 46.5 0.19 9.2 17.7 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) ERM PF00769.19 BAM39779.1 - 0.23 11.2 60.0 0.037 13.9 21.6 2.4 1 1 1 2 2 2 0 Ezrin/radixin/moesin family TPR_MLP1_2 PF07926.12 BAM39779.1 - 0.25 11.4 60.2 0.84 9.7 22.8 4.3 1 1 3 4 4 4 0 TPR/MLP1/MLP2-like protein CALCOCO1 PF07888.11 BAM39779.1 - 0.29 10.0 54.8 2.2 7.1 28.2 2.0 1 1 1 2 2 2 0 Calcium binding and coiled-coil domain (CALCOCO1) like GAS PF13851.6 BAM39779.1 - 0.33 10.3 55.5 0.1 12.0 20.1 4.1 1 1 2 4 4 4 0 Growth-arrest specific micro-tubule binding DUF4407 PF14362.6 BAM39779.1 - 0.45 9.8 37.1 0.15 11.3 11.2 2.5 1 1 0 2 2 2 0 Domain of unknown function (DUF4407) Laminin_II PF06009.12 BAM39779.1 - 0.45 10.5 32.3 0.74 9.8 1.4 4.4 3 1 1 4 4 4 0 Laminin Domain II APG6_N PF17675.1 BAM39779.1 - 0.71 10.4 59.2 0.12 13.0 18.2 4.2 1 1 2 3 3 3 0 Apg6 coiled-coil region ADIP PF11559.8 BAM39779.1 - 0.84 9.7 52.2 0.79 9.8 4.6 4.7 1 1 4 5 5 5 0 Afadin- and alpha -actinin-Binding WEMBL PF05701.11 BAM39779.1 - 1.3 7.6 48.8 0.74 8.4 16.5 2.1 1 1 1 2 2 2 0 Weak chloroplast movement under blue light Spc7 PF08317.11 BAM39779.1 - 2.1 7.2 54.5 0.015 14.2 18.1 3.1 1 1 2 3 3 3 0 Spc7 kinetochore protein IFT57 PF10498.9 BAM39779.1 - 2.2 7.2 42.0 1.5 7.8 2.3 3.1 1 1 2 3 3 3 0 Intra-flagellar transport protein 57 Golgin_A5 PF09787.9 BAM39779.1 - 2.4 7.6 51.5 0.17 11.3 26.2 2.4 1 1 1 2 2 2 0 Golgin subfamily A member 5 Lebercilin PF15619.6 BAM39779.1 - 3.1 7.4 57.8 3.6 7.2 24.5 3.8 1 1 2 4 4 4 0 Ciliary protein causing Leber congenital amaurosis disease NPV_P10 PF05531.12 BAM39779.1 - 3.4 8.2 18.2 16 6.0 0.0 5.3 4 3 1 6 6 5 0 Nucleopolyhedrovirus P10 protein DUF1993 PF09351.10 BAM39779.1 - 5.3 7.2 11.5 2.2 8.4 4.1 2.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1993) CENP-F_leu_zip PF10473.9 BAM39779.1 - 6 6.9 51.5 1.2 9.1 13.5 3.6 1 1 2 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 V_ATPase_I PF01496.19 BAM39779.1 - 6.9 4.5 35.3 0.089 10.7 15.0 2.3 1 1 1 2 2 2 0 V-type ATPase 116kDa subunit family DUF1664 PF07889.12 BAM39779.1 - 7.8 6.6 28.2 4.5 7.3 1.1 5.1 1 1 4 5 5 5 0 Protein of unknown function (DUF1664) DXP_redisom_C PF08436.12 BAM39782.1 - 5.4e-34 116.2 0.0 1.3e-33 115.0 0.0 1.7 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DXP_reductoisom PF02670.16 BAM39782.1 - 4.8e-33 114.6 0.0 8.2e-33 113.9 0.0 1.4 1 0 0 1 1 1 1 1-deoxy-D-xylulose 5-phosphate reductoisomerase DXPR_C PF13288.6 BAM39782.1 - 1.1e-27 96.6 0.0 2.1e-27 95.7 0.0 1.5 1 0 0 1 1 1 1 DXP reductoisomerase C-terminal domain Semialdhyde_dh PF01118.24 BAM39782.1 - 0.00058 20.3 0.1 0.0018 18.7 0.1 1.8 1 1 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain DapB_N PF01113.20 BAM39782.1 - 0.0031 17.6 0.1 0.0084 16.2 0.0 1.7 2 0 0 2 2 2 1 Dihydrodipicolinate reductase, N-terminus NAD_binding_3 PF03447.16 BAM39782.1 - 0.021 15.5 0.1 0.22 12.2 0.1 2.3 1 1 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain Noelin-1 PF12308.8 BAM39783.1 - 0.085 12.8 1.3 2.9 7.9 0.0 3.3 3 0 0 3 3 3 0 Neurogenesis glycoprotein Pep3_Vps18 PF05131.14 BAM39784.1 - 2.3e-16 60.0 0.0 4.5e-16 59.0 0.0 1.5 1 0 0 1 1 1 1 Pep3/Vps18/deep orange family Vps39_2 PF10367.9 BAM39784.1 - 2.5e-06 27.9 0.3 6.8e-06 26.5 0.3 1.7 1 0 0 1 1 1 1 Vacuolar sorting protein 39 domain 2 zf-C3HC4_2 PF13923.6 BAM39784.1 - 0.0006 19.6 1.7 0.0006 19.6 1.7 2.0 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 BAM39784.1 - 0.0023 17.9 1.4 0.0081 16.2 1.4 2.0 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_2 PF13639.6 BAM39784.1 - 0.0028 17.9 1.4 0.0028 17.9 1.4 2.3 3 0 0 3 3 2 1 Ring finger domain zf-rbx1 PF12678.7 BAM39784.1 - 0.048 13.9 2.9 0.19 12.0 2.9 2.1 1 1 0 1 1 1 0 RING-H2 zinc finger domain DUF4709 PF15821.5 BAM39784.1 - 0.075 13.3 0.7 0.28 11.5 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4709) Zn_ribbon_17 PF17120.5 BAM39784.1 - 0.11 12.2 5.4 0.032 13.8 1.6 2.1 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type Prok-RING_1 PF14446.6 BAM39784.1 - 0.19 11.7 1.1 0.39 10.7 0.2 1.9 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 Zf_RING PF16744.5 BAM39784.1 - 0.34 11.1 1.7 0.43 10.7 0.2 2.0 2 0 0 2 2 1 0 KIAA1045 RING finger zf-C3H2C3 PF17122.5 BAM39784.1 - 0.38 10.8 6.0 0.31 11.1 3.3 2.3 2 0 0 2 2 2 0 Zinc-finger zf-RING_5 PF14634.6 BAM39784.1 - 1.4 8.9 9.0 0.17 11.9 3.4 2.4 2 1 1 3 3 3 0 zinc-RING finger domain zf-C3HC4 PF00097.25 BAM39784.1 - 3.4 7.6 6.6 0.33 10.9 1.1 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 BAM39784.1 - 6.6 6.6 14.7 0.11 12.3 6.9 2.2 2 0 0 2 2 2 0 RING-like zinc finger Myb_DNA-bind_6 PF13921.6 BAM39785.1 - 0.00013 22.2 0.6 0.00038 20.7 0.6 1.8 1 0 0 1 1 1 1 Myb-like DNA-binding domain IGR PF09597.10 BAM39785.1 - 0.00027 21.0 0.0 0.00074 19.6 0.0 1.8 1 0 0 1 1 1 1 IGR protein motif SANT_DAMP1_like PF16282.5 BAM39785.1 - 0.0069 16.6 0.8 0.016 15.4 0.8 1.6 1 0 0 1 1 1 1 SANT/Myb-like domain of DAMP1 zf-SNAP50_C PF12251.8 BAM39786.1 - 8.6e-39 133.3 0.3 1.7e-38 132.4 0.3 1.4 1 0 0 1 1 1 1 snRNA-activating protein of 50kDa MW C terminal CDC37_C PF08564.10 BAM39786.1 - 0.0034 17.5 0.0 0.007 16.5 0.0 1.5 1 0 0 1 1 1 1 Cdc37 C terminal domain Glu-tRNAGln PF02686.15 BAM39786.1 - 0.026 14.8 0.1 0.56 10.5 0.0 2.5 2 0 0 2 2 2 0 Glu-tRNAGln amidotransferase C subunit DUF269 PF03270.13 BAM39787.1 - 0.15 12.1 0.0 0.17 12.0 0.0 1.0 1 0 0 1 1 1 0 Protein of unknown function, DUF269 Ribosomal_L27e PF01777.18 BAM39788.1 - 2.3e-28 98.4 3.6 3.2e-28 97.9 3.6 1.2 1 0 0 1 1 1 1 Ribosomal L27e protein family KOW PF00467.29 BAM39788.1 - 0.086 12.8 0.0 0.19 11.7 0.0 1.6 1 0 0 1 1 1 0 KOW motif ENTH PF01417.20 BAM39789.1 - 3.6e-07 30.3 4.4 9.8e-06 25.6 0.9 2.7 3 0 0 3 3 3 2 ENTH domain RTP1_C1 PF10363.9 BAM39789.1 - 0.018 15.2 0.5 0.096 12.9 0.1 2.2 2 0 0 2 2 2 0 Required for nuclear transport of RNA pol II C-terminus 1 RasGEF_N PF00618.20 BAM39789.1 - 0.029 14.6 0.1 0.096 12.9 0.1 1.9 1 0 0 1 1 1 0 RasGEF N-terminal motif Ribosomal_L29e PF01779.17 BAM39791.1 - 4.2e-21 75.0 11.5 4.2e-21 75.0 11.5 1.4 2 0 0 2 2 2 1 Ribosomal L29e protein family ECR1_N PF14382.6 BAM39793.1 - 8.5e-08 31.9 0.0 1.8e-07 30.8 0.0 1.6 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region KH_6 PF15985.5 BAM39793.1 - 2.1e-07 31.2 1.4 5.7e-07 29.8 1.4 1.7 1 0 0 1 1 1 1 KH domain Ribosomal_L5e PF17144.4 BAM39795.1 - 2e-82 275.1 1.3 2.4e-81 271.5 0.6 2.1 2 0 0 2 2 2 1 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18_c PF14204.6 BAM39795.1 - 2.5e-32 111.7 4.1 2.5e-32 111.7 4.1 1.9 3 0 0 3 3 3 1 Ribosomal L18 C-terminal region DUF1476 PF07345.11 BAM39795.1 - 0.067 13.6 0.2 0.24 11.8 0.0 2.1 2 0 0 2 2 2 0 ATPase inhibitor subunit zeta Ribosomal_L7Ae PF01248.26 BAM39796.1 - 2e-22 78.7 0.7 3.8e-22 77.8 0.7 1.4 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Las1 PF04031.13 BAM39799.1 - 6.9e-31 107.4 0.2 1.6e-30 106.3 0.2 1.6 1 0 0 1 1 1 1 Las1-like zf-CCCH PF00642.24 BAM39800.1 - 2.2e-10 40.2 7.7 1.4e-06 28.1 0.7 2.7 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 BAM39800.1 - 4.4e-05 23.4 16.1 0.022 14.8 5.5 3.4 2 1 0 2 2 2 2 Zinc finger domain zf-CCCH_3 PF15663.5 BAM39800.1 - 0.00013 22.1 6.0 0.04 14.1 0.6 2.6 1 1 1 2 2 2 2 Zinc-finger containing family zf-CCCH_2 PF14608.6 BAM39800.1 - 0.0031 17.9 0.9 0.0031 17.9 0.9 3.2 3 0 0 3 3 3 1 RNA-binding, Nab2-type zinc finger zf-CCCH_4 PF18044.1 BAM39800.1 - 0.011 15.5 13.9 0.43 10.4 2.6 3.0 2 1 0 2 2 2 0 CCCH-type zinc finger Torus PF16131.5 BAM39800.1 - 0.012 16.3 7.6 0.67 10.7 1.4 2.7 1 1 1 2 2 2 0 Torus domain zf-C3H1 PF10650.9 BAM39800.1 - 5.3 6.9 6.6 0.49 10.2 1.2 2.2 2 0 0 2 2 2 0 Putative zinc-finger domain PrmA PF06325.13 BAM39801.1 - 7.6e-10 38.7 0.0 1.2e-09 38.0 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_25 PF13649.6 BAM39801.1 - 1.4e-09 38.5 0.0 3.5e-09 37.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 BAM39801.1 - 1.3e-07 32.2 0.0 6.9e-07 29.8 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAM39801.1 - 1.4e-06 28.2 0.0 3.2e-06 27.0 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 BAM39801.1 - 8.6e-06 25.7 0.0 1.6e-05 24.8 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 BAM39801.1 - 0.0001 21.9 0.0 0.00018 21.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_9 PF08003.11 BAM39801.1 - 0.00094 18.2 0.0 0.0016 17.5 0.0 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_18 PF12847.7 BAM39801.1 - 0.0053 16.7 0.0 0.012 15.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 BAM39801.1 - 0.0074 15.7 0.0 0.015 14.7 0.0 1.6 1 0 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_16 PF10294.9 BAM39801.1 - 0.0078 16.0 0.0 0.013 15.2 0.0 1.3 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_12 PF08242.12 BAM39801.1 - 0.021 15.6 0.0 0.046 14.5 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Ribosomal_L21e PF01157.18 BAM39802.1 - 1.2e-41 140.6 4.5 1.2e-41 140.6 4.5 1.6 2 0 0 2 2 2 1 Ribosomal protein L21e NAC PF01849.18 BAM39803.1 - 5e-19 68.0 0.0 1.1e-18 66.9 0.0 1.6 1 0 0 1 1 1 1 NAC domain WW PF00397.26 BAM39804.1 - 1e-07 31.9 1.4 2.2e-07 30.9 1.4 1.5 1 0 0 1 1 1 1 WW domain CRR7 PF12095.8 BAM39804.1 - 0.045 14.2 0.1 0.098 13.1 0.1 1.6 1 0 0 1 1 1 0 Protein CHLORORESPIRATORY REDUCTION 7 RPW8 PF05659.11 BAM39804.1 - 0.12 12.0 3.1 0.56 9.9 0.2 2.4 1 1 1 2 2 2 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 ING PF12998.7 BAM39804.1 - 1.1 9.9 7.1 0.46 11.1 2.7 2.3 2 1 0 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding FAINT PF04385.15 BAM39806.1 - 0.00012 22.1 0.3 0.00012 22.1 0.3 3.0 2 1 1 3 3 3 1 Domain of unknown function, DUF529 DUF5356 PF17309.2 BAM39806.1 - 0.026 14.5 1.1 0.026 14.5 1.1 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5356) DUF3698 PF12479.8 BAM39806.1 - 0.12 13.0 3.1 0.21 12.1 0.3 2.6 2 1 1 3 3 3 0 Protein of unknown function (DUF3698) ComC PF03047.14 BAM39806.1 - 0.24 11.2 1.9 3.4 7.6 0.1 2.7 2 0 0 2 2 2 0 COMC family Spore_III_AF PF09581.10 BAM39806.1 - 3.8 7.5 8.9 16 5.5 8.9 2.0 1 1 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) Ribosomal_L16 PF00252.18 BAM39807.1 - 3.2e-41 140.4 0.1 4.3e-41 140.0 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e ribosomal_L24 PF17136.4 BAM39808.1 - 2.6e-14 53.3 0.1 7.7e-14 51.9 0.0 1.9 2 0 0 2 2 2 1 Ribosomal proteins 50S L24/mitochondrial 39S L24 KOW PF00467.29 BAM39808.1 - 9.8e-05 22.2 0.5 0.0002 21.2 0.5 1.6 1 0 0 1 1 1 1 KOW motif Rep_fac-A_C PF08646.10 BAM39809.1 - 5.5e-27 94.3 0.1 4.3e-26 91.4 0.1 2.1 2 0 0 2 2 2 1 Replication factor-A C terminal domain REPA_OB_2 PF16900.5 BAM39809.1 - 3.4e-25 87.8 0.4 2.1e-23 82.1 0.2 2.6 2 0 0 2 2 2 1 Replication protein A OB domain tRNA_anti-codon PF01336.25 BAM39809.1 - 6e-10 39.0 1.2 2e-08 34.1 0.0 3.2 2 1 1 3 3 3 1 OB-fold nucleic acid binding domain CDC24_OB3 PF17244.2 BAM39809.1 - 0.033 13.9 0.8 8.5 6.0 0.3 2.5 2 2 0 2 2 2 0 Cell division control protein 24, OB domain 3 Prok-RING_1 PF14446.6 BAM39809.1 - 0.083 12.8 0.2 0.23 11.4 0.2 1.7 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 POT1 PF02765.17 BAM39809.1 - 0.16 11.8 0.8 14 5.5 0.1 3.1 3 0 0 3 3 3 0 Telomeric single stranded DNA binding POT1/CDC13 DnaJ_C PF01556.18 BAM39810.1 - 1.5e-35 122.5 0.0 2.4e-35 121.8 0.0 1.4 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 BAM39810.1 - 2.2e-23 82.1 1.3 3.5e-23 81.5 1.3 1.3 1 0 0 1 1 1 1 DnaJ domain DnaJ_CXXCXGXG PF00684.19 BAM39810.1 - 3.1e-10 40.3 10.7 7.8e-10 39.0 10.7 1.7 1 0 0 1 1 1 1 DnaJ central domain Transcrip_act PF04949.13 BAM39810.1 - 0.025 14.4 0.0 0.046 13.6 0.0 1.3 1 0 0 1 1 1 0 Transcriptional activator Anti-TRAP PF15777.5 BAM39810.1 - 0.11 12.5 15.4 1.9 8.5 5.6 3.6 2 2 1 3 3 3 0 Tryptophan RNA-binding attenuator protein inhibitory protein HypA PF01155.19 BAM39810.1 - 3.7 7.6 8.7 5 7.2 0.7 2.9 2 1 1 3 3 3 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Peptidase_C1 PF00112.23 BAM39811.1 - 3.9e-51 174.2 0.1 7.2e-51 173.4 0.1 1.4 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 BAM39811.1 - 9.8e-08 31.2 0.6 1e-06 27.8 0.3 2.2 2 0 0 2 2 2 1 Peptidase C1-like family Inhibitor_I29 PF08246.12 BAM39811.1 - 3.3e-07 30.7 3.2 8.3e-07 29.4 3.2 1.8 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) OrfB_Zn_ribbon PF07282.11 BAM39811.1 - 0.044 13.7 4.0 0.49 10.4 0.1 3.1 3 0 0 3 3 3 0 Putative transposase DNA-binding domain DUF327 PF03885.13 BAM39811.1 - 0.073 13.0 3.6 0.072 13.0 1.4 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF327) DUF2046 PF09755.9 BAM39811.1 - 0.29 10.3 1.7 2.2 7.4 0.2 2.2 2 1 0 2 2 2 0 Uncharacterized conserved protein H4 (DUF2046) Peptidase_C1 PF00112.23 BAM39812.1 - 1.2e-48 166.1 10.9 2.3e-48 165.2 10.9 1.4 1 0 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 BAM39812.1 - 2.6e-07 29.8 3.6 2.6e-06 26.5 0.9 2.6 2 0 0 2 2 2 1 Peptidase C1-like family Inhibitor_I29 PF08246.12 BAM39812.1 - 5.2e-07 30.0 1.6 3.8e-06 27.2 1.6 2.6 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Sigma_reg_N PF13800.6 BAM39812.1 - 0.0058 16.9 0.5 0.077 13.3 0.2 2.3 2 0 0 2 2 2 1 Sigma factor regulator N-terminal DUF3328 PF11807.8 BAM39812.1 - 0.041 13.7 0.8 0.12 12.2 0.0 2.2 3 0 0 3 3 3 0 Domain of unknown function (DUF3328) Peptidase_C1 PF00112.23 BAM39813.1 - 3.3e-53 181.0 5.6 3.3e-53 181.0 5.6 2.0 2 0 0 2 2 2 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 BAM39813.1 - 1.5e-09 38.1 7.7 4e-09 36.8 7.7 1.7 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 BAM39813.1 - 1.2e-06 27.6 6.8 4.9e-06 25.6 0.4 2.9 3 0 0 3 3 3 2 Peptidase C1-like family DUF2407_C PF13373.6 BAM39813.1 - 0.048 13.8 0.1 0.096 12.9 0.1 1.5 1 0 0 1 1 1 0 DUF2407 C-terminal domain Peptidase_C1 PF00112.23 BAM39814.1 - 6.3e-50 170.3 7.3 1.4e-49 169.1 7.3 1.4 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 BAM39814.1 - 2.1e-07 31.3 3.1 5.8e-07 29.8 3.1 1.8 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 BAM39814.1 - 1.2e-06 27.6 3.3 2.5e-05 23.2 1.3 2.2 2 0 0 2 2 2 2 Peptidase C1-like family zf-C2H2_2 PF12756.7 BAM39817.1 - 1.5e-25 89.4 12.5 2.2e-22 79.3 6.3 2.9 3 0 0 3 3 3 2 C2H2 type zinc-finger (2 copies) zf-C2H2_jaz PF12171.8 BAM39817.1 - 5.1e-05 23.4 11.4 0.00085 19.6 3.4 3.3 3 0 0 3 3 3 2 Zinc-finger double-stranded RNA-binding HNH PF01844.23 BAM39817.1 - 0.0043 17.2 3.1 0.091 12.9 0.7 2.5 2 0 0 2 2 2 1 HNH endonuclease zf-C2H2_4 PF13894.6 BAM39817.1 - 0.034 15.0 9.1 0.61 11.1 0.3 3.8 4 0 0 4 4 4 0 C2H2-type zinc finger TackOD1 PF18551.1 BAM39817.1 - 0.053 13.2 2.3 1.2 8.8 0.1 2.4 2 0 0 2 2 2 0 Thaumarchaeal output domain 1 XPA_N PF01286.18 BAM39817.1 - 0.72 9.9 3.7 10 6.3 0.3 2.4 2 0 0 2 2 2 0 XPA protein N-terminal zf-C2H2 PF00096.26 BAM39817.1 - 1.1 9.9 13.8 0.8 10.3 0.9 3.7 4 0 0 4 4 4 0 Zinc finger, C2H2 type DNA_pol_A_exo1 PF01612.20 BAM39818.1 - 1e-19 70.9 0.0 1.4e-19 70.4 0.0 1.1 1 0 0 1 1 1 1 3'-5' exonuclease EF-hand_8 PF13833.6 BAM39818.1 - 0.051 13.4 0.0 1.2 9.0 0.0 2.3 1 1 1 2 2 2 0 EF-hand domain pair YIF1 PF03878.15 BAM39820.1 - 2.3e-10 40.4 10.8 2.2e-05 24.1 0.6 2.5 2 1 0 2 2 2 2 YIF1 LSM PF01423.22 BAM39821.1 - 2.9e-18 65.3 0.2 3.2e-18 65.2 0.2 1.1 1 0 0 1 1 1 1 LSM domain AMP-binding PF00501.28 BAM39822.1 - 8e-67 225.7 0.0 1.1e-66 225.2 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 BAM39822.1 - 0.00076 20.4 0.1 0.0019 19.1 0.1 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DUF4911 PF16256.5 BAM39823.1 - 0.0096 15.9 0.1 0.024 14.6 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4911) HUN PF08729.10 BAM39824.1 - 7.5e-10 38.7 1.9 2.9e-09 36.8 1.9 2.1 1 0 0 1 1 1 1 HPC2 and ubinuclein domain UCH PF00443.29 BAM39825.1 - 3.8e-40 138.0 4.4 6.6e-40 137.2 4.4 1.4 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 BAM39825.1 - 1.5e-20 74.1 10.9 3.5e-20 72.9 10.9 1.6 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase CNDH2_M PF16869.5 BAM39825.1 - 0.0057 17.3 0.1 0.0057 17.3 0.1 1.6 2 0 0 2 2 2 1 PF16858 PH_10 PF15411.6 BAM39825.1 - 0.13 12.5 5.6 0.34 11.2 0.8 2.4 2 0 0 2 2 2 0 Pleckstrin homology domain MCM PF00493.23 BAM39827.1 - 8.5e-79 263.8 0.2 3.4e-41 140.8 0.0 2.6 2 1 1 3 3 3 2 MCM P-loop domain MCM_OB PF17207.3 BAM39827.1 - 1.9e-34 118.2 2.4 3.8e-34 117.3 2.4 1.5 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 BAM39827.1 - 2e-25 89.0 0.0 5.3e-25 87.7 0.0 1.8 1 0 0 1 1 1 1 MCM AAA-lid domain MCM6_C PF18263.1 BAM39827.1 - 7.1e-06 26.2 0.3 7.1e-06 26.2 0.3 2.5 2 0 0 2 2 2 1 MCM6 C-terminal winged-helix domain APAF1_C PF17908.1 BAM39827.1 - 0.043 13.8 0.2 0.28 11.2 0.1 2.4 2 0 0 2 2 2 0 APAF-1 helical domain Mg_chelatase PF01078.21 BAM39827.1 - 0.1 12.0 0.0 0.34 10.3 0.0 1.9 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI Di19_C PF14571.6 BAM39827.1 - 0.27 11.8 1.8 0.74 10.4 0.0 2.5 2 0 0 2 2 2 0 Stress-induced protein Di19, C-terminal DUF5097 PF17020.5 BAM39827.1 - 0.46 10.8 3.3 3.5 8.0 0.1 3.5 3 1 0 3 3 3 0 Domain of unknown function (DUF5097) Secretin_N_2 PF07655.13 BAM39827.1 - 0.56 10.8 6.9 7.4 7.2 0.2 2.8 3 0 0 3 3 3 0 Secretin N-terminal domain PIG-X PF08320.12 BAM39829.1 - 2e-08 34.4 0.5 9.7e-07 28.9 0.5 2.3 1 1 0 1 1 1 1 PIG-X / PBN1 TctB PF07331.11 BAM39830.1 - 0.0099 16.2 0.0 0.013 15.8 0.0 1.1 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctB family DUF3169 PF11368.8 BAM39830.1 - 0.046 13.2 0.0 0.057 12.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3169) DUF3671 PF12420.8 BAM39830.1 - 0.066 13.3 0.1 0.09 12.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function TMEM251 PF15190.6 BAM39830.1 - 0.068 13.1 0.0 0.15 12.0 0.0 1.5 1 1 1 2 2 2 0 Transmembrane protein 251 SMC_N PF02463.19 BAM39831.1 - 1.7e-51 174.8 60.4 4.5e-50 170.1 60.4 3.6 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.13 BAM39831.1 - 6e-19 68.5 0.1 1.9e-18 66.9 0.1 1.9 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_21 PF13304.6 BAM39831.1 - 1.9e-13 50.9 18.4 5.4e-07 29.7 0.0 4.5 4 1 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 BAM39831.1 - 1.4e-12 48.5 17.4 1.4e-12 48.5 17.4 7.7 2 2 2 4 4 3 1 AAA domain ATG16 PF08614.11 BAM39831.1 - 5.9e-08 33.2 100.2 3.9e-06 27.2 20.6 7.4 3 3 4 7 7 7 3 Autophagy protein 16 (ATG16) AAA_15 PF13175.6 BAM39831.1 - 1.5e-07 31.5 21.3 1.5e-07 31.5 21.3 4.9 2 2 2 4 4 1 1 AAA ATPase domain AAA_29 PF13555.6 BAM39831.1 - 1.2e-06 28.1 0.0 2.5e-06 27.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain PaaX_C PF08223.11 BAM39831.1 - 0.16 12.2 3.6 0.9 9.8 0.6 3.5 2 0 0 2 2 2 0 PaaX-like protein C-terminal domain AAA_16 PF13191.6 BAM39831.1 - 0.16 12.3 7.2 3 8.2 1.7 3.6 4 0 0 4 4 4 0 AAA ATPase domain Spc7 PF08317.11 BAM39831.1 - 1.2 7.9 119.7 0.15 11.0 26.8 7.1 3 2 6 9 9 9 0 Spc7 kinetochore protein AAA_22 PF13401.6 BAM39831.1 - 1.9 8.7 0.0 1.9 8.7 0.0 4.0 5 0 0 5 5 5 0 AAA domain DUF724 PF05266.14 BAM39831.1 - 2.4 7.9 90.7 0.68 9.7 8.2 8.0 3 2 3 7 7 7 0 Protein of unknown function (DUF724) DUF812 PF05667.11 BAM39831.1 - 8.5 5.1 111.6 0.076 11.9 42.7 5.2 2 2 2 4 4 4 0 Protein of unknown function (DUF812) RNA_pol_Rpc4 PF05132.14 BAM39832.1 - 1.8e-18 67.4 3.5 1.1e-16 61.6 0.2 3.0 2 1 0 2 2 2 1 RNA polymerase III RPC4 Kelch_4 PF13418.6 BAM39834.1 - 1.6e-17 63.2 7.9 3.7e-06 26.8 0.0 6.3 6 0 0 6 6 6 4 Galactose oxidase, central domain Kelch_3 PF13415.6 BAM39834.1 - 4.5e-15 55.5 5.2 5.5e-05 23.3 0.1 6.7 7 0 0 7 7 7 2 Galactose oxidase, central domain Kelch_5 PF13854.6 BAM39834.1 - 1.9e-11 43.7 9.0 0.025 14.6 0.0 6.7 6 2 0 6 6 6 3 Kelch motif HATPase_c_3 PF13589.6 BAM39834.1 - 1.7e-10 40.9 0.0 3.4e-10 39.9 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Kelch_6 PF13964.6 BAM39834.1 - 3.9e-09 36.5 6.7 0.0066 16.7 0.0 5.2 4 1 1 5 5 5 2 Kelch motif Kelch_1 PF01344.25 BAM39834.1 - 1.1e-07 31.3 2.9 0.003 17.1 0.0 3.8 3 0 0 3 3 3 2 Kelch motif HATPase_c PF02518.26 BAM39834.1 - 7.9e-06 26.4 0.0 1.9e-05 25.2 0.0 1.6 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Kelch_2 PF07646.15 BAM39834.1 - 4.5e-05 23.2 4.6 0.0024 17.8 0.0 4.0 4 0 0 4 4 4 1 Kelch motif zf-CCCH PF00642.24 BAM39837.1 - 0.0012 18.7 15.7 0.13 12.2 2.6 3.9 3 1 0 3 3 3 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 BAM39837.1 - 0.06 13.4 0.5 0.06 13.4 0.5 4.9 4 1 0 4 4 4 0 Zinc finger domain Fer4_20 PF14691.6 BAM39837.1 - 0.38 10.6 4.7 0.76 9.6 4.7 1.6 1 0 0 1 1 1 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster zf-CCCH_4 PF18044.1 BAM39837.1 - 6.4 6.7 15.6 0.77 9.6 0.4 3.7 3 1 0 3 3 3 0 CCCH-type zinc finger DER1 PF04511.15 BAM39838.1 - 1.1e-41 142.9 15.2 1.2e-41 142.7 15.2 1.0 1 0 0 1 1 1 1 Der1-like family EGF_MSP1_1 PF12946.7 BAM39839.1 - 0.0096 15.9 2.3 0.019 15.0 2.3 1.5 1 0 0 1 1 1 1 MSP1 EGF domain 1 OAR PF03826.17 BAM39839.1 - 0.089 12.7 0.9 15 5.6 0.1 2.6 2 0 0 2 2 2 0 OAR domain End_tail_spike PF12219.8 BAM39839.1 - 0.13 12.3 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 Catalytic domain of bacteriophage endosialidase EB PF01683.18 BAM39839.1 - 0.22 11.8 8.1 0.43 10.9 6.3 2.2 2 0 0 2 2 2 0 EB module Plasmod_Pvs28 PF06247.11 BAM39839.1 - 0.51 10.7 3.8 1.4 9.3 3.8 1.8 1 0 0 1 1 1 0 Pvs28 EGF domain DEAD PF00270.29 BAM39840.1 - 1.9e-41 141.7 1.4 2.4e-41 141.4 0.3 1.7 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM39840.1 - 6.4e-32 110.2 1.0 2.9e-31 108.1 0.1 2.3 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM39840.1 - 1.9e-05 24.8 0.0 3.7e-05 23.8 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_30 PF13604.6 BAM39840.1 - 0.00064 19.5 0.0 0.0011 18.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain Helicase_RecD PF05127.14 BAM39840.1 - 0.00071 19.5 0.0 0.0015 18.4 0.0 1.5 1 0 0 1 1 1 1 Helicase AAA_19 PF13245.6 BAM39840.1 - 0.00081 19.7 0.1 0.0063 16.9 0.0 2.1 2 0 0 2 2 2 1 AAA domain tRNA-synt_1b PF00579.25 BAM39840.1 - 0.015 14.7 0.0 0.031 13.6 0.0 1.5 1 0 0 1 1 1 0 tRNA synthetases class I (W and Y) HTH_Tnp_1_2 PF13022.6 BAM39840.1 - 0.033 14.3 0.4 0.14 12.3 0.1 2.1 2 0 0 2 2 2 0 Helix-turn-helix of insertion element transposase CMS1 PF14617.6 BAM39840.1 - 0.045 13.1 0.0 0.1 11.9 0.0 1.5 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit DUF1198 PF06711.11 BAM39840.1 - 0.066 13.3 0.2 0.23 11.5 0.1 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1198) tRNA_bind PF01588.20 BAM39841.1 - 3.9e-27 94.2 0.2 6.9e-27 93.4 0.2 1.4 1 0 0 1 1 1 1 Putative tRNA binding domain GST_C PF00043.25 BAM39841.1 - 3.8e-06 27.0 1.6 4.4e-06 26.8 0.0 1.9 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 BAM39841.1 - 6.6e-05 23.0 0.9 0.00011 22.3 0.0 1.8 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain GST_C_2 PF13410.6 BAM39841.1 - 0.0013 18.8 0.0 0.0025 17.8 0.0 1.5 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_6 PF17171.4 BAM39841.1 - 0.023 14.5 0.0 0.056 13.3 0.0 1.7 1 0 0 1 1 1 0 Glutathione S-transferase, C-terminal domain Dehydratase_hem PF13816.6 BAM39841.1 - 0.14 11.5 0.0 0.22 10.9 0.0 1.3 1 0 0 1 1 1 0 Haem-containing dehydratase OHA PF14418.6 BAM39842.1 - 1.7e-18 66.2 0.2 7.1e-18 64.2 0.0 2.1 2 0 0 2 2 2 1 OST-HTH Associated domain OST-HTH PF12872.7 BAM39842.1 - 2.9e-07 30.2 0.0 5.3e-07 29.4 0.0 1.5 1 0 0 1 1 1 1 OST-HTH/LOTUS domain His_Phos_1 PF00300.22 BAM39843.1 - 5.1e-06 26.3 0.0 0.16 11.6 0.0 3.3 3 1 0 3 3 3 3 Histidine phosphatase superfamily (branch 1) Dzip-like_N PF13815.6 BAM39843.1 - 0.14 12.1 0.0 8.7 6.3 0.0 2.4 2 0 0 2 2 2 0 Iguana/Dzip1-like DAZ-interacting protein N-terminal DUF758 PF05527.11 BAM39844.1 - 0.14 12.2 1.2 1.6 8.7 0.1 2.6 1 1 2 3 3 3 0 Domain of unknown function (DUF758) Asp_protease PF09668.10 BAM39846.1 - 2.4e-49 166.3 0.9 4e-49 165.5 0.9 1.4 1 0 0 1 1 1 1 Aspartyl protease gag-asp_proteas PF13975.6 BAM39846.1 - 1.2e-21 77.0 0.2 3e-21 75.8 0.2 1.7 1 0 0 1 1 1 1 gag-polyprotein putative aspartyl protease Asp_protease_2 PF13650.6 BAM39846.1 - 6.6e-11 42.7 0.1 1.4e-10 41.6 0.1 1.6 1 0 0 1 1 1 1 Aspartyl protease RVP PF00077.20 BAM39846.1 - 6.6e-06 26.4 0.0 1.3e-05 25.5 0.0 1.5 1 0 0 1 1 1 1 Retroviral aspartyl protease RVP_2 PF08284.11 BAM39846.1 - 0.00015 21.5 0.2 0.0003 20.6 0.2 1.4 1 0 0 1 1 1 1 Retroviral aspartyl protease ubiquitin PF00240.23 BAM39846.1 - 0.0003 20.5 0.3 0.001 18.8 0.0 1.9 2 0 0 2 2 2 1 Ubiquitin family DUF4945 PF16303.5 BAM39846.1 - 0.13 12.2 0.5 0.74 9.8 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4945) FAST_1 PF06743.15 BAM39848.1 - 1e-09 38.2 5.8 0.062 13.2 0.0 6.8 6 0 0 6 6 6 2 FAST kinase-like protein, subdomain 1 RAP PF08373.10 BAM39848.1 - 0.016 15.3 0.1 0.056 13.5 0.1 2.0 1 0 0 1 1 1 0 RAP domain CSN8_PSD8_EIF3K PF10075.9 BAM39848.1 - 0.058 13.4 4.6 0.18 11.8 0.3 3.0 3 0 0 3 3 3 0 CSN8/PSMD8/EIF3K family GSCFA PF08885.11 BAM39848.1 - 0.058 13.0 2.4 0.21 11.2 0.6 2.4 2 0 0 2 2 2 0 GSCFA family CREPT PF16566.5 BAM39848.1 - 0.058 13.6 0.2 0.34 11.1 0.0 2.3 2 0 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour DUF3958 PF13125.6 BAM39848.1 - 0.099 12.8 6.9 0.054 13.7 1.2 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3958) Cnd1 PF12717.7 BAM39848.1 - 0.17 11.9 15.5 1 9.4 0.1 4.0 3 2 0 3 3 3 0 non-SMC mitotic condensation complex subunit 1 FliG_N PF14842.6 BAM39848.1 - 0.32 11.6 7.4 2 9.0 0.2 4.4 5 1 0 6 6 6 0 FliG N-terminal domain Mic1 PF07035.12 BAM39849.1 - 1.5e-10 41.1 2.7 3.2e-10 40.0 2.7 1.5 1 0 0 1 1 1 1 Colon cancer-associated protein Mic1-like PK PF00224.21 BAM39851.1 - 3.4e-88 295.9 0.0 2.1e-49 168.3 0.1 2.2 2 0 0 2 2 2 2 Pyruvate kinase, barrel domain PK_C PF02887.16 BAM39851.1 - 4.4e-05 23.7 0.0 0.00012 22.3 0.0 1.7 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain Hemocyanin_N PF03722.14 BAM39851.1 - 0.0095 16.5 0.2 0.027 15.0 0.2 1.7 1 0 0 1 1 1 1 Hemocyanin, all-alpha domain ComR_TPR PF18710.1 BAM39852.1 - 0.015 14.8 0.2 0.035 13.7 0.1 1.6 1 1 0 1 1 1 0 ComR tetratricopeptide PseudoU_synth_2 PF00849.22 BAM39853.1 - 0.00017 21.7 0.0 0.00025 21.2 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase AMP-binding_C_2 PF14535.6 BAM39854.1 - 0.88 9.9 7.6 1.3 9.4 0.1 3.1 3 0 0 3 3 3 0 AMP-binding enzyme C-terminal domain Pkinase PF00069.25 BAM39855.1 - 4e-62 210.0 0.0 6.1e-62 209.4 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM39855.1 - 3.4e-33 115.0 0.0 5.1e-33 114.5 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 BAM39855.1 - 0.0019 17.6 0.0 0.0042 16.4 0.0 1.6 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 BAM39855.1 - 0.15 10.8 4.1 2.8 6.6 0.0 2.3 2 1 0 2 2 2 0 Fungal protein kinase SPECT1 PF18680.1 BAM39855.1 - 0.29 10.8 4.2 0.11 12.1 1.2 1.9 2 0 0 2 2 2 0 Plasmodium host cell traversal SPECT1 ORC_WH_C PF18137.1 BAM39855.1 - 1.1 9.3 5.2 4.9 7.2 5.2 2.0 1 1 0 1 1 1 0 Origin recognition complex winged helix C-terminal Peptidase_C1 PF00112.23 BAM39856.1 - 2.4e-30 106.3 2.1 2.5e-30 106.2 0.0 1.9 2 1 1 3 3 3 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 BAM39856.1 - 4.5e-09 36.6 9.9 1.8e-08 34.7 9.4 2.4 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 BAM39856.1 - 0.0061 15.4 0.1 0.0061 15.4 0.1 2.3 2 1 1 3 3 3 1 Peptidase C1-like family Mito_carr PF00153.27 BAM39858.1 - 2.5e-67 222.9 6.6 2.2e-24 85.2 0.2 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein GtrA PF04138.14 BAM39858.1 - 0.17 12.1 1.8 0.67 10.2 1.8 2.1 1 1 0 1 1 1 0 GtrA-like protein ubiquitin PF00240.23 BAM39859.1 - 1.2e-25 89.0 7.2 3.9e-25 87.4 3.9 2.2 2 0 0 2 2 2 1 Ubiquitin family Rad60-SLD PF11976.8 BAM39859.1 - 1.1e-15 57.2 3.5 1.1e-15 57.2 3.5 2.0 2 0 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_4 PF18036.1 BAM39859.1 - 2.7e-06 27.3 5.3 0.0027 17.7 3.1 2.8 2 1 0 2 2 2 1 Ubiquitin-like domain Rad60-SLD_2 PF13881.6 BAM39859.1 - 0.00015 21.9 0.8 0.00057 20.0 0.4 2.1 2 1 0 2 2 2 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_5 PF18037.1 BAM39859.1 - 0.00055 20.2 9.5 0.19 12.1 2.8 2.4 1 1 2 3 3 3 2 Ubiquitin-like domain Ubiquitin_2 PF14560.6 BAM39859.1 - 0.002 18.5 1.0 0.002 18.5 1.0 2.4 2 2 0 2 2 2 1 Ubiquitin-like domain USP7_C2 PF14533.6 BAM39859.1 - 0.0041 16.9 1.2 0.15 11.7 0.2 2.1 1 1 0 2 2 2 1 Ubiquitin-specific protease C-terminal TBK1_ULD PF18396.1 BAM39859.1 - 0.0085 16.0 0.6 0.015 15.2 0.2 1.5 2 0 0 2 2 2 1 TANK binding kinase 1 ubiquitin-like domain DUF2407 PF10302.9 BAM39859.1 - 0.047 14.3 0.4 0.14 12.7 0.1 1.9 1 1 1 2 2 2 0 DUF2407 ubiquitin-like domain RTT107_BRCT_6 PF16771.5 BAM39859.1 - 0.084 13.0 3.1 1.3 9.2 0.2 2.4 1 1 1 2 2 2 0 Regulator of Ty1 transposition protein 107 BRCT domain DUF2604 PF10790.9 BAM39859.1 - 0.12 12.7 0.3 0.63 10.4 0.3 2.1 1 1 0 1 1 1 0 Protein of Unknown function (DUF2604) Dynamin_M PF01031.20 BAM39860.1 - 1.6e-87 293.3 0.5 2.9e-87 292.5 0.0 1.6 2 0 0 2 2 2 1 Dynamin central region Dynamin_N PF00350.23 BAM39860.1 - 2.7e-48 164.2 0.0 6.3e-48 163.0 0.0 1.6 1 0 0 1 1 1 1 Dynamin family GED PF02212.18 BAM39860.1 - 9.1e-30 102.7 4.9 3.7e-29 100.7 4.9 2.1 1 0 0 1 1 1 1 Dynamin GTPase effector domain MMR_HSR1 PF01926.23 BAM39860.1 - 1.2e-05 25.4 0.1 9.5e-05 22.5 0.1 2.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase Baculo_p74 PF04583.12 BAM39860.1 - 0.012 15.1 0.3 0.033 13.7 0.0 1.8 2 0 0 2 2 2 0 Baculoviridae p74 conserved region Condensin2nSMC PF12422.8 BAM39860.1 - 0.038 14.2 2.5 0.51 10.5 0.4 2.9 3 0 0 3 3 3 0 Condensin II non structural maintenance of chromosomes subunit AAA_21 PF13304.6 BAM39860.1 - 0.07 12.9 0.0 0.13 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_16 PF13191.6 BAM39860.1 - 0.16 12.4 0.0 0.51 10.7 0.0 1.8 1 1 0 1 1 1 0 AAA ATPase domain ERCC3_RAD25_C PF16203.5 BAM39861.1 - 1.1e-109 365.4 0.5 1.8e-109 364.8 0.5 1.3 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase Helicase_C_3 PF13625.6 BAM39861.1 - 8.7e-29 100.2 0.0 2.3e-28 98.9 0.0 1.7 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM39861.1 - 1.5e-16 60.9 0.0 3.4e-16 59.7 0.0 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 BAM39861.1 - 7.5e-12 45.6 0.4 6.7e-11 42.5 0.1 2.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain FAD_binding_1 PF00667.20 BAM39861.1 - 0.011 15.3 0.7 0.39 10.2 0.1 3.0 3 0 0 3 3 3 0 FAD binding domain AAA_34 PF13872.6 BAM39861.1 - 0.012 14.5 0.0 0.02 13.8 0.0 1.2 1 0 0 1 1 1 0 P-loop containing NTP hydrolase pore-1 Mt_ATP_synt PF15704.5 BAM39861.1 - 0.072 13.0 0.3 0.14 12.0 0.3 1.4 1 0 0 1 1 1 0 Mitochondrial ATP synthase subunit Radical_SAM_C PF16199.5 BAM39863.1 - 1.4e-20 73.1 0.1 3.4e-20 71.9 0.1 1.7 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Radical_SAM PF04055.21 BAM39863.1 - 1.5e-15 57.9 0.1 4.4e-15 56.5 0.1 1.8 1 0 0 1 1 1 1 Radical SAM superfamily Acetyltransf_10 PF13673.7 BAM39863.1 - 0.017 15.1 0.0 0.049 13.6 0.0 1.8 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 BAM39863.1 - 0.046 13.9 1.3 0.14 12.4 0.6 2.2 2 0 0 2 2 2 0 Acetyltransferase (GNAT) family Picorna_P3A PF06363.11 BAM39864.1 - 0.0039 17.0 0.0 0.0072 16.2 0.0 1.5 1 0 0 1 1 1 1 Picornaviridae P3A protein HSP70 PF00012.20 BAM39865.1 - 2.5e-255 848.3 6.0 2.9e-255 848.1 6.0 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 BAM39865.1 - 1.5e-16 60.2 0.1 5.2e-15 55.1 0.1 2.3 2 0 0 2 2 2 1 MreB/Mbl protein FtsA PF14450.6 BAM39865.1 - 0.0011 19.4 3.1 0.99 9.9 0.0 3.8 3 2 0 3 3 3 1 Cell division protein FtsA DDR PF08841.10 BAM39865.1 - 0.0014 17.7 0.3 0.071 12.1 0.2 2.4 2 0 0 2 2 2 1 Diol dehydratase reactivase ATPase-like domain Hydantoinase_A PF01968.18 BAM39865.1 - 0.13 11.5 6.2 0.13 11.5 0.8 3.2 3 1 1 4 4 4 0 Hydantoinase/oxoprolinase FGGY_C PF02782.16 BAM39865.1 - 0.13 11.9 0.0 0.54 10.0 0.0 2.0 2 0 0 2 2 2 0 FGGY family of carbohydrate kinases, C-terminal domain Mago_nashi PF02792.14 BAM39865.1 - 0.22 11.6 1.8 1.7 8.8 0.0 2.3 2 0 0 2 2 2 0 Mago nashi protein GBR_NSP5 PF17580.2 BAM39865.1 - 0.53 10.1 5.3 1.4 8.8 4.7 1.9 2 0 0 2 2 2 0 Group B Rotavirus Non-structural protein 5 zf-C3HC4 PF00097.25 BAM39867.1 - 2.9e-09 36.6 9.0 7.2e-09 35.4 9.0 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 BAM39867.1 - 5.2e-09 35.8 7.7 1.1e-08 34.7 7.7 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 BAM39867.1 - 8.4e-09 35.2 8.9 1.6e-08 34.2 8.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 BAM39867.1 - 1.6e-07 31.5 9.5 3.6e-07 30.4 9.5 1.6 1 0 0 1 1 1 1 Ring finger domain zf-RING_5 PF14634.6 BAM39867.1 - 6.5e-07 29.2 10.2 1.4e-06 28.2 10.2 1.6 1 0 0 1 1 1 1 zinc-RING finger domain Prok-RING_4 PF14447.6 BAM39867.1 - 1.5e-06 27.9 8.8 3e-06 27.0 8.8 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_UBOX PF13445.6 BAM39867.1 - 3.8e-05 23.6 8.8 8.7e-05 22.5 8.8 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_4 PF15227.6 BAM39867.1 - 7.7e-05 22.8 7.5 0.00016 21.8 7.5 1.6 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-rbx1 PF12678.7 BAM39867.1 - 0.0025 18.0 4.9 0.0092 16.2 4.9 2.0 1 0 0 1 1 1 1 RING-H2 zinc finger domain HALZ PF02183.18 BAM39867.1 - 0.0033 17.6 14.6 0.027 14.7 0.9 5.2 5 0 0 5 5 5 1 Homeobox associated leucine zipper HJURP_C PF12347.8 BAM39867.1 - 0.0055 16.7 0.1 2 8.5 0.0 3.0 2 0 0 2 2 2 1 Holliday junction regulator protein family C-terminal repeat zf-RING_4 PF14570.6 BAM39867.1 - 0.006 16.4 5.9 0.013 15.3 5.9 1.6 1 0 0 1 1 1 1 RING/Ubox like zinc-binding domain DivIC PF04977.15 BAM39867.1 - 0.0061 16.3 10.5 7.7 6.4 0.2 4.9 4 0 0 4 4 4 0 Septum formation initiator zf-RING_6 PF14835.6 BAM39867.1 - 0.013 15.4 5.2 0.026 14.4 5.2 1.4 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-UDP PF14569.6 BAM39867.1 - 0.021 14.9 3.9 0.06 13.5 3.9 1.8 1 0 0 1 1 1 0 Zinc-binding RING-finger Baculo_PEP_C PF04513.12 BAM39867.1 - 0.28 11.2 0.9 45 4.1 0.0 3.1 3 1 0 3 3 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Dak2 PF02734.17 BAM39867.1 - 0.34 10.8 4.0 0.29 11.0 0.8 2.5 1 1 1 2 2 2 0 DAK2 domain bZIP_1 PF00170.21 BAM39867.1 - 0.43 10.7 24.9 1.1 9.4 0.1 5.7 4 1 1 5 5 5 0 bZIP transcription factor zf-RING_11 PF17123.5 BAM39867.1 - 0.56 10.0 9.3 0.28 11.0 1.4 2.7 2 0 0 2 2 2 0 RING-like zinc finger DUF4472 PF14739.6 BAM39867.1 - 0.84 10.4 30.6 0.29 11.9 6.4 4.4 5 0 0 5 5 4 0 Domain of unknown function (DUF4472) DUF465 PF04325.13 BAM39867.1 - 1.9 8.6 6.6 33 4.6 2.4 3.6 3 0 0 3 3 3 0 Protein of unknown function (DUF465) YabA PF06156.13 BAM39867.1 - 3.1 8.5 29.4 2.2 8.9 2.5 4.9 2 2 2 4 4 4 0 Initiation control protein YabA UPF0242 PF06785.11 BAM39867.1 - 3.5 7.7 32.4 0.95 9.5 3.7 4.4 3 1 1 4 4 4 0 Uncharacterised protein family (UPF0242) N-terminus MCC-bdg_PDZ PF10506.9 BAM39867.1 - 4.7 7.3 9.4 4.5 7.4 0.4 3.8 3 0 0 3 3 3 0 PDZ domain of MCC-2 bdg protein for Usher syndrome GAS PF13851.6 BAM39867.1 - 4.8 6.5 36.0 0.15 11.4 6.1 4.3 2 1 1 3 3 3 0 Growth-arrest specific micro-tubule binding RTBV_P46 PF06216.11 BAM39867.1 - 5.3 5.8 9.2 7.3 5.4 0.4 3.1 3 1 0 3 3 3 0 Rice tungro bacilliform virus P46 protein Fib_alpha PF08702.10 BAM39867.1 - 6.2 7.0 19.5 1.1 9.4 1.0 4.0 3 1 2 5 5 5 0 Fibrinogen alpha/beta chain family FYVE PF01363.21 BAM39867.1 - 8.9 6.5 13.4 63 3.8 12.1 2.9 2 1 1 3 3 3 0 FYVE zinc finger ATG16 PF08614.11 BAM39867.1 - 9.2 6.4 41.6 5.1 7.3 6.5 4.5 2 2 1 3 3 3 0 Autophagy protein 16 (ATG16) SRA PF18491.1 BAM39868.1 - 0.016 15.3 0.4 0.016 15.3 0.4 2.1 2 1 0 2 2 2 0 SET and RING associated domain Lactamase_B_6 PF16661.5 BAM39869.1 - 3.1e-19 69.2 0.0 5.7e-19 68.3 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Beta-Casp PF10996.8 BAM39869.1 - 1.8e-06 28.2 0.0 5.3e-06 26.7 0.1 1.7 2 0 0 2 2 2 1 Beta-Casp domain Lactamase_B PF00753.27 BAM39869.1 - 0.0066 16.5 0.0 0.012 15.7 0.0 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily MGS PF02142.22 BAM39869.1 - 0.082 13.1 0.0 0.21 11.8 0.0 1.7 1 0 0 1 1 1 0 MGS-like domain AAA_23 PF13476.6 BAM39872.1 - 1.3e-08 35.6 107.6 1.2e-07 32.5 46.1 6.1 1 1 2 3 3 1 1 AAA domain DHR10 PF18595.1 BAM39872.1 - 0.0008 19.5 8.3 0.0008 19.5 8.3 6.9 4 3 1 6 6 6 1 Designed helical repeat protein 10 domain AAA_15 PF13175.6 BAM39872.1 - 0.089 12.5 0.1 0.089 12.5 0.1 5.4 2 1 3 5 5 3 0 AAA ATPase domain Spc7 PF08317.11 BAM39872.1 - 0.4 9.5 86.5 0.0093 14.9 7.8 6.4 2 2 3 6 6 6 0 Spc7 kinetochore protein TPR_MLP1_2 PF07926.12 BAM39872.1 - 2.4 8.2 68.1 0.24 11.5 4.4 7.1 4 1 2 6 6 6 0 TPR/MLP1/MLP2-like protein KfrA_N PF11740.8 BAM39872.1 - 2.5 8.8 8.6 13 6.5 0.9 4.2 5 0 0 5 5 5 0 Plasmid replication region DNA-binding N-term SlyX PF04102.12 BAM39872.1 - 4.1 8.1 38.1 0.34 11.5 1.1 8.4 6 2 2 8 8 8 0 SlyX PspA_IM30 PF04012.12 BAM39872.1 - 4.4 6.8 41.1 1.9 8.0 4.4 6.5 2 2 5 7 7 7 0 PspA/IM30 family Fez1 PF06818.15 BAM39872.1 - 4.5 7.7 70.0 3.5 8.0 7.1 5.9 2 2 2 5 5 5 0 Fez1 AHSP PF09236.10 BAM39872.1 - 5.7 7.5 9.9 0.46 11.0 0.1 4.4 5 1 0 5 5 5 0 Alpha-haemoglobin stabilising protein QueC PF06508.13 BAM39872.1 - 6.8 6.1 8.2 0.28 10.6 0.1 2.7 3 1 1 4 4 4 0 Queuosine biosynthesis protein QueC PI3K_P85_iSH2 PF16454.5 BAM39872.1 - 8.7 5.9 72.1 0.21 11.2 11.6 7.1 3 2 4 7 7 7 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain SMC_N PF02463.19 BAM39873.1 - 7.2e-09 35.4 0.1 8.8e-09 35.1 0.1 1.1 1 0 0 1 1 1 1 RecF/RecN/SMC N terminal domain SbcCD_C PF13558.6 BAM39873.1 - 6.8e-05 23.0 0.0 0.00016 21.9 0.0 1.6 2 0 0 2 2 2 1 Putative exonuclease SbcCD, C subunit AAA_15 PF13175.6 BAM39873.1 - 0.00025 20.9 0.0 0.00028 20.7 0.0 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 BAM39873.1 - 0.0067 16.3 0.0 0.0077 16.1 0.0 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system Baculo_E25 PF05274.11 BAM39873.1 - 0.033 14.0 0.4 0.038 13.8 0.4 1.1 1 0 0 1 1 1 0 Occlusion-derived virus envelope protein E25 DUF3732 PF12532.8 BAM39873.1 - 0.065 12.8 0.1 0.1 12.2 0.1 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3732) RRM_1 PF00076.22 BAM39874.1 - 4.6e-09 36.0 0.0 7e-09 35.4 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 BAM39874.1 - 0.007 16.3 0.0 0.012 15.5 0.0 1.4 1 0 0 1 1 1 1 Nup53/35/40-type RNA recognition motif UQ_con PF00179.26 BAM39875.1 - 1.6e-41 141.2 0.0 1.9e-41 141.0 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 BAM39875.1 - 0.034 14.4 0.1 0.045 14.0 0.1 1.3 1 0 0 1 1 1 0 RWD domain Coatomer_WDAD PF04053.14 BAM39876.1 - 6.6e-52 177.0 10.9 6.6e-52 177.0 10.9 1.8 2 0 0 2 2 2 1 Coatomer WD associated region WD40 PF00400.32 BAM39876.1 - 1.8e-32 110.9 14.4 2.7e-06 28.0 0.0 8.1 8 0 0 8 8 8 5 WD domain, G-beta repeat COPI_C PF06957.11 BAM39876.1 - 7.4e-27 94.1 2.6 1.2e-26 93.4 2.6 1.3 1 0 0 1 1 1 1 Coatomer (COPI) alpha subunit C-terminus Nup160 PF11715.8 BAM39876.1 - 0.00011 21.0 3.6 0.53 8.9 0.0 3.4 2 1 1 3 3 3 3 Nucleoporin Nup120/160 ANAPC4_WD40 PF12894.7 BAM39876.1 - 0.0011 19.3 0.1 0.46 10.8 0.0 4.0 3 0 0 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain FA_FANCE PF11510.8 BAM39876.1 - 0.043 13.2 0.0 0.091 12.1 0.0 1.4 1 0 0 1 1 1 0 Fanconi Anaemia group E protein FANCE TPR_2 PF07719.17 BAM39876.1 - 0.078 13.1 0.5 0.96 9.7 0.1 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat MRP-L27 PF09809.9 BAM39877.1 - 6.3e-07 29.2 0.0 7.5e-07 29.0 0.0 1.1 1 0 0 1 1 1 1 Mitochondrial ribosomal protein L27 AP2 PF00847.20 BAM39879.1 - 4e-08 33.4 5.4 6e-05 23.2 1.0 2.7 2 0 0 2 2 2 2 AP2 domain XRN_N PF03159.18 BAM39881.1 - 2.2e-84 282.7 0.0 4.1e-84 281.8 0.0 1.5 1 0 0 1 1 1 1 XRN 5'-3' exonuclease N-terminus XRN_M PF17846.1 BAM39881.1 - 8.4e-42 143.6 3.3 1.4e-22 80.3 0.1 3.0 2 2 0 2 2 2 2 Xrn1 helical domain SH3_12 PF18129.1 BAM39881.1 - 2.4e-23 82.0 0.2 5.7e-23 80.8 0.2 1.7 1 0 0 1 1 1 1 Xrn1 SH3-like domain XRN1_D1 PF18332.1 BAM39881.1 - 3.5e-07 30.2 0.0 1.2e-06 28.4 0.0 1.9 1 0 0 1 1 1 1 Exoribonuclease Xrn1 D1 domain MACPF PF01823.19 BAM39882.1 - 8e-45 153.5 8.4 8e-45 153.5 8.4 3.3 3 1 1 4 4 4 1 MAC/Perforin domain BUD22 PF09073.10 BAM39882.1 - 0.025 14.0 29.2 0.044 13.1 29.2 1.4 1 0 0 1 1 1 0 BUD22 tRNA-synt_2d PF01409.20 BAM39883.1 - 1.7e-34 119.4 0.5 4.5e-30 104.9 0.5 3.2 1 1 0 1 1 1 1 tRNA synthetases class II core domain (F) FDX-ACB PF03147.14 BAM39883.1 - 8.2e-17 61.4 0.0 2.2e-16 60.0 0.0 1.8 1 0 0 1 1 1 1 Ferredoxin-fold anticodon binding domain C2 PF00168.30 BAM39884.1 - 2.3e-09 37.5 0.1 6e-08 32.9 0.0 2.9 2 1 0 2 2 2 1 C2 domain DHO_dh PF01180.21 BAM39885.1 - 1.6e-89 300.0 0.1 1.9e-89 299.8 0.1 1.1 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase NMO PF03060.15 BAM39885.1 - 7.1e-05 22.3 0.1 0.00011 21.7 0.1 1.2 1 0 0 1 1 1 1 Nitronate monooxygenase His_biosynth PF00977.21 BAM39885.1 - 0.0069 15.9 0.0 0.11 11.9 0.0 2.2 2 0 0 2 2 2 1 Histidine biosynthesis protein ThiG PF05690.14 BAM39885.1 - 0.022 14.1 0.0 0.035 13.4 0.0 1.3 1 0 0 1 1 1 0 Thiazole biosynthesis protein ThiG PcrB PF01884.17 BAM39885.1 - 0.025 14.0 0.3 1.7 8.0 0.1 2.2 2 0 0 2 2 2 0 PcrB family FMN_dh PF01070.18 BAM39885.1 - 0.17 10.8 0.1 0.3 10.1 0.1 1.4 1 1 0 1 1 1 0 FMN-dependent dehydrogenase AAA PF00004.29 BAM39886.1 - 2e-51 173.9 0.0 1.6e-35 122.4 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 BAM39886.1 - 2.9e-10 40.8 0.0 0.0008 19.8 0.0 2.9 3 0 0 3 3 2 2 AAA ATPase domain AAA_5 PF07728.14 BAM39886.1 - 3.9e-10 39.9 0.0 9.5e-06 25.7 0.0 2.9 2 1 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 BAM39886.1 - 2e-09 37.8 4.0 0.016 15.5 0.6 4.4 2 2 1 3 3 3 3 AAA domain AAA_lid_3 PF17862.1 BAM39886.1 - 2.8e-09 36.6 0.0 6e-09 35.6 0.0 1.6 1 0 0 1 1 1 1 AAA+ lid domain CDC48_N PF02359.18 BAM39886.1 - 5.5e-09 36.1 0.0 1.4e-08 34.7 0.0 1.6 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain TIP49 PF06068.13 BAM39886.1 - 6.1e-08 32.2 0.0 0.0065 15.7 0.0 2.4 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_33 PF13671.6 BAM39886.1 - 2.6e-07 30.9 0.0 0.0041 17.3 0.0 2.5 2 0 0 2 2 2 2 AAA domain ATPase_2 PF01637.18 BAM39886.1 - 7.1e-07 29.4 0.1 0.1 12.5 0.0 4.2 2 2 2 4 4 4 1 ATPase domain predominantly from Archaea TsaE PF02367.17 BAM39886.1 - 1.7e-06 28.0 0.0 0.086 12.8 0.0 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 BAM39886.1 - 2.2e-06 28.2 0.0 0.0082 16.7 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_2 PF07724.14 BAM39886.1 - 2.5e-06 27.7 0.0 5.7e-05 23.3 0.0 2.4 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) RuvB_N PF05496.12 BAM39886.1 - 2.8e-06 27.2 0.2 0.0051 16.6 0.0 3.0 3 0 0 3 3 2 2 Holliday junction DNA helicase RuvB P-loop domain NACHT PF05729.12 BAM39886.1 - 4.2e-06 26.8 0.3 0.053 13.4 0.0 3.0 3 1 0 3 3 2 2 NACHT domain AAA_14 PF13173.6 BAM39886.1 - 9.5e-06 25.7 0.0 0.24 11.5 0.0 2.6 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 BAM39886.1 - 2.4e-05 24.6 0.0 0.039 14.4 0.0 2.7 2 0 0 2 2 2 1 RNA helicase Mg_chelatase PF01078.21 BAM39886.1 - 3.1e-05 23.5 0.1 0.007 15.8 0.0 2.4 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_7 PF12775.7 BAM39886.1 - 3.4e-05 23.4 0.0 0.0098 15.4 0.0 2.6 2 0 0 2 2 2 1 P-loop containing dynein motor region Sigma54_activat PF00158.26 BAM39886.1 - 4.8e-05 23.1 0.0 0.25 11.0 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain NB-ARC PF00931.22 BAM39886.1 - 0.00016 21.0 0.0 0.61 9.2 0.0 2.8 3 0 0 3 3 3 2 NB-ARC domain AAA_28 PF13521.6 BAM39886.1 - 0.00038 20.7 0.0 0.38 11.0 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 BAM39886.1 - 0.0013 18.3 0.3 0.49 9.9 0.0 2.7 3 0 0 3 3 2 1 AAA domain TniB PF05621.11 BAM39886.1 - 0.002 17.6 0.0 4.9 6.5 0.0 3.7 2 1 1 3 3 3 0 Bacterial TniB protein AAA_24 PF13479.6 BAM39886.1 - 0.0026 17.5 0.0 0.035 13.8 0.0 2.5 2 1 0 2 2 2 1 AAA domain Rad17 PF03215.15 BAM39886.1 - 0.0031 17.4 0.2 0.19 11.6 0.0 3.0 2 1 1 3 3 3 1 Rad17 P-loop domain DUF815 PF05673.13 BAM39886.1 - 0.0037 16.5 0.2 0.76 8.9 0.0 2.8 3 0 0 3 3 3 1 Protein of unknown function (DUF815) DAP3 PF10236.9 BAM39886.1 - 0.004 16.4 0.1 0.15 11.2 0.0 2.3 2 0 0 2 2 2 1 Mitochondrial ribosomal death-associated protein 3 ATPase PF06745.13 BAM39886.1 - 0.0043 16.4 0.1 0.058 12.7 0.0 2.3 2 0 0 2 2 2 1 KaiC Parvo_NS1 PF01057.17 BAM39886.1 - 0.0045 16.1 0.0 0.072 12.2 0.0 2.1 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 AFG1_ATPase PF03969.16 BAM39886.1 - 0.0062 15.5 0.0 2.6 6.8 0.0 2.2 2 0 0 2 2 2 1 AFG1-like ATPase IstB_IS21 PF01695.17 BAM39886.1 - 0.0064 16.2 0.0 0.7 9.6 0.0 2.6 2 0 0 2 2 2 1 IstB-like ATP binding protein Zeta_toxin PF06414.12 BAM39886.1 - 0.017 14.4 0.1 1 8.6 0.0 2.4 2 0 0 2 2 2 0 Zeta toxin CDC48_2 PF02933.17 BAM39886.1 - 0.018 14.8 0.6 0.087 12.6 0.1 2.3 2 0 0 2 2 2 0 Cell division protein 48 (CDC48), domain 2 AAA_17 PF13207.6 BAM39886.1 - 0.02 15.3 0.0 3.6 8.0 0.0 2.6 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 BAM39886.1 - 0.032 14.8 0.1 7.3 7.1 0.0 2.6 2 0 0 2 2 2 0 ABC transporter DUF2075 PF09848.9 BAM39886.1 - 0.056 12.7 0.0 0.31 10.2 0.0 2.0 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) AAA_3 PF07726.11 BAM39886.1 - 0.079 12.8 0.0 1.1 9.2 0.0 2.3 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) Torsin PF06309.11 BAM39886.1 - 0.093 12.8 0.0 25 5.0 0.0 2.5 2 0 0 2 2 2 0 Torsin AAA_11 PF13086.6 BAM39886.1 - 0.097 12.4 0.1 0.32 10.7 0.1 1.9 2 1 0 2 2 1 0 AAA domain AAA_30 PF13604.6 BAM39886.1 - 0.098 12.4 0.1 0.89 9.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain DNA_pol3_delta2 PF13177.6 BAM39886.1 - 0.1 12.4 0.0 0.55 10.0 0.0 2.2 2 1 1 3 3 2 0 DNA polymerase III, delta subunit SKI PF01202.22 BAM39886.1 - 0.11 12.6 0.0 11 6.1 0.0 2.6 2 0 0 2 2 2 0 Shikimate kinase AAA_19 PF13245.6 BAM39886.1 - 0.13 12.6 0.0 0.76 10.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain Glyco_transf_90 PF05686.12 BAM39886.1 - 0.16 10.8 0.0 0.25 10.2 0.0 1.2 1 0 0 1 1 1 0 Glycosyl transferase family 90 T2SSK PF03934.13 BAM39887.1 - 0.076 12.4 0.1 0.21 11.0 0.0 1.7 2 0 0 2 2 2 0 Type II secretion system (T2SS), protein K CRM1_C PF08767.11 BAM39888.1 - 7.4e-92 307.9 2.7 2.5e-91 306.2 0.1 2.8 3 0 0 3 3 3 1 CRM1 C terminal Xpo1 PF08389.12 BAM39888.1 - 1.4e-33 116.1 1.7 1.4e-33 116.1 1.7 4.3 5 0 0 5 5 5 1 Exportin 1-like protein CRM1_repeat_3 PF18787.1 BAM39888.1 - 3.6e-20 71.8 2.6 5.3e-19 68.1 0.1 3.7 3 0 0 3 3 3 1 CRM1 / Exportin repeat 3 CRM1_repeat_2 PF18784.1 BAM39888.1 - 1.1e-15 57.0 3.9 1.1e-15 57.0 3.9 2.7 2 0 0 2 2 2 1 CRM1 / Exportin repeat 2 IBN_N PF03810.19 BAM39888.1 - 4.7e-13 48.9 0.6 1.6e-12 47.1 0.6 2.0 1 0 0 1 1 1 1 Importin-beta N-terminal domain CRM1_repeat PF18777.1 BAM39888.1 - 8.8e-06 25.1 0.7 2.9e-05 23.5 0.7 2.0 1 0 0 1 1 1 1 Chromosome region maintenance or exportin repeat V-ATPase_H_C PF11698.8 BAM39888.1 - 0.39 10.8 3.0 46 4.2 0.1 4.1 3 0 0 3 3 3 0 V-ATPase subunit H Pkinase PF00069.25 BAM39890.1 - 3.6e-47 161.0 0.0 3.6e-47 161.0 0.0 2.3 3 0 0 3 3 3 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM39890.1 - 4.8e-22 78.5 0.0 2.5e-21 76.1 0.0 2.2 1 1 1 2 2 2 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 BAM39890.1 - 0.023 13.5 0.0 0.023 13.5 0.0 1.8 2 1 0 2 2 2 0 Fungal protein kinase TYW3 PF02676.14 BAM39891.1 - 1.1e-42 145.8 0.1 2.1e-42 144.9 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase TYW3 Met_10 PF02475.16 BAM39891.1 - 1.4e-25 90.2 0.2 4.9e-25 88.5 0.2 1.8 1 1 0 1 1 1 1 Met-10+ like-protein MTS PF05175.14 BAM39891.1 - 3.9e-06 26.5 0.2 1e-05 25.1 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase small domain Methyltransf_25 PF13649.6 BAM39891.1 - 8.3e-05 23.2 0.0 0.0002 22.0 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAM39891.1 - 0.00051 19.9 0.0 0.0012 18.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_15 PF09445.10 BAM39891.1 - 0.00056 19.5 0.1 0.0015 18.1 0.1 1.8 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase tRNA_U5-meth_tr PF05958.11 BAM39891.1 - 0.0075 15.3 0.1 0.018 14.1 0.1 1.5 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase Telomerase_RBD PF12009.8 BAM39891.1 - 0.041 14.0 0.1 0.11 12.6 0.1 1.7 1 0 0 1 1 1 0 Telomerase ribonucleoprotein complex - RNA binding domain PrmA PF06325.13 BAM39891.1 - 0.12 11.8 0.5 0.21 10.9 0.0 1.6 2 0 0 2 2 2 0 Ribosomal protein L11 methyltransferase (PrmA) PHF5 PF03660.14 BAM39892.1 - 3.7e-49 165.2 14.6 4.5e-49 165.0 14.6 1.0 1 0 0 1 1 1 1 PHF5-like protein PolC_DP2 PF03833.13 BAM39892.1 - 3.7 5.3 8.7 4 5.2 8.7 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 GTP_EFTU PF00009.27 BAM39893.1 - 5e-32 111.0 0.0 5e-32 111.0 0.0 2.7 2 2 0 2 2 2 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 BAM39893.1 - 4e-17 62.3 0.0 1.5e-16 60.4 0.0 2.0 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D4 PF14578.6 BAM39893.1 - 1.6e-12 47.2 0.0 5.1e-12 45.5 0.0 2.0 1 0 0 1 1 1 1 Elongation factor Tu domain 4 GTP_EFTU_D2 PF03144.25 BAM39893.1 - 1.4e-08 35.0 3.9 3e-07 30.7 0.4 3.4 3 0 0 3 3 3 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 BAM39893.1 - 1.4e-06 28.4 0.0 2e-05 24.6 0.0 2.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase Roc PF08477.13 BAM39893.1 - 0.0002 21.6 0.0 0.00074 19.7 0.0 2.0 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase ATP_bind_1 PF03029.17 BAM39893.1 - 0.016 15.0 0.0 0.016 15.0 0.0 2.2 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein OKR_DC_1_N PF03709.15 BAM39893.1 - 0.094 13.0 0.1 1.8 8.9 0.0 2.4 2 0 0 2 2 2 0 Orn/Lys/Arg decarboxylase, N-terminal domain AAA_16 PF13191.6 BAM39893.1 - 0.22 11.9 3.6 12 6.2 0.0 2.9 3 0 0 3 3 3 0 AAA ATPase domain AAA_22 PF13401.6 BAM39893.1 - 0.38 11.0 4.4 2.3 8.5 0.0 3.5 3 0 0 3 3 3 0 AAA domain zf-RING_2 PF13639.6 BAM39894.1 - 1.4e-08 34.9 5.7 1.4e-08 34.9 5.7 1.9 2 0 0 2 2 1 1 Ring finger domain zf-rbx1 PF12678.7 BAM39894.1 - 4.5e-07 30.0 3.4 1.1e-06 28.9 3.4 1.7 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 BAM39894.1 - 9.2e-05 22.2 4.4 0.00026 20.8 4.4 1.8 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 BAM39894.1 - 0.0002 21.2 3.4 0.00041 20.2 3.4 1.5 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4 PF00097.25 BAM39894.1 - 0.00029 20.7 4.1 0.00069 19.4 4.1 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-ANAPC11 PF12861.7 BAM39894.1 - 0.00051 20.0 2.2 0.00081 19.4 1.5 1.6 2 0 0 2 2 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_5 PF14634.6 BAM39894.1 - 0.00076 19.4 4.8 0.0016 18.3 3.7 2.2 1 1 1 2 2 2 1 zinc-RING finger domain zf-C3HC4_2 PF13923.6 BAM39894.1 - 0.0028 17.5 8.4 0.0079 16.0 7.9 2.1 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 BAM39894.1 - 0.011 15.4 2.1 0.011 15.4 2.1 3.4 3 1 0 3 3 3 0 RING-like zinc finger Zn_ribbon_17 PF17120.5 BAM39894.1 - 0.022 14.3 3.7 0.056 13.1 3.7 1.7 1 1 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING_UBOX PF13445.6 BAM39894.1 - 0.029 14.4 3.2 0.033 14.2 1.2 2.2 1 1 1 2 2 2 0 RING-type zinc-finger RINGv PF12906.7 BAM39894.1 - 0.051 13.7 4.4 0.14 12.3 4.4 1.8 1 1 0 1 1 1 0 RING-variant domain Syntaxin_2 PF14523.6 BAM39894.1 - 0.061 13.7 4.7 3.9 7.9 1.6 2.5 2 0 0 2 2 2 0 Syntaxin-like protein HTH_ABP1_N PF18107.1 BAM39894.1 - 0.1 12.3 0.0 0.34 10.6 0.0 1.8 1 0 0 1 1 1 0 Fission yeast centromere protein N-terminal domain zf-RING-like PF08746.11 BAM39894.1 - 0.81 10.1 3.7 1.9 8.9 3.7 1.6 1 0 0 1 1 1 0 RING-like domain zf-RING_4 PF14570.6 BAM39894.1 - 1.9 8.4 5.0 0.19 11.6 0.4 1.8 2 0 0 2 2 1 0 RING/Ubox like zinc-binding domain KMP11 PF03037.16 BAM39894.1 - 2.5 8.9 7.7 0.35 11.7 1.1 2.4 2 1 0 2 2 2 0 Kinetoplastid membrane protein 11 FANCL_C PF11793.8 BAM39894.1 - 4.4 7.6 6.2 25 5.2 6.2 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain PRA1 PF03208.19 BAM39894.1 - 6.4 6.4 10.9 1.4 8.5 4.7 2.1 2 0 0 2 2 2 0 PRA1 family protein EXS PF03124.14 BAM39895.1 - 5.5e-68 229.7 27.7 5.5e-68 229.7 27.7 1.4 2 0 0 2 2 2 1 EXS family SPX PF03105.19 BAM39895.1 - 2.6e-08 34.2 21.0 4.4e-07 30.2 21.0 2.5 1 1 0 1 1 1 1 SPX domain FAM153 PF15722.5 BAM39895.1 - 0.13 12.6 0.1 0.33 11.3 0.1 1.6 1 0 0 1 1 1 0 FAM153 family WD40 PF00400.32 BAM39896.1 - 0.0049 17.7 17.9 0.52 11.3 0.1 6.0 6 2 0 6 6 6 2 WD domain, G-beta repeat GYF PF02213.16 BAM39899.1 - 2.5e-12 46.3 5.2 6.6e-12 44.9 5.2 1.8 1 0 0 1 1 1 1 GYF domain ribosomal_L24 PF17136.4 BAM39900.1 - 4.1e-10 39.9 0.3 1e-09 38.6 0.3 1.7 1 0 0 1 1 1 1 Ribosomal proteins 50S L24/mitochondrial 39S L24 KOW PF00467.29 BAM39900.1 - 4.7e-07 29.5 1.7 4.7e-07 29.5 1.7 1.7 2 0 0 2 2 2 1 KOW motif MazE_antitoxin PF04014.18 BAM39900.1 - 0.047 13.6 1.1 0.2 11.6 0.3 2.2 2 0 0 2 2 2 0 Antidote-toxin recognition MazE, bacterial antitoxin GTP_EFTU_D2 PF03144.25 BAM39900.1 - 1.7 9.1 3.9 7.1 7.1 0.2 3.0 3 1 0 3 3 3 0 Elongation factor Tu domain 2 Cyclin_N PF00134.23 BAM39902.1 - 0.00015 21.5 0.4 0.00033 20.4 0.4 1.6 1 0 0 1 1 1 1 Cyclin, N-terminal domain GIT_SHD PF08518.11 BAM39902.1 - 0.34 10.6 0.1 0.34 10.6 0.1 2.4 3 0 0 3 3 3 0 Spa2 homology domain (SHD) of GIT Pkinase PF00069.25 BAM39903.1 - 1.1e-58 198.7 0.0 1.2e-58 198.5 0.0 1.0 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM39903.1 - 6.7e-37 127.2 0.0 8.5e-37 126.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 BAM39903.1 - 7.8e-05 22.1 0.0 0.00019 20.9 0.0 1.6 1 1 0 1 1 1 1 Kinase-like Haspin_kinase PF12330.8 BAM39903.1 - 0.00052 19.1 0.6 0.00073 18.6 0.6 1.1 1 0 0 1 1 1 1 Haspin like kinase domain Kdo PF06293.14 BAM39903.1 - 0.029 13.7 0.3 0.047 13.0 0.3 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family YukC PF10140.9 BAM39903.1 - 0.035 12.9 0.1 0.049 12.5 0.1 1.1 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein YukC Seadorna_VP7 PF07387.11 BAM39903.1 - 0.057 12.5 0.1 0.1 11.6 0.1 1.4 1 0 0 1 1 1 0 Seadornavirus VP7 Choline_kinase PF01633.20 BAM39903.1 - 0.07 12.7 0.4 0.13 11.9 0.4 1.5 1 1 0 1 1 1 0 Choline/ethanolamine kinase Glutaredoxin PF00462.24 BAM39907.1 - 2.3e-17 63.0 0.0 6.6e-17 61.5 0.0 1.8 2 0 0 2 2 2 1 Glutaredoxin POTRA PF07244.15 BAM39907.1 - 0.028 15.0 0.2 0.56 10.8 0.0 2.3 2 0 0 2 2 2 0 Surface antigen variable number repeat SH3BGR PF04908.15 BAM39907.1 - 0.042 14.0 0.0 0.22 11.7 0.0 2.1 2 1 0 2 2 2 0 SH3-binding, glutamic acid-rich protein RTP PF02334.16 BAM39907.1 - 0.085 13.5 0.0 0.31 11.7 0.0 1.8 2 0 0 2 2 2 0 Replication terminator protein Methyltransf_23 PF13489.6 BAM39908.1 - 8.9e-25 87.4 0.0 1.3e-24 86.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 BAM39908.1 - 2.2e-16 60.3 0.0 4.3e-16 59.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 BAM39908.1 - 2.5e-16 60.1 0.0 1e-15 58.2 0.0 2.1 2 1 0 2 2 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 BAM39908.1 - 7.3e-15 55.5 0.1 1.4e-14 54.6 0.1 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAM39908.1 - 1.4e-13 50.9 0.1 3.9e-13 49.5 0.1 1.8 1 1 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 BAM39908.1 - 7.3e-10 38.6 0.6 3.7e-09 36.3 0.6 1.9 1 1 0 1 1 1 1 Mycolic acid cyclopropane synthetase CheR PF01739.18 BAM39908.1 - 1.9e-05 24.2 0.4 0.00023 20.7 0.3 2.4 1 1 1 2 2 2 1 CheR methyltransferase, SAM binding domain PrmA PF06325.13 BAM39908.1 - 4.4e-05 23.0 0.0 9.2e-05 22.0 0.0 1.4 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_32 PF13679.6 BAM39908.1 - 5.8e-05 23.1 0.0 8.6e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 BAM39908.1 - 6e-05 22.5 0.3 0.0014 18.1 0.3 2.2 1 1 0 1 1 1 1 Tellurite resistance protein TehB RrnaAD PF00398.20 BAM39908.1 - 0.00016 20.9 0.0 0.00023 20.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase NodS PF05401.11 BAM39908.1 - 0.00028 20.6 0.0 0.0041 16.8 0.0 2.1 1 1 0 1 1 1 1 Nodulation protein S (NodS) Ubie_methyltran PF01209.18 BAM39908.1 - 0.00055 19.3 0.1 0.0012 18.2 0.1 1.5 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Spermine_synth PF01564.17 BAM39908.1 - 0.0017 17.8 0.1 0.0029 17.0 0.1 1.3 1 0 0 1 1 1 1 Spermine/spermidine synthase domain PCMT PF01135.19 BAM39908.1 - 0.0032 17.3 0.0 0.0064 16.3 0.0 1.6 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_9 PF08003.11 BAM39908.1 - 0.0045 16.0 0.1 0.0099 14.8 0.1 1.5 1 1 1 2 2 2 1 Protein of unknown function (DUF1698) Methyltransf_PK PF05891.12 BAM39908.1 - 0.0047 16.5 0.0 0.0081 15.7 0.0 1.3 1 0 0 1 1 1 1 AdoMet dependent proline di-methyltransferase Methyltransf_15 PF09445.10 BAM39908.1 - 0.0066 16.0 0.3 0.018 14.6 0.3 1.9 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase MTS PF05175.14 BAM39908.1 - 0.0085 15.7 0.2 0.037 13.6 0.2 1.9 1 1 0 1 1 1 1 Methyltransferase small domain TPMT PF05724.11 BAM39908.1 - 0.0093 15.6 0.0 0.014 15.1 0.0 1.2 1 0 0 1 1 1 1 Thiopurine S-methyltransferase (TPMT) Methyltransf_4 PF02390.17 BAM39908.1 - 0.022 14.3 0.0 2 7.9 0.0 2.3 2 0 0 2 2 2 0 Putative methyltransferase GidB PF02527.15 BAM39908.1 - 0.063 12.6 0.1 0.14 11.5 0.1 1.5 1 1 0 1 1 1 0 rRNA small subunit methyltransferase G MetW PF07021.12 BAM39908.1 - 0.14 11.8 0.1 0.28 10.8 0.1 1.5 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW UDPG_MGDP_dh_N PF03721.14 BAM39908.1 - 0.2 11.2 0.0 0.33 10.5 0.0 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain YdjO PF14169.6 BAM39909.1 - 0.42 10.4 3.0 0.24 11.2 0.9 1.7 2 0 0 2 2 2 0 Cold-inducible protein YdjO Topoisom_I PF01028.20 BAM39910.1 - 1.6e-98 328.6 14.5 5.4e-98 326.9 14.5 2.0 1 0 0 1 1 1 1 Eukaryotic DNA topoisomerase I, catalytic core Topoisom_I_N PF02919.15 BAM39910.1 - 1.3e-72 243.8 7.4 1.3e-72 243.8 7.4 4.4 3 1 1 4 4 4 1 Eukaryotic DNA topoisomerase I, DNA binding fragment Topo_C_assoc PF14370.6 BAM39910.1 - 1e-32 111.8 2.4 5e-32 109.6 2.4 2.3 1 0 0 1 1 1 1 C-terminal topoisomerase domain Bromodomain PF00439.25 BAM39911.1 - 6e-15 55.1 0.1 6e-15 55.1 0.1 2.3 2 0 0 2 2 2 1 Bromodomain PIP5K PF01504.18 BAM39912.1 - 3.2e-73 246.3 5.1 1.1e-72 244.6 0.0 3.1 3 1 0 3 3 3 1 Phosphatidylinositol-4-phosphate 5-Kinase EF-hand_1 PF00036.32 BAM39912.1 - 0.00044 19.6 0.8 0.0012 18.2 0.2 2.2 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 BAM39912.1 - 0.0041 16.9 0.0 0.013 15.3 0.0 1.9 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_6 PF13405.6 BAM39912.1 - 0.039 13.9 0.1 0.21 11.6 0.1 2.3 2 0 0 2 2 2 0 EF-hand domain EF-hand_7 PF13499.6 BAM39912.1 - 0.085 13.3 0.1 0.87 10.1 0.1 2.6 3 0 0 3 3 3 0 EF-hand domain pair JAB PF01398.21 BAM39914.1 - 8.5e-32 109.6 0.0 1.7e-31 108.6 0.0 1.5 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease Prok-JAB PF14464.6 BAM39914.1 - 1.4e-09 37.7 0.0 2.3e-09 37.0 0.0 1.4 1 0 0 1 1 1 1 Prokaryotic homologs of the JAB domain MitMem_reg PF13012.6 BAM39914.1 - 6.9e-09 36.1 0.2 1.4e-08 35.1 0.2 1.5 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function Complex1_LYR_2 PF13233.6 BAM39914.1 - 0.082 13.7 0.1 0.15 12.8 0.1 1.5 1 0 0 1 1 1 0 Complex1_LYR-like TF_Zn_Ribbon PF08271.12 BAM39916.1 - 3.1e-09 36.2 0.4 5.5e-09 35.4 0.4 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding TFIIB PF00382.19 BAM39916.1 - 4.9e-09 36.1 0.2 4.9e-05 23.3 0.1 2.4 2 0 0 2 2 2 2 Transcription factor TFIIB repeat CYTL1 PF15153.6 BAM39916.1 - 0.029 14.3 0.2 0.073 13.0 0.2 1.7 1 0 0 1 1 1 0 Cytokine-like protein 1 RasGEF PF00617.19 BAM39916.1 - 0.18 12.0 3.1 0.29 11.3 2.6 1.6 1 1 0 1 1 1 0 RasGEF domain Ribosomal_S27e PF01667.17 BAM39916.1 - 0.18 11.5 1.2 0.41 10.4 1.2 1.5 1 0 0 1 1 1 0 Ribosomal protein S27 Syntaxin_2 PF14523.6 BAM39916.1 - 0.29 11.5 3.0 0.45 10.9 2.2 1.7 2 0 0 2 2 2 0 Syntaxin-like protein AAA_18 PF13238.6 BAM39917.1 - 9.4e-24 84.4 0.8 1.2e-23 84.1 0.2 1.4 2 0 0 2 2 1 1 AAA domain AAA_17 PF13207.6 BAM39917.1 - 1.2e-08 35.4 0.6 2.7e-07 31.1 0.4 2.6 1 1 1 2 2 2 1 AAA domain AAA PF00004.29 BAM39917.1 - 2.2e-05 24.9 0.2 5.5e-05 23.6 0.2 1.8 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 BAM39917.1 - 0.00011 22.6 0.0 0.00014 22.3 0.0 1.3 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 BAM39917.1 - 0.00015 22.1 0.0 0.00024 21.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 BAM39917.1 - 0.00016 21.5 0.0 0.00029 20.7 0.0 1.5 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase TniB PF05621.11 BAM39917.1 - 0.00022 20.7 0.0 0.00028 20.4 0.0 1.2 1 0 0 1 1 1 1 Bacterial TniB protein G-alpha PF00503.20 BAM39917.1 - 0.00036 19.8 0.7 0.025 13.7 0.0 2.0 2 0 0 2 2 2 1 G-protein alpha subunit AAA_33 PF13671.6 BAM39917.1 - 0.00063 19.9 0.3 0.0075 16.4 0.1 2.1 1 1 0 2 2 2 1 AAA domain NTPase_1 PF03266.15 BAM39917.1 - 0.00086 19.3 0.2 0.0017 18.3 0.2 1.5 1 0 0 1 1 1 1 NTPase NACHT PF05729.12 BAM39917.1 - 0.00091 19.2 0.0 0.0016 18.4 0.0 1.4 1 0 0 1 1 1 1 NACHT domain GTP_EFTU PF00009.27 BAM39917.1 - 0.0016 18.0 0.0 0.0028 17.2 0.0 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain AAA_5 PF07728.14 BAM39917.1 - 0.0017 18.4 0.5 0.0056 16.7 0.5 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) NB-ARC PF00931.22 BAM39917.1 - 0.0019 17.4 0.0 0.006 15.8 0.0 1.6 1 1 0 1 1 1 1 NB-ARC domain PduV-EutP PF10662.9 BAM39917.1 - 0.0029 17.4 0.0 0.0059 16.3 0.0 1.5 1 0 0 1 1 1 1 Ethanolamine utilisation - propanediol utilisation Mg_chelatase PF01078.21 BAM39917.1 - 0.0032 16.9 0.0 0.0075 15.7 0.0 1.5 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_19 PF13245.6 BAM39917.1 - 0.0043 17.4 0.0 0.0082 16.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 BAM39917.1 - 0.0055 16.5 0.4 0.0087 15.8 0.4 1.5 1 1 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 BAM39917.1 - 0.0072 16.7 0.0 0.012 16.0 0.0 1.5 1 0 0 1 1 1 1 RNA helicase AAA_28 PF13521.6 BAM39917.1 - 0.0087 16.3 0.2 0.026 14.8 0.0 1.8 2 0 0 2 2 2 1 AAA domain DLIC PF05783.11 BAM39917.1 - 0.0094 14.8 0.1 0.01 14.7 0.1 1.1 1 0 0 1 1 1 1 Dynein light intermediate chain (DLIC) AAA_14 PF13173.6 BAM39917.1 - 0.012 15.7 0.2 0.022 14.8 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 BAM39917.1 - 0.017 14.7 0.0 0.024 14.2 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region RuvB_N PF05496.12 BAM39917.1 - 0.018 14.8 0.0 0.029 14.1 0.0 1.4 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain ADK PF00406.22 BAM39917.1 - 0.019 15.1 1.2 0.096 12.8 1.2 2.4 1 1 0 1 1 1 0 Adenylate kinase Roc PF08477.13 BAM39917.1 - 0.024 14.9 0.1 0.18 12.0 0.0 2.1 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1 PF01926.23 BAM39917.1 - 0.029 14.5 0.1 0.034 14.2 0.1 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase ABC_tran PF00005.27 BAM39917.1 - 0.03 14.8 0.1 0.046 14.2 0.0 1.6 1 1 0 1 1 1 0 ABC transporter Zeta_toxin PF06414.12 BAM39917.1 - 0.033 13.5 0.0 0.11 11.8 0.0 1.8 2 0 0 2 2 2 0 Zeta toxin ATP_bind_1 PF03029.17 BAM39917.1 - 0.033 14.0 0.6 0.057 13.2 0.1 1.7 2 1 0 2 2 2 0 Conserved hypothetical ATP binding protein ATPase PF06745.13 BAM39917.1 - 0.053 12.9 0.0 0.11 11.8 0.0 1.5 1 0 0 1 1 1 0 KaiC TsaE PF02367.17 BAM39917.1 - 0.071 13.1 0.6 0.34 10.9 0.1 2.2 1 1 1 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE FtsK_SpoIIIE PF01580.18 BAM39917.1 - 0.11 11.9 0.0 0.17 11.2 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family Methyltr_RsmB-F PF01189.17 BAM39918.1 - 1.1e-28 100.2 0.0 2.1e-28 99.4 0.0 1.4 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_31 PF13847.6 BAM39918.1 - 7.5e-09 35.6 0.0 1.4e-08 34.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 BAM39918.1 - 3.3e-07 29.9 0.0 5.2e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_25 PF13649.6 BAM39918.1 - 1.9e-06 28.5 0.0 4.1e-06 27.4 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 BAM39918.1 - 3.8e-05 23.3 0.0 0.00048 19.7 0.0 2.1 1 1 0 1 1 1 1 Methyltransferase small domain Methyltr_RsmF_N PF17125.5 BAM39918.1 - 0.00036 21.0 0.0 0.11 13.0 0.0 2.7 1 1 0 1 1 1 1 N-terminal domain of 16S rRNA methyltransferase RsmF FtsJ PF01728.19 BAM39918.1 - 0.0047 17.1 0.0 0.008 16.3 0.0 1.4 1 0 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_12 PF08242.12 BAM39918.1 - 0.012 16.4 0.0 0.023 15.4 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain GCD14 PF08704.10 BAM39918.1 - 0.17 11.6 0.0 0.27 10.9 0.0 1.2 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit RNA_POL_M_15KD PF02150.16 BAM39920.1 - 1.9e-07 30.8 2.4 1.9e-07 30.8 2.4 2.3 2 0 0 2 2 2 1 RNA polymerases M/15 Kd subunit TFIIS_C PF01096.18 BAM39920.1 - 1.1e-06 28.4 0.3 1.1e-06 28.4 0.3 3.0 2 1 0 2 2 2 1 Transcription factor S-II (TFIIS) DZR PF12773.7 BAM39920.1 - 0.024 14.6 4.5 0.14 12.2 2.6 2.3 2 0 0 2 2 2 0 Double zinc ribbon Nudix_N_2 PF14803.6 BAM39920.1 - 0.072 13.0 1.6 0.072 13.0 1.6 2.9 3 0 0 3 3 3 0 Nudix N-terminal Ogr_Delta PF04606.12 BAM39920.1 - 0.13 12.3 4.8 0.49 10.4 0.3 2.7 2 1 0 2 2 2 0 Ogr/Delta-like zinc finger zf-ACC PF17848.1 BAM39920.1 - 0.2 11.8 0.4 0.2 11.8 0.4 3.5 5 0 0 5 5 4 0 Acetyl-coA carboxylase zinc finger domain Zn_Tnp_IS1595 PF12760.7 BAM39920.1 - 0.2 11.6 6.2 2.6 8.1 0.2 2.6 2 0 0 2 2 2 0 Transposase zinc-ribbon domain IBR PF01485.21 BAM39920.1 - 0.21 11.9 9.0 24 5.2 6.0 3.1 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain DUF4379 PF14311.6 BAM39920.1 - 0.22 11.9 2.6 1.5 9.3 0.0 2.5 2 0 0 2 2 2 0 Probable Zinc-ribbon domain Elf1 PF05129.13 BAM39920.1 - 0.39 10.8 5.8 4.2 7.5 0.1 2.3 2 0 0 2 2 2 0 Transcription elongation factor Elf1 like Ribosomal_S27e PF01667.17 BAM39920.1 - 0.67 9.7 3.7 1.8 8.3 0.1 2.7 2 1 0 2 2 2 0 Ribosomal protein S27 zinc_ribbon_10 PF10058.9 BAM39920.1 - 0.82 9.4 7.9 2.8 7.7 0.0 3.0 3 1 0 3 3 3 0 Predicted integral membrane zinc-ribbon metal-binding protein GFA PF04828.14 BAM39920.1 - 0.85 10.0 8.7 1.6 9.1 0.3 3.4 1 1 2 4 4 4 0 Glutathione-dependent formaldehyde-activating enzyme HscB_4_cys PF18256.1 BAM39920.1 - 1.7 8.6 6.6 57 3.6 0.2 3.6 3 0 0 3 3 3 0 Co-chaperone HscB tetracysteine metal binding motif zinc_ribbon_9 PF14369.6 BAM39920.1 - 3.3 8.0 7.7 22 5.4 1.3 3.0 3 0 0 3 3 3 0 zinc-ribbon zf-H2C2_5 PF13909.6 BAM39920.1 - 5.5 6.8 8.4 0.93 9.3 1.9 2.6 2 0 0 2 2 2 0 C2H2-type zinc-finger domain PHD PF00628.29 BAM39920.1 - 9.5 6.2 9.6 7.5 6.5 2.9 2.9 2 2 0 2 2 2 0 PHD-finger Zn_ribbon_recom PF13408.6 BAM39920.1 - 10 6.8 8.8 0.91 10.1 1.8 2.4 2 1 0 2 2 2 0 Recombinase zinc beta ribbon domain Evr1_Alr PF04777.13 BAM39921.1 - 8.3e-19 67.9 0.0 9.8e-19 67.7 0.0 1.1 1 0 0 1 1 1 1 Erv1 / Alr family 4HB_MCP_1 PF12729.7 BAM39922.1 - 0.067 12.7 1.6 0.096 12.2 1.6 1.3 1 0 0 1 1 1 0 Four helix bundle sensory module for signal transduction DUF3744 PF12558.8 BAM39922.1 - 0.074 13.8 0.9 5.6 7.8 0.1 2.7 2 1 0 2 2 2 0 ATP-binding cassette cobalt transporter LXG PF04740.12 BAM39922.1 - 0.081 12.6 2.7 0.12 12.0 1.5 1.7 1 1 1 2 2 2 0 LXG domain of WXG superfamily TMF_DNA_bd PF12329.8 BAM39922.1 - 0.57 10.2 3.0 2.7 8.1 0.3 2.3 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding DUF1690 PF07956.11 BAM39923.1 - 0.0012 19.2 4.5 0.0017 18.8 2.4 2.1 1 1 1 2 2 2 1 Protein of Unknown function (DUF1690) Enkurin PF13864.6 BAM39923.1 - 0.0088 16.5 2.6 0.029 14.8 2.6 2.0 1 1 0 1 1 1 1 Calmodulin-binding COG5 PF10392.9 BAM39923.1 - 0.038 14.2 4.3 0.77 9.9 0.7 2.8 2 1 0 2 2 2 0 Golgi transport complex subunit 5 DUF3958 PF13125.6 BAM39923.1 - 0.044 14.0 2.5 0.099 12.9 2.5 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF3958) DNA_repr_REX1B PF14966.6 BAM39923.1 - 0.053 14.2 2.5 0.22 12.2 0.8 2.6 2 1 1 3 3 3 0 DNA repair REX1-B DUF745 PF05335.13 BAM39923.1 - 0.084 12.6 0.1 0.31 10.7 0.0 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF745) Prefoldin_2 PF01920.20 BAM39923.1 - 0.21 11.6 12.2 0.11 12.5 7.6 2.4 2 1 1 3 3 3 0 Prefoldin subunit Med9 PF07544.13 BAM39923.1 - 0.58 10.3 4.9 13 6.0 0.3 2.6 2 1 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 FAINT PF04385.15 BAM39924.1 - 2.9e-12 46.5 14.4 4e-09 36.4 0.1 4.3 4 0 0 4 4 4 3 Domain of unknown function, DUF529 FAINT PF04385.15 BAM39925.1 - 9.9e-12 44.8 5.5 5.7e-06 26.3 1.2 2.9 3 0 0 3 3 3 2 Domain of unknown function, DUF529 DUF3437 PF11919.8 BAM39925.1 - 0.055 13.4 0.7 0.13 12.2 0.7 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) FAINT PF04385.15 BAM39926.1 - 1.7e-09 37.6 12.2 1.9e-06 27.8 5.0 2.6 2 0 0 2 2 2 2 Domain of unknown function, DUF529 FAINT PF04385.15 BAM39927.1 - 1.1e-07 31.8 13.4 2.2e-06 27.6 5.0 3.1 3 1 0 3 3 3 2 Domain of unknown function, DUF529 DUF3437 PF11919.8 BAM39927.1 - 0.066 13.1 0.7 0.14 12.0 0.7 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3437) G10 PF01125.17 BAM39928.1 - 9.1e-57 190.9 0.4 1e-56 190.8 0.4 1.0 1 0 0 1 1 1 1 G10 protein Peptidase_M16 PF00675.20 BAM39929.1 - 3.5e-27 95.2 1.1 6.2e-27 94.4 0.1 1.8 2 1 1 3 3 3 1 Insulinase (Peptidase family M16) Peptidase_M16_C PF05193.21 BAM39929.1 - 1.3e-25 90.5 0.0 3.3e-25 89.2 0.0 1.8 1 0 0 1 1 1 1 Peptidase M16 inactive domain Lambda_CIII PF02061.16 BAM39931.1 - 0.11 12.5 0.1 2.1 8.4 0.1 2.2 2 0 0 2 2 2 0 Lambda Phage CIII DnaJ-X PF14308.6 BAM39933.1 - 3.7e-47 160.5 0.4 7.1e-47 159.6 0.0 1.6 2 0 0 2 2 2 1 X-domain of DnaJ-containing DnaJ PF00226.31 BAM39933.1 - 6.7e-22 77.4 2.3 1.1e-21 76.6 1.0 2.1 2 0 0 2 2 2 1 DnaJ domain ATG_C PF09333.11 BAM39933.1 - 0.00043 20.6 0.0 0.0022 18.3 0.0 2.2 2 0 0 2 2 2 1 Autophagy-related protein C terminal domain CAP PF00188.26 BAM39934.1 - 2.2e-15 57.6 0.2 4.8e-15 56.5 0.2 1.6 1 0 0 1 1 1 1 Cysteine-rich secretory protein family CRT-like PF08627.10 BAM39935.1 - 8.9e-50 169.5 28.7 1e-49 169.3 28.7 1.0 1 0 0 1 1 1 1 CRT-like, chloroquine-resistance transporter-like Staygreen PF12638.7 BAM39936.1 - 0.051 13.4 0.0 0.095 12.5 0.0 1.4 1 0 0 1 1 1 0 Staygreen protein AP2 PF00847.20 BAM39937.1 - 6.1e-11 42.4 1.1 1.1e-10 41.5 1.1 1.4 1 0 0 1 1 1 1 AP2 domain WD40 PF00400.32 BAM39938.1 - 3.4e-10 40.3 2.1 5.9e-06 26.9 0.0 4.1 4 0 0 4 4 4 2 WD domain, G-beta repeat WD40_like PF17005.5 BAM39938.1 - 6.1e-07 29.0 3.9 0.029 13.7 0.6 3.0 1 1 2 3 3 3 3 WD40-like domain ANAPC4_WD40 PF12894.7 BAM39938.1 - 0.00021 21.5 0.3 0.18 12.1 0.0 3.6 3 1 1 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain Kelch_2 PF07646.15 BAM39938.1 - 0.043 13.8 0.1 2.3 8.3 0.0 2.9 2 0 0 2 2 2 0 Kelch motif Mcl1_mid PF12341.8 BAM39938.1 - 0.046 13.1 0.1 0.26 10.6 0.0 1.9 2 0 0 2 2 2 0 Minichromosome loss protein, Mcl1, middle region PQQ_3 PF13570.6 BAM39938.1 - 0.064 13.8 0.0 9.2 6.9 0.0 3.6 4 0 0 4 4 4 0 PQQ-like domain Syntaxin PF00804.25 BAM39939.1 - 3.9e-18 65.9 11.5 5.5e-18 65.4 11.5 1.2 1 0 0 1 1 1 1 Syntaxin SNARE PF05739.19 BAM39939.1 - 9.3e-08 32.0 0.3 4e-07 29.9 0.1 2.3 2 0 0 2 2 2 1 SNARE domain Syntaxin_2 PF14523.6 BAM39939.1 - 0.0024 18.2 5.5 0.0024 18.2 5.5 2.9 2 2 0 2 2 2 1 Syntaxin-like protein DUF5039 PF16442.5 BAM39939.1 - 0.0093 15.5 8.9 0.031 13.8 3.4 2.3 2 0 0 2 2 2 2 Domain of unknown function (DUF5039) DUF4988 PF16378.5 BAM39939.1 - 0.042 13.5 5.7 1.9 8.1 0.6 2.3 2 0 0 2 2 2 0 Domain of unknown function MOLO1 PF17175.4 BAM39939.1 - 0.05 13.7 2.4 0.17 12.0 2.4 1.9 1 0 0 1 1 1 0 Modulator of levamisole receptor-1 Spectrin PF00435.21 BAM39939.1 - 0.069 13.6 4.1 1.2 9.6 0.1 2.7 2 0 0 2 2 2 0 Spectrin repeat zf-C2HE PF16278.5 BAM39939.1 - 0.14 12.6 0.6 0.35 11.3 0.1 2.0 2 0 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger DUF3818 PF12825.7 BAM39939.1 - 0.18 10.8 14.0 0.21 10.6 12.6 1.7 1 1 1 2 2 2 0 Domain of unknown function in PX-proteins (DUF3818) MAS20 PF02064.15 BAM39939.1 - 0.99 9.5 5.9 0.27 11.3 0.2 2.5 1 1 1 2 2 2 0 MAS20 protein import receptor Josephin PF02099.17 BAM39940.1 - 1.1e-25 90.6 0.1 1.4e-25 90.3 0.1 1.1 1 0 0 1 1 1 1 Josephin HmuY PF14064.6 BAM39940.1 - 0.062 13.5 0.0 0.081 13.1 0.0 1.2 1 0 0 1 1 1 0 HmuY protein IBN_N PF03810.19 BAM39941.1 - 1.7e-07 31.0 0.8 1.8e-06 27.7 0.1 3.3 2 0 0 2 2 2 1 Importin-beta N-terminal domain SAMP PF05924.11 BAM39945.1 - 0.17 11.2 0.9 0.35 10.2 0.9 1.5 1 0 0 1 1 1 0 SAMP Motif GCV_H PF01597.19 BAM39946.1 - 1.7e-08 34.4 0.0 2.6e-08 33.8 0.0 1.4 1 0 0 1 1 1 1 Glycine cleavage H-protein Ribosomal_L37e PF01907.19 BAM39947.1 - 3.7e-23 81.4 10.4 6.7e-23 80.6 10.4 1.4 1 0 0 1 1 1 1 Ribosomal protein L37e RNA_pol_N PF01194.17 BAM39949.1 - 4.7e-32 110.1 0.8 4.7e-32 110.1 0.8 1.3 2 0 0 2 2 2 1 RNA polymerases N / 8 kDa subunit Chordopox_RPO7 PF05864.12 BAM39949.1 - 0.069 13.4 0.3 0.069 13.4 0.3 1.7 1 1 1 2 2 2 0 Chordopoxvirus DNA-directed RNA polymerase 7 kDa polypeptide (RPO7) DUF3405 PF11885.8 BAM39949.1 - 0.17 10.5 0.1 0.2 10.2 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3405) Nkap_C PF06047.11 BAM39950.1 - 8.2e-42 141.5 3.7 8.2e-42 141.5 3.7 1.9 2 0 0 2 2 2 1 NF-kappa-B-activating protein C-terminal domain FAST_1 PF06743.15 BAM39952.1 - 0.095 12.7 1.9 0.61 10.1 0.0 3.0 4 0 0 4 4 4 0 FAST kinase-like protein, subdomain 1 APH PF01636.23 BAM39954.1 - 4.8e-11 43.0 0.0 1.9e-06 28.0 0.0 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 BAM39954.1 - 2.1e-07 30.5 0.1 4.4e-05 22.9 0.0 2.2 2 0 0 2 2 2 2 Lipopolysaccharide kinase (Kdo/WaaP) family RIO1 PF01163.22 BAM39954.1 - 1.4e-06 28.1 0.0 2.1e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 RIO1 family Pkinase PF00069.25 BAM39954.1 - 1.7e-06 27.6 0.1 2e-06 27.4 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM39954.1 - 9.5e-06 25.1 0.0 1e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase Choline_kinase PF01633.20 BAM39954.1 - 0.00066 19.3 0.0 0.62 9.6 0.0 2.2 1 1 1 2 2 2 2 Choline/ethanolamine kinase EcKinase PF02958.20 BAM39954.1 - 0.0097 15.3 0.0 0.01 15.2 0.0 1.2 1 0 0 1 1 1 1 Ecdysteroid kinase SCO1-SenC PF02630.14 BAM39955.1 - 2.8e-46 156.8 0.1 3.5e-46 156.4 0.1 1.1 1 0 0 1 1 1 1 SCO1/SenC AhpC-TSA PF00578.21 BAM39955.1 - 0.0014 18.5 0.2 0.0025 17.7 0.2 1.4 1 1 0 1 1 1 1 AhpC/TSA family CHASE9 PF17153.4 BAM39955.1 - 0.092 12.9 0.0 0.23 11.6 0.0 1.6 1 0 0 1 1 1 0 Periplasmic sensor domain, extracellular EndoU_bacteria PF14436.6 BAM39955.1 - 0.13 12.6 0.3 0.42 11.0 0.0 1.9 2 0 0 2 2 2 0 Bacterial EndoU nuclease HSP70 PF00012.20 BAM39956.1 - 9.2e-75 252.0 0.0 9.2e-75 252.0 0.0 3.4 3 1 0 3 3 3 2 Hsp70 protein FGGY_C PF02782.16 BAM39956.1 - 0.015 15.0 0.0 0.12 12.1 0.0 2.5 2 0 0 2 2 2 0 FGGY family of carbohydrate kinases, C-terminal domain HSP90 PF00183.18 BAM39957.1 - 6.3e-218 724.9 22.3 7.6e-209 694.9 18.8 2.1 1 1 1 2 2 2 2 Hsp90 protein HATPase_c PF02518.26 BAM39957.1 - 1.4e-13 51.3 0.0 2.5e-13 50.5 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 BAM39957.1 - 1e-10 41.6 0.1 2.4e-10 40.4 0.1 1.7 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LOH1CR12 PF10158.9 BAM39957.1 - 0.037 14.0 0.1 0.11 12.5 0.1 1.8 1 0 0 1 1 1 0 Tumour suppressor protein DUF4136 PF13590.6 BAM39957.1 - 0.089 13.4 0.2 0.43 11.2 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4136) Ribosomal_S20p PF01649.18 BAM39957.1 - 1.6 9.4 7.3 0.16 12.7 1.0 2.6 3 0 0 3 3 3 0 Ribosomal protein S20 Arf PF00025.21 BAM39958.1 - 3.3e-73 244.8 0.0 3.8e-73 244.6 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 BAM39958.1 - 6e-15 55.5 0.0 8e-15 55.1 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Ras PF00071.22 BAM39958.1 - 9.6e-13 48.0 0.0 1.1e-12 47.8 0.0 1.1 1 0 0 1 1 1 1 Ras family G-alpha PF00503.20 BAM39958.1 - 1.1e-12 47.8 0.2 2.7e-07 30.1 0.0 2.2 1 1 1 2 2 2 2 G-protein alpha subunit SRPRB PF09439.10 BAM39958.1 - 2.3e-11 43.5 0.0 2.8e-11 43.2 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Gtr1_RagA PF04670.12 BAM39958.1 - 6.1e-10 38.9 0.0 7.7e-10 38.5 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 BAM39958.1 - 6.1e-05 23.1 0.0 9.2e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase 6PF2K PF01591.18 BAM39958.1 - 0.0081 15.5 0.1 0.0097 15.2 0.1 1.3 1 1 0 1 1 1 1 6-phosphofructo-2-kinase Paf67 PF10255.9 BAM39960.1 - 2e-129 432.1 10.2 2.6e-129 431.8 10.2 1.1 1 0 0 1 1 1 1 RNA polymerase I-associated factor PAF67 NOG1_N PF17835.1 BAM39961.1 - 1.5e-47 161.6 1.2 5.5e-47 159.7 1.2 2.0 1 0 0 1 1 1 1 NOG1 N-terminal helical domain NOG1 PF06858.14 BAM39961.1 - 1.4e-25 88.8 0.3 3.2e-25 87.7 0.3 1.7 1 0 0 1 1 1 1 Nucleolar GTP-binding protein 1 (NOG1) NOGCT PF08155.11 BAM39961.1 - 4.6e-24 84.2 0.5 1.3e-23 82.8 0.5 1.8 1 0 0 1 1 1 1 NOGCT (NUC087) domain MMR_HSR1 PF01926.23 BAM39961.1 - 3e-16 59.5 0.0 9.4e-16 57.9 0.0 1.9 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 BAM39961.1 - 2.1e-09 37.1 0.0 6.3e-09 35.5 0.0 1.8 2 0 0 2 2 2 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 BAM39961.1 - 0.0026 17.7 0.0 0.91 9.4 0.0 2.8 2 1 0 2 2 2 2 RsgA GTPase Ras PF00071.22 BAM39961.1 - 0.01 15.4 0.0 0.034 13.7 0.0 1.9 1 1 0 1 1 1 0 Ras family Dynamin_N PF00350.23 BAM39961.1 - 0.52 10.3 4.5 13 5.8 0.0 3.1 3 1 1 4 4 4 0 Dynamin family LRR_4 PF12799.7 BAM39962.1 - 2.4e-07 31.0 19.3 0.0034 17.8 2.6 4.7 3 1 1 4 4 4 3 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 BAM39962.1 - 4e-07 29.7 3.0 4e-07 29.7 3.0 3.8 2 1 2 4 4 4 1 Leucine rich repeat CDKN3 PF05706.12 BAM39962.1 - 0.0064 16.2 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 Cyclin-dependent kinase inhibitor 3 (CDKN3) LRR_6 PF13516.6 BAM39962.1 - 0.015 15.3 7.4 19 5.6 0.2 5.3 4 0 0 4 4 4 0 Leucine Rich repeat LRR_1 PF00560.33 BAM39962.1 - 0.65 10.8 13.9 41 5.3 0.4 6.5 5 1 1 6 6 6 0 Leucine Rich Repeat Seryl_tRNA_N PF02403.22 BAM39963.1 - 6.2e-05 23.2 10.0 0.66 10.2 0.2 4.1 3 1 0 3 3 3 2 Seryl-tRNA synthetase N-terminal domain Dynamin_M PF01031.20 BAM39963.1 - 0.0037 16.5 1.0 0.0037 16.5 1.0 2.5 2 1 1 3 3 3 1 Dynamin central region ERM PF00769.19 BAM39963.1 - 0.0054 16.6 9.0 0.013 15.3 0.3 3.0 3 0 0 3 3 3 1 Ezrin/radixin/moesin family HALZ PF02183.18 BAM39963.1 - 0.022 14.9 5.7 0.39 11.0 0.6 4.1 3 0 0 3 3 3 0 Homeobox associated leucine zipper FapA PF03961.13 BAM39963.1 - 0.092 11.3 13.3 0.32 9.6 0.6 3.1 3 0 0 3 3 3 0 Flagellar Assembly Protein A Ribosomal_S20p PF01649.18 BAM39963.1 - 0.13 12.9 1.6 0.54 10.9 0.2 2.3 2 0 0 2 2 2 0 Ribosomal protein S20 GPS2_interact PF15784.5 BAM39963.1 - 0.23 11.9 3.4 0.23 11.9 0.3 2.5 2 0 0 2 2 2 0 G-protein pathway suppressor 2-interacting domain CENP-F_leu_zip PF10473.9 BAM39963.1 - 0.25 11.4 17.5 0.21 11.6 0.4 3.5 3 1 0 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4094 PF13334.6 BAM39963.1 - 0.28 11.6 2.9 6.7 7.2 0.1 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4094) PhoU PF01895.19 BAM39963.1 - 0.38 11.2 4.1 0.29 11.6 0.3 2.6 2 0 0 2 2 2 0 PhoU domain EspB PF05802.11 BAM39963.1 - 0.43 10.5 3.5 6.8 6.6 3.5 2.4 1 1 0 1 1 1 0 Enterobacterial EspB protein DivIC PF04977.15 BAM39963.1 - 0.45 10.3 11.9 1.5 8.6 0.6 3.5 3 1 0 3 3 3 0 Septum formation initiator FmdE PF02663.14 BAM39963.1 - 1 9.4 3.3 6.1 6.9 0.0 2.9 3 0 0 3 3 3 0 FmdE, Molybdenum formylmethanofuran dehydrogenase operon ADIP PF11559.8 BAM39963.1 - 2 8.5 11.2 6 6.9 0.3 3.4 3 0 0 3 3 3 0 Afadin- and alpha -actinin-Binding Tup_N PF08581.10 BAM39963.1 - 3.2 8.1 11.1 7.8 6.9 0.8 3.6 3 0 0 3 3 3 0 Tup N-terminal TMF_DNA_bd PF12329.8 BAM39963.1 - 3.3 7.8 17.2 5.3 7.1 0.7 4.3 3 1 0 3 3 3 0 TATA element modulatory factor 1 DNA binding XLF PF09302.11 BAM39963.1 - 3.7 7.7 11.8 1.2 9.3 0.2 3.5 3 2 1 4 4 4 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component DUF4337 PF14235.6 BAM39963.1 - 3.8 7.6 12.5 4.4 7.4 0.1 3.7 3 1 1 4 4 4 0 Domain of unknown function (DUF4337) Csm1_N PF18504.1 BAM39963.1 - 3.9 7.9 15.8 0.39 11.1 2.1 4.0 3 1 1 4 4 4 0 Csm1 N-terminal domain DUF641 PF04859.12 BAM39963.1 - 6.1 7.2 10.9 0.85 10.0 0.1 2.9 3 0 0 3 3 3 0 Plant protein of unknown function (DUF641) BLOC1_2 PF10046.9 BAM39963.1 - 7.9 6.9 14.8 0.71 10.2 0.4 4.2 3 2 2 5 5 5 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 GNAT_acetyltr_2 PF13718.6 BAM39964.1 - 3e-77 259.1 0.1 6.6e-77 257.9 0.1 1.6 1 0 0 1 1 1 1 GNAT acetyltransferase 2 Helicase_RecD PF05127.14 BAM39964.1 - 1.2e-49 168.5 0.0 2.8e-49 167.4 0.0 1.6 1 0 0 1 1 1 1 Helicase tRNA_bind_2 PF13725.6 BAM39964.1 - 6.9e-38 130.7 0.7 6.9e-38 130.7 0.7 2.0 2 0 0 2 2 2 1 Possible tRNA binding domain DUF1726 PF08351.11 BAM39964.1 - 3.7e-31 106.9 0.0 1e-30 105.5 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF1726) PAN_3 PF08277.12 BAM39965.1 - 0.094 12.5 0.4 0.15 11.9 0.4 1.3 1 0 0 1 1 1 0 PAN-like domain ATP-synt_DE_N PF02823.16 BAM39966.1 - 1.2e-11 44.3 0.0 1.8e-11 43.7 0.0 1.3 1 0 0 1 1 1 1 ATP synthase, Delta/Epsilon chain, beta-sandwich domain M16C_assoc PF08367.11 BAM39971.1 - 4.9e-35 120.9 6.8 4.9e-35 120.9 6.8 2.7 2 1 0 2 2 2 1 Peptidase M16C associated Peptidase_M16_C PF05193.21 BAM39971.1 - 3.4e-17 63.1 10.3 2.9e-15 56.7 1.1 4.0 3 1 0 3 3 3 2 Peptidase M16 inactive domain DUF4264 PF14084.6 BAM39971.1 - 0.045 13.4 0.0 0.22 11.2 0.0 2.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4264) Globin PF00042.22 BAM39971.1 - 0.82 10.3 6.2 0.56 10.8 0.4 3.6 3 0 0 3 3 3 0 Globin Ion_trans_2 PF07885.16 BAM39972.1 - 2e-09 37.3 1.7 2e-09 37.3 1.7 2.4 2 0 0 2 2 2 1 Ion channel BK_channel_a PF03493.18 BAM39972.1 - 2.8e-09 37.1 2.9 8.7e-09 35.5 0.3 3.0 3 1 0 3 3 3 1 Calcium-activated BK potassium channel alpha subunit M16C_assoc PF08367.11 BAM39973.1 - 8.6e-37 126.6 2.9 1.9e-36 125.5 2.9 1.5 1 0 0 1 1 1 1 Peptidase M16C associated Peptidase_M16_C PF05193.21 BAM39973.1 - 5.4e-19 68.9 4.5 8.7e-17 61.7 0.3 3.5 3 0 0 3 3 3 2 Peptidase M16 inactive domain Peptidase_M16 PF00675.20 BAM39973.1 - 3e-08 33.8 0.0 4.9e-06 26.6 0.0 3.1 3 0 0 3 3 3 1 Insulinase (Peptidase family M16) Herpes_IE2_3 PF03361.14 BAM39973.1 - 0.15 11.9 0.3 0.4 10.5 0.3 1.7 1 0 0 1 1 1 0 Herpes virus intermediate/early protein 2/3 zf-MIZ PF02891.20 BAM39974.1 - 6e-19 67.5 1.1 1.6e-18 66.2 1.1 1.8 1 0 0 1 1 1 1 MIZ/SP-RING zinc finger PHD PF00628.29 BAM39974.1 - 0.00018 21.3 14.9 0.014 15.3 7.8 2.7 2 0 0 2 2 2 2 PHD-finger zf-Nse PF11789.8 BAM39974.1 - 0.00098 18.9 1.6 0.003 17.3 1.0 2.2 2 0 0 2 2 2 1 Zinc-finger of the MIZ type in Nse subunit PINIT PF14324.6 BAM39974.1 - 0.0013 19.1 0.5 0.0029 18.0 0.5 1.6 1 0 0 1 1 1 1 PINIT domain zinc_ribbon_10 PF10058.9 BAM39974.1 - 0.058 13.1 6.9 1.8 8.4 0.6 2.7 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein PHD_4 PF16866.5 BAM39974.1 - 0.06 13.4 9.9 0.56 10.3 3.7 3.2 2 1 0 2 2 2 0 PHD-finger Rubredoxin_2 PF18073.1 BAM39974.1 - 0.37 10.6 5.2 2.1 8.2 0.3 2.5 2 0 0 2 2 2 0 Rubredoxin metal binding domain PHD_2 PF13831.6 BAM39974.1 - 2.5 7.7 12.0 0.044 13.4 2.0 2.8 2 1 0 2 2 2 0 PHD-finger zf-C3HC4_2 PF13923.6 BAM39974.1 - 3.4 7.6 12.2 6.6 6.7 3.1 3.2 2 1 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 BAM39974.1 - 6.9 7.1 14.6 5.2 7.5 6.1 2.8 2 0 0 2 2 2 0 Ring finger domain DUF900 PF05990.12 BAM39976.1 - 0.012 15.1 0.0 0.12 11.8 0.0 2.0 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF900) ATP-synt_E_2 PF08112.11 BAM39976.1 - 0.078 13.3 0.1 0.078 13.3 0.1 2.7 3 0 0 3 3 3 0 ATP synthase epsilon subunit DUF900 PF05990.12 BAM39977.1 - 1.1e-08 34.9 0.0 2.5e-08 33.7 0.0 1.5 1 0 0 1 1 1 1 Alpha/beta hydrolase of unknown function (DUF900) IGPS PF00218.21 BAM39979.1 - 2.8e-18 66.0 0.0 5.1e-18 65.2 0.0 1.4 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase His_biosynth PF00977.21 BAM39979.1 - 0.032 13.7 0.0 0.071 12.6 0.0 1.6 1 0 0 1 1 1 0 Histidine biosynthesis protein PUL PF08324.11 BAM39980.1 - 5.5e-12 45.5 1.0 8.1e-12 44.9 1.0 1.2 1 0 0 1 1 1 1 PUL domain WD40 PF00400.32 BAM39980.1 - 2.6e-11 43.9 7.2 0.00018 22.2 0.5 6.2 6 0 0 6 6 6 3 WD domain, G-beta repeat Ribosomal_L9_N PF01281.19 BAM39981.1 - 2.6e-15 55.7 0.0 7.5e-15 54.2 0.0 1.8 2 0 0 2 2 2 1 Ribosomal protein L9, N-terminal domain DUF2439 PF10382.9 BAM39982.1 - 8.8e-07 29.2 0.3 7.6e-06 26.2 0.2 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF2439) DNA_pol_E_B PF04042.16 BAM39983.1 - 2e-27 95.9 0.1 3.1e-27 95.3 0.1 1.3 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Rad51 PF08423.11 BAM39985.1 - 2.4e-05 23.7 0.1 4.3e-05 22.9 0.1 1.3 1 0 0 1 1 1 1 Rad51 NACHT PF05729.12 BAM39985.1 - 0.00059 19.8 0.0 0.0022 17.9 0.0 1.9 1 1 0 1 1 1 1 NACHT domain ATPase PF06745.13 BAM39985.1 - 0.0014 18.0 0.0 0.003 16.9 0.0 1.6 1 0 0 1 1 1 1 KaiC AAA_14 PF13173.6 BAM39985.1 - 0.025 14.6 0.2 0.025 14.6 0.2 3.1 3 1 0 3 3 3 0 AAA domain cobW PF02492.19 BAM39985.1 - 0.036 13.7 0.0 0.093 12.3 0.0 1.7 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain ResIII PF04851.15 BAM39985.1 - 0.57 10.2 0.0 0.57 10.2 0.0 3.0 2 1 0 3 3 3 0 Type III restriction enzyme, res subunit ABC_tran PF00005.27 BAM39985.1 - 1.4 9.5 10.0 16 6.0 10.1 2.6 1 1 0 1 1 1 0 ABC transporter DnaJ_C PF01556.18 BAM39986.1 - 1.1e-12 48.3 1.1 1.2e-09 38.5 1.5 2.4 1 1 1 2 2 2 2 DnaJ C terminal domain DnaJ_CXXCXGXG PF00684.19 BAM39986.1 - 1.6e-06 28.4 14.2 3.1e-06 27.5 14.2 1.5 1 0 0 1 1 1 1 DnaJ central domain DnaJ PF00226.31 BAM39986.1 - 3.3e-05 23.9 2.7 0.00028 21.0 2.7 2.3 1 1 0 1 1 1 1 DnaJ domain Elong-fact-P_C PF09285.11 BAM39986.1 - 0.03 14.1 1.9 0.38 10.5 0.1 2.5 2 0 0 2 2 2 0 Elongation factor P, C-terminal zinc_ribbon_15 PF17032.5 BAM39986.1 - 2.7 8.8 8.4 3.8 8.3 7.3 1.9 2 0 0 2 2 2 0 zinc-ribbon family ANAPC3 PF12895.7 BAM39987.1 - 4.7e-05 23.5 0.8 7.7e-05 22.8 0.8 1.4 1 0 0 1 1 1 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_6 PF13174.6 BAM39987.1 - 6.2e-05 23.4 0.6 0.0043 17.6 0.5 2.7 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_2 PF07719.17 BAM39987.1 - 6.9e-05 22.7 0.2 0.0012 18.8 0.3 2.6 3 0 0 3 3 3 1 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 BAM39987.1 - 0.0002 21.4 2.1 0.0002 21.4 2.1 1.7 2 0 0 2 2 2 1 Fis1 C-terminal tetratricopeptide repeat Fis1_TPR_N PF14852.6 BAM39987.1 - 0.0002 21.0 0.0 0.00036 20.1 0.0 1.5 1 0 0 1 1 1 1 Fis1 N-terminal tetratricopeptide repeat TPR_8 PF13181.6 BAM39987.1 - 0.00084 19.4 1.5 0.0017 18.4 0.9 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_19 PF14559.6 BAM39987.1 - 0.0019 18.6 0.0 0.0034 17.8 0.0 1.4 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_1 PF00515.28 BAM39987.1 - 0.0023 17.7 1.1 0.0077 16.0 1.1 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_12 PF13424.6 BAM39987.1 - 0.0058 16.9 0.1 0.022 15.0 0.0 1.8 1 1 0 1 1 1 1 Tetratricopeptide repeat TPR_17 PF13431.6 BAM39987.1 - 0.12 12.8 0.2 0.49 10.9 0.1 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat Ribosomal_L39 PF00832.20 BAM39989.1 - 7.3e-22 76.7 13.7 8.5e-22 76.5 13.7 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein DUF2197 PF09963.9 BAM39989.1 - 0.11 12.7 0.9 0.13 12.6 0.9 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2197) Tmemb_185A PF10269.9 BAM39993.1 - 0.24 11.0 3.4 0.4 10.3 3.3 1.4 1 1 0 1 1 1 0 Transmembrane Fragile-X-F protein RRM_1 PF00076.22 BAM39994.1 - 3.8e-17 61.9 0.0 6.2e-17 61.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF747 PF05346.11 BAM39997.1 - 8.3e-106 354.0 18.4 1e-105 353.7 18.4 1.1 1 0 0 1 1 1 1 Eukaryotic membrane protein family DUF2207 PF09972.9 BAM39997.1 - 1.8 7.2 7.7 5.6 5.6 7.5 1.9 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) DEAD PF00270.29 BAM39998.1 - 5.7e-35 120.7 2.9 1.4e-33 116.2 1.9 2.4 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM39998.1 - 4e-24 85.1 0.1 1.5e-23 83.2 0.0 2.1 2 0 0 2 2 2 1 Helicase conserved C-terminal domain Fe_dep_repress PF01325.19 BAM39998.1 - 0.0072 16.5 0.1 0.17 12.1 0.0 2.7 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain KaiA PF07688.12 BAM39998.1 - 0.014 15.5 1.1 0.052 13.7 1.1 1.9 1 0 0 1 1 1 0 KaiA C-terminal domain TnpW PF14202.6 BAM39998.1 - 0.048 13.5 0.3 0.2 11.5 0.1 2.1 2 0 0 2 2 2 0 Transposon-encoded protein TnpW AAA_22 PF13401.6 BAM39998.1 - 0.2 11.9 1.4 0.49 10.7 0.3 2.3 2 1 0 2 2 2 0 AAA domain Exo_endo_phos PF03372.23 BAM39999.1 - 8.5e-10 38.5 0.0 2.2e-09 37.2 0.0 1.7 1 1 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family UQ_con PF00179.26 BAM40000.1 - 6.6e-45 152.2 0.1 7.6e-45 152.0 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme RWD PF05773.22 BAM40000.1 - 0.0046 17.2 0.0 0.0065 16.8 0.0 1.3 1 0 0 1 1 1 1 RWD domain Prok-E2_B PF14461.6 BAM40000.1 - 0.0083 15.8 0.0 0.011 15.5 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic E2 family B Cpn60_TCP1 PF00118.24 BAM40001.1 - 3e-147 491.2 8.1 3.7e-147 490.9 8.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family NPL4 PF05021.15 BAM40001.1 - 0.036 13.4 0.1 0.17 11.2 0.0 1.9 2 0 0 2 2 2 0 NPL4 family Synaptobrevin PF00957.21 BAM40002.1 - 4e-19 68.2 0.8 4e-19 68.2 0.8 1.8 2 0 0 2 2 2 1 Synaptobrevin Longin PF13774.6 BAM40002.1 - 1.9e-18 66.3 1.3 6.5e-18 64.6 1.3 1.9 1 1 0 1 1 1 1 Regulated-SNARE-like domain RGS PF00615.19 BAM40002.1 - 0.0043 17.3 0.7 0.0077 16.5 0.7 1.4 1 0 0 1 1 1 1 Regulator of G protein signaling domain VWA_CoxE PF05762.14 BAM40002.1 - 0.021 14.2 0.0 0.033 13.6 0.0 1.2 1 0 0 1 1 1 0 VWA domain containing CoxE-like protein Fumarate_red_C PF02300.17 BAM40002.1 - 0.048 13.7 0.1 0.1 12.7 0.1 1.5 1 0 0 1 1 1 0 Fumarate reductase subunit C IPP-2 PF04979.14 BAM40003.1 - 2.6e-11 44.4 12.4 1.5e-10 41.9 12.4 1.9 1 1 0 1 1 1 1 Protein phosphatase inhibitor 2 (IPP-2) HA2 PF04408.23 BAM40004.1 - 7.1e-18 64.9 0.0 1.9e-17 63.5 0.0 1.8 1 0 0 1 1 1 1 Helicase associated domain (HA2) Helicase_C PF00271.31 BAM40004.1 - 5.6e-13 49.2 0.8 1.5e-11 44.6 0.2 3.1 2 1 0 2 2 2 1 Helicase conserved C-terminal domain OB_NTP_bind PF07717.16 BAM40004.1 - 8.8e-13 48.4 1.1 1.6e-12 47.6 0.2 2.0 2 0 0 2 2 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold DEAD PF00270.29 BAM40004.1 - 9.3e-11 41.8 0.1 1.9e-10 40.8 0.1 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 BAM40004.1 - 0.00049 20.2 0.0 0.0065 16.5 0.0 2.4 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_30 PF13604.6 BAM40004.1 - 0.00084 19.1 0.0 0.0016 18.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain Helicase_RecD PF05127.14 BAM40004.1 - 0.0017 18.2 0.0 0.0048 16.8 0.0 1.7 2 0 0 2 2 2 1 Helicase AAA_19 PF13245.6 BAM40004.1 - 0.0067 16.8 0.1 0.016 15.5 0.0 1.7 2 0 0 2 2 1 1 AAA domain AAA_22 PF13401.6 BAM40004.1 - 0.0069 16.7 0.0 0.019 15.3 0.0 1.7 1 0 0 1 1 1 1 AAA domain DUF87 PF01935.17 BAM40004.1 - 0.012 15.7 0.1 0.037 14.1 0.0 1.8 2 0 0 2 2 2 0 Helicase HerA, central domain T2SSE PF00437.20 BAM40004.1 - 0.012 14.7 0.0 0.022 13.8 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein ABC_tran PF00005.27 BAM40004.1 - 0.017 15.6 0.1 0.063 13.8 0.0 1.9 2 0 0 2 2 2 0 ABC transporter GTP-bdg_M PF16360.5 BAM40004.1 - 0.024 15.2 0.4 0.12 13.0 0.0 2.2 2 0 0 2 2 2 0 GTP-binding GTPase Middle Region Flavi_DEAD PF07652.14 BAM40004.1 - 0.063 13.2 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 Flavivirus DEAD domain Rad17 PF03215.15 BAM40004.1 - 0.097 12.6 1.0 1.1 9.1 0.0 3.0 3 1 0 3 3 3 0 Rad17 P-loop domain TrwB_AAD_bind PF10412.9 BAM40004.1 - 0.12 11.2 0.0 0.22 10.4 0.0 1.3 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain AAA_18 PF13238.6 BAM40004.1 - 0.64 10.6 2.0 20 5.7 0.3 2.9 3 1 0 3 3 2 0 AAA domain MFS_1 PF07690.16 BAM40005.1 - 8.3e-09 34.8 30.7 8.3e-09 34.8 30.7 1.9 2 1 1 3 3 3 2 Major Facilitator Superfamily Pro-rich_19 PF15455.6 BAM40005.1 - 0.21 10.7 0.0 0.28 10.3 0.0 1.1 1 0 0 1 1 1 0 Proline-rich 19 DUF1754 PF08555.10 BAM40006.1 - 0.00042 21.1 3.3 0.00042 21.1 3.3 2.2 2 0 0 2 2 2 1 Eukaryotic family of unknown function (DUF1754) L51_S25_CI-B8 PF05047.16 BAM40008.1 - 3.1e-07 30.2 0.0 5.1e-07 29.5 0.0 1.4 1 0 0 1 1 1 1 Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain Ribosomal_S17_N PF16205.5 BAM40009.1 - 7.2e-29 100.0 0.5 1.2e-28 99.2 0.5 1.4 1 0 0 1 1 1 1 Ribosomal_S17 N-terminal Ribosomal_S17 PF00366.20 BAM40009.1 - 5.4e-26 90.5 0.5 5.4e-26 90.5 0.5 1.9 2 0 0 2 2 2 1 Ribosomal protein S17 Nas2_N PF18265.1 BAM40011.1 - 6.5e-29 99.7 0.7 7.3e-29 99.5 0.7 1.0 1 0 0 1 1 1 1 Nas2 N_terminal domain CCDC-167 PF15188.6 BAM40011.1 - 0.5 10.7 5.0 2.8 8.3 5.0 1.9 1 1 0 1 1 1 0 Coiled-coil domain-containing protein 167 RRM_1 PF00076.22 BAM40013.1 - 0.0059 16.4 0.0 0.012 15.4 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) COX4 PF02936.14 BAM40015.1 - 0.00027 20.9 0.0 0.00042 20.3 0.0 1.2 1 0 0 1 1 1 1 Cytochrome c oxidase subunit IV GH-E PF14410.6 BAM40015.1 - 0.074 13.5 0.4 0.074 13.5 0.4 1.9 2 0 0 2 2 2 0 HNH/ENDO VII superfamily nuclease with conserved GHE residues CSN8_PSD8_EIF3K PF10075.9 BAM40017.1 - 2.6e-17 63.1 0.0 3.8e-17 62.6 0.0 1.2 1 0 0 1 1 1 1 CSN8/PSMD8/EIF3K family Adaptin_N PF01602.20 BAM40018.1 - 3.5e-100 336.0 7.7 2.5e-71 240.8 2.2 2.0 1 1 1 2 2 2 2 Adaptin N terminal region Cnd1 PF12717.7 BAM40018.1 - 2.2e-55 187.1 3.0 3.8e-54 183.1 0.0 3.3 3 1 0 3 3 3 1 non-SMC mitotic condensation complex subunit 1 HEAT PF02985.22 BAM40018.1 - 1.4e-13 49.8 0.2 0.0047 17.1 0.0 5.6 4 0 0 4 4 4 2 HEAT repeat HEAT_2 PF13646.6 BAM40018.1 - 3.8e-12 46.4 0.1 3.3e-06 27.4 0.0 5.3 5 2 2 7 7 7 2 HEAT repeats B2-adapt-app_C PF09066.10 BAM40018.1 - 6e-07 29.5 0.0 2.5e-06 27.6 0.0 2.2 1 0 0 1 1 1 1 Beta2-adaptin appendage, C-terminal sub-domain RTP1_C1 PF10363.9 BAM40018.1 - 0.00043 20.4 0.0 0.005 17.0 0.0 2.8 1 1 0 2 2 2 1 Required for nuclear transport of RNA pol II C-terminus 1 HEAT_EZ PF13513.6 BAM40018.1 - 0.00076 19.9 0.1 6.7 7.3 0.0 3.8 3 0 0 3 3 3 2 HEAT-like repeat Arm PF00514.23 BAM40018.1 - 0.42 10.7 3.7 3.6 7.7 0.0 3.9 5 0 0 5 5 5 0 Armadillo/beta-catenin-like repeat Ribosomal_L7Ae PF01248.26 BAM40019.1 - 2e-22 78.7 0.0 2.4e-22 78.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JAB PF01398.21 BAM40021.1 - 2.7e-07 30.6 0.0 1.4e-05 25.0 0.0 2.4 1 1 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease tRNA-synt_1 PF00133.22 BAM40023.1 - 2.8e-201 669.9 0.2 4e-201 669.4 0.2 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 BAM40023.1 - 8.4e-20 71.3 0.5 2.3e-19 69.8 0.2 1.9 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 BAM40023.1 - 9.9e-12 44.3 7.8 0.00064 18.6 0.1 4.8 4 1 0 4 4 4 3 tRNA synthetases class I (M) DUF3052 PF11253.8 BAM40023.1 - 0.089 12.7 1.6 0.2 11.6 1.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3052) DUF16 PF01519.16 BAM40023.1 - 3.8 8.0 5.9 5.6 7.5 0.3 2.8 2 1 0 2 2 2 0 Protein of unknown function DUF16 Cpn10 PF00166.21 BAM40024.1 - 4e-29 100.5 0.2 2.2e-13 50.0 0.1 2.2 2 0 0 2 2 2 2 Chaperonin 10 Kd subunit NTP_transf_2 PF01909.23 BAM40025.1 - 5.5e-07 29.8 0.0 1.9e-06 28.0 0.0 2.0 1 0 0 1 1 1 1 Nucleotidyltransferase domain PAP_assoc PF03828.19 BAM40025.1 - 0.00041 20.5 0.1 0.0011 19.1 0.1 1.8 1 0 0 1 1 1 1 Cid1 family poly A polymerase Med11 PF10280.9 BAM40025.1 - 0.027 14.9 0.4 0.075 13.5 0.4 1.7 1 0 0 1 1 1 0 Mediator complex protein DUF4483 PF14825.6 BAM40025.1 - 0.088 12.6 0.8 0.17 11.7 0.8 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4483) CENP-Q PF13094.6 BAM40025.1 - 0.13 12.4 5.5 1.7 8.8 0.4 2.3 2 0 0 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit Sedlin_N PF04628.13 BAM40026.1 - 1e-36 126.0 0.1 1.3e-36 125.6 0.1 1.1 1 0 0 1 1 1 1 Sedlin, N-terminal conserved region Sybindin PF04099.12 BAM40026.1 - 0.011 15.7 0.0 0.06 13.3 0.0 1.9 2 0 0 2 2 2 0 Sybindin-like family Ins_allergen_rp PF06757.13 BAM40026.1 - 0.057 13.4 0.0 0.078 12.9 0.0 1.3 1 0 0 1 1 1 0 Insect allergen related repeat, nitrile-specifier detoxification CC2-LZ PF16516.5 BAM40027.1 - 0.17 12.3 6.3 0.29 11.5 3.4 2.6 2 0 0 2 2 2 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator RAP PF08373.10 BAM40028.1 - 0.04 14.0 0.1 0.13 12.4 0.1 1.9 1 0 0 1 1 1 0 RAP domain TRAPP PF04051.16 BAM40029.1 - 8e-21 74.3 0.0 1e-20 73.9 0.0 1.1 1 0 0 1 1 1 1 Transport protein particle (TRAPP) component DEAD PF00270.29 BAM40030.1 - 3.5e-43 147.4 0.0 1e-42 145.9 0.0 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM40030.1 - 2.4e-31 108.4 0.0 6.8e-31 106.9 0.0 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain UTP25 PF06862.12 BAM40030.1 - 0.088 11.6 0.0 0.32 9.7 0.0 1.9 1 1 0 1 1 1 0 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 Ribosomal_L27A PF00828.19 BAM40031.1 - 2.6e-23 83.1 0.0 3.5e-23 82.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Nucleoporin_FG PF13634.6 BAM40032.1 - 5.5e-17 62.4 378.6 1.8e-05 25.5 38.6 12.0 2 1 10 12 12 12 7 Nucleoporin FG repeat region MPM1 PF17234.2 BAM40032.1 - 0.051 13.8 0.2 0.1 12.9 0.2 1.4 1 0 0 1 1 1 0 Mitochondrial peculiar membrane protein 1 DUF2955 PF11168.8 BAM40032.1 - 0.77 9.6 2.5 1.9e+02 1.9 0.1 4.2 3 0 0 3 3 3 0 Protein of unknown function (DUF2955) DUF848 PF05852.11 BAM40032.1 - 4.4 7.4 5.1 1.4 9.0 2.0 1.7 2 0 0 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) Thymidylate_kin PF02223.17 BAM40033.1 - 1.2e-39 135.9 0.0 1.5e-39 135.6 0.0 1.0 1 0 0 1 1 1 1 Thymidylate kinase KTI12 PF08433.10 BAM40033.1 - 0.0026 17.3 0.1 0.0099 15.3 0.1 1.8 1 1 0 1 1 1 1 Chromatin associated protein KTI12 AAA_18 PF13238.6 BAM40033.1 - 0.012 16.2 0.0 0.016 15.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain dNK PF01712.19 BAM40033.1 - 0.017 15.0 0.0 0.079 12.8 0.0 1.9 2 0 0 2 2 2 0 Deoxynucleoside kinase MeaB PF03308.16 BAM40033.1 - 0.041 12.9 0.0 0.057 12.4 0.0 1.1 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_14 PF13173.6 BAM40033.1 - 0.12 12.4 0.0 0.3 11.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain Pkinase PF00069.25 BAM40034.1 - 1.8e-53 181.6 0.0 5.2e-42 144.0 0.0 2.2 1 1 1 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 BAM40034.1 - 1.8e-24 86.4 0.0 5.8e-24 84.8 0.0 1.8 1 1 1 2 2 2 1 Protein tyrosine kinase APH PF01636.23 BAM40034.1 - 0.014 15.3 0.0 0.033 14.1 0.0 1.6 1 1 0 1 1 1 0 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 BAM40034.1 - 0.029 13.1 0.0 0.069 11.9 0.0 1.5 2 0 0 2 2 2 0 Fungal protein kinase Kdo PF06293.14 BAM40034.1 - 0.061 12.7 0.0 0.42 9.9 0.0 2.0 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Glyco_hydro_63 PF03200.16 BAM40034.1 - 0.13 11.0 0.0 0.47 9.1 0.0 1.8 2 0 0 2 2 2 0 Glycosyl hydrolase family 63 C-terminal domain LPD26 PF18842.1 BAM40035.1 - 0.1 12.6 0.0 0.29 11.1 0.0 1.7 1 0 0 1 1 1 0 Large polyvalent protein associated domain 26 tRNA-synt_1c PF00749.21 BAM40036.1 - 1.8e-103 345.7 0.0 2.6e-103 345.2 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 BAM40036.1 - 3.1e-43 147.7 0.1 5.2e-43 146.9 0.1 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain PTPLA PF04387.14 BAM40036.1 - 1e-07 31.8 5.5 1e-07 31.8 5.5 1.6 2 0 0 2 2 2 1 Protein tyrosine phosphatase-like protein, PTPLA Ribosomal_L14 PF00238.19 BAM40037.1 - 1.6e-34 118.6 0.0 1.9e-34 118.3 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e SNARE PF05739.19 BAM40038.1 - 3.8e-10 39.6 0.8 3.8e-10 39.6 0.8 2.6 3 0 0 3 3 3 1 SNARE domain FAM184 PF15665.5 BAM40038.1 - 0.1 12.3 8.7 0.095 12.5 7.3 1.7 1 1 0 1 1 1 0 Family with sequence similarity 184, A and B Endotoxin_N PF03945.14 BAM40038.1 - 0.41 10.3 10.0 0.054 13.2 5.0 1.9 2 0 0 2 2 2 0 delta endotoxin, N-terminal domain Fra10Ac1 PF09725.9 BAM40039.1 - 1.6e-33 115.5 2.8 3.8e-33 114.2 2.8 1.6 1 0 0 1 1 1 1 Folate-sensitive fragile site protein Fra10Ac1 DUF3161 PF11362.8 BAM40039.1 - 1.7e-33 114.4 2.2 3.2e-33 113.5 0.3 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF3161) SKA2 PF16740.5 BAM40039.1 - 3.1e-07 30.1 2.8 3.1e-07 30.1 2.8 2.1 2 1 0 2 2 2 1 Spindle and kinetochore-associated protein 2 SKA1 PF07160.12 BAM40039.1 - 0.0016 18.3 13.3 0.0059 16.5 9.6 2.9 1 1 2 3 3 3 1 Spindle and kinetochore-associated protein 1 DASH_Dad1 PF08649.10 BAM40039.1 - 0.049 13.8 0.6 0.53 10.5 0.1 2.7 2 0 0 2 2 2 0 DASH complex subunit Dad1 ABC_tran_CTD PF16326.5 BAM40039.1 - 0.054 13.8 0.5 0.75 10.1 0.0 2.6 2 0 0 2 2 2 0 ABC transporter C-terminal domain Seryl_tRNA_N PF02403.22 BAM40039.1 - 7.4 6.9 10.7 0.37 11.1 2.5 2.6 3 0 0 3 3 3 0 Seryl-tRNA synthetase N-terminal domain ETC_C1_NDUFA5 PF04716.14 BAM40039.1 - 7.6 6.4 6.4 1.4 8.8 0.4 2.7 3 0 0 3 3 3 0 ETC complex I subunit conserved region LCCL PF03815.19 BAM40040.1 - 1.7e-21 76.1 0.5 8.1e-21 74.0 0.5 2.2 1 0 0 1 1 1 1 LCCL domain F5_F8_type_C PF00754.25 BAM40040.1 - 5.2e-18 65.4 0.4 5.9e-09 36.1 0.0 2.7 2 0 0 2 2 2 2 F5/8 type C domain DUF1080 PF06439.11 BAM40040.1 - 6.1e-07 29.7 0.5 1.4e-05 25.3 0.1 2.6 2 0 0 2 2 2 1 Domain of Unknown Function (DUF1080) Ricin_B_lectin PF00652.22 BAM40040.1 - 1.2e-06 28.8 1.8 5.8e-06 26.6 1.8 2.1 1 1 0 1 1 1 1 Ricin-type beta-trefoil lectin domain Fibrinogen_C PF00147.18 BAM40040.1 - 0.015 15.1 0.7 0.054 13.3 0.0 2.2 2 0 0 2 2 2 0 Fibrinogen beta and gamma chains, C-terminal globular domain IIGP PF05049.13 BAM40040.1 - 0.044 12.8 0.1 0.081 12.0 0.1 1.3 1 0 0 1 1 1 0 Interferon-inducible GTPase (IIGP) DUF468 PF04318.12 BAM40041.1 - 0.024 15.3 0.5 0.055 14.2 0.5 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF468) FlgD_ig PF13860.6 BAM40041.1 - 0.046 13.6 0.2 0.074 12.9 0.2 1.3 1 0 0 1 1 1 0 FlgD Ig-like domain ToxB_N PF18224.1 BAM40041.1 - 0.31 11.0 1.3 1.1 9.3 0.7 2.0 1 1 1 2 2 2 0 ToxB N-terminal domain DUF4073 PF13285.6 BAM40042.1 - 0.006 16.2 1.4 0.01 15.5 0.4 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4073) Phage_Mu_Gam PF07352.12 BAM40042.1 - 0.027 14.4 0.4 0.045 13.7 0.4 1.3 1 0 0 1 1 1 0 Bacteriophage Mu Gam like protein FAINT PF04385.15 BAM40042.1 - 1.2 9.2 29.7 0.19 11.8 0.7 5.0 4 2 0 4 4 4 0 Domain of unknown function, DUF529 Bromodomain PF00439.25 BAM40044.1 - 1.9e-17 63.1 2.3 5.1e-17 61.7 2.3 1.8 1 0 0 1 1 1 1 Bromodomain Pox_MCEL PF03291.16 BAM40045.1 - 3.1e-50 171.2 7.7 4.2e-50 170.7 7.7 1.3 1 0 0 1 1 1 1 mRNA capping enzyme Methyltransf_25 PF13649.6 BAM40045.1 - 1.4e-11 45.0 0.0 3.6e-11 43.6 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAM40045.1 - 1.4e-09 37.9 0.2 1e-08 35.1 0.0 2.4 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_12 PF08242.12 BAM40045.1 - 8.3e-09 36.1 0.0 2.6e-08 34.5 0.0 1.9 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 BAM40045.1 - 1e-08 35.7 0.0 2.2e-08 34.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 BAM40045.1 - 1.9e-08 34.4 0.0 4.6e-08 33.1 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 BAM40045.1 - 0.035 13.7 0.0 0.16 11.6 0.0 2.1 2 0 0 2 2 2 0 Methionine biosynthesis protein MetW EMP24_GP25L PF01105.24 BAM40046.1 - 1.4e-20 74.0 0.2 1.6e-20 73.9 0.2 1.0 1 0 0 1 1 1 1 emp24/gp25L/p24 family/GOLD ThiF PF00899.21 BAM40047.1 - 5.6e-37 127.4 0.0 7.3e-30 104.1 0.0 3.2 2 1 1 3 3 3 2 ThiF family Shikimate_DH PF01488.20 BAM40047.1 - 4.7e-07 29.9 0.1 0.021 14.9 0.0 2.8 2 0 0 2 2 2 2 Shikimate / quinate 5-dehydrogenase UBA_e1_thiolCys PF10585.9 BAM40047.1 - 0.0001 22.3 0.4 0.057 13.3 0.0 3.1 3 0 0 3 3 3 2 Ubiquitin-activating enzyme active site ApbA PF02558.16 BAM40047.1 - 0.028 14.1 0.0 2.7 7.6 0.0 2.6 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA NAD_binding_7 PF13241.6 BAM40047.1 - 0.069 13.6 0.0 5.4 7.5 0.0 2.8 2 0 0 2 2 2 0 Putative NAD(P)-binding Pyr_redox_2 PF07992.14 BAM40047.1 - 0.16 11.2 0.0 0.41 9.8 0.0 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase DEAD PF00270.29 BAM40048.1 - 2.2e-38 131.8 0.0 2.4e-36 125.1 0.0 2.3 2 0 0 2 2 2 2 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM40048.1 - 2.1e-29 102.1 0.1 8.4e-29 100.2 0.1 2.1 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM40048.1 - 7.9e-06 26.0 0.0 2.5e-05 24.4 0.0 1.9 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SNF2_N PF00176.23 BAM40048.1 - 0.05 12.3 0.0 0.083 11.6 0.0 1.3 1 0 0 1 1 1 0 SNF2 family N-terminal domain eIF-6 PF01912.18 BAM40049.1 - 7.3e-74 247.4 0.9 1.1e-73 246.8 0.9 1.3 1 0 0 1 1 1 1 eIF-6 family TypeIII_RM_meth PF12564.8 BAM40049.1 - 0.11 12.6 0.1 0.54 10.4 0.1 2.2 1 1 0 1 1 1 0 Type III restriction/modification enzyme methylation subunit AP_endonuc_2 PF01261.24 BAM40050.1 - 3.4e-33 114.9 0.0 5.2e-33 114.3 0.0 1.3 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel FAINT PF04385.15 BAM40052.1 - 1.3e-13 50.8 12.1 9.7e-07 28.8 2.2 3.9 3 0 0 3 3 3 3 Domain of unknown function, DUF529 ANAPC2 PF08672.11 BAM40053.1 - 0.025 15.1 2.5 0.091 13.3 1.1 2.7 2 0 0 2 2 2 0 Anaphase promoting complex (APC) subunit 2 FAINT PF04385.15 BAM40054.1 - 2.6e-08 33.8 0.1 4.9e-08 32.9 0.1 1.5 1 0 0 1 1 1 1 Domain of unknown function, DUF529 DUF4585 PF15232.6 BAM40054.1 - 0.0028 17.7 1.9 2.2 8.4 0.1 4.1 2 2 2 4 4 4 2 Domain of unknown function (DUF4585) Prion PF00377.18 BAM40054.1 - 0.092 12.6 0.1 0.19 11.6 0.1 1.4 1 0 0 1 1 1 0 Prion/Doppel alpha-helical domain FAINT PF04385.15 BAM40056.1 - 1.7e-38 130.5 54.5 7.2e-06 26.0 0.5 10.8 10 0 0 10 10 10 10 Domain of unknown function, DUF529 DUF5570 PF17731.1 BAM40056.1 - 0.025 14.7 1.4 0.28 11.3 0.1 2.7 3 0 0 3 3 3 0 Family of unknown function (DUF5570) Voldacs PF03517.13 BAM40057.1 - 1e-13 51.6 0.6 1.7e-11 44.4 0.6 2.2 1 1 0 1 1 1 1 Regulator of volume decrease after cellular swelling Vps36_ESCRT-II PF11605.8 BAM40057.1 - 0.00011 22.3 0.0 0.00017 21.7 0.0 1.3 1 0 0 1 1 1 1 Vacuolar protein sorting protein 36 Vps36 BBL5 PF07289.11 BAM40057.1 - 0.00014 21.0 0.0 0.00018 20.7 0.0 1.1 1 0 0 1 1 1 1 Bardet-Biedl syndrome 5 protein PH_TFIIH PF08567.11 BAM40057.1 - 0.11 12.8 0.0 0.24 11.7 0.0 1.7 1 1 0 1 1 1 0 TFIIH p62 subunit, N-terminal domain PRC2_HTH_1 PF18118.1 BAM40058.1 - 0.097 13.5 0.9 1.8 9.4 0.1 2.2 2 0 0 2 2 2 0 Polycomb repressive complex 2 tri-helical domain ANAPC4_WD40 PF12894.7 BAM40059.1 - 8.9e-05 22.7 0.1 0.46 10.8 0.0 3.7 3 0 0 3 3 3 2 Anaphase-promoting complex subunit 4 WD40 domain Aph-1 PF06105.12 BAM40059.1 - 0.088 12.2 0.0 0.17 11.3 0.0 1.4 1 0 0 1 1 1 0 Aph-1 protein Atg8 PF02991.16 BAM40060.1 - 1.2e-21 76.8 0.4 2.2e-21 76.0 0.4 1.4 1 1 0 1 1 1 1 Autophagy protein Atg8 ubiquitin like APG12 PF04110.13 BAM40060.1 - 0.036 14.5 0.2 0.09 13.2 0.2 1.7 1 1 0 1 1 1 0 Ubiquitin-like autophagy protein Apg12 tRNA_Me_trans PF03054.16 BAM40061.1 - 3.9e-94 315.4 0.0 6.3e-94 314.7 0.0 1.3 1 0 0 1 1 1 1 tRNA methyl transferase Asn_synthase PF00733.21 BAM40061.1 - 5.2e-05 23.1 0.0 9.6e-05 22.2 0.0 1.3 1 0 0 1 1 1 1 Asparagine synthase ThiI PF02568.14 BAM40061.1 - 0.00015 21.4 0.0 0.00083 19.0 0.0 2.1 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 BAM40061.1 - 0.0009 18.8 0.0 0.0026 17.3 0.0 1.7 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC SufE PF02657.15 BAM40061.1 - 0.0019 18.0 0.0 0.0049 16.7 0.0 1.6 1 0 0 1 1 1 1 Fe-S metabolism associated domain ATP_bind_3 PF01171.20 BAM40061.1 - 0.023 14.5 0.1 0.21 11.4 0.0 2.2 2 0 0 2 2 2 0 PP-loop family DUF3112 PF11309.8 BAM40062.1 - 0.0097 15.4 0.0 0.015 14.8 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3112) TMEM154 PF15102.6 BAM40062.1 - 0.032 14.1 0.0 0.089 12.7 0.0 1.8 1 0 0 1 1 1 0 TMEM154 protein family Sigma_reg_N PF13800.6 BAM40062.1 - 0.067 13.5 2.4 0.23 11.8 2.4 1.9 1 0 0 1 1 1 0 Sigma factor regulator N-terminal FAINT PF04385.15 BAM40063.1 - 0.0012 18.9 41.7 0.015 15.3 3.4 6.7 5 2 0 5 5 5 4 Domain of unknown function, DUF529 ABC_tran PF00005.27 BAM40064.1 - 2.5e-30 105.8 0.0 1.2e-16 61.5 0.0 2.4 2 0 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 BAM40064.1 - 3.6e-05 23.6 25.9 3.6e-05 23.6 25.9 4.1 5 0 0 5 5 4 1 ABC transporter transmembrane region AAA_29 PF13555.6 BAM40064.1 - 7.7e-05 22.4 0.2 0.16 11.7 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_23 PF13476.6 BAM40064.1 - 8.8e-05 23.1 0.4 0.7 10.4 0.1 2.9 2 0 0 2 2 2 2 AAA domain RsgA_GTPase PF03193.16 BAM40064.1 - 0.00014 21.8 0.4 0.055 13.4 0.1 2.7 2 0 0 2 2 2 1 RsgA GTPase Zeta_toxin PF06414.12 BAM40064.1 - 0.0003 20.1 0.1 0.049 12.9 0.0 2.3 2 0 0 2 2 2 1 Zeta toxin AAA_16 PF13191.6 BAM40064.1 - 0.0003 21.2 0.0 0.48 10.8 0.0 2.4 2 0 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 BAM40064.1 - 0.0009 19.5 0.2 0.32 11.3 0.0 2.6 2 0 0 2 2 2 1 AAA domain TsaE PF02367.17 BAM40064.1 - 0.0011 19.0 0.1 1.5 8.8 0.0 2.4 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_21 PF13304.6 BAM40064.1 - 0.0013 18.7 0.0 9.5 5.9 0.0 3.7 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system T2SSE PF00437.20 BAM40064.1 - 0.0013 17.9 0.1 0.4 9.7 0.0 2.4 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_30 PF13604.6 BAM40064.1 - 0.0015 18.3 0.7 0.24 11.1 0.0 2.2 2 0 0 2 2 2 1 AAA domain MeaB PF03308.16 BAM40064.1 - 0.0032 16.5 0.1 0.2 10.6 0.0 2.2 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_25 PF13481.6 BAM40064.1 - 0.011 15.3 0.1 2.4 7.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 BAM40064.1 - 0.015 15.5 0.5 1.7 8.8 0.0 2.4 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 BAM40064.1 - 0.016 14.8 2.0 2.5 7.6 0.0 2.9 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain AAA_24 PF13479.6 BAM40064.1 - 0.023 14.4 0.2 2.8 7.6 0.0 2.4 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 BAM40064.1 - 0.026 14.4 0.7 1.5 8.7 0.1 2.5 2 0 0 2 2 2 0 NACHT domain FtsK_SpoIIIE PF01580.18 BAM40064.1 - 0.03 13.7 0.1 2.2 7.6 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_7 PF12775.7 BAM40064.1 - 0.033 13.7 1.1 6.8 6.2 0.1 2.6 2 0 0 2 2 2 0 P-loop containing dynein motor region TrwB_AAD_bind PF10412.9 BAM40064.1 - 0.044 12.7 0.8 1.5 7.6 0.1 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain ATP_bind_1 PF03029.17 BAM40064.1 - 0.048 13.5 0.4 7 6.4 0.1 2.5 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein SMC_N PF02463.19 BAM40064.1 - 0.049 13.1 0.1 2 7.8 0.1 2.5 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain SRP54 PF00448.22 BAM40064.1 - 0.052 13.2 1.4 0.25 11.0 0.0 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain DnaB_C PF03796.15 BAM40064.1 - 0.061 12.7 0.1 6.3 6.0 0.0 2.2 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain IstB_IS21 PF01695.17 BAM40064.1 - 0.065 13.0 0.1 9.4 5.9 0.0 2.9 3 0 0 3 3 3 0 IstB-like ATP binding protein MobB PF03205.14 BAM40064.1 - 0.069 13.0 0.4 4 7.4 0.1 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B MMR_HSR1 PF01926.23 BAM40064.1 - 0.072 13.2 0.1 1 9.5 0.0 2.4 2 0 0 2 2 2 0 50S ribosome-binding GTPase PduV-EutP PF10662.9 BAM40064.1 - 0.084 12.6 1.1 0.23 11.2 0.1 2.2 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_5 PF07728.14 BAM40064.1 - 0.091 12.8 0.4 17 5.4 0.0 2.5 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) DUF815 PF05673.13 BAM40064.1 - 0.1 11.8 0.1 3.2 6.8 0.0 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF815) AAA_19 PF13245.6 BAM40064.1 - 0.19 12.1 1.4 7.8 6.8 0.1 2.4 2 0 0 2 2 2 0 AAA domain AAA_28 PF13521.6 BAM40064.1 - 0.23 11.7 1.4 9.7 6.4 0.1 2.3 2 0 0 2 2 2 0 AAA domain DnaJ PF00226.31 BAM40066.1 - 2.7e-07 30.6 1.6 5.8e-07 29.5 0.2 2.3 2 0 0 2 2 2 1 DnaJ domain Proteasom_Rpn13 PF04683.13 BAM40067.1 - 7.4e-23 80.9 0.0 9e-23 80.6 0.0 1.1 1 0 0 1 1 1 1 Proteasome complex subunit Rpn13 ubiquitin receptor UCH PF00443.29 BAM40068.1 - 3.5e-35 121.7 10.0 5.3e-33 114.6 10.0 2.7 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 BAM40068.1 - 3.6e-23 82.7 11.5 1.2e-22 81.0 11.5 1.9 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase GLEYA PF10528.9 BAM40068.1 - 0.47 10.9 9.5 35 4.9 0.1 4.5 2 1 2 4 4 4 0 GLEYA domain DUF1743 PF08489.11 BAM40069.1 - 0.12 12.4 0.1 0.16 12.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1743) SHS2_Rpb7-N PF03876.17 BAM40070.1 - 7.7e-10 39.0 0.0 1.4e-09 38.2 0.0 1.5 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 Nop53 PF07767.11 BAM40071.1 - 1.3e-21 77.5 16.5 1.3e-21 77.5 16.5 1.7 1 1 0 1 1 1 1 Nop53 (60S ribosomal biogenesis) Nucleoporin_FG2 PF15967.5 BAM40071.1 - 0.76 8.2 4.1 1.1 7.7 4.1 1.1 1 0 0 1 1 1 0 Nucleoporin FG repeated region VSG_B PF13206.6 BAM40071.1 - 7 5.8 10.8 10 5.2 10.8 1.3 1 0 0 1 1 1 0 Trypanosomal VSG domain Ribosomal_S9 PF00380.19 BAM40072.1 - 9.4e-30 103.6 0.3 1.7e-29 102.8 0.3 1.4 1 0 0 1 1 1 1 Ribosomal protein S9/S16 CorA PF01544.18 BAM40073.1 - 0.023 14.0 2.4 0.035 13.4 2.4 1.2 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein SOGA PF11365.8 BAM40073.1 - 0.037 15.1 1.9 0.11 13.7 0.2 2.4 1 1 0 2 2 2 0 Protein SOGA FTA4 PF13093.6 BAM40073.1 - 0.35 10.8 9.5 0.43 10.4 9.5 1.4 1 1 0 1 1 1 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 DUF3450 PF11932.8 BAM40073.1 - 0.51 9.6 6.2 2.2 7.5 2.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) zf-CCHC_2 PF13696.6 BAM40074.1 - 5.2e-06 26.2 6.0 5.2e-06 26.2 6.0 2.4 2 0 0 2 2 2 1 Zinc knuckle zf-C3HC4_4 PF15227.6 BAM40074.1 - 0.00011 22.3 15.1 0.00011 22.3 15.1 1.9 2 0 0 2 2 2 1 zinc finger of C3HC4-type, RING zf-RING_2 PF13639.6 BAM40074.1 - 0.0002 21.6 13.9 0.0002 21.6 13.9 1.9 2 0 0 2 2 2 1 Ring finger domain zf-RING_UBOX PF13445.6 BAM40074.1 - 0.00059 19.8 12.5 0.0013 18.8 12.5 1.6 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_2 PF13923.6 BAM40074.1 - 0.0039 17.0 14.6 0.0039 17.0 14.6 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 BAM40074.1 - 0.0093 15.8 16.4 0.0093 15.8 16.4 1.9 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-CCHC PF00098.23 BAM40074.1 - 0.047 13.8 5.6 0.13 12.4 5.6 1.8 1 0 0 1 1 1 0 Zinc knuckle zf-C3HC4_3 PF13920.6 BAM40074.1 - 0.38 10.6 17.3 0.057 13.3 11.6 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 BAM40074.1 - 0.96 9.5 22.1 0.039 13.9 15.4 2.1 2 0 0 2 2 2 0 zinc-RING finger domain Metallophos PF00149.28 BAM40075.1 - 6.4e-39 134.6 0.1 8.7e-39 134.1 0.1 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase STPPase_N PF16891.5 BAM40075.1 - 1.1e-19 70.5 2.6 1.1e-19 70.5 2.6 2.1 3 0 0 3 3 3 1 Serine-threonine protein phosphatase N-terminal domain ABC1 PF03109.16 BAM40076.1 - 4.2e-24 85.0 0.1 1.3e-23 83.4 0.1 1.9 1 0 0 1 1 1 1 ABC1 family Beta-lactamase PF00144.24 BAM40076.1 - 5.7e-16 58.7 0.0 2.9e-15 56.3 0.0 1.9 2 0 0 2 2 2 1 Beta-lactamase mRNA_cap_enzyme PF01331.19 BAM40077.1 - 1e-37 129.9 0.0 1.6e-37 129.2 0.0 1.3 1 0 0 1 1 1 1 mRNA capping enzyme, catalytic domain mRNA_cap_C PF03919.15 BAM40077.1 - 1.1e-16 61.4 0.0 2.5e-16 60.3 0.0 1.6 1 1 0 1 1 1 1 mRNA capping enzyme, C-terminal domain Thioredoxin_6 PF13848.6 BAM40078.1 - 1.1e-09 38.5 3.2 0.069 13.1 0.3 3.2 3 0 0 3 3 3 3 Thioredoxin-like domain Thioredoxin PF00085.20 BAM40078.1 - 1.6e-09 37.7 0.2 1.4e-05 25.1 0.1 3.8 4 1 0 4 4 4 2 Thioredoxin Thioredoxin_8 PF13905.6 BAM40078.1 - 4.9e-07 30.0 0.7 0.063 13.6 0.1 3.5 3 0 0 3 3 3 2 Thioredoxin-like Thioredoxin_2 PF13098.6 BAM40078.1 - 2.1e-05 24.9 0.1 0.094 13.2 0.1 2.5 2 0 0 2 2 2 2 Thioredoxin-like domain OST3_OST6 PF04756.13 BAM40078.1 - 0.00036 20.0 0.1 0.022 14.1 0.2 2.2 2 0 0 2 2 2 1 OST3 / OST6 family, transporter family HyaE PF07449.11 BAM40078.1 - 0.009 16.0 0.0 2.5 8.1 0.0 2.7 2 1 0 2 2 2 2 Hydrogenase-1 expression protein HyaE KaiB PF07689.12 BAM40078.1 - 0.11 12.2 0.0 0.66 9.7 0.0 2.3 3 0 0 3 3 3 0 KaiB domain FAINT PF04385.15 BAM40079.1 - 9e-21 73.7 23.4 8.1e-07 29.0 0.7 4.6 4 0 0 4 4 4 4 Domain of unknown function, DUF529 Med15 PF09606.10 BAM40079.1 - 5.1 5.6 42.2 9.7 4.7 42.2 1.4 1 0 0 1 1 1 0 ARC105 or Med15 subunit of Mediator complex non-fungal FAINT PF04385.15 BAM40080.1 - 1.5e-22 79.4 22.0 4.6e-06 26.6 0.2 5.0 4 0 0 4 4 4 4 Domain of unknown function, DUF529 Inhibitor_I53 PF11714.8 BAM40080.1 - 0.14 12.4 0.2 0.72 10.1 0.1 2.2 2 0 0 2 2 2 0 Thrombin inhibitor Madanin Abhydrolase_2 PF02230.16 BAM40081.1 - 3e-05 23.9 0.3 0.00022 21.1 0.0 2.1 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase Hydrolase_4 PF12146.8 BAM40081.1 - 5.3e-05 22.6 0.0 0.00018 20.9 0.0 1.7 1 1 0 1 1 1 1 Serine aminopeptidase, S33 LIP PF03583.14 BAM40081.1 - 0.0031 16.9 0.0 0.013 14.9 0.0 1.9 2 0 0 2 2 2 1 Secretory lipase Abhydrolase_1 PF00561.20 BAM40081.1 - 0.0087 15.7 0.0 3.6 7.1 0.0 2.2 1 1 1 2 2 2 2 alpha/beta hydrolase fold Peptidase_S9 PF00326.21 BAM40081.1 - 0.0094 15.4 0.0 0.017 14.6 0.0 1.4 1 0 0 1 1 1 1 Prolyl oligopeptidase family FSH1 PF03959.13 BAM40081.1 - 0.011 15.5 0.0 0.019 14.6 0.0 1.3 1 0 0 1 1 1 0 Serine hydrolase (FSH1) eRF1_1 PF03463.15 BAM40082.1 - 2e-30 105.4 0.2 4.7e-30 104.2 0.2 1.7 1 0 0 1 1 1 1 eRF1 domain 1 eRF1_3 PF03465.15 BAM40082.1 - 4.1e-20 72.4 0.1 1.1e-19 71.0 0.1 1.8 1 0 0 1 1 1 1 eRF1 domain 3 eRF1_2 PF03464.15 BAM40082.1 - 1e-12 48.5 0.2 3.2e-12 46.9 0.1 1.9 2 0 0 2 2 2 1 eRF1 domain 2 Autoind_synth PF00765.17 BAM40082.1 - 0.023 14.2 0.0 0.051 13.1 0.0 1.6 1 0 0 1 1 1 0 Autoinducer synthase Ribosomal_L7Ae PF01248.26 BAM40082.1 - 0.038 13.7 0.1 0.099 12.4 0.1 1.7 1 0 0 1 1 1 0 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family GerA PF03323.13 BAM40082.1 - 0.15 10.5 2.4 0.13 10.7 0.2 1.8 2 0 0 2 2 2 0 Bacillus/Clostridium GerA spore germination protein Pam16 PF03656.13 BAM40083.1 - 6.9e-09 35.8 0.0 6.9e-09 35.8 0.0 1.2 1 0 0 1 1 1 1 Pam16 DnaJ PF00226.31 BAM40083.1 - 2.1e-05 24.6 0.0 3.2e-05 24.0 0.0 1.3 1 0 0 1 1 1 1 DnaJ domain RWP-RK PF02042.15 BAM40083.1 - 0.048 13.6 0.1 0.36 10.8 0.0 2.1 2 0 0 2 2 2 0 RWP-RK domain RRP7 PF12923.7 BAM40084.1 - 1.5e-06 28.4 0.0 2.3e-06 27.7 0.0 1.4 1 0 0 1 1 1 1 Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain DUF5093 PF17011.5 BAM40084.1 - 0.00011 22.4 0.5 0.00021 21.6 0.1 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF5093) PCI PF01399.27 BAM40085.1 - 0.00048 20.6 0.0 0.014 15.9 0.0 3.0 2 2 0 2 2 2 1 PCI domain RNA_pol_Rpb4 PF03874.16 BAM40086.1 - 6.8e-15 55.5 0.7 1.6e-14 54.3 0.7 1.5 1 1 0 1 1 1 1 RNA polymerase Rpb4 Nucleoporin_FG PF13634.6 BAM40087.1 - 3e-24 85.7 222.1 3.2e-10 40.7 26.7 10.7 2 1 5 8 8 8 5 Nucleoporin FG repeat region Nsp1_C PF05064.13 BAM40087.1 - 6e-07 29.3 4.0 1.7e-06 27.8 4.0 1.7 1 0 0 1 1 1 1 Nsp1-like C-terminal region VPS53_C PF16854.5 BAM40087.1 - 0.2 11.5 3.1 0.36 10.7 3.1 1.4 1 0 0 1 1 1 0 Vacuolar protein sorting-associated protein 53 C-terminus DASH_Duo1 PF08651.10 BAM40087.1 - 0.63 9.9 6.9 2.7 7.8 0.7 2.8 2 0 0 2 2 2 0 DASH complex subunit Duo1 NPV_P10 PF05531.12 BAM40087.1 - 1.9 9.0 4.2 1.6 9.3 0.8 2.5 1 1 1 2 2 2 0 Nucleopolyhedrovirus P10 protein Lon_C PF05362.13 BAM40088.1 - 3.9e-63 212.7 0.7 5.2e-54 182.9 0.1 3.2 3 0 0 3 3 3 2 Lon protease (S16) C-terminal proteolytic domain LON_substr_bdg PF02190.16 BAM40088.1 - 4.5e-30 105.1 0.0 9.4e-30 104.0 0.0 1.6 1 0 0 1 1 1 1 ATP-dependent protease La (LON) substrate-binding domain AAA PF00004.29 BAM40088.1 - 1e-19 71.2 0.0 8.7e-19 68.3 0.0 2.5 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 BAM40088.1 - 1.8e-06 28.0 0.0 4.7e-06 26.6 0.0 1.8 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) ChlI PF13541.6 BAM40088.1 - 9.2e-06 25.5 0.1 2e-05 24.4 0.1 1.6 1 0 0 1 1 1 1 Subunit ChlI of Mg-chelatase IstB_IS21 PF01695.17 BAM40088.1 - 0.00024 20.9 0.0 0.00058 19.6 0.0 1.6 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_22 PF13401.6 BAM40088.1 - 0.00031 21.0 0.1 0.012 15.8 0.1 2.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAM40088.1 - 0.00047 20.6 0.0 0.0028 18.1 0.0 2.3 2 0 0 2 2 2 1 AAA ATPase domain AAA_2 PF07724.14 BAM40088.1 - 0.00065 19.9 0.0 0.002 18.3 0.0 1.8 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) TIP49 PF06068.13 BAM40088.1 - 0.0025 17.1 0.1 0.0025 17.1 0.1 1.9 2 0 0 2 2 2 1 TIP49 P-loop domain RuvB_N PF05496.12 BAM40088.1 - 0.0041 16.9 0.0 0.016 14.9 0.0 1.9 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain ABC_tran PF00005.27 BAM40088.1 - 0.011 16.2 0.2 1.5 9.4 0.0 2.9 2 1 0 2 2 2 0 ABC transporter AAA_18 PF13238.6 BAM40088.1 - 0.039 14.5 0.0 0.039 14.5 0.0 2.8 3 0 0 3 3 3 0 AAA domain AAA_3 PF07726.11 BAM40088.1 - 0.083 12.8 0.0 0.17 11.7 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) PhoH PF02562.16 BAM40088.1 - 0.094 12.2 0.1 0.39 10.2 0.0 1.9 2 0 0 2 2 2 0 PhoH-like protein RNA_helicase PF00910.22 BAM40088.1 - 0.1 13.0 0.0 0.4 11.1 0.0 2.1 1 0 0 1 1 1 0 RNA helicase LSM PF01423.22 BAM40091.1 - 3.8e-20 71.3 0.3 4.8e-20 71.0 0.3 1.2 1 0 0 1 1 1 1 LSM domain DUF150_C PF17384.2 BAM40091.1 - 0.045 13.9 0.0 0.069 13.3 0.0 1.3 1 0 0 1 1 1 0 RimP C-terminal SH3 domain SM-ATX PF14438.6 BAM40091.1 - 0.097 12.8 0.0 0.13 12.4 0.0 1.2 1 0 0 1 1 1 0 Ataxin 2 SM domain Diphthamide_syn PF01866.17 BAM40093.1 - 2.4e-100 335.9 0.3 3.1e-100 335.5 0.3 1.1 1 0 0 1 1 1 1 Putative diphthamide synthesis protein Sdh5 PF03937.16 BAM40094.1 - 6e-10 39.0 0.0 8.4e-10 38.5 0.0 1.2 1 0 0 1 1 1 1 Flavinator of succinate dehydrogenase YTH PF04146.15 BAM40095.1 - 4.1e-22 78.9 0.0 2.7e-20 73.0 0.0 2.1 1 1 0 1 1 1 1 YT521-B-like domain PWI PF01480.17 BAM40096.1 - 2.1e-30 104.8 0.0 3.7e-30 104.1 0.0 1.4 1 0 0 1 1 1 1 PWI domain DcpS_C PF11969.8 BAM40097.1 - 0.0056 17.2 0.0 0.016 15.7 0.0 1.6 2 0 0 2 2 2 1 Scavenger mRNA decapping enzyme C-term binding Ribosomal_L9_N PF01281.19 BAM40098.1 - 1.7e-12 46.7 0.0 3.6e-12 45.6 0.0 1.5 1 0 0 1 1 1 1 Ribosomal protein L9, N-terminal domain Ribosomal_L9_C PF03948.14 BAM40098.1 - 0.0081 16.6 0.2 0.021 15.3 0.2 1.7 1 1 0 1 1 1 1 Ribosomal protein L9, C-terminal domain N2227 PF07942.12 BAM40099.1 - 5.4e-81 271.8 0.0 1e-80 270.8 0.0 1.5 1 1 0 1 1 1 1 N2227-like protein DSPc PF00782.20 BAM40100.1 - 1.3e-11 44.4 0.1 1.3e-11 44.4 0.1 1.6 2 0 0 2 2 2 1 Dual specificity phosphatase, catalytic domain DFP PF04127.15 BAM40101.1 - 2.3e-11 43.8 0.0 1.5e-08 34.7 0.0 2.1 2 0 0 2 2 2 2 DNA / pantothenate metabolism flavoprotein Ribosomal_60s PF00428.19 BAM40102.1 - 3.2e-22 78.9 9.1 3.7e-22 78.7 9.1 1.0 1 0 0 1 1 1 1 60s Acidic ribosomal protein Mog1 PF04603.12 BAM40102.1 - 0.013 15.8 0.2 0.015 15.7 0.2 1.0 1 0 0 1 1 1 0 Ran-interacting Mog1 protein Defensin_propep PF00879.18 BAM40102.1 - 0.037 14.3 1.7 0.065 13.5 1.7 1.3 1 0 0 1 1 1 0 Defensin propeptide DUF5327 PF17261.2 BAM40102.1 - 0.075 13.8 1.9 0.083 13.6 1.9 1.4 1 1 0 1 1 1 0 Family of unknown function (DUF5327) UMP1 PF05348.11 BAM40103.1 - 6.2e-16 58.7 0.3 7.3e-16 58.5 0.3 1.1 1 0 0 1 1 1 1 Proteasome maturation factor UMP1 zf_CCCH_4 PF18345.1 BAM40104.1 - 1.7e-05 24.7 3.0 1.7e-05 24.7 3.0 1.8 2 0 0 2 2 2 1 Zinc finger domain Torus PF16131.5 BAM40104.1 - 2.5e-05 25.0 0.3 2.5e-05 25.0 0.3 2.2 1 1 1 2 2 2 1 Torus domain zf-CCCH_4 PF18044.1 BAM40104.1 - 0.00099 18.8 0.9 0.00099 18.8 0.9 2.2 3 0 0 3 3 3 1 CCCH-type zinc finger zf-CCCH PF00642.24 BAM40104.1 - 0.0098 15.8 2.7 0.11 12.4 0.5 2.4 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) UDG PF03167.19 BAM40105.1 - 8.4e-22 77.8 0.0 1.4e-21 77.1 0.0 1.3 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily RRM_1 PF00076.22 BAM40106.1 - 2.9e-37 126.3 0.2 3.8e-18 65.1 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 BAM40106.1 - 0.0036 17.3 0.0 0.033 14.2 0.0 2.1 2 0 0 2 2 2 1 Nup53/35/40-type RNA recognition motif RRM_7 PF16367.5 BAM40106.1 - 0.0062 16.6 0.0 0.21 11.7 0.0 2.4 2 0 0 2 2 2 1 RNA recognition motif OB_RNB PF08206.11 BAM40106.1 - 0.04 13.6 1.9 0.23 11.2 0.0 2.7 3 0 0 3 3 3 0 Ribonuclease B OB domain PHM7_cyt PF14703.6 BAM40106.1 - 0.053 13.8 0.0 8 6.7 0.0 2.2 2 0 0 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter PVL_ORF50 PF07768.11 BAM40107.1 - 0.51 10.7 10.4 1 9.7 5.6 3.0 2 1 1 3 3 3 0 PVL ORF-50-like family PCI PF01399.27 BAM40108.1 - 4.1e-09 36.9 2.9 2.1e-08 34.6 0.0 3.0 3 0 0 3 3 3 1 PCI domain eIF3_N PF09440.10 BAM40108.1 - 0.065 13.7 0.2 0.065 13.7 0.2 2.4 2 1 0 2 2 2 0 eIF3 subunit 6 N terminal domain RRM_1 PF00076.22 BAM40109.1 - 7.5e-25 86.5 0.1 1.8e-11 43.7 0.0 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 BAM40109.1 - 8.7e-07 28.6 0.1 0.0042 16.7 0.1 2.1 1 1 1 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 BAM40109.1 - 0.00035 20.4 0.1 0.0079 16.0 0.0 2.3 2 1 0 2 2 2 1 Occluded RNA-recognition motif DUF4145 PF13643.6 BAM40109.1 - 0.0024 18.0 0.0 0.0038 17.3 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4145) PHM7_cyt PF14703.6 BAM40109.1 - 0.0071 16.6 0.1 4.5 7.5 0.0 2.5 2 1 0 2 2 2 2 Cytosolic domain of 10TM putative phosphate transporter Pkinase PF00069.25 BAM40110.1 - 1.7e-63 214.5 0.0 2e-63 214.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM40110.1 - 5.7e-40 137.2 0.0 7.1e-40 136.9 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 BAM40110.1 - 7.5e-05 22.2 0.0 0.00012 21.5 0.0 1.4 1 0 0 1 1 1 1 Kinase-like RIO1 PF01163.22 BAM40110.1 - 0.13 11.9 0.0 0.42 10.2 0.0 1.7 2 0 0 2 2 2 0 RIO1 family DUF3943 PF13084.6 BAM40110.1 - 0.15 11.9 0.0 0.28 11.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3943) YrbL-PhoP_reg PF10707.9 BAM40110.1 - 0.16 11.5 0.0 0.23 11.0 0.0 1.3 1 0 0 1 1 1 0 PhoP regulatory network protein YrbL EF-hand_7 PF13499.6 BAM40111.1 - 9.3e-05 22.8 3.7 0.16 12.4 0.2 3.6 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_8 PF13833.6 BAM40111.1 - 0.0001 22.1 1.1 13 5.7 0.1 5.0 4 0 0 4 4 4 3 EF-hand domain pair EF-hand_6 PF13405.6 BAM40111.1 - 0.0073 16.2 0.0 1.6 8.8 0.0 3.4 2 0 0 2 2 2 1 EF-hand domain EF-hand_1 PF00036.32 BAM40111.1 - 0.038 13.5 0.1 25 4.7 0.0 3.5 3 0 0 3 3 3 0 EF hand RlmM_FDX PF18125.1 BAM40111.1 - 0.049 14.1 0.1 0.17 12.4 0.1 1.9 1 0 0 1 1 1 0 RlmM ferredoxin-like domain TruB_N PF01509.18 BAM40112.1 - 8.5e-35 120.3 0.0 1.2e-34 119.8 0.0 1.2 1 0 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 BAM40112.1 - 2.4e-06 27.6 0.0 5.1e-06 26.5 0.0 1.5 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain PseudoU_synth_2 PF00849.22 BAM40112.1 - 0.0062 16.6 0.0 0.0073 16.4 0.0 1.3 1 0 0 1 1 1 1 RNA pseudouridylate synthase LSM14 PF12701.7 BAM40114.1 - 5.4e-27 93.7 0.0 9.3e-27 92.9 0.0 1.4 1 0 0 1 1 1 1 Scd6-like Sm domain SM-ATX PF14438.6 BAM40114.1 - 6.7e-08 32.6 0.1 1.4e-07 31.6 0.1 1.5 1 0 0 1 1 1 1 Ataxin 2 SM domain ANAPC4_WD40 PF12894.7 BAM40115.1 - 3.1e-11 43.4 0.1 0.041 14.2 0.0 4.1 3 1 0 3 3 3 3 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 BAM40115.1 - 7.6e-06 26.6 7.5 0.011 16.5 0.0 6.1 6 1 0 6 6 6 2 WD domain, G-beta repeat PD40 PF07676.12 BAM40115.1 - 0.093 12.7 0.3 16 5.6 0.0 3.7 3 0 0 3 3 3 0 WD40-like Beta Propeller Repeat YCII PF03795.14 BAM40117.1 - 0.00052 20.4 0.0 0.13 12.6 0.0 2.6 2 0 0 2 2 2 2 YCII-related domain ABC_tran PF00005.27 BAM40119.1 - 4.3e-31 108.3 0.0 2.5e-15 57.2 0.0 2.6 2 1 0 2 2 2 2 ABC transporter AAA_29 PF13555.6 BAM40119.1 - 3.9e-06 26.5 0.3 0.062 13.1 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 BAM40119.1 - 2.8e-05 24.1 0.5 0.041 13.8 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase AAA_21 PF13304.6 BAM40119.1 - 6.6e-05 22.9 1.5 0.41 10.4 0.2 3.6 4 0 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system Zeta_toxin PF06414.12 BAM40119.1 - 6.9e-05 22.2 0.3 0.062 12.6 0.0 2.3 2 0 0 2 2 2 2 Zeta toxin AAA_16 PF13191.6 BAM40119.1 - 9.4e-05 22.9 0.0 0.05 14.0 0.0 2.4 2 0 0 2 2 2 1 AAA ATPase domain MeaB PF03308.16 BAM40119.1 - 0.00013 21.1 0.3 0.023 13.7 0.1 2.2 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB FtsK_SpoIIIE PF01580.18 BAM40119.1 - 0.00026 20.4 0.1 0.19 11.1 0.0 2.3 2 0 0 2 2 2 2 FtsK/SpoIIIE family AAA_30 PF13604.6 BAM40119.1 - 0.00056 19.7 0.0 0.046 13.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 BAM40119.1 - 0.00065 20.3 1.5 0.47 10.9 0.2 2.6 2 0 0 2 2 2 2 AAA domain T2SSE PF00437.20 BAM40119.1 - 0.001 18.2 0.0 0.12 11.4 0.0 2.2 2 0 0 2 2 2 1 Type II/IV secretion system protein TrwB_AAD_bind PF10412.9 BAM40119.1 - 0.001 18.0 1.3 0.82 8.5 0.0 2.2 2 0 0 2 2 2 2 Type IV secretion-system coupling protein DNA-binding domain AAA_18 PF13238.6 BAM40119.1 - 0.0017 18.9 0.2 1.9 9.0 0.1 2.7 2 0 0 2 2 2 1 AAA domain ATP_bind_1 PF03029.17 BAM40119.1 - 0.0019 18.1 0.4 1.6 8.4 0.1 2.6 2 0 0 2 2 2 2 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 BAM40119.1 - 0.0047 17.2 0.3 1.8 8.8 0.0 2.8 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 BAM40119.1 - 0.0049 16.9 0.4 0.77 9.9 0.1 2.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase KAP_NTPase PF07693.14 BAM40119.1 - 0.005 16.1 0.0 0.55 9.4 0.0 2.4 2 0 0 2 2 2 1 KAP family P-loop domain DUF87 PF01935.17 BAM40119.1 - 0.0057 16.8 5.1 0.056 13.5 0.3 2.6 2 0 0 2 2 2 1 Helicase HerA, central domain MobB PF03205.14 BAM40119.1 - 0.0089 15.9 0.7 0.64 9.9 0.2 2.4 2 0 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B cobW PF02492.19 BAM40119.1 - 0.016 14.8 1.5 0.94 9.0 0.1 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain ATPase_2 PF01637.18 BAM40119.1 - 0.018 15.0 0.2 7.1 6.5 0.0 2.5 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_25 PF13481.6 BAM40119.1 - 0.02 14.5 0.0 2.3 7.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 BAM40119.1 - 0.024 14.6 0.4 3.2 7.6 0.1 2.8 3 0 0 3 3 3 0 NACHT domain SMC_N PF02463.19 BAM40119.1 - 0.031 13.7 3.3 0.22 10.9 0.5 2.5 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_19 PF13245.6 BAM40119.1 - 0.15 12.4 0.7 10 6.5 0.1 2.3 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 BAM40119.1 - 0.21 11.5 0.8 19 5.1 0.1 2.4 2 0 0 2 2 2 0 NTPase NB-ARC PF00931.22 BAM40119.1 - 0.22 10.7 2.1 0.33 10.1 0.1 2.2 2 0 0 2 2 2 0 NB-ARC domain DUF815 PF05673.13 BAM40119.1 - 0.22 10.6 0.5 2 7.5 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_33 PF13671.6 BAM40119.1 - 0.29 11.3 0.8 23 5.1 0.1 2.4 2 0 0 2 2 2 0 AAA domain PRP21_like_P PF12230.8 BAM40120.1 - 1.8e-42 145.6 3.4 3.6e-42 144.7 3.4 1.4 1 0 0 1 1 1 1 Pre-mRNA splicing factor PRP21 like protein Surp PF01805.20 BAM40120.1 - 6.3e-35 119.0 5.3 4.2e-17 61.9 0.4 2.4 2 0 0 2 2 2 2 Surp module DUF1682 PF07946.14 BAM40120.1 - 0.03 13.5 1.3 0.051 12.8 1.3 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1682) DUF3340 PF11818.8 BAM40120.1 - 3.5 7.8 9.6 0.46 10.6 0.3 3.0 4 0 0 4 4 4 0 C-terminal domain of tail specific protease (DUF3340) ABC_tran PF00005.27 BAM40121.1 - 2.2e-32 112.4 0.0 1.4e-16 61.2 0.0 2.7 2 1 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 BAM40121.1 - 8.2e-08 32.2 23.9 8.2e-08 32.2 23.9 3.9 3 1 0 3 3 2 1 ABC transporter transmembrane region AAA_29 PF13555.6 BAM40121.1 - 5.6e-06 26.0 0.3 0.061 13.1 0.0 2.7 2 0 0 2 2 2 2 P-loop containing region of AAA domain MeaB PF03308.16 BAM40121.1 - 2e-05 23.7 0.5 0.003 16.6 0.1 2.2 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB Zeta_toxin PF06414.12 BAM40121.1 - 6.2e-05 22.4 0.4 0.052 12.8 0.0 2.2 2 0 0 2 2 2 2 Zeta toxin RsgA_GTPase PF03193.16 BAM40121.1 - 9.1e-05 22.4 0.7 0.099 12.5 0.1 2.3 2 0 0 2 2 2 2 RsgA GTPase T2SSE PF00437.20 BAM40121.1 - 0.00016 20.8 0.3 0.018 14.1 0.1 2.2 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_30 PF13604.6 BAM40121.1 - 0.00023 20.9 0.1 0.019 14.7 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_21 PF13304.6 BAM40121.1 - 0.00084 19.2 3.2 1.2 8.8 0.1 3.5 4 0 0 4 4 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 BAM40121.1 - 0.0012 19.4 0.9 1.3 9.4 0.1 2.7 2 0 0 2 2 2 2 AAA domain FtsK_SpoIIIE PF01580.18 BAM40121.1 - 0.0013 18.2 0.1 0.19 11.1 0.0 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_16 PF13191.6 BAM40121.1 - 0.0014 19.0 0.0 0.77 10.1 0.0 2.4 2 0 0 2 2 2 1 AAA ATPase domain TrwB_AAD_bind PF10412.9 BAM40121.1 - 0.0076 15.2 0.7 0.81 8.5 0.0 2.3 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain ATP_bind_1 PF03029.17 BAM40121.1 - 0.013 15.3 4.3 1.6 8.5 0.1 3.0 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein MMR_HSR1 PF01926.23 BAM40121.1 - 0.015 15.4 0.1 3.6 7.7 0.0 3.0 3 0 0 3 3 2 0 50S ribosome-binding GTPase ATPase_2 PF01637.18 BAM40121.1 - 0.02 14.8 0.4 7.2 6.4 0.1 2.5 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea SMC_N PF02463.19 BAM40121.1 - 0.022 14.2 3.0 0.22 10.9 0.5 2.6 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain cobW PF02492.19 BAM40121.1 - 0.023 14.3 1.5 1.3 8.5 0.1 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain MobB PF03205.14 BAM40121.1 - 0.027 14.4 0.7 1.7 8.5 0.3 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_22 PF13401.6 BAM40121.1 - 0.043 14.1 0.2 16 5.8 0.0 2.8 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 BAM40121.1 - 0.065 12.8 0.0 2.3 7.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 BAM40121.1 - 0.071 13.0 0.9 4.1 7.3 0.1 2.5 2 0 0 2 2 2 0 NACHT domain AAA_33 PF13671.6 BAM40121.1 - 0.077 13.2 0.5 14 5.8 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.7 BAM40121.1 - 0.08 11.8 0.4 2.6 6.9 0.1 2.2 2 0 0 2 2 2 0 AAA-like domain AAA_18 PF13238.6 BAM40121.1 - 0.1 13.2 0.2 8.9 6.9 0.0 2.4 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 BAM40121.1 - 0.11 11.7 2.5 0.089 12.0 0.2 1.9 2 0 0 2 2 2 0 NB-ARC domain DnaB_C PF03796.15 BAM40121.1 - 0.14 11.5 0.0 15 4.8 0.0 2.4 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain DUF87 PF01935.17 BAM40121.1 - 0.14 12.2 5.1 1.1 9.2 0.3 2.5 2 0 0 2 2 2 0 Helicase HerA, central domain NTPase_1 PF03266.15 BAM40121.1 - 0.23 11.4 1.7 12 5.8 0.2 2.4 2 0 0 2 2 2 0 NTPase ABC_tran PF00005.27 BAM40122.1 - 2.7e-33 115.4 0.0 1.9e-17 64.0 0.0 2.7 2 1 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 BAM40122.1 - 3.3e-10 40.1 16.4 3.3e-10 40.1 16.4 3.4 2 2 1 3 3 2 1 ABC transporter transmembrane region AAA_29 PF13555.6 BAM40122.1 - 5.9e-06 25.9 1.2 0.062 13.1 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 BAM40122.1 - 1.5e-05 25.0 2.0 0.0085 16.0 0.3 2.4 2 0 0 2 2 2 2 RsgA GTPase AAA_16 PF13191.6 BAM40122.1 - 3.6e-05 24.2 0.0 0.02 15.3 0.0 2.4 2 0 0 2 2 2 1 AAA ATPase domain T2SSE PF00437.20 BAM40122.1 - 5e-05 22.5 0.2 0.0065 15.6 0.1 2.3 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_30 PF13604.6 BAM40122.1 - 5.1e-05 23.1 0.2 0.0039 16.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain MeaB PF03308.16 BAM40122.1 - 8.4e-05 21.7 0.5 0.015 14.3 0.1 2.2 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB FtsK_SpoIIIE PF01580.18 BAM40122.1 - 0.00017 21.0 0.1 0.19 11.1 0.0 2.9 3 0 0 3 3 3 2 FtsK/SpoIIIE family Zeta_toxin PF06414.12 BAM40122.1 - 0.00022 20.6 0.6 0.18 11.0 0.1 2.4 2 0 0 2 2 2 2 Zeta toxin AAA_22 PF13401.6 BAM40122.1 - 0.00045 20.5 0.3 0.15 12.3 0.0 2.8 2 0 0 2 2 2 1 AAA domain TrwB_AAD_bind PF10412.9 BAM40122.1 - 0.00076 18.5 1.1 0.82 8.5 0.0 2.2 2 0 0 2 2 2 2 Type IV secretion-system coupling protein DNA-binding domain AAA_18 PF13238.6 BAM40122.1 - 0.0017 18.9 0.0 1.6 9.3 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 BAM40122.1 - 0.0039 17.7 5.4 0.65 10.5 1.2 3.0 2 1 1 3 3 3 1 AAA domain MMR_HSR1 PF01926.23 BAM40122.1 - 0.006 16.7 0.5 0.82 9.8 0.1 2.6 2 0 0 2 2 2 1 50S ribosome-binding GTPase MobB PF03205.14 BAM40122.1 - 0.011 15.6 2.0 0.72 9.8 0.4 2.9 3 0 0 3 3 3 0 Molybdopterin guanine dinucleotide synthesis protein B ATPase_2 PF01637.18 BAM40122.1 - 0.013 15.5 0.5 5.2 6.9 0.1 2.7 3 0 0 3 3 2 0 ATPase domain predominantly from Archaea ATP_bind_1 PF03029.17 BAM40122.1 - 0.013 15.3 5.2 1.6 8.4 0.1 3.1 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein cobW PF02492.19 BAM40122.1 - 0.013 15.1 1.8 0.65 9.6 0.1 2.4 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_10 PF12846.7 BAM40122.1 - 0.017 14.1 0.4 2.6 6.9 0.1 2.2 2 0 0 2 2 2 0 AAA-like domain DUF815 PF05673.13 BAM40122.1 - 0.018 14.2 0.2 2 7.5 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF815) NACHT PF05729.12 BAM40122.1 - 0.024 14.6 1.8 1.9 8.4 0.1 3.1 3 0 0 3 3 3 0 NACHT domain AAA_21 PF13304.6 BAM40122.1 - 0.04 13.7 11.8 0.24 11.2 0.4 3.7 5 0 0 5 5 3 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_25 PF13481.6 BAM40122.1 - 0.044 13.3 0.0 2.3 7.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 BAM40122.1 - 0.046 12.9 2.3 0.053 12.7 0.1 2.1 2 0 0 2 2 2 0 NB-ARC domain SMC_N PF02463.19 BAM40122.1 - 0.047 13.1 4.0 0.23 10.9 0.5 2.4 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_24 PF13479.6 BAM40122.1 - 0.063 13.0 0.3 9.1 5.9 0.0 2.5 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 BAM40122.1 - 0.072 12.5 0.4 0.27 10.7 0.1 1.9 2 0 0 2 2 2 0 PhoH-like protein RNA_helicase PF00910.22 BAM40122.1 - 0.08 13.3 0.1 21 5.6 0.0 2.8 2 0 0 2 2 2 0 RNA helicase Mg_chelatase PF01078.21 BAM40122.1 - 0.1 12.0 0.2 0.4 10.0 0.0 2.0 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI DUF87 PF01935.17 BAM40122.1 - 0.12 12.4 9.1 0.099 12.7 0.6 2.7 3 0 0 3 3 2 0 Helicase HerA, central domain AAA_7 PF12775.7 BAM40122.1 - 0.12 11.8 1.9 13 5.2 0.2 2.7 2 0 0 2 2 2 0 P-loop containing dynein motor region PIF1 PF05970.14 BAM40122.1 - 0.13 11.4 0.9 0.17 11.0 0.1 1.6 2 0 0 2 2 1 0 PIF1-like helicase AAA_5 PF07728.14 BAM40122.1 - 0.2 11.7 0.2 32 4.5 0.1 2.6 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 BAM40122.1 - 0.24 11.3 1.9 12 5.7 0.2 2.5 2 0 0 2 2 2 0 NTPase AAA_33 PF13671.6 BAM40122.1 - 0.28 11.4 0.6 23 5.1 0.1 2.6 2 0 0 2 2 2 0 AAA domain AAA_19 PF13245.6 BAM40122.1 - 0.28 11.5 1.0 16 5.8 0.1 2.4 2 0 0 2 2 2 0 AAA domain Dynamin_N PF00350.23 BAM40122.1 - 0.46 10.5 2.1 2.2 8.3 0.3 2.5 2 0 0 2 2 2 0 Dynamin family Ribosomal_L20 PF00453.18 BAM40123.1 - 9e-20 70.8 1.6 1.4e-19 70.1 1.6 1.3 1 0 0 1 1 1 1 Ribosomal protein L20 Sec62 PF03839.16 BAM40124.1 - 3.4e-22 79.0 2.7 5.4e-22 78.4 2.7 1.3 1 0 0 1 1 1 1 Translocation protein Sec62 DUF5409 PF17421.2 BAM40124.1 - 1.4 9.7 5.4 49 4.7 0.0 2.3 1 1 1 2 2 2 0 Family of unknown function (DUF5409) ubiquitin PF00240.23 BAM40125.1 - 1.5e-10 40.6 11.4 0.00011 21.9 0.9 3.3 2 1 1 3 3 3 3 Ubiquitin family Colicin-DNase PF12639.7 BAM40125.1 - 0.21 12.4 4.0 1.3 9.9 0.8 2.2 2 0 0 2 2 2 0 DNase/tRNase domain of colicin-like bacteriocin TRAM_LAG1_CLN8 PF03798.16 BAM40126.1 - 1.5e-28 99.9 25.2 1.5e-28 99.9 25.2 1.5 2 0 0 2 2 2 1 TLC domain Cytochrom_C PF00034.21 BAM40127.1 - 9.3e-15 55.5 0.0 1.3e-14 55.1 0.0 1.2 1 0 0 1 1 1 1 Cytochrome c Cytochrome_CBB3 PF13442.6 BAM40127.1 - 6e-07 29.7 1.6 2.2e-06 27.9 1.6 1.8 1 1 0 1 1 1 1 Cytochrome C oxidase, cbb3-type, subunit III Cytochrom_C550 PF14495.6 BAM40127.1 - 0.002 17.8 0.1 0.004 16.9 0.1 1.5 1 0 0 1 1 1 1 Cytochrome c-550 domain Cytochrome-c551 PF10643.9 BAM40127.1 - 0.007 16.0 0.0 0.0097 15.5 0.0 1.2 1 0 0 1 1 1 1 Photosystem P840 reaction-centre cytochrome c-551 Cytochrome_P460 PF16694.5 BAM40127.1 - 0.17 12.3 0.7 0.69 10.3 0.4 1.9 1 1 1 2 2 2 0 Cytochrome P460 HOIP-UBA PF16678.5 BAM40129.1 - 0.062 13.3 0.1 0.12 12.4 0.1 1.4 1 0 0 1 1 1 0 HOIP UBA domain pair APG5 PF04106.12 BAM40129.1 - 0.064 12.8 0.0 0.12 11.9 0.0 1.5 1 0 0 1 1 1 0 Autophagy protein Apg5 Fes1 PF08609.10 BAM40129.1 - 1.2 10.0 7.6 0.37 11.7 3.8 2.3 2 1 0 2 2 2 0 Nucleotide exchange factor Fes1 Pkinase PF00069.25 BAM40130.1 - 1.6e-79 267.0 0.1 3e-79 266.1 0.1 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM40130.1 - 3.6e-39 134.6 0.0 6.1e-39 133.9 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 BAM40130.1 - 1.4e-25 89.5 4.1 1.8e-14 53.9 1.2 3.1 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 BAM40130.1 - 7.5e-24 81.5 2.7 6e-06 25.4 0.1 4.6 4 0 0 4 4 4 4 EF hand EF-hand_5 PF13202.6 BAM40130.1 - 3.5e-19 67.4 3.1 7.8e-05 22.0 0.1 4.5 4 0 0 4 4 4 4 EF hand EF-hand_6 PF13405.6 BAM40130.1 - 1.4e-18 65.2 1.1 0.00011 21.8 0.1 4.8 4 0 0 4 4 4 4 EF-hand domain EF-hand_8 PF13833.6 BAM40130.1 - 1.2e-16 60.3 3.8 3.8e-08 33.0 0.8 4.7 4 1 1 5 5 5 4 EF-hand domain pair EF-hand_4 PF12763.7 BAM40130.1 - 0.00022 21.1 1.0 0.46 10.5 0.0 3.2 2 1 1 3 3 3 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 BAM40130.1 - 0.00024 21.4 1.8 1.4 9.3 0.0 4.1 3 1 0 3 3 3 2 Secreted protein acidic and rich in cysteine Ca binding region Kdo PF06293.14 BAM40130.1 - 0.003 16.9 0.0 0.0065 15.8 0.0 1.5 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pox_ser-thr_kin PF05445.11 BAM40130.1 - 0.0098 14.9 0.7 0.018 14.0 0.7 1.4 1 0 0 1 1 1 1 Poxvirus serine/threonine protein kinase EF-hand_9 PF14658.6 BAM40130.1 - 0.015 15.6 0.6 2.6 8.5 0.0 3.0 3 0 0 3 3 3 0 EF-hand domain APH PF01636.23 BAM40130.1 - 0.019 14.9 0.0 0.3 11.0 0.0 2.2 1 1 0 2 2 2 0 Phosphotransferase enzyme family HHH_2 PF12826.7 BAM40130.1 - 0.18 11.9 0.0 34 4.6 0.0 3.2 2 1 0 2 2 2 0 Helix-hairpin-helix motif YrbL-PhoP_reg PF10707.9 BAM40130.1 - 0.19 11.3 3.5 2.5 7.6 0.0 3.2 2 1 1 3 3 3 0 PhoP regulatory network protein YrbL Oxysterol_BP PF01237.18 BAM40132.1 - 9.7e-116 386.6 11.2 9.2e-71 238.6 0.1 2.7 1 1 1 2 2 2 2 Oxysterol-binding protein AAA_16 PF13191.6 BAM40133.1 - 1.3e-05 25.7 0.0 4.5e-05 23.9 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 BAM40133.1 - 0.00014 22.1 0.0 0.00032 21.0 0.0 1.7 1 1 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 BAM40133.1 - 0.00057 19.9 0.2 0.001 19.1 0.2 1.5 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA PF00004.29 BAM40133.1 - 0.001 19.5 0.0 0.0045 17.4 0.0 2.0 1 1 1 2 2 2 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 BAM40133.1 - 0.0016 18.4 0.0 0.0031 17.5 0.0 1.5 1 0 0 1 1 1 1 NACHT domain T2SSE PF00437.20 BAM40133.1 - 0.069 12.2 0.0 0.13 11.3 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein Myb_DNA-binding PF00249.31 BAM40135.1 - 9.8e-08 32.1 0.6 2.5e-07 30.7 0.6 1.7 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 BAM40135.1 - 5.8e-05 23.3 0.4 0.00028 21.1 0.4 2.3 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_7 PF15963.5 BAM40135.1 - 0.0024 17.7 0.9 0.0085 16.0 0.9 1.9 1 0 0 1 1 1 1 Myb DNA-binding like Ribosomal_S27 PF01599.19 BAM40135.1 - 0.19 11.9 0.9 0.51 10.5 0.9 1.7 1 0 0 1 1 1 0 Ribosomal protein S27a YkyA PF10368.9 BAM40135.1 - 3.6 7.2 10.4 7.2 6.2 0.5 2.3 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein Aha1_N PF09229.11 BAM40136.1 - 6.9e-23 81.4 4.7 6.9e-23 81.4 4.7 2.3 2 0 0 2 2 2 1 Activator of Hsp90 ATPase, N-terminal TPR_2 PF07719.17 BAM40136.1 - 7.9e-10 38.1 2.8 2.2e-05 24.2 0.2 3.9 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 BAM40136.1 - 5.3e-09 35.5 9.7 1.4e-05 24.7 0.3 4.3 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 BAM40136.1 - 2.2e-06 28.0 0.1 5.2e-06 26.9 0.1 1.7 1 0 0 1 1 1 1 Tetratricopeptide repeat TPR_8 PF13181.6 BAM40136.1 - 0.00056 19.9 0.1 0.00056 19.9 0.1 3.7 4 1 0 4 4 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 BAM40136.1 - 0.0008 20.0 0.0 0.0042 17.7 0.0 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 BAM40136.1 - 0.0012 18.5 3.8 2.4 7.9 0.6 3.4 2 1 1 3 3 3 3 TPR repeat Fis1_TPR_C PF14853.6 BAM40136.1 - 0.0034 17.4 1.0 0.0097 16.0 0.2 2.2 2 0 0 2 2 2 1 Fis1 C-terminal tetratricopeptide repeat TPR_17 PF13431.6 BAM40136.1 - 0.012 16.0 0.6 0.012 16.0 0.6 2.9 3 0 0 3 3 2 0 Tetratricopeptide repeat TPR_12 PF13424.6 BAM40136.1 - 0.018 15.3 0.1 3.5 8.0 0.0 3.1 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_20 PF14561.6 BAM40136.1 - 0.026 14.8 1.1 0.15 12.4 1.1 2.3 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_14 PF13428.6 BAM40136.1 - 0.034 15.0 0.0 0.093 13.6 0.0 1.7 1 0 0 1 1 1 0 Tetratricopeptide repeat ANAPC3 PF12895.7 BAM40136.1 - 0.038 14.2 3.0 0.22 11.8 0.7 2.4 2 0 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 TPR_9 PF13371.6 BAM40136.1 - 0.043 14.0 0.0 0.07 13.3 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat DUF357 PF04010.13 BAM40136.1 - 1 9.4 3.7 5.8 7.1 0.2 3.6 5 0 0 5 5 3 0 Protein of unknown function (DUF357) RCC1 PF00415.18 BAM40137.1 - 2.6e-17 63.2 2.4 2.9e-08 34.2 0.0 4.7 6 0 0 6 6 6 2 Regulator of chromosome condensation (RCC1) repeat IQ PF00612.27 BAM40137.1 - 1.1e-13 49.6 34.8 4.2e-05 23.0 0.0 8.8 9 0 0 9 9 9 5 IQ calmodulin-binding motif RCC1_2 PF13540.6 BAM40137.1 - 2e-13 49.7 7.3 3.1e-09 36.4 0.1 3.6 3 0 0 3 3 3 2 Regulator of chromosome condensation (RCC1) repeat CLAMP PF14769.6 BAM40137.1 - 0.18 12.3 5.7 0.065 13.7 0.8 3.1 3 0 0 3 3 3 0 Flagellar C1a complex subunit C1a-32 RPW8 PF05659.11 BAM40137.1 - 5.3 6.7 6.0 6.1 6.5 0.1 3.2 3 0 0 3 3 3 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 CwfJ_C_2 PF04676.14 BAM40138.1 - 1.5e-15 57.9 0.0 3.9e-15 56.5 0.0 1.8 1 0 0 1 1 1 1 Protein similar to CwfJ C-terminus 2 CwfJ_C_1 PF04677.15 BAM40138.1 - 1.6e-13 50.6 1.4 4.7e-11 42.6 1.3 2.2 2 0 0 2 2 2 2 Protein similar to CwfJ C-terminus 1 Ribo_biogen_C PF04034.13 BAM40139.1 - 1.6e-46 157.2 0.0 2.2e-46 156.7 0.0 1.2 1 0 0 1 1 1 1 Ribosome biogenesis protein, C-terminal RLI PF04068.15 BAM40139.1 - 5.7e-11 42.0 0.0 9.6e-11 41.3 0.0 1.4 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI PAS_8 PF13188.7 BAM40139.1 - 0.15 12.1 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 PAS domain PsaF PF17550.2 BAM40139.1 - 0.17 11.4 0.0 0.31 10.6 0.0 1.4 1 0 0 1 1 1 0 Family of unknown function WD40 PF00400.32 BAM40140.1 - 8.5e-27 92.9 8.5 3.8e-06 27.5 0.5 6.8 7 0 0 7 7 7 5 WD domain, G-beta repeat eIF2A PF08662.11 BAM40140.1 - 0.00047 20.1 1.1 0.099 12.5 0.1 3.4 2 1 1 3 3 3 1 Eukaryotic translation initiation factor eIF2A PQQ_2 PF13360.6 BAM40140.1 - 0.072 12.7 0.0 0.63 9.6 0.0 2.4 1 1 0 1 1 1 0 PQQ-like domain Carb_anhydrase PF00194.21 BAM40142.1 - 7.9e-21 74.7 5.8 4.5e-16 59.2 0.1 3.4 3 1 0 3 3 3 2 Eukaryotic-type carbonic anhydrase CTNNBL PF08216.11 BAM40143.1 - 4.9e-23 81.3 2.2 5.8e-23 81.0 0.0 2.3 2 1 1 3 3 3 1 Catenin-beta-like, Arm-motif containing nuclear GAT PF03127.14 BAM40143.1 - 0.027 14.8 2.9 0.095 13.0 1.1 2.8 2 1 0 2 2 2 0 GAT domain Arm PF00514.23 BAM40143.1 - 0.083 13.0 0.0 3.3 7.9 0.0 2.8 2 0 0 2 2 2 0 Armadillo/beta-catenin-like repeat YkuI_C PF10388.9 BAM40143.1 - 0.11 12.3 2.0 0.29 10.9 2.0 1.7 1 0 0 1 1 1 0 EAL-domain associated signalling protein domain DnaJ PF00226.31 BAM40144.1 - 5.5e-11 42.4 0.1 1.8e-10 40.8 0.1 1.9 1 0 0 1 1 1 1 DnaJ domain TPR_1 PF00515.28 BAM40144.1 - 1.2e-06 28.0 3.0 0.00019 21.1 0.1 2.9 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_2 PF07719.17 BAM40144.1 - 3.2e-06 26.8 2.6 0.008 16.2 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 BAM40144.1 - 0.0013 19.0 0.6 0.48 10.7 0.1 2.6 2 0 0 2 2 2 2 Tetratricopeptide repeat zf-AD PF07776.15 BAM40144.1 - 0.025 14.8 2.3 3.8 7.8 0.2 3.3 2 0 0 2 2 2 0 Zinc-finger associated domain (zf-AD) MIT PF04212.18 BAM40144.1 - 0.026 14.6 0.1 0.11 12.6 0.1 2.1 1 0 0 1 1 1 0 MIT (microtubule interacting and transport) domain TPR_7 PF13176.6 BAM40144.1 - 0.035 14.1 2.2 0.95 9.6 0.0 3.4 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_8 PF13181.6 BAM40144.1 - 0.058 13.6 1.2 17 5.9 0.1 3.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TMF_DNA_bd PF12329.8 BAM40144.1 - 1.2 9.1 6.5 0.91 9.6 3.5 2.4 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Clat_adaptor_s PF01217.20 BAM40146.1 - 2.4e-38 131.3 0.8 2.6e-38 131.2 0.8 1.0 1 0 0 1 1 1 1 Clathrin adaptor complex small chain DUF501 PF04417.12 BAM40150.1 - 1.9e-14 53.6 0.0 2.2e-09 37.3 0.0 2.6 2 0 0 2 2 2 2 Protein of unknown function (DUF501) DUF4125 PF13526.6 BAM40150.1 - 0.026 14.1 0.5 0.39 10.3 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF4125) NDK PF00334.19 BAM40151.1 - 8e-51 171.6 0.0 9.1e-51 171.4 0.0 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase SRP54 PF00448.22 BAM40152.1 - 1.2e-54 184.9 0.1 2.5e-54 183.9 0.1 1.5 1 1 0 1 1 1 1 SRP54-type protein, GTPase domain SRP-alpha_N PF04086.13 BAM40152.1 - 3e-07 30.7 8.6 0.0066 16.4 5.2 2.3 1 1 1 2 2 2 2 Signal recognition particle, alpha subunit, N-terminal CbiA PF01656.23 BAM40152.1 - 9.2e-06 25.7 1.2 0.00016 21.7 1.2 2.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain SRP54_N PF02881.19 BAM40152.1 - 6.3e-05 23.1 0.1 0.00039 20.6 0.1 2.4 1 0 0 1 1 1 1 SRP54-type protein, helical bundle domain AAA_30 PF13604.6 BAM40152.1 - 0.00011 22.0 0.0 0.0002 21.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 BAM40152.1 - 0.00021 21.3 0.1 0.16 11.9 0.0 3.0 3 0 0 3 3 3 1 NTPase MeaB PF03308.16 BAM40152.1 - 0.00065 18.8 0.0 0.0023 17.0 0.0 1.8 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_22 PF13401.6 BAM40152.1 - 0.003 17.8 0.0 0.055 13.7 0.0 2.6 2 1 1 3 3 3 1 AAA domain AAA_16 PF13191.6 BAM40152.1 - 0.0067 16.8 0.0 0.017 15.5 0.0 1.8 1 1 0 1 1 1 1 AAA ATPase domain AAA_31 PF13614.6 BAM40152.1 - 0.016 15.1 0.1 0.068 13.1 0.1 1.9 1 1 0 1 1 1 0 AAA domain DAP3 PF10236.9 BAM40152.1 - 0.02 14.0 0.0 0.033 13.4 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 AAA_24 PF13479.6 BAM40152.1 - 0.029 14.1 0.0 0.09 12.5 0.0 1.8 1 0 0 1 1 1 0 AAA domain ArsA_ATPase PF02374.15 BAM40152.1 - 0.058 12.6 0.1 1.2 8.3 0.1 2.3 2 0 0 2 2 2 0 Anion-transporting ATPase Fer4_NifH PF00142.18 BAM40152.1 - 0.08 12.4 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family AAA_17 PF13207.6 BAM40152.1 - 0.086 13.3 0.0 0.22 11.9 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 BAM40152.1 - 0.13 12.7 0.1 0.45 10.9 0.0 2.0 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) SUI1 PF01253.22 BAM40156.1 - 4.8e-18 65.4 0.2 7.5e-18 64.8 0.2 1.2 1 0 0 1 1 1 1 Translation initiation factor SUI1 Peptidase_M41 PF01434.18 BAM40157.1 - 1.5e-60 204.3 0.0 2.2e-60 203.8 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 BAM40157.1 - 1e-41 142.5 0.0 2e-41 141.5 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 BAM40157.1 - 4.6e-12 45.5 0.1 1.2e-11 44.2 0.1 1.7 1 0 0 1 1 1 1 AAA+ lid domain AAA_5 PF07728.14 BAM40157.1 - 7.1e-05 22.8 0.0 0.00027 21.0 0.0 2.0 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 BAM40157.1 - 0.00014 22.1 0.5 0.036 14.3 0.1 2.8 2 1 0 3 3 2 1 AAA domain TIP49 PF06068.13 BAM40157.1 - 0.00035 19.9 0.0 0.00064 19.0 0.0 1.4 1 0 0 1 1 1 1 TIP49 P-loop domain RuvB_N PF05496.12 BAM40157.1 - 0.00091 19.0 0.0 0.002 17.9 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_17 PF13207.6 BAM40157.1 - 0.0012 19.3 0.0 0.0024 18.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_2 PF07724.14 BAM40157.1 - 0.0048 17.0 0.0 0.027 14.6 0.0 2.2 2 1 0 2 2 1 1 AAA domain (Cdc48 subfamily) Mg_chelatase PF01078.21 BAM40157.1 - 0.0054 16.1 0.1 0.027 13.9 0.1 2.1 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI FtsH_ext PF06480.15 BAM40157.1 - 0.0099 16.2 0.1 0.18 12.2 0.0 2.9 2 1 0 2 2 2 1 FtsH Extracellular AAA_18 PF13238.6 BAM40157.1 - 0.015 15.8 0.1 0.051 14.1 0.0 2.0 2 0 0 2 2 1 0 AAA domain AAA_16 PF13191.6 BAM40157.1 - 0.017 15.5 0.1 0.17 12.3 0.1 2.3 1 1 0 2 2 2 0 AAA ATPase domain AAA_33 PF13671.6 BAM40157.1 - 0.019 15.1 0.0 0.04 14.1 0.0 1.5 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 BAM40157.1 - 0.029 14.1 0.2 0.063 13.0 0.2 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_28 PF13521.6 BAM40157.1 - 0.043 14.1 0.1 0.17 12.2 0.0 2.0 2 0 0 2 2 2 0 AAA domain Zeta_toxin PF06414.12 BAM40157.1 - 0.066 12.5 0.1 0.14 11.4 0.1 1.5 1 0 0 1 1 1 0 Zeta toxin DUF4918 PF16265.5 BAM40157.1 - 0.075 12.5 0.6 6.9 6.1 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4918) DUF4834 PF16118.5 BAM40157.1 - 0.16 13.0 0.4 0.47 11.5 0.4 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4834) DEAD PF00270.29 BAM40158.1 - 8.4e-29 100.6 0.0 4.1e-28 98.3 0.0 2.3 2 1 0 2 2 2 1 DEAD/DEAH box helicase DUF4217 PF13959.6 BAM40158.1 - 1.2e-15 57.5 0.1 2.8e-15 56.3 0.1 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) Helicase_C PF00271.31 BAM40158.1 - 9.6e-10 38.8 0.1 5.4e-09 36.4 0.0 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM40158.1 - 0.03 14.3 1.0 0.16 12.0 0.1 2.7 2 2 1 3 3 3 0 Type III restriction enzyme, res subunit AAA_22 PF13401.6 BAM40158.1 - 0.036 14.4 0.2 0.65 10.3 0.2 2.7 1 1 0 1 1 1 0 AAA domain ThiF PF00899.21 BAM40160.1 - 1.4e-46 158.9 0.8 1.8e-46 158.5 0.8 1.1 1 0 0 1 1 1 1 ThiF family NAD_binding_7 PF13241.6 BAM40160.1 - 0.0015 18.9 0.2 0.0042 17.5 0.2 1.7 1 1 0 1 1 1 1 Putative NAD(P)-binding Sacchrp_dh_NADP PF03435.18 BAM40160.1 - 0.0047 17.2 2.8 0.029 14.6 2.8 2.1 1 1 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 BAM40160.1 - 0.0067 15.8 0.0 0.012 15.0 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain UDPG_MGDP_dh_N PF03721.14 BAM40160.1 - 0.022 14.4 0.1 0.044 13.4 0.1 1.5 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PglD_N PF17836.1 BAM40160.1 - 0.022 15.4 0.0 0.045 14.4 0.0 1.6 1 0 0 1 1 1 0 PglD N-terminal domain FAD_binding_3 PF01494.19 BAM40160.1 - 0.029 13.6 1.3 0.061 12.6 1.2 1.6 2 0 0 2 2 2 0 FAD binding domain ApbA PF02558.16 BAM40160.1 - 0.038 13.6 0.0 0.078 12.6 0.0 1.6 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Ebp2 PF05890.12 BAM40160.1 - 0.091 12.3 1.9 0.14 11.7 1.9 1.3 1 0 0 1 1 1 0 Eukaryotic rRNA processing protein EBP2 DUF4342 PF14242.6 BAM40160.1 - 0.25 11.4 3.3 1.8 8.6 0.1 3.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4342) tRNA-synt_His PF13393.6 BAM40162.1 - 6.6e-31 107.7 0.0 1.1e-30 107.0 0.0 1.3 1 0 0 1 1 1 1 Histidyl-tRNA synthetase tRNA-synt_2b PF00587.25 BAM40162.1 - 0.00029 20.9 0.1 0.00041 20.4 0.1 1.3 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) eIF2A PF08662.11 BAM40163.1 - 1.3e-51 175.3 0.4 1.3e-51 175.3 0.4 2.5 3 0 0 3 3 3 1 Eukaryotic translation initiation factor eIF2A PNP_UDP_1 PF01048.20 BAM40164.1 - 1.3e-21 76.9 0.0 1.5e-21 76.8 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily PNP_UDP_1 PF01048.20 BAM40165.1 - 4.8e-05 22.7 0.0 5.9e-05 22.4 0.0 1.1 1 0 0 1 1 1 1 Phosphorylase superfamily Brix PF04427.18 BAM40166.1 - 1.1e-33 117.0 0.7 2.3e-33 115.9 0.7 1.5 1 0 0 1 1 1 1 Brix domain Rep_fac-A_C PF08646.10 BAM40167.1 - 9.8e-29 100.0 0.7 1.9e-28 99.0 0.2 1.8 2 0 0 2 2 2 1 Replication factor-A C terminal domain REPA_OB_2 PF16900.5 BAM40167.1 - 2.4e-13 49.8 2.1 6.5e-10 38.8 0.1 2.9 3 0 0 3 3 3 2 Replication protein A OB domain tRNA_anti-codon PF01336.25 BAM40167.1 - 9.2e-09 35.2 0.6 4.4e-06 26.6 0.1 2.6 2 0 0 2 2 2 2 OB-fold nucleic acid binding domain DUF223 PF02721.14 BAM40167.1 - 1.8e-05 24.9 0.2 5.1e-05 23.5 0.2 1.7 1 0 0 1 1 1 1 Domain of unknown function DUF223 DNA_ligase_ZBD PF03119.16 BAM40167.1 - 0.029 14.4 1.2 0.054 13.5 1.2 1.5 1 0 0 1 1 1 0 NAD-dependent DNA ligase C4 zinc finger domain Zn_Tnp_IS1595 PF12760.7 BAM40167.1 - 0.043 13.8 3.4 0.089 12.8 3.4 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain DZR PF12773.7 BAM40167.1 - 0.058 13.4 1.6 0.11 12.6 1.6 1.4 1 0 0 1 1 1 0 Double zinc ribbon DUF2318 PF10080.9 BAM40167.1 - 0.12 12.5 2.5 0.13 12.4 0.8 1.9 2 0 0 2 2 2 0 Predicted membrane protein (DUF2318) Diphthami_syn_2 PF01902.17 BAM40168.1 - 3.3e-40 137.9 0.7 9.3e-40 136.5 0.7 1.6 1 1 0 1 1 1 1 Diphthamide synthase ATP-synt_F PF01990.17 BAM40169.1 - 7.4e-29 99.9 0.2 8.7e-29 99.7 0.2 1.1 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit DHHC PF01529.20 BAM40170.1 - 1.7e-37 128.5 24.3 3.5e-37 127.5 16.2 2.2 2 0 0 2 2 2 2 DHHC palmitoyltransferase DUF3223 PF11523.8 BAM40172.1 - 6.2e-10 39.8 0.1 1.8e-09 38.3 0.1 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF3223) AbbA_antirepres PF14156.6 BAM40172.1 - 0.22 11.4 0.9 10 6.1 0.0 2.5 2 1 0 2 2 2 0 Antirepressor AbbA ANAPC4_WD40 PF12894.7 BAM40173.1 - 3.9e-07 30.3 0.2 0.028 14.7 0.0 3.8 3 1 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 BAM40173.1 - 0.00048 20.9 8.6 1.2 10.1 0.9 5.5 5 1 1 6 6 6 2 WD domain, G-beta repeat Lgl_C PF08596.10 BAM40173.1 - 0.15 10.7 1.1 0.87 8.2 0.1 2.3 2 1 1 3 3 3 0 Lethal giant larvae(Lgl) like, C-terminal CDT1 PF08839.11 BAM40174.1 - 7.5e-10 39.4 0.1 1.5e-09 38.4 0.1 1.5 1 0 0 1 1 1 1 DNA replication factor CDT1 like Swi3 PF07962.12 BAM40174.1 - 0.077 13.0 0.1 0.22 11.5 0.1 1.8 1 0 0 1 1 1 0 Replication Fork Protection Component Swi3 TFIIA_gamma_N PF02268.16 BAM40175.1 - 0.0057 16.6 0.0 0.014 15.4 0.0 1.7 1 1 0 1 1 1 1 Transcription initiation factor IIA, gamma subunit, helical domain TFIIA_gamma_C PF02751.14 BAM40175.1 - 0.0084 16.2 0.8 0.025 14.7 0.8 1.8 1 0 0 1 1 1 1 Transcription initiation factor IIA, gamma subunit Pox_G9-A16 PF03003.16 BAM40175.1 - 0.033 13.9 0.2 0.19 11.4 0.0 2.0 2 0 0 2 2 2 0 Pox virus entry-fusion-complex G9/A16 Dcc1 PF09724.9 BAM40176.1 - 0.00014 21.3 0.4 0.00064 19.1 0.0 2.1 2 1 0 2 2 2 1 Sister chromatid cohesion protein Dcc1 Ctf8 PF09696.10 BAM40176.1 - 0.0054 17.1 0.0 0.014 15.8 0.0 1.6 1 1 0 1 1 1 1 Ctf8 Fis1_TPR_N PF14852.6 BAM40176.1 - 0.024 14.3 0.4 8 6.2 0.1 2.5 2 0 0 2 2 2 0 Fis1 N-terminal tetratricopeptide repeat LisH PF08513.11 BAM40177.1 - 9.8e-10 38.0 0.1 2.5e-09 36.8 0.1 1.7 1 0 0 1 1 1 1 LisH ANAPC4_WD40 PF12894.7 BAM40177.1 - 4.4e-07 30.1 0.4 0.028 14.7 0.0 3.8 3 1 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 BAM40177.1 - 0.00057 20.6 8.8 1.3 10.0 0.9 5.5 5 1 1 6 6 6 2 WD domain, G-beta repeat Lgl_C PF08596.10 BAM40177.1 - 0.16 10.7 1.1 0.88 8.2 0.1 2.3 2 1 1 3 3 3 0 Lethal giant larvae(Lgl) like, C-terminal CDT1 PF08839.11 BAM40178.1 - 8e-10 39.3 0.1 1.6e-09 38.3 0.1 1.5 1 0 0 1 1 1 1 DNA replication factor CDT1 like Swi3 PF07962.12 BAM40178.1 - 0.083 12.9 0.1 0.23 11.5 0.1 1.8 1 0 0 1 1 1 0 Replication Fork Protection Component Swi3 Mito_carr PF00153.27 BAM40179.1 - 2.9e-52 174.5 5.7 3.8e-18 65.2 0.0 3.0 3 0 0 3 3 3 3 Mitochondrial carrier protein GTP1_OBG PF01018.22 BAM40180.1 - 3.1e-22 78.8 0.1 4.4e-22 78.3 0.1 1.2 1 0 0 1 1 1 1 GTP1/OBG MMR_HSR1 PF01926.23 BAM40180.1 - 8.2e-13 48.4 0.0 1.3e-12 47.8 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 BAM40180.1 - 4.2e-11 42.6 0.0 5.9e-11 42.1 0.0 1.2 1 0 0 1 1 1 1 Ferrous iron transport protein B Gtr1_RagA PF04670.12 BAM40180.1 - 0.00028 20.3 0.0 0.00036 20.0 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 BAM40180.1 - 0.0035 16.8 0.0 0.0056 16.1 0.0 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Arf PF00025.21 BAM40180.1 - 0.0061 16.0 0.0 0.011 15.2 0.0 1.4 1 1 0 1 1 1 1 ADP-ribosylation factor family Ploopntkinase3 PF18751.1 BAM40180.1 - 0.081 12.8 0.0 0.14 12.0 0.0 1.3 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 Ubiq_cyt_C_chap PF03981.12 BAM40181.1 - 3.1e-19 69.5 0.1 4.4e-19 69.0 0.1 1.2 1 0 0 1 1 1 1 Ubiquinol-cytochrome C chaperone Peptidase_S80 PF07230.11 BAM40181.1 - 0.1 10.9 0.1 0.14 10.4 0.1 1.1 1 0 0 1 1 1 0 Bacteriophage T4-like capsid assembly protein (Gp20) Mon1 PF03164.14 BAM40183.1 - 2.3e-46 158.7 3.2 2.7e-30 105.8 0.1 2.0 1 1 1 2 2 2 2 Trafficking protein Mon1 ABC_tran PF00005.27 BAM40184.1 - 1.6e-33 116.2 0.0 3.5e-33 115.0 0.0 1.6 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 BAM40184.1 - 1.7e-28 100.0 10.6 2.3e-28 99.6 10.6 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 BAM40184.1 - 1.2e-06 28.2 0.0 0.00043 19.8 0.0 2.5 2 1 1 3 3 3 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 BAM40184.1 - 0.0017 18.3 0.7 0.33 10.7 0.5 2.5 1 1 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 BAM40184.1 - 0.0052 16.5 0.3 0.021 14.6 0.1 2.1 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_16 PF13191.6 BAM40184.1 - 0.014 15.8 0.0 0.033 14.6 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 BAM40184.1 - 0.022 15.0 0.0 0.11 12.7 0.0 2.1 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 BAM40184.1 - 0.039 13.9 0.0 0.084 12.8 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase DUF87 PF01935.17 BAM40184.1 - 0.048 13.8 0.2 0.048 13.8 0.2 2.1 3 0 0 3 3 3 0 Helicase HerA, central domain Zeta_toxin PF06414.12 BAM40184.1 - 0.071 12.4 0.0 0.18 11.1 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin AAA_24 PF13479.6 BAM40184.1 - 0.1 12.3 0.1 0.25 11.0 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 BAM40184.1 - 0.11 12.0 0.0 0.3 10.6 0.0 1.7 1 0 0 1 1 1 0 P-loop containing dynein motor region SbcCD_C PF13558.6 BAM40184.1 - 0.76 10.0 2.4 4.8 7.5 0.8 2.6 2 1 0 2 2 1 0 Putative exonuclease SbcCD, C subunit RsbU_N PF08673.10 BAM40186.1 - 0.00042 20.3 0.0 0.0072 16.4 0.0 2.7 2 0 0 2 2 2 1 Phosphoserine phosphatase RsbU, N-terminal domain ADIP PF11559.8 BAM40186.1 - 0.0025 17.9 0.8 0.059 13.5 0.1 2.5 2 0 0 2 2 2 1 Afadin- and alpha -actinin-Binding DUF1149 PF06619.11 BAM40186.1 - 0.11 12.8 0.2 0.23 11.8 0.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1149) Pkinase PF00069.25 BAM40187.1 - 7e-10 38.7 0.0 2.7e-09 36.8 0.0 1.9 2 0 0 2 2 2 1 Protein kinase domain DUF4423 PF14394.6 BAM40187.1 - 0.096 12.4 0.1 0.28 10.9 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) Rcd1 PF04078.13 BAM40188.1 - 4.1e-107 357.3 1.1 5.8e-107 356.8 1.1 1.2 1 0 0 1 1 1 1 Cell differentiation family, Rcd1-like bPH_6 PF10756.9 BAM40189.1 - 0.014 15.5 0.2 0.016 15.3 0.2 1.2 1 0 0 1 1 1 0 Bacterial PH domain Tubulin PF00091.25 BAM40191.1 - 1.8e-69 233.9 0.0 5.1e-69 232.4 0.0 1.7 2 0 0 2 2 2 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 BAM40191.1 - 1.5e-42 144.8 0.2 2.3e-42 144.2 0.2 1.3 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 BAM40191.1 - 3.8e-05 24.0 0.0 0.00011 22.5 0.0 1.8 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_3 PF14881.6 BAM40191.1 - 0.011 15.4 0.0 0.025 14.3 0.0 1.6 1 0 0 1 1 1 0 Tubulin domain Tubulin_2 PF13809.6 BAM40191.1 - 0.04 13.1 0.1 0.14 11.3 0.0 1.8 2 0 0 2 2 2 0 Tubulin like FHA PF00498.26 BAM40192.1 - 2.7e-15 56.4 0.0 6e-15 55.3 0.0 1.6 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 BAM40192.1 - 2.9e-10 40.3 0.0 6.1e-10 39.3 0.0 1.5 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain GNAT_acetyltran PF12746.7 BAM40192.1 - 1 8.9 5.4 8.1 5.9 0.3 2.2 2 0 0 2 2 2 0 GNAT acetyltransferase DNA_topoisoIV PF00521.20 BAM40193.1 - 3.5e-129 431.4 2.9 3.5e-129 431.4 2.9 2.8 3 0 0 3 3 3 1 DNA gyrase/topoisomerase IV, subunit A TOPRIM_C PF16898.5 BAM40193.1 - 3e-45 153.6 8.0 3e-45 153.6 8.0 4.6 6 0 0 6 6 6 1 C-terminal associated domain of TOPRIM DNA_gyraseB PF00204.25 BAM40193.1 - 1.2e-22 80.2 2.6 4.1e-22 78.5 2.6 1.9 1 0 0 1 1 1 1 DNA gyrase B HATPase_c PF02518.26 BAM40193.1 - 3.8e-08 33.8 2.8 2.1e-07 31.4 0.0 3.7 4 0 0 4 4 4 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Toprim PF01751.22 BAM40193.1 - 5.4e-08 33.0 0.0 2.7e-07 30.8 0.0 2.3 1 0 0 1 1 1 1 Toprim domain DNA_gyraseB_C PF00986.21 BAM40193.1 - 0.0054 16.9 0.0 0.057 13.6 0.0 2.6 2 0 0 2 2 2 1 DNA gyrase B subunit, carboxyl terminus Sec20 PF03908.13 BAM40195.1 - 1.1e-05 25.2 1.5 1.6e-05 24.7 1.5 1.3 1 0 0 1 1 1 1 Sec20 V-SNARE_C PF12352.8 BAM40195.1 - 3e-05 24.2 3.6 4.2e-05 23.7 3.6 1.3 1 0 0 1 1 1 1 Snare region anchored in the vesicle membrane C-terminus DNA_pol_D_N PF18018.1 BAM40196.1 - 1.3e-27 96.5 0.2 2.1e-27 95.8 0.2 1.3 1 0 0 1 1 1 1 DNA polymerase delta subunit OB-fold domain DNA_pol_E_B PF04042.16 BAM40196.1 - 6.8e-18 64.8 0.1 1e-16 60.9 0.1 2.3 1 1 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B Rootletin PF15035.6 BAM40197.1 - 0.003 17.6 3.7 0.0045 17.0 3.7 1.2 1 0 0 1 1 1 1 Ciliary rootlet component, centrosome cohesion DinB_2 PF12867.7 BAM40197.1 - 0.026 15.0 0.4 0.042 14.4 0.4 1.2 1 0 0 1 1 1 0 DinB superfamily CENP-Q PF13094.6 BAM40197.1 - 0.057 13.6 1.4 0.084 13.1 1.4 1.4 1 0 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit Cupin_8 PF13621.6 BAM40198.1 - 8.2e-28 97.8 0.0 1.1e-27 97.4 0.0 1.1 1 0 0 1 1 1 1 Cupin-like domain Cupin_4 PF08007.12 BAM40198.1 - 1.6e-09 37.7 0.0 3.2e-09 36.7 0.0 1.5 1 1 0 1 1 1 1 Cupin superfamily protein JmjC PF02373.22 BAM40198.1 - 0.062 13.7 0.0 0.12 12.8 0.0 1.5 1 0 0 1 1 1 0 JmjC domain, hydroxylase DAGK_acc PF00609.19 BAM40201.1 - 4.5e-32 111.6 0.0 6.2e-32 111.1 0.0 1.2 1 0 0 1 1 1 1 Diacylglycerol kinase accessory domain DAGK_cat PF00781.24 BAM40201.1 - 7.2e-13 48.3 0.0 1.3e-12 47.5 0.0 1.3 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain NAD_kinase PF01513.21 BAM40201.1 - 0.056 12.6 0.1 0.11 11.7 0.1 1.3 1 0 0 1 1 1 0 ATP-NAD kinase PPR_3 PF13812.6 BAM40201.1 - 0.071 13.2 0.0 13 6.0 0.0 2.6 2 0 0 2 2 2 0 Pentatricopeptide repeat domain TPR_14 PF13428.6 BAM40202.1 - 1.2e-17 63.1 0.8 0.00062 20.4 0.1 9.5 6 3 5 11 11 10 3 Tetratricopeptide repeat TPR_19 PF14559.6 BAM40202.1 - 8.1e-12 45.5 0.0 9e-06 26.1 0.0 5.3 5 0 0 5 5 4 2 Tetratricopeptide repeat TPR_17 PF13431.6 BAM40202.1 - 1.5e-10 40.7 6.2 0.02 15.2 0.1 7.2 6 0 0 6 6 6 2 Tetratricopeptide repeat Suf PF05843.14 BAM40202.1 - 1e-08 35.5 27.4 0.0076 16.3 2.1 6.3 2 2 2 4 4 4 3 Suppressor of forked protein (Suf) HAT PF02184.16 BAM40202.1 - 3.4e-07 30.1 37.9 0.031 14.2 0.1 10.0 10 2 0 10 10 9 3 HAT (Half-A-TPR) repeat Mad3_BUB1_I PF08311.12 BAM40202.1 - 1.1e-06 28.6 19.5 0.002 18.1 4.7 6.2 5 1 0 5 5 5 2 Mad3/BUB1 homology region 1 TPR_2 PF07719.17 BAM40202.1 - 4.5e-06 26.4 16.5 0.054 13.6 0.0 9.5 11 0 0 11 11 10 1 Tetratricopeptide repeat TPR_8 PF13181.6 BAM40202.1 - 5.4e-05 23.1 16.6 0.16 12.3 0.0 9.3 10 1 1 11 11 11 1 Tetratricopeptide repeat TPR_16 PF13432.6 BAM40202.1 - 0.00013 22.5 0.1 0.13 12.9 0.0 4.1 4 1 1 5 5 4 2 Tetratricopeptide repeat U3_assoc_6 PF08640.11 BAM40202.1 - 0.00048 20.1 16.2 0.019 15.1 0.5 6.5 4 2 2 6 6 6 2 U3 small nucleolar RNA-associated protein 6 TPR_6 PF13174.6 BAM40202.1 - 0.0017 18.8 5.1 29 5.6 0.0 7.6 9 0 0 9 9 8 0 Tetratricopeptide repeat TPR_11 PF13414.6 BAM40202.1 - 0.002 17.7 1.1 17 5.2 0.0 4.7 5 0 0 5 5 5 0 TPR repeat TPR_7 PF13176.6 BAM40202.1 - 0.0041 17.0 2.0 1.2 9.4 0.0 5.3 6 0 0 6 6 6 1 Tetratricopeptide repeat MIT PF04212.18 BAM40202.1 - 0.056 13.5 3.8 1.2 9.2 0.4 4.2 4 0 0 4 4 4 0 MIT (microtubule interacting and transport) domain TPR_9 PF13371.6 BAM40202.1 - 0.063 13.4 0.1 0.32 11.2 0.1 2.3 1 1 0 1 1 1 0 Tetratricopeptide repeat TPR_1 PF00515.28 BAM40202.1 - 0.2 11.5 5.9 5.4 7.0 0.0 5.4 7 0 0 7 7 7 0 Tetratricopeptide repeat AP2 PF00847.20 BAM40204.1 - 1.4e-06 28.4 0.0 3.8e-05 23.8 0.0 2.3 2 0 0 2 2 2 1 AP2 domain Med14 PF08638.11 BAM40205.1 - 1.3e-12 47.6 0.3 3.6e-12 46.1 0.0 1.9 2 0 0 2 2 2 1 Mediator complex subunit MED14 SF3b10 PF07189.11 BAM40206.1 - 4.1e-32 110.1 0.1 5e-32 109.9 0.1 1.0 1 0 0 1 1 1 1 Splicing factor 3B subunit 10 (SF3b10) Oxidoreduct_C PF16490.5 BAM40206.1 - 0.032 14.0 0.1 0.036 13.8 0.1 1.1 1 0 0 1 1 1 0 Putative oxidoreductase C terminal domain P22_AR_C PF10548.9 BAM40206.1 - 0.071 13.3 0.0 0.38 11.0 0.0 1.8 2 0 0 2 2 2 0 P22AR C-terminal domain Leo1 PF04004.13 BAM40209.1 - 2.8e-07 30.6 2.3 2.8e-07 30.6 2.3 2.4 3 0 0 3 3 3 1 Leo1-like protein RNA_pol_Rpc4 PF05132.14 BAM40209.1 - 0.21 12.0 3.7 0.21 12.0 0.0 2.6 2 1 0 2 2 2 0 RNA polymerase III RPC4 NOG1_N PF17835.1 BAM40210.1 - 0.0051 16.8 2.3 0.022 14.7 0.7 2.5 1 1 0 2 2 2 1 NOG1 N-terminal helical domain Remorin_C PF03763.13 BAM40210.1 - 0.013 15.3 1.2 0.031 14.2 1.2 1.7 1 0 0 1 1 1 0 Remorin, C-terminal region ORC6 PF05460.13 BAM40210.1 - 0.046 13.0 10.0 0.065 12.5 10.0 1.2 1 0 0 1 1 1 0 Origin recognition complex subunit 6 (ORC6) Cu_bind_like PF02298.17 BAM40210.1 - 0.13 12.3 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 Plastocyanin-like domain Med9 PF07544.13 BAM40210.1 - 0.17 12.0 5.2 0.29 11.3 0.9 2.7 1 1 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 RAP PF08373.10 BAM40211.1 - 0.0021 18.1 0.0 0.0052 16.8 0.0 1.7 1 0 0 1 1 1 1 RAP domain CS PF04969.16 BAM40212.1 - 0.00035 21.5 0.1 0.00057 20.9 0.1 1.3 1 0 0 1 1 1 1 CS domain PBP1_TM PF14812.6 BAM40212.1 - 1.2 9.6 11.8 2.9 8.3 11.8 1.6 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal Ribosomal_S6e PF01092.19 BAM40213.1 - 4.2e-55 185.1 0.0 4.2e-55 185.1 0.0 1.7 2 0 0 2 2 2 1 Ribosomal protein S6e ATP-synt_D PF01813.17 BAM40214.1 - 1.4e-55 188.2 2.3 1.6e-55 188.0 2.3 1.1 1 0 0 1 1 1 1 ATP synthase subunit D VHP PF02209.19 BAM40214.1 - 0.39 10.8 1.6 0.68 10.1 0.4 2.0 2 0 0 2 2 2 0 Villin headpiece domain MINDY_DUB PF04424.13 BAM40215.1 - 1e-15 57.8 0.0 1.9e-15 56.9 0.0 1.5 1 0 0 1 1 1 1 MINDY deubiquitinase CheW PF01584.19 BAM40215.1 - 0.019 14.6 0.0 0.061 13.0 0.0 1.7 2 0 0 2 2 2 0 CheW-like domain DnaJ PF00226.31 BAM40216.1 - 6.5e-20 71.0 0.2 2.1e-19 69.4 0.2 2.0 1 0 0 1 1 1 1 DnaJ domain Sec63 PF02889.16 BAM40216.1 - 2.3e-15 56.5 0.0 6.6e-15 55.0 0.0 1.7 1 1 0 1 1 1 1 Sec63 Brl domain Xylo_C PF12529.8 BAM40216.1 - 0.038 13.6 0.1 0.13 11.9 0.1 1.8 2 0 0 2 2 2 0 Xylosyltransferase C terminal CCDC144C PF14915.6 BAM40217.1 - 0.005 16.0 39.5 0.049 12.8 25.5 3.2 1 1 0 2 2 2 2 CCDC144C protein coiled-coil region Laminin_II PF06009.12 BAM40217.1 - 0.012 15.6 28.2 0.11 12.5 8.0 3.7 1 1 3 4 4 4 0 Laminin Domain II Golgin_A5 PF09787.9 BAM40217.1 - 0.019 14.5 40.5 0.014 14.8 19.5 2.2 1 1 1 2 2 2 0 Golgin subfamily A member 5 MCPsignal PF00015.21 BAM40217.1 - 0.021 14.6 14.9 1.6 8.5 1.4 3.3 1 1 2 3 3 3 0 Methyl-accepting chemotaxis protein (MCP) signalling domain NPV_P10 PF05531.12 BAM40217.1 - 0.072 13.6 11.9 1.7 9.1 0.6 3.9 1 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein DUF1729 PF08354.10 BAM40217.1 - 0.08 11.8 6.0 0.022 13.7 1.4 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF1729) Syntaxin_2 PF14523.6 BAM40217.1 - 0.083 13.3 24.5 0.29 11.5 9.0 3.6 1 1 2 3 3 3 0 Syntaxin-like protein ATG27 PF09451.10 BAM40217.1 - 0.15 11.9 3.8 0.18 11.6 3.8 1.3 1 0 0 1 1 1 0 Autophagy-related protein 27 SlyX PF04102.12 BAM40217.1 - 0.27 11.9 14.3 14 6.4 2.7 4.6 2 1 2 4 4 4 0 SlyX Atg14 PF10186.9 BAM40217.1 - 0.28 10.2 23.8 0.24 10.4 20.6 2.0 1 1 1 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 TPR_MLP1_2 PF07926.12 BAM40217.1 - 0.39 10.8 28.7 0.43 10.6 7.1 3.2 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein Exonuc_VII_L PF02601.15 BAM40217.1 - 0.53 9.8 24.3 0.086 12.4 10.9 2.2 1 1 1 2 2 2 0 Exonuclease VII, large subunit Jnk-SapK_ap_N PF09744.9 BAM40217.1 - 0.65 10.2 33.9 0.65 10.2 11.1 3.0 1 1 2 3 3 3 0 JNK_SAPK-associated protein-1 Bacillus_HBL PF05791.11 BAM40217.1 - 0.82 9.5 18.6 0.033 14.0 3.8 3.0 1 1 2 3 3 3 0 Bacillus haemolytic enterotoxin (HBL) ATG16 PF08614.11 BAM40217.1 - 1.4 9.1 29.4 6.1 7.0 8.0 3.5 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) TMPIT PF07851.13 BAM40217.1 - 1.9 7.6 28.6 0.59 9.3 8.6 2.9 1 1 2 3 3 3 0 TMPIT-like protein Fez1 PF06818.15 BAM40217.1 - 3.9 7.9 32.6 6.9 7.1 10.9 2.8 1 1 1 2 2 2 0 Fez1 ArAE_2_N PF10337.9 BAM40217.1 - 4.3 6.2 15.1 2.4 7.1 2.2 2.1 2 0 0 2 2 2 0 Putative ER transporter, 6TM, N-terminal Spc7 PF08317.11 BAM40217.1 - 5 5.9 37.2 0.23 10.3 15.5 2.4 1 1 0 2 2 2 0 Spc7 kinetochore protein TolA_bind_tri PF16331.5 BAM40217.1 - 8.4 6.6 17.7 2.2 8.4 3.5 3.9 1 1 3 4 4 4 0 TolA binding protein trimerisation DUF948 PF06103.11 BAM40217.1 - 8.8 6.7 13.5 9.2 6.6 2.8 3.8 2 1 2 4 4 4 0 Bacterial protein of unknown function (DUF948) FCH PF00611.23 BAM40218.1 - 0.0077 16.5 0.2 3.1 8.2 0.1 2.5 2 0 0 2 2 2 2 Fes/CIP4, and EFC/F-BAR homology domain Solute_trans_a PF03619.16 BAM40219.1 - 1.9e-48 165.3 19.5 2.3e-48 165.0 19.5 1.1 1 0 0 1 1 1 1 Organic solute transporter Ostalpha cNMP_binding PF00027.29 BAM40220.1 - 9.7e-27 92.9 0.1 9.6e-22 76.9 0.0 2.8 2 1 1 3 3 3 2 Cyclic nucleotide-binding domain AP2 PF00847.20 BAM40223.1 - 7.7e-07 29.3 0.7 1.7e-06 28.2 0.7 1.6 1 0 0 1 1 1 1 AP2 domain DEAD PF00270.29 BAM40224.1 - 7.1e-37 126.9 0.0 3e-35 121.6 0.0 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM40224.1 - 2.2e-25 89.2 0.0 5.6e-25 87.8 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM40224.1 - 3.1e-07 30.6 0.0 5.4e-05 23.3 0.0 2.5 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 BAM40224.1 - 5.4e-05 22.5 0.0 0.00011 21.5 0.0 1.4 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase DUF4217 PF13959.6 BAM40224.1 - 0.0018 18.5 0.0 0.0045 17.2 0.0 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) AAA_19 PF13245.6 BAM40224.1 - 0.14 12.5 0.0 0.38 11.1 0.0 1.8 1 0 0 1 1 1 0 AAA domain Bac_small_YrzI PF09501.10 BAM40224.1 - 1.1 9.4 3.9 5.4 7.2 0.6 2.7 2 0 0 2 2 2 0 Probable sporulation protein (Bac_small_yrzI) SpoIIIAH PF12685.7 BAM40224.1 - 5.8 6.7 11.5 11 5.8 11.5 1.4 1 0 0 1 1 1 0 SpoIIIAH-like protein CAF1A PF12253.8 BAM40225.1 - 0.0039 17.3 0.9 0.0039 17.3 0.9 2.3 2 0 0 2 2 2 1 Chromatin assembly factor 1 subunit A Spexin PF15171.6 BAM40225.1 - 0.026 14.7 1.2 0.089 13.0 1.2 1.9 1 0 0 1 1 1 0 Neuropeptide secretory protein family, NPQ, spexin Cnd3 PF12719.7 BAM40225.1 - 0.069 12.3 0.9 0.13 11.5 0.9 1.4 1 0 0 1 1 1 0 Nuclear condensing complex subunits, C-term domain UPF0242 PF06785.11 BAM40225.1 - 0.33 11.0 10.5 2.3 8.3 10.7 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus PHO4 PF01384.20 BAM40226.1 - 1.1e-92 310.7 1.2 1.6e-92 310.2 1.2 1.2 1 0 0 1 1 1 1 Phosphate transporter family HTH_IclR PF09339.10 BAM40226.1 - 0.23 11.3 0.4 6.3 6.7 0.0 2.8 3 0 0 3 3 3 0 IclR helix-turn-helix domain PHO4 PF01384.20 BAM40228.1 - 7.3e-101 337.6 0.5 1e-100 337.1 0.5 1.2 1 0 0 1 1 1 1 Phosphate transporter family DUF4044 PF13253.6 BAM40228.1 - 0.1 12.1 2.2 0.51 9.9 2.2 2.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4044) CENP-K PF11802.8 BAM40229.1 - 0.27 10.8 9.3 0.4 10.2 9.3 1.2 1 0 0 1 1 1 0 Centromere-associated protein K cNMP_binding PF00027.29 BAM40230.1 - 4.4e-16 58.7 0.0 1.5e-06 28.2 0.0 3.6 3 0 0 3 3 3 2 Cyclic nucleotide-binding domain EF-hand_6 PF13405.6 BAM40230.1 - 0.098 12.6 0.1 53 4.1 0.0 3.7 4 0 0 4 4 4 0 EF-hand domain VF530 PF09905.9 BAM40230.1 - 0.1 12.8 0.0 0.37 11.0 0.0 2.0 1 0 0 1 1 1 0 DNA-binding protein VF530 HSA PF07529.13 BAM40231.1 - 0.00033 20.9 0.1 0.00033 20.9 0.1 2.8 2 0 0 2 2 2 1 HSA 3HCDH PF00725.22 BAM40231.1 - 0.13 12.9 0.4 0.42 11.2 0.4 1.9 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain Peptidase_C54 PF03416.19 BAM40232.1 - 4.9e-43 147.5 0.1 6.1e-43 147.2 0.1 1.0 1 0 0 1 1 1 1 Peptidase family C54 Not1 PF04054.15 BAM40233.1 - 6.9e-31 107.5 5.2 1.7e-30 106.1 5.2 1.7 1 0 0 1 1 1 1 CCR4-Not complex component, Not1 CNOT1_CAF1_bind PF16415.5 BAM40233.1 - 7.1e-28 97.5 5.8 7.1e-28 97.5 5.8 2.3 2 0 0 2 2 2 1 CCR4-NOT transcription complex subunit 1 CAF1-binding domain DUF3819 PF12842.7 BAM40233.1 - 5.3e-26 91.3 0.1 5.3e-26 91.3 0.1 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF3819) DKCLD PF08068.12 BAM40234.1 - 1e-31 108.7 0.2 1.4e-30 105.1 0.3 2.4 2 0 0 2 2 2 1 DKCLD (NUC011) domain TruB_N PF01509.18 BAM40234.1 - 2.9e-24 86.2 0.2 1.4e-16 61.2 0.1 3.2 1 1 1 2 2 2 2 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 BAM40234.1 - 1.7e-21 76.1 0.2 3.6e-21 75.1 0.2 1.6 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain PUA PF01472.20 BAM40234.1 - 2e-18 66.1 2.3 3.8e-18 65.2 2.3 1.5 1 0 0 1 1 1 1 PUA domain UPF0113 PF03657.13 BAM40234.1 - 0.036 14.3 0.0 0.11 12.8 0.0 1.9 1 1 0 1 1 1 0 UPF0113 PUA domain PseudoU_synth_2 PF00849.22 BAM40234.1 - 0.042 13.9 0.0 0.069 13.2 0.0 1.4 1 0 0 1 1 1 0 RNA pseudouridylate synthase DEAD PF00270.29 BAM40235.1 - 3.8e-20 72.4 0.0 8.7e-20 71.2 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM40235.1 - 3.1e-16 59.7 0.1 9.1e-14 51.7 0.1 2.6 2 0 0 2 2 2 2 Helicase conserved C-terminal domain RecQ_Zn_bind PF16124.5 BAM40235.1 - 2.8e-11 43.9 3.3 1.3e-10 41.8 3.3 2.3 1 0 0 1 1 1 1 RecQ zinc-binding ResIII PF04851.15 BAM40235.1 - 1.9e-07 31.3 0.0 9.5e-07 29.0 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DTC PF18102.1 BAM40236.1 - 1.8e-27 96.1 0.0 3.6e-27 95.1 0.0 1.5 1 0 0 1 1 1 1 Deltex C-terminal domain zf-RING_2 PF13639.6 BAM40236.1 - 4.5e-08 33.3 3.6 4.5e-08 33.3 3.6 1.7 2 0 0 2 2 1 1 Ring finger domain zf-C3HC4 PF00097.25 BAM40236.1 - 2.4e-05 24.1 4.8 4.5e-05 23.2 4.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 BAM40236.1 - 5e-05 23.0 4.4 8.9e-05 22.3 4.4 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 BAM40236.1 - 6.8e-05 22.8 2.2 0.00014 21.8 2.2 1.5 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_11 PF17123.5 BAM40236.1 - 0.00074 19.2 2.3 0.0017 18.0 2.3 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-rbx1 PF12678.7 BAM40236.1 - 0.0032 17.7 3.1 0.013 15.8 3.1 2.0 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 BAM40236.1 - 0.0033 17.4 6.5 0.0066 16.4 6.5 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 BAM40236.1 - 0.004 17.2 0.6 0.01 15.8 0.6 1.7 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger Zn_ribbon_17 PF17120.5 BAM40236.1 - 0.0095 15.5 4.0 0.0095 15.5 4.0 1.9 2 0 0 2 2 2 1 Zinc-ribbon, C4HC2 type PHD PF00628.29 BAM40236.1 - 0.029 14.2 4.9 0.066 13.1 4.9 1.6 1 0 0 1 1 1 0 PHD-finger zf-RING-like PF08746.11 BAM40236.1 - 0.31 11.4 2.7 0.81 10.1 2.7 1.7 1 0 0 1 1 1 0 RING-like domain zf-C3HC4_4 PF15227.6 BAM40236.1 - 0.76 10.0 5.0 1.6 9.0 5.0 1.6 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING SKIP_SNW PF02731.15 BAM40237.1 - 3e-63 212.3 6.7 3e-63 212.3 6.7 3.4 3 1 1 4 4 4 1 SKIP/SNW domain CA_like PF10563.9 BAM40237.1 - 6.9 6.6 6.9 55 3.6 0.0 2.5 2 0 0 2 2 2 0 Putative carbonic anhydrase GBP PF02263.19 BAM40238.1 - 6.5e-14 51.8 0.4 1.3e-09 37.7 0.0 2.5 1 1 1 2 2 2 2 Guanylate-binding protein, N-terminal domain MMR_HSR1 PF01926.23 BAM40238.1 - 0.08 13.0 2.0 0.76 9.9 2.0 2.4 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF2385 PF09539.10 BAM40238.1 - 0.13 12.7 0.4 3.1 8.4 0.1 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF2385) DnaJ-X PF14308.6 BAM40242.1 - 6.5e-35 120.5 0.3 1.2e-34 119.6 0.3 1.5 1 0 0 1 1 1 1 X-domain of DnaJ-containing DnaJ PF00226.31 BAM40242.1 - 5.6e-23 80.8 2.6 5.6e-23 80.8 2.6 1.8 2 0 0 2 2 2 1 DnaJ domain NifW PF03206.14 BAM40242.1 - 0.031 14.8 0.3 0.16 12.5 0.1 2.3 2 1 1 3 3 3 0 Nitrogen fixation protein NifW DUF5398 PF17376.2 BAM40242.1 - 0.16 12.6 2.5 1.1 10.0 0.8 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5398) Glyco_tran_28_C PF04101.16 BAM40243.1 - 2.6e-18 66.6 0.0 3.5e-18 66.2 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase family 28 C-terminal domain UvrB_inter PF17757.1 BAM40243.1 - 0.11 12.6 0.0 0.19 11.9 0.0 1.3 1 0 0 1 1 1 0 UvrB interaction domain LUC7 PF03194.15 BAM40245.1 - 1.4e-68 231.3 4.0 2.1e-68 230.7 4.0 1.2 1 0 0 1 1 1 1 LUC7 N_terminus Viral_P18 PF04521.13 BAM40245.1 - 0.068 13.0 0.1 0.18 11.6 0.1 1.7 1 0 0 1 1 1 0 ssRNA positive strand viral 18kD cysteine rich protein PRP38_assoc PF12871.7 BAM40245.1 - 0.14 12.8 38.6 0.32 11.6 38.6 1.7 1 0 0 1 1 1 0 Pre-mRNA-splicing factor 38-associated hydrophilic C-term DSHCT PF08148.12 BAM40246.1 - 6.9e-44 149.4 0.3 1.9e-43 147.9 0.3 1.7 1 0 0 1 1 1 1 DSHCT (NUC185) domain rRNA_proc-arch PF13234.6 BAM40246.1 - 1.5e-36 126.7 8.2 3e-36 125.7 8.2 1.5 1 0 0 1 1 1 1 rRNA-processing arch domain DEAD PF00270.29 BAM40246.1 - 1.3e-17 64.1 0.0 6.2e-17 61.9 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM40246.1 - 2.3e-07 31.1 0.0 1.4e-06 28.7 0.0 2.4 1 1 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM40246.1 - 0.0012 18.9 0.2 0.0045 17.0 0.0 2.1 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DUF5344 PF17279.2 BAM40246.1 - 0.12 13.0 5.2 0.069 13.7 1.3 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5344) CsgF PF10614.9 BAM40246.1 - 0.23 11.7 1.8 11 6.2 0.0 2.5 2 0 0 2 2 2 0 Type VIII secretion system (T8SS), CsgF protein AAA_22 PF13401.6 BAM40246.1 - 0.24 11.7 0.7 2.1 8.6 0.0 2.9 3 1 0 3 3 3 0 AAA domain Swi5 PF07061.11 BAM40246.1 - 0.36 11.0 0.0 0.36 11.0 0.0 3.2 3 0 0 3 3 3 0 Swi5 AAA_14 PF13173.6 BAM40246.1 - 1.5 8.8 8.9 2.8 8.0 0.0 4.3 5 1 0 5 5 5 0 AAA domain Cor1 PF04803.12 BAM40246.1 - 6.2 7.1 13.1 1.1 9.5 2.0 3.2 3 0 0 3 3 3 0 Cor1/Xlr/Xmr conserved region MAT1 PF06391.13 BAM40249.1 - 1.6e-12 47.7 9.2 2.3e-12 47.2 9.2 1.1 1 0 0 1 1 1 1 CDK-activating kinase assembly factor MAT1 zf-C3HC4_3 PF13920.6 BAM40249.1 - 1.4e-05 24.8 6.8 2.9e-05 23.8 6.8 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 BAM40249.1 - 4.8e-05 23.6 7.2 0.0001 22.5 7.2 1.6 1 0 0 1 1 1 1 Ring finger domain zf-RING_UBOX PF13445.6 BAM40249.1 - 0.00035 20.5 2.2 0.00091 19.2 0.9 2.2 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 BAM40249.1 - 0.0012 18.6 8.9 0.0029 17.5 8.9 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 BAM40249.1 - 0.0095 15.9 6.6 0.021 14.8 6.6 1.6 1 0 0 1 1 1 1 zinc-RING finger domain Baculo_IE-1 PF05290.11 BAM40249.1 - 0.21 11.5 5.2 0.12 12.3 2.7 1.9 2 0 0 2 2 2 0 Baculovirus immediate-early protein (IE-0) zf-ANAPC11 PF12861.7 BAM40249.1 - 0.22 11.6 2.1 0.44 10.6 2.1 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4_5 PF17121.5 BAM40249.1 - 0.32 10.9 4.6 0.97 9.4 4.6 1.9 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 BAM40249.1 - 0.34 10.7 10.2 0.082 12.7 2.4 2.7 3 0 0 3 3 3 0 RING-like zinc finger Prok-RING_4 PF14447.6 BAM40249.1 - 0.45 10.4 10.8 11 6.0 11.0 2.4 1 1 0 1 1 1 0 Prokaryotic RING finger family 4 zf-RING_4 PF14570.6 BAM40249.1 - 0.76 9.6 6.0 0.67 9.8 4.4 1.8 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-C3HC4_2 PF13923.6 BAM40249.1 - 3.6 7.5 14.6 0.63 9.9 9.5 2.4 2 1 1 3 3 3 0 Zinc finger, C3HC4 type (RING finger) C2 PF00168.30 BAM40250.1 - 1.8e-24 86.0 0.6 4.3e-06 27.0 0.0 6.7 6 0 0 6 6 6 5 C2 domain E1-E2_ATPase PF00122.20 BAM40251.1 - 2.4e-50 170.6 0.4 2.4e-50 170.6 0.4 2.3 3 0 0 3 3 3 1 E1-E2 ATPase Cation_ATPase_C PF00689.21 BAM40251.1 - 1.5e-47 161.6 1.9 1.5e-47 161.6 1.9 2.0 2 0 0 2 2 2 1 Cation transporting ATPase, C-terminus Hydrolase PF00702.26 BAM40251.1 - 2.3e-20 73.8 0.3 7.7e-17 62.3 0.1 3.1 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 BAM40251.1 - 7.9e-12 45.1 0.8 6.8e-11 42.1 0.8 2.3 1 1 0 1 1 1 1 Cation transport ATPase (P-type) Cation_ATPase_N PF00690.26 BAM40251.1 - 8e-11 41.5 0.0 2.2e-10 40.0 0.0 1.9 1 0 0 1 1 1 1 Cation transporter/ATPase, N-terminus HAD PF12710.7 BAM40251.1 - 5.7e-05 23.6 0.0 0.00017 22.1 0.0 1.7 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 BAM40251.1 - 0.00078 19.2 6.5 0.0031 17.3 1.6 2.9 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase TRM PF02005.16 BAM40252.1 - 1.2e-96 324.2 0.5 9.5e-57 192.9 0.1 3.1 2 1 1 3 3 3 3 N2,N2-dimethylguanosine tRNA methyltransferase DUF2067 PF09840.9 BAM40252.1 - 0.00076 19.1 0.0 0.0019 17.8 0.0 1.6 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2067) MARVEL PF01284.23 BAM40253.1 - 0.023 14.7 2.7 0.029 14.4 2.7 1.1 1 0 0 1 1 1 0 Membrane-associating domain UFD1 PF03152.14 BAM40254.1 - 1.8e-60 203.4 0.0 2.8e-60 202.7 0.0 1.2 1 0 0 1 1 1 1 Ubiquitin fusion degradation protein UFD1 CX9C PF16860.5 BAM40255.1 - 4.2e-09 36.3 10.9 4.8e-07 29.7 4.2 3.4 2 1 1 3 3 3 3 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, CHCH PF06747.13 BAM40255.1 - 1.3e-07 31.6 7.4 1.4e-05 25.0 0.7 3.4 1 1 2 3 3 3 2 CHCH domain Cmc1 PF08583.10 BAM40255.1 - 0.013 15.5 3.1 0.013 15.5 3.1 2.4 1 1 1 2 2 2 0 Cytochrome c oxidase biogenesis protein Cmc1 like NDUF_B7 PF05676.13 BAM40255.1 - 0.015 15.0 8.7 0.061 13.1 2.0 3.1 1 1 2 3 3 3 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) COX6B PF02297.17 BAM40255.1 - 2.1 8.6 13.6 0.45 10.8 7.0 2.4 1 1 1 2 2 2 0 Cytochrome oxidase c subunit VIb MCM PF00493.23 BAM40256.1 - 7.7e-89 296.6 0.0 1.3e-88 295.9 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain MCM_OB PF17207.3 BAM40256.1 - 9.4e-33 112.7 0.0 1.6e-32 112.0 0.0 1.4 1 0 0 1 1 1 1 MCM OB domain MCM_lid PF17855.1 BAM40256.1 - 4e-21 75.2 0.1 1.1e-20 73.8 0.1 1.8 1 0 0 1 1 1 1 MCM AAA-lid domain MCM_N PF14551.6 BAM40256.1 - 1.3e-08 35.4 0.0 4.3e-08 33.7 0.0 1.9 1 0 0 1 1 1 1 MCM N-terminal domain Mg_chelatase PF01078.21 BAM40256.1 - 4.6e-08 32.7 0.1 3e-05 23.5 0.0 2.5 1 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 BAM40256.1 - 4.8e-06 26.6 0.0 1.1e-05 25.4 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Sigma54_activat PF00158.26 BAM40256.1 - 1.6e-05 24.7 0.0 4.6e-05 23.2 0.0 1.7 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_16 PF13191.6 BAM40256.1 - 0.011 16.1 0.3 0.034 14.5 0.1 1.9 2 0 0 2 2 2 0 AAA ATPase domain AAA PF00004.29 BAM40256.1 - 0.018 15.5 0.0 0.06 13.8 0.0 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_3 PF07726.11 BAM40256.1 - 0.026 14.4 0.0 0.079 12.8 0.0 1.8 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 BAM40256.1 - 0.11 12.5 0.1 0.4 10.8 0.0 2.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase SRP54_N PF02881.19 BAM40256.1 - 0.14 12.4 0.8 0.98 9.7 0.0 2.8 3 0 0 3 3 3 0 SRP54-type protein, helical bundle domain AAA_22 PF13401.6 BAM40256.1 - 0.15 12.4 0.2 1.1 9.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain DEK_C PF08766.11 BAM40257.1 - 9.8e-06 25.4 0.0 2.4e-05 24.2 0.0 1.7 1 0 0 1 1 1 1 DEK C terminal domain PP2C_C PF07830.13 BAM40257.1 - 0.43 11.1 5.7 0.19 12.2 0.8 2.7 2 1 1 3 3 3 0 Protein serine/threonine phosphatase 2C, C-terminal domain CPP1-like PF11833.8 BAM40257.1 - 2.1 8.0 6.0 1.7 8.3 2.2 2.1 1 1 1 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like SieB PF14163.6 BAM40260.1 - 0.043 13.3 0.2 0.048 13.2 0.2 1.2 1 0 0 1 1 1 0 Super-infection exclusion protein B Spore-coat_CotD PF11122.8 BAM40261.1 - 0.13 13.0 2.8 3.6 8.4 0.7 2.6 2 0 0 2 2 2 0 Inner spore coat protein D Occludin_ELL PF07303.13 BAM40261.1 - 1.5 9.6 5.8 5.9 7.7 0.1 3.0 2 1 1 3 3 3 0 Occludin homology domain 5_3_exonuc_N PF02739.16 BAM40262.1 - 5.8e-30 104.3 0.0 2.4e-24 86.0 0.0 2.4 2 0 0 2 2 2 2 5'-3' exonuclease, N-terminal resolvase-like domain 5_3_exonuc PF01367.20 BAM40262.1 - 5e-19 68.7 0.0 1.2e-18 67.4 0.0 1.7 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold DNA_pol_lambd_f PF10391.9 BAM40262.1 - 0.0016 18.2 0.0 0.0044 16.8 0.0 1.7 1 0 0 1 1 1 1 Fingers domain of DNA polymerase lambda HHH_5 PF14520.6 BAM40262.1 - 0.0033 18.0 0.0 0.0086 16.7 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_2 PF12826.7 BAM40262.1 - 0.012 15.6 0.0 0.073 13.2 0.0 2.2 1 1 1 2 2 2 0 Helix-hairpin-helix motif Gifsy-2 PF13856.6 BAM40262.1 - 0.11 12.8 0.3 0.22 11.9 0.3 1.4 1 0 0 1 1 1 0 ATP-binding sugar transporter from pro-phage Sel1 PF08238.12 BAM40263.1 - 1.2e-15 57.6 6.5 0.00021 21.9 0.1 6.2 6 0 0 6 6 6 3 Sel1 repeat DUF3452 PF11934.8 BAM40263.1 - 0.11 12.1 0.1 0.39 10.3 0.1 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF3452) RRM_1 PF00076.22 BAM40264.1 - 3.2e-15 55.7 0.1 2.6e-13 49.6 0.1 2.3 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 BAM40264.1 - 0.001 18.7 0.0 0.065 12.8 0.0 2.2 1 1 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 BAM40264.1 - 0.097 12.8 0.0 0.18 11.9 0.0 1.5 1 1 0 1 1 1 0 RNA recognition motif DUF4611 PF15387.6 BAM40266.1 - 0.0094 16.2 2.2 0.0094 16.2 2.2 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4611) Nop14 PF04147.12 BAM40266.1 - 0.016 13.4 17.1 0.05 11.8 1.9 2.0 2 0 0 2 2 2 0 Nop14-like family MRNIP PF15749.5 BAM40266.1 - 4.7 8.0 10.3 1 10.1 3.2 2.4 2 0 0 2 2 2 0 MRN-interacting protein tRNA-synt_1 PF00133.22 BAM40267.1 - 2.9e-81 273.6 12.5 1e-59 202.4 5.7 3.8 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 BAM40267.1 - 1.6e-18 66.6 3.0 5.5e-07 28.7 0.0 4.4 4 0 0 4 4 4 4 tRNA synthetases class I (M) Anticodon_1 PF08264.13 BAM40267.1 - 2.9e-18 66.3 1.3 1.9e-17 63.6 0.1 2.6 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1_2 PF13603.6 BAM40267.1 - 0.00084 18.9 0.0 0.0023 17.5 0.0 1.7 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 zf-FPG_IleRS PF06827.14 BAM40267.1 - 0.76 9.7 5.5 8 6.4 5.9 2.3 1 1 1 2 2 2 0 Zinc finger found in FPG and IleRS MPC PF03650.13 BAM40268.1 - 1.2e-29 102.6 0.0 2.6e-29 101.6 0.0 1.4 1 0 0 1 1 1 1 Mitochondrial pyruvate carriers U1snRNP70_N PF12220.8 BAM40269.1 - 4.3e-19 68.9 3.9 6.9e-19 68.3 3.9 1.3 1 0 0 1 1 1 1 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal RRM_1 PF00076.22 BAM40269.1 - 7.9e-18 64.0 0.0 1.3e-17 63.4 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 BAM40269.1 - 0.026 14.1 0.0 0.035 13.7 0.0 1.2 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PHM7_cyt PF14703.6 BAM40269.1 - 0.12 12.6 0.5 0.28 11.4 0.5 1.8 1 1 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter RRM_7 PF16367.5 BAM40269.1 - 0.12 12.5 0.0 0.29 11.3 0.0 1.6 1 1 0 1 1 1 0 RNA recognition motif RRM_8 PF11835.8 BAM40269.1 - 0.24 11.6 0.0 0.37 11.0 0.0 1.3 1 0 0 1 1 1 0 RRM-like domain NAD_binding_1 PF00175.21 BAM40270.1 - 3.2e-14 53.5 0.0 8e-14 52.2 0.0 1.7 1 0 0 1 1 1 1 Oxidoreductase NAD-binding domain FAD_binding_6 PF00970.24 BAM40270.1 - 0.00041 20.6 0.1 0.0017 18.6 0.0 2.1 1 1 0 1 1 1 1 Oxidoreductase FAD-binding domain Ras PF00071.22 BAM40271.1 - 1.1e-10 41.4 0.0 6.5e-09 35.6 0.0 2.4 2 1 1 3 3 3 1 Ras family Roc PF08477.13 BAM40271.1 - 0.029 14.6 0.0 0.38 11.0 0.0 2.6 2 1 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA PF00004.29 BAM40271.1 - 0.19 12.2 0.0 0.41 11.1 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TAFII55_N PF04658.13 BAM40272.1 - 3e-21 75.8 0.0 7.9e-21 74.4 0.0 1.7 1 0 0 1 1 1 1 TAFII55 protein conserved region DBR1 PF05011.13 BAM40273.1 - 1.4e-14 54.7 0.0 2.9e-14 53.7 0.0 1.6 1 0 0 1 1 1 1 Lariat debranching enzyme, C-terminal domain Metallophos PF00149.28 BAM40273.1 - 3.1e-10 40.9 1.0 3.1e-10 40.9 1.0 1.7 2 0 0 2 2 2 1 Calcineurin-like phosphoesterase DUF1207 PF06727.11 BAM40273.1 - 0.083 11.8 0.0 0.29 10.0 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1207) FOXO_KIX_bdg PF16675.5 BAM40273.1 - 0.17 12.2 0.0 0.43 10.9 0.0 1.6 1 0 0 1 1 1 0 KIX-binding domain of forkhead box O, CR2 BRX_assoc PF16627.5 BAM40273.1 - 0.38 10.9 2.6 0.69 10.1 1.7 1.9 2 0 0 2 2 2 0 Unstructured region between BRX_N and BRX domain SIP1 PF04938.12 BAM40274.1 - 2.5e-14 53.5 0.7 1e-13 51.6 0.7 1.9 1 1 0 1 1 1 1 Survival motor neuron (SMN) interacting protein 1 (SIP1) Nop PF01798.18 BAM40275.1 - 8.7e-81 270.8 0.1 1.2e-80 270.3 0.1 1.2 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin NOP5NT PF08156.13 BAM40275.1 - 8.2e-16 58.1 0.1 1.9e-15 57.0 0.1 1.7 1 0 0 1 1 1 1 NOP5NT (NUC127) domain DUF1180 PF06679.12 BAM40276.1 - 0.45 10.9 3.0 0.55 10.6 3.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) Homeobox_KN PF05920.11 BAM40278.1 - 0.14 12.1 0.4 0.22 11.5 0.4 1.5 1 1 0 1 1 1 0 Homeobox KN domain TMEM154 PF15102.6 BAM40279.1 - 0.0018 18.2 0.0 0.0023 17.8 0.0 1.2 1 0 0 1 1 1 1 TMEM154 protein family SecE PF00584.20 BAM40279.1 - 0.003 17.4 4.5 0.003 17.4 4.5 2.0 2 0 0 2 2 2 1 SecE/Sec61-gamma subunits of protein translocation complex DUF4448 PF14610.6 BAM40279.1 - 0.018 14.8 0.1 0.027 14.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4448) RAMP4 PF06624.12 BAM40279.1 - 0.045 13.8 2.1 0.093 12.8 2.1 1.5 1 0 0 1 1 1 0 Ribosome associated membrane protein RAMP4 DUF4366 PF14283.6 BAM40282.1 - 0.067 13.2 0.0 0.15 12.1 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4366) LSR PF05624.14 BAM40282.1 - 0.25 11.3 5.2 14 5.8 3.3 2.3 2 0 0 2 2 2 0 Lipolysis stimulated receptor (LSR) RNA_polI_A14 PF08203.11 BAM40283.1 - 0.15 12.8 0.4 0.84 10.4 0.2 2.3 3 0 0 3 3 3 0 Yeast RNA polymerase I subunit RPA14 Sulfate_transp PF00916.20 BAM40284.1 - 7.2e-23 81.0 33.0 3e-22 78.9 30.0 2.4 1 1 0 1 1 1 1 Sulfate permease family Herpes_U55 PF06501.11 BAM40284.1 - 0.00043 19.2 0.1 0.00074 18.4 0.1 1.3 1 0 0 1 1 1 1 Human herpesvirus U55 protein STAS PF01740.21 BAM40284.1 - 0.0067 16.1 0.0 0.013 15.1 0.0 1.4 1 0 0 1 1 1 1 STAS domain SNRNP27 PF08648.12 BAM40287.1 - 1.9e-27 95.1 0.8 1.9e-27 95.1 0.8 2.1 2 0 0 2 2 2 1 U4/U6.U5 small nuclear ribonucleoproteins DUF21 PF01595.20 BAM40289.1 - 7.5e-37 126.7 2.2 1.4e-36 125.8 2.2 1.4 1 0 0 1 1 1 1 Cyclin M transmembrane N-terminal domain CBS PF00571.28 BAM40289.1 - 0.0073 16.7 3.5 2.4 8.7 0.1 2.9 3 0 0 3 3 3 2 CBS domain Profilin PF00235.19 BAM40290.1 - 9.4e-19 67.9 0.0 1.3e-18 67.5 0.0 1.2 1 0 0 1 1 1 1 Profilin DUF1064 PF06356.11 BAM40290.1 - 0.053 13.9 0.0 0.078 13.3 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1064) Methyltr_RsmB-F PF01189.17 BAM40291.1 - 1.2e-68 230.8 0.4 2.2e-68 229.9 0.0 1.6 2 0 0 2 2 2 1 16S rRNA methyltransferase RsmB/F Methyltr_RsmF_N PF17125.5 BAM40291.1 - 2e-09 37.8 0.0 5.8e-09 36.3 0.0 1.8 1 0 0 1 1 1 1 N-terminal domain of 16S rRNA methyltransferase RsmF FtsJ PF01728.19 BAM40291.1 - 4.5e-07 30.2 0.0 8.2e-07 29.3 0.0 1.5 1 0 0 1 1 1 1 FtsJ-like methyltransferase Met_10 PF02475.16 BAM40291.1 - 0.008 15.9 0.0 0.018 14.8 0.0 1.5 1 0 0 1 1 1 1 Met-10+ like-protein IHABP4_N PF16174.5 BAM40291.1 - 3.5 8.2 16.2 7 7.2 16.2 1.4 1 0 0 1 1 1 0 Intracellular hyaluronan-binding protein 4 N-terminal Ras PF00071.22 BAM40292.1 - 9.1e-44 148.9 0.0 2.7e-42 144.1 0.0 2.1 2 0 0 2 2 2 1 Ras family Roc PF08477.13 BAM40292.1 - 1.1e-24 86.9 0.3 1.1e-22 80.5 0.0 2.3 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 BAM40292.1 - 1.2e-10 41.2 0.0 2.1e-10 40.3 0.0 1.4 1 0 0 1 1 1 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 BAM40292.1 - 2e-05 24.3 0.0 3e-05 23.7 0.0 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain Proteasome PF00227.26 BAM40293.1 - 4.7e-39 133.9 0.2 1.1e-19 70.6 0.0 2.1 2 0 0 2 2 2 2 Proteasome subunit Rhomboid PF01694.22 BAM40295.1 - 6.3e-22 78.2 11.6 6.3e-22 78.2 11.6 1.6 2 0 0 2 2 2 1 Rhomboid family Peptidase_S8 PF00082.22 BAM40296.1 - 3.2e-22 79.2 0.0 4.3e-22 78.7 0.0 1.2 1 0 0 1 1 1 1 Subtilase family SUB1_ProdP9 PF18213.1 BAM40296.1 - 0.018 14.8 0.0 0.041 13.7 0.0 1.6 1 0 0 1 1 1 0 SUB1 protease Prodomain ProdP9 NPL4 PF05021.15 BAM40297.1 - 1.8e-27 96.5 2.8 1.9e-23 83.3 2.8 3.3 1 1 0 1 1 1 1 NPL4 family UN_NPL4 PF11543.8 BAM40297.1 - 7.9e-14 51.9 0.2 2.4e-13 50.3 0.2 1.9 1 0 0 1 1 1 1 Nuclear pore localisation protein NPL4 zf-NPL4 PF05020.15 BAM40297.1 - 8.4e-05 22.8 0.0 0.00025 21.2 0.0 1.8 1 0 0 1 1 1 1 NPL4 family, putative zinc binding region BCL_N PF04714.13 BAM40297.1 - 0.1 12.7 0.1 0.36 10.9 0.1 1.9 1 0 0 1 1 1 0 BCL7, N-terminal conserver region Ala_racemase_N PF01168.20 BAM40298.1 - 2.9e-08 33.6 0.0 3.6e-08 33.3 0.0 1.1 1 0 0 1 1 1 1 Alanine racemase, N-terminal domain Rhomboid PF01694.22 BAM40299.1 - 1.6e-16 60.7 8.7 3.1e-16 59.7 8.7 1.5 1 0 0 1 1 1 1 Rhomboid family L51_S25_CI-B8 PF05047.16 BAM40300.1 - 0.082 12.8 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain Ribosomal_L4 PF00573.22 BAM40301.1 - 3.2e-40 137.9 0.7 3.2e-40 137.9 0.7 1.6 2 0 0 2 2 2 1 Ribosomal protein L4/L1 family Ribos_L4_asso_C PF14374.6 BAM40301.1 - 0.00089 19.3 0.4 0.0029 17.6 0.4 1.9 1 1 0 1 1 1 1 60S ribosomal protein L4 C-terminal domain Xpo1 PF08389.12 BAM40303.1 - 1e-06 28.9 6.8 5e-05 23.4 0.2 4.0 3 1 0 3 3 3 2 Exportin 1-like protein FNIP_M PF14637.6 BAM40303.1 - 0.016 15.3 5.0 1.9 8.5 0.2 3.1 3 0 0 3 3 3 0 Folliculin-interacting protein middle domain Dehalogenase PF13486.6 BAM40303.1 - 0.21 11.0 0.0 1.3 8.3 0.0 2.0 2 0 0 2 2 2 0 Reductive dehalogenase subunit Gemini_mov PF01708.16 BAM40306.1 - 0.034 13.9 0.0 0.064 13.0 0.0 1.4 1 0 0 1 1 1 0 Geminivirus putative movement protein Guanylate_kin PF00625.21 BAM40307.1 - 5.5e-49 166.3 0.0 6.4e-49 166.1 0.0 1.0 1 0 0 1 1 1 1 Guanylate kinase AAA_33 PF13671.6 BAM40307.1 - 7.2e-05 23.0 0.0 0.012 15.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 BAM40307.1 - 0.00015 22.3 0.2 0.00035 21.1 0.2 1.6 1 1 0 1 1 1 1 AAA domain AAA_23 PF13476.6 BAM40307.1 - 0.00019 22.0 1.5 0.00075 20.1 0.0 2.1 2 1 0 2 2 2 1 AAA domain AAA_16 PF13191.6 BAM40307.1 - 0.0011 19.4 0.1 0.0034 17.8 0.0 1.8 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 BAM40307.1 - 0.0024 18.1 0.0 0.004 17.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain RsgA_GTPase PF03193.16 BAM40307.1 - 0.0029 17.5 0.0 0.011 15.6 0.0 1.8 2 0 0 2 2 2 1 RsgA GTPase ABC_tran PF00005.27 BAM40307.1 - 0.0034 17.9 0.1 0.0047 17.4 0.1 1.6 1 1 0 1 1 1 1 ABC transporter AAA_29 PF13555.6 BAM40307.1 - 0.0052 16.5 0.0 0.0096 15.6 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain Muted PF14942.6 BAM40307.1 - 0.0061 16.9 0.1 1.1 9.6 0.0 2.1 2 0 0 2 2 2 1 Organelle biogenesis, Muted-like protein SRPRB PF09439.10 BAM40307.1 - 0.0095 15.4 0.0 0.017 14.5 0.0 1.4 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit ATPase_2 PF01637.18 BAM40307.1 - 0.012 15.5 0.1 0.039 13.8 0.0 1.6 2 1 0 2 2 2 0 ATPase domain predominantly from Archaea GTP_EFTU PF00009.27 BAM40307.1 - 0.013 15.1 0.0 0.024 14.2 0.0 1.6 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain AAA_28 PF13521.6 BAM40307.1 - 0.018 15.3 0.0 0.036 14.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain cobW PF02492.19 BAM40307.1 - 0.02 14.5 0.0 0.045 13.4 0.0 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain Rad17 PF03215.15 BAM40307.1 - 0.024 14.6 0.0 0.033 14.1 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain MSV199 PF10553.9 BAM40307.1 - 0.027 14.7 0.5 0.24 11.6 0.0 2.0 2 0 0 2 2 2 0 MSV199 domain EFP PF01132.20 BAM40307.1 - 0.031 14.3 0.4 0.064 13.3 0.4 1.5 1 0 0 1 1 1 0 Elongation factor P (EF-P) OB domain AAA_14 PF13173.6 BAM40307.1 - 0.036 14.1 0.0 0.084 12.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 BAM40307.1 - 0.036 14.0 0.0 0.068 13.1 0.0 1.4 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B Roc PF08477.13 BAM40307.1 - 0.038 14.2 0.0 0.077 13.2 0.0 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase NACHT PF05729.12 BAM40307.1 - 0.047 13.6 0.0 0.1 12.5 0.0 1.5 2 0 0 2 2 2 0 NACHT domain NB-ARC PF00931.22 BAM40307.1 - 0.065 12.4 0.0 0.12 11.6 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain RNA_helicase PF00910.22 BAM40307.1 - 0.077 13.4 0.0 0.14 12.6 0.0 1.6 1 1 0 1 1 1 0 RNA helicase SMC_N PF02463.19 BAM40307.1 - 0.13 11.7 0.1 0.44 9.9 0.0 1.8 1 1 1 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_24 PF13479.6 BAM40307.1 - 0.15 11.8 0.0 0.26 11.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 BAM40307.1 - 0.19 11.4 0.0 0.26 11.0 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.6 BAM40307.1 - 0.28 11.0 1.6 0.38 10.5 0.1 1.8 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system PFK PF00365.20 BAM40308.1 - 1.5e-60 205.0 0.1 1e-34 120.2 0.0 3.6 3 1 0 3 3 3 2 Phosphofructokinase polyprenyl_synt PF00348.17 BAM40308.1 - 0.11 11.5 0.0 2.3 7.2 0.0 2.3 2 0 0 2 2 2 0 Polyprenyl synthetase UBM PF14377.6 BAM40308.1 - 0.23 11.0 0.4 11 5.7 0.0 2.4 2 0 0 2 2 2 0 Ubiquitin binding region Inhibitor_I78 PF11720.8 BAM40309.1 - 0.14 12.2 0.0 7.4 6.7 0.0 2.9 2 0 0 2 2 2 0 Peptidase inhibitor I78 family Pro_isomerase PF00160.21 BAM40311.1 - 6.4e-48 163.0 0.0 1.2e-47 162.1 0.0 1.4 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Rtf2 PF04641.12 BAM40311.1 - 2e-05 24.1 0.5 9.9e-05 21.8 0.0 2.2 2 1 1 3 3 3 1 Rtf2 RING-finger zf-Nse PF11789.8 BAM40311.1 - 0.0075 16.1 0.0 0.053 13.3 0.0 2.4 2 1 1 3 3 3 1 Zinc-finger of the MIZ type in Nse subunit U-box PF04564.15 BAM40311.1 - 0.012 15.8 0.0 0.058 13.6 0.0 2.1 2 0 0 2 2 2 0 U-box domain SseC PF04888.12 BAM40314.1 - 0.19 11.3 0.1 0.34 10.5 0.1 1.3 1 0 0 1 1 1 0 Secretion system effector C (SseC) like family CK_II_beta PF01214.18 BAM40315.1 - 1.8e-60 203.8 0.0 2.3e-60 203.5 0.0 1.1 1 0 0 1 1 1 1 Casein kinase II regulatory subunit Zn_Tnp_IS1 PF03811.13 BAM40315.1 - 0.092 12.5 2.4 0.14 11.9 0.2 2.2 2 0 0 2 2 2 0 InsA N-terminal domain Couple_hipA PF13657.6 BAM40316.1 - 0.17 12.5 0.0 0.29 11.8 0.0 1.4 1 0 0 1 1 1 0 HipA N-terminal domain PseudoU_synth_2 PF00849.22 BAM40317.1 - 0.0096 16.0 0.0 0.011 15.8 0.0 1.2 1 0 0 1 1 1 1 RNA pseudouridylate synthase DUF4596 PF15363.6 BAM40317.1 - 0.047 13.9 0.4 0.81 10.0 0.3 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4596) RNase_H2_suC PF08615.11 BAM40318.1 - 2.7e-12 47.0 0.0 3.8e-12 46.6 0.0 1.2 1 0 0 1 1 1 1 Ribonuclease H2 non-catalytic subunit (Ylr154p-like) AbiJ_NTD5 PF18865.1 BAM40319.1 - 0.02 14.7 1.6 1.8 8.4 0.0 3.8 4 0 0 4 4 4 0 AbiJ N-terminal domain 5 TLD PF07534.16 BAM40320.1 - 6.9e-33 113.8 1.3 1.3e-32 112.9 1.3 1.5 1 0 0 1 1 1 1 TLD DUF1180 PF06679.12 BAM40321.1 - 0.18 12.2 0.0 0.34 11.3 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) CitMHS PF03600.16 BAM40322.1 - 2.2 7.4 5.4 1.4 8.1 2.7 1.9 2 0 0 2 2 2 0 Citrate transporter PPP4R2 PF09184.11 BAM40323.1 - 0.00052 19.7 0.4 0.0011 18.6 0.4 1.6 1 1 0 1 1 1 1 PPP4R2 DUF5600 PF18150.1 BAM40323.1 - 0.011 16.3 0.2 5.6 7.6 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5600) NopRA1 PF16201.5 BAM40324.1 - 0.0023 17.5 1.4 0.017 14.7 0.2 3.0 2 0 0 2 2 2 1 Nucleolar pre-ribosomal-associated protein 1 RAP PF08373.10 BAM40324.1 - 0.025 14.7 2.1 0.051 13.7 0.1 2.5 2 0 0 2 2 2 0 RAP domain G3P_antiterm PF04309.12 BAM40324.1 - 0.11 11.9 0.0 0.27 10.6 0.0 1.6 1 0 0 1 1 1 0 Glycerol-3-phosphate responsive antiterminator DUF3730 PF12530.8 BAM40324.1 - 0.12 11.9 3.7 0.14 11.7 0.7 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF3730) Nop PF01798.18 BAM40325.1 - 5.6e-60 202.7 0.7 8.2e-60 202.1 0.7 1.3 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin Prp31_C PF09785.9 BAM40325.1 - 7.3e-34 117.3 0.5 1.3e-33 116.4 0.5 1.5 1 0 0 1 1 1 1 Prp31 C terminal domain Nro1 PF12753.7 BAM40325.1 - 0.012 14.6 0.0 0.021 13.8 0.0 1.4 1 0 0 1 1 1 0 Nuclear pore complex subunit Nro1 ubiquitin PF00240.23 BAM40326.1 - 3.2e-18 65.3 0.6 2.3e-17 62.5 0.6 1.9 1 1 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 BAM40326.1 - 3.5e-10 39.6 0.1 3.4e-09 36.4 0.1 1.9 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Rad60-SLD_2 PF13881.6 BAM40326.1 - 5.1e-05 23.4 0.0 8.9e-05 22.6 0.0 1.4 1 1 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 BAM40326.1 - 0.0067 16.9 0.0 0.012 16.0 0.0 1.4 1 1 0 1 1 1 1 Ubiquitin-like domain DUF2407 PF10302.9 BAM40326.1 - 0.0071 16.9 0.0 0.0098 16.4 0.0 1.3 1 0 0 1 1 1 1 DUF2407 ubiquitin-like domain Ubiquitin_5 PF18037.1 BAM40326.1 - 0.037 14.4 0.0 0.054 13.8 0.0 1.3 1 0 0 1 1 1 0 Ubiquitin-like domain Pro_isomerase PF00160.21 BAM40327.1 - 2.4e-42 144.9 0.0 4.4e-42 144.0 0.0 1.5 1 0 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DUF1974 PF09317.11 BAM40327.1 - 0.15 11.6 5.1 0.23 11.0 5.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1974) Ubiquitin_2 PF14560.6 BAM40328.1 - 2.3e-06 28.0 0.3 6.3e-06 26.6 0.3 1.8 1 0 0 1 1 1 1 Ubiquitin-like domain LRR_4 PF12799.7 BAM40328.1 - 2.4e-06 27.8 42.7 0.00083 19.7 3.3 7.0 8 1 1 9 9 9 4 Leucine Rich repeats (2 copies) LRR_6 PF13516.6 BAM40328.1 - 0.00015 21.6 0.3 3 8.1 0.0 4.9 4 0 0 4 4 4 1 Leucine Rich repeat ubiquitin PF00240.23 BAM40328.1 - 0.0083 15.9 0.1 0.024 14.4 0.1 1.8 1 1 0 1 1 1 1 Ubiquitin family LRR_8 PF13855.6 BAM40328.1 - 0.19 11.5 35.1 0.15 11.8 1.8 6.4 4 2 3 7 7 7 0 Leucine rich repeat PCNA_N PF00705.18 BAM40329.1 - 8.6e-26 90.1 1.2 1.3e-25 89.6 0.7 1.6 1 1 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 BAM40329.1 - 5.9e-19 68.5 0.3 1.8e-17 63.7 0.1 2.3 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.13 BAM40329.1 - 9.2e-08 31.8 0.4 6.7e-07 29.0 0.4 2.1 1 1 0 1 1 1 1 Rad9 Rad1 PF02144.16 BAM40329.1 - 0.0014 17.8 4.6 0.089 11.8 4.4 2.6 1 1 1 2 2 2 2 Repair protein Rad1/Rec1/Rad17 DNA_pol3_beta_2 PF02767.16 BAM40329.1 - 0.088 13.0 0.0 0.32 11.2 0.0 2.0 2 0 0 2 2 2 0 DNA polymerase III beta subunit, central domain LRRNT PF01462.18 BAM40329.1 - 0.16 11.6 2.1 1.4 8.6 0.1 2.4 2 0 0 2 2 2 0 Leucine rich repeat N-terminal domain Thioredoxin PF00085.20 BAM40332.1 - 1.8e-26 92.1 0.0 2.6e-26 91.6 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 BAM40332.1 - 4.7e-05 23.8 0.1 0.00024 21.5 0.1 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain OST3_OST6 PF04756.13 BAM40332.1 - 4.8e-05 22.8 0.1 0.00012 21.5 0.1 1.7 1 1 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_6 PF13848.6 BAM40332.1 - 0.00011 22.2 0.0 0.00017 21.6 0.0 1.5 1 1 0 1 1 1 1 Thioredoxin-like domain TraF PF13728.6 BAM40332.1 - 0.00016 21.6 0.0 0.00023 21.1 0.0 1.1 1 0 0 1 1 1 1 F plasmid transfer operon protein Thioredoxin_8 PF13905.6 BAM40332.1 - 0.00037 20.8 0.0 0.14 12.5 0.0 2.3 1 1 1 2 2 2 2 Thioredoxin-like Thioredoxin_3 PF13192.6 BAM40332.1 - 0.0028 17.7 0.0 0.0047 16.9 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin domain Thioredoxin_7 PF13899.6 BAM40332.1 - 0.016 15.4 0.0 0.029 14.5 0.0 1.4 1 0 0 1 1 1 0 Thioredoxin-like TrbC_Ftype PF09673.10 BAM40332.1 - 0.022 14.8 0.0 0.035 14.2 0.0 1.3 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin assembly protein ERp29_N PF07912.13 BAM40332.1 - 0.034 14.3 0.0 0.058 13.5 0.0 1.4 1 1 0 1 1 1 0 ERp29, N-terminal domain Thioredoxin_9 PF14595.6 BAM40332.1 - 0.035 13.9 0.0 0.048 13.4 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin AhpC-TSA PF00578.21 BAM40332.1 - 0.056 13.4 0.0 0.091 12.7 0.0 1.4 1 0 0 1 1 1 0 AhpC/TSA family KaiB PF07689.12 BAM40332.1 - 0.11 12.2 0.0 0.22 11.3 0.0 1.4 1 0 0 1 1 1 0 KaiB domain DIM1 PF02966.16 BAM40332.1 - 0.16 11.7 0.0 0.26 11.1 0.0 1.4 1 0 0 1 1 1 0 Mitosis protein DIM1 DUF4229 PF14012.6 BAM40332.1 - 0.4 10.8 3.5 1 9.5 3.3 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF4229) MMR_HSR1 PF01926.23 BAM40334.1 - 2.2e-07 30.9 1.0 0.001 19.1 0.0 3.0 3 0 0 3 3 3 2 50S ribosome-binding GTPase AAA_29 PF13555.6 BAM40334.1 - 1.5e-05 24.6 0.0 4.3e-05 23.2 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 BAM40334.1 - 0.00013 22.0 0.4 0.00057 19.8 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase AAA_23 PF13476.6 BAM40334.1 - 0.00016 22.2 0.2 0.00016 22.2 0.2 2.9 2 1 0 2 2 1 1 AAA domain GTP_EFTU PF00009.27 BAM40334.1 - 0.00021 20.9 0.2 0.45 10.0 0.0 2.6 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain AAA_15 PF13175.6 BAM40334.1 - 0.00075 19.3 0.4 0.00075 19.3 0.4 3.1 2 1 0 2 2 1 1 AAA ATPase domain T2SSE PF00437.20 BAM40334.1 - 0.00081 18.5 0.0 0.0017 17.5 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein G-alpha PF00503.20 BAM40334.1 - 0.0031 16.7 1.1 0.0062 15.7 0.1 2.0 2 0 0 2 2 2 1 G-protein alpha subunit AAA_16 PF13191.6 BAM40334.1 - 0.0035 17.7 0.0 0.14 12.6 0.0 2.5 2 1 0 2 2 2 1 AAA ATPase domain ABC_tran PF00005.27 BAM40334.1 - 0.018 15.6 0.3 0.05 14.1 0.0 1.9 2 0 0 2 2 1 0 ABC transporter AAA_21 PF13304.6 BAM40334.1 - 0.044 13.6 0.1 0.044 13.6 0.1 1.8 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_7 PF12775.7 BAM40334.1 - 0.056 13.0 0.0 0.13 11.8 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region CTU2 PF10288.9 BAM40334.1 - 0.086 13.1 1.2 0.22 11.8 1.2 1.7 1 0 0 1 1 1 0 Cytoplasmic tRNA 2-thiolation protein 2 Mg_chelatase PF01078.21 BAM40334.1 - 0.099 12.0 0.0 0.18 11.1 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI RNA_helicase PF00910.22 BAM40334.1 - 0.12 12.8 0.0 0.44 10.9 0.0 2.0 1 0 0 1 1 1 0 RNA helicase PduV-EutP PF10662.9 BAM40334.1 - 0.13 12.0 0.1 2.4 7.9 0.0 3.0 4 0 0 4 4 4 0 Ethanolamine utilisation - propanediol utilisation ATPase_2 PF01637.18 BAM40334.1 - 0.13 12.1 0.0 0.13 12.1 0.0 2.1 3 0 0 3 3 2 0 ATPase domain predominantly from Archaea Dynamin_N PF00350.23 BAM40334.1 - 0.33 11.0 0.0 0.33 11.0 0.0 2.6 4 0 0 4 4 4 0 Dynamin family MMR_HSR1_Xtn PF16897.5 BAM40334.1 - 0.37 10.8 3.4 0.51 10.4 0.0 2.9 3 0 0 3 3 3 0 C-terminal region of MMR_HSR1 domain NPHI_C PF08469.10 BAM40334.1 - 0.62 10.0 3.5 9.9 6.1 0.8 2.7 2 0 0 2 2 2 0 Nucleoside triphosphatase I C-terminal SRPRB PF09439.10 BAM40334.1 - 2.5 7.5 6.7 2.3 7.6 0.0 2.8 3 0 0 3 3 3 0 Signal recognition particle receptor beta subunit PRCC PF10253.9 BAM40335.1 - 2e-15 58.2 20.2 6.2e-15 56.6 20.2 1.7 1 1 0 1 1 1 1 Mitotic checkpoint regulator, MAD2B-interacting DUF4398 PF14346.6 BAM40335.1 - 0.2 12.3 1.9 0.67 10.6 1.9 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4398) Mito_carr PF00153.27 BAM40336.1 - 5.4e-55 183.3 2.6 1.9e-22 79.0 0.1 4.8 3 1 1 4 4 4 4 Mitochondrial carrier protein eIF3_subunit PF08597.10 BAM40336.1 - 0.29 11.0 1.2 0.49 10.3 1.2 1.2 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit Period_C PF12114.8 BAM40336.1 - 8 6.0 8.6 1.8 8.1 1.4 2.4 2 0 0 2 2 2 0 Period protein 2/3C-terminal region 14-3-3 PF00244.20 BAM40339.1 - 3.1e-94 314.6 11.3 3.5e-94 314.4 11.3 1.0 1 0 0 1 1 1 1 14-3-3 protein Peptidase_C98 PF15499.6 BAM40339.1 - 0.032 13.7 0.6 0.071 12.6 0.6 1.7 1 1 0 1 1 1 0 Ubiquitin-specific peptidase-like, SUMO isopeptidase TPR_8 PF13181.6 BAM40339.1 - 1.6 9.2 6.3 1.6 9.1 0.2 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_MLP1_2 PF07926.12 BAM40340.1 - 0.019 15.0 0.5 0.032 14.3 0.5 1.3 1 0 0 1 1 1 0 TPR/MLP1/MLP2-like protein DUF4404 PF14357.6 BAM40340.1 - 0.059 14.0 0.2 0.1 13.2 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4404) DUF1664 PF07889.12 BAM40340.1 - 0.083 12.9 0.8 0.24 11.4 0.7 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) Fcf1 PF04900.12 BAM40341.1 - 2e-31 108.3 1.3 2e-31 108.3 1.3 2.5 2 1 0 2 2 2 1 Fcf1 DUF842 PF05811.13 BAM40341.1 - 5e-24 84.5 13.8 1.3e-23 83.1 13.8 1.7 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF842) PIN_9 PF18477.1 BAM40341.1 - 7.2e-10 39.2 4.1 2.2e-08 34.4 0.2 2.9 2 1 0 2 2 2 2 PIN like domain DUF2458 PF10454.9 BAM40341.1 - 0.0091 15.7 0.5 0.022 14.4 0.2 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF2458) Histone PF00125.24 BAM40342.1 - 3.8e-18 66.1 0.0 4.8e-18 65.8 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 Histone_H2A_C PF16211.5 BAM40342.1 - 1.5e-11 43.8 0.1 2.8e-11 42.9 0.1 1.5 1 0 0 1 1 1 1 C-terminus of histone H2A CBFD_NFYB_HMF PF00808.23 BAM40342.1 - 0.00011 22.4 0.0 0.00015 22.0 0.0 1.2 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Hairpins PF04877.12 BAM40342.1 - 0.53 9.9 4.5 0.66 9.6 4.5 1.1 1 0 0 1 1 1 0 HrpZ TRAPP PF04051.16 BAM40343.1 - 8.5e-24 83.9 0.0 1.1e-23 83.6 0.0 1.0 1 0 0 1 1 1 1 Transport protein particle (TRAPP) component DEAD PF00270.29 BAM40344.1 - 3.1e-43 147.6 0.0 4.2e-43 147.1 0.0 1.2 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM40344.1 - 9.3e-28 96.8 0.3 2.1e-27 95.6 0.3 1.6 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 BAM40344.1 - 0.0063 15.8 0.1 0.0096 15.2 0.1 1.2 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase Phostensin_N PF13916.6 BAM40344.1 - 0.2 12.0 0.0 0.37 11.1 0.0 1.4 1 0 0 1 1 1 0 PP1-regulatory protein, Phostensin N-terminal zf-RING_2 PF13639.6 BAM40346.1 - 1e-11 44.9 6.6 1.7e-11 44.3 6.6 1.3 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_2 PF13923.6 BAM40346.1 - 2.3e-09 36.9 5.8 3.9e-09 36.2 5.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 BAM40346.1 - 5.9e-09 35.5 2.4 5.9e-09 35.5 2.4 1.8 2 0 0 2 2 2 1 RING-like zinc finger zf-rbx1 PF12678.7 BAM40346.1 - 3.2e-08 33.8 3.9 5.7e-08 32.9 3.9 1.4 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_5 PF14634.6 BAM40346.1 - 1e-06 28.6 5.4 1.6e-06 27.9 5.4 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_UBOX PF13445.6 BAM40346.1 - 2.4e-06 27.5 1.0 2.4e-06 27.5 1.0 2.1 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 BAM40346.1 - 6.4e-06 25.9 6.9 1.1e-05 25.2 6.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 BAM40346.1 - 0.00042 20.1 3.7 0.00071 19.4 3.7 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 BAM40346.1 - 0.014 15.2 4.3 0.027 14.3 4.3 1.5 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 zf-C3H2C3 PF17122.5 BAM40346.1 - 0.027 14.5 1.8 0.054 13.6 1.8 1.5 1 0 0 1 1 1 0 Zinc-finger zf-ANAPC11 PF12861.7 BAM40346.1 - 0.028 14.5 3.2 0.061 13.4 3.2 1.5 1 1 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-HC5HC2H_2 PF13832.6 BAM40346.1 - 0.052 13.7 0.2 0.088 13.0 0.2 1.3 1 0 0 1 1 1 0 PHD-zinc-finger like domain zf-Nse PF11789.8 BAM40346.1 - 0.098 12.5 2.9 0.22 11.3 2.9 1.6 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit Zn_ribbon_17 PF17120.5 BAM40346.1 - 0.1 12.2 4.0 0.17 11.6 4.0 1.3 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type RINGv PF12906.7 BAM40346.1 - 0.18 12.0 3.8 0.37 11.0 3.8 1.5 1 1 0 1 1 1 0 RING-variant domain zf-P11 PF03854.14 BAM40346.1 - 0.18 11.5 6.3 0.49 10.1 6.3 1.7 1 1 0 1 1 1 0 P-11 zinc finger TSP_1 PF00090.19 BAM40347.1 - 2.7e-05 24.3 0.9 2.7e-05 24.3 0.9 3.1 3 0 0 3 3 3 1 Thrombospondin type 1 domain UDPGT PF00201.18 BAM40347.1 - 0.018 13.9 0.2 0.045 12.6 0.2 1.6 1 0 0 1 1 1 0 UDP-glucoronosyl and UDP-glucosyl transferase CENP-H PF05837.12 BAM40347.1 - 0.29 11.6 3.2 1.4 9.3 0.9 2.7 2 0 0 2 2 2 0 Centromere protein H (CENP-H) Gly-zipper_YMGG PF13441.6 BAM40348.1 - 0.34 10.7 5.2 2 8.2 1.9 2.3 3 0 0 3 3 3 0 YMGG-like Gly-zipper Rick_17kDa_Anti PF05433.15 BAM40348.1 - 0.41 10.5 6.8 2.6 8.0 0.1 2.3 2 0 0 2 2 2 0 Glycine zipper 2TM domain Gly-zipper_Omp PF13488.6 BAM40348.1 - 0.99 9.5 9.4 6 7.0 4.6 2.4 2 0 0 2 2 2 0 Glycine zipper Gly-zipper_OmpA PF13436.6 BAM40348.1 - 1.5 8.7 8.9 1 9.2 5.1 2.1 2 0 0 2 2 2 0 Glycine-zipper domain Bacteriocin_IIc PF10439.9 BAM40348.1 - 6.5 6.9 15.2 12 6.2 0.7 3.1 2 1 1 3 3 3 0 Bacteriocin class II with double-glycine leader peptide TSP_1 PF00090.19 BAM40349.1 - 0.00038 20.6 11.0 0.0064 16.7 1.4 4.1 3 0 0 3 3 3 2 Thrombospondin type 1 domain Ribosomal_L32p PF01783.23 BAM40350.1 - 0.084 13.1 1.4 0.084 13.1 1.4 1.6 2 0 0 2 2 2 0 Ribosomal L32p protein family DnaJ_C PF01556.18 BAM40352.1 - 5.7e-41 140.0 0.1 7.6e-41 139.7 0.1 1.2 1 0 0 1 1 1 1 DnaJ C terminal domain DnaJ PF00226.31 BAM40352.1 - 4.9e-27 93.8 1.3 8.2e-27 93.1 1.3 1.4 1 0 0 1 1 1 1 DnaJ domain Popeye PF04831.13 BAM40352.1 - 0.086 13.0 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Popeye protein conserved region ABM PF03992.16 BAM40353.1 - 0.0015 18.6 0.0 0.0023 18.0 0.0 1.2 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase Leu_Phe_trans PF03588.14 BAM40354.1 - 1.3e-27 96.4 1.0 7.2e-16 58.2 0.0 2.6 3 0 0 3 3 3 2 Leucyl/phenylalanyl-tRNA protein transferase s48_45 PF07422.13 BAM40356.1 - 4.2e-16 59.5 3.3 6.7e-09 36.3 0.1 3.6 4 0 0 4 4 4 2 Sexual stage antigen s48/45 domain Pkinase PF00069.25 BAM40357.1 - 6.2e-40 137.2 0.0 8e-40 136.9 0.0 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM40357.1 - 3.3e-14 52.8 0.0 4.4e-14 52.4 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 BAM40357.1 - 3.2e-05 23.4 0.0 6e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 Kinase-like FTA2 PF13095.6 BAM40357.1 - 0.078 12.6 0.3 8.4 6.0 0.0 2.2 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 KH_8 PF17903.1 BAM40358.1 - 9.2e-33 112.2 0.2 3.9e-32 110.2 0.0 2.1 2 0 0 2 2 2 1 Krr1 KH1 domain KH_1 PF00013.29 BAM40358.1 - 5.3e-05 23.0 0.1 0.00014 21.6 0.1 1.7 1 0 0 1 1 1 1 KH domain Mem_trans PF03547.18 BAM40358.1 - 2.3 6.5 5.9 3.2 6.1 5.9 1.1 1 0 0 1 1 1 0 Membrane transport protein Syntaxin PF00804.25 BAM40359.1 - 0.00027 20.7 12.3 0.0011 18.7 12.3 2.0 1 1 0 1 1 1 1 Syntaxin WXG100 PF06013.12 BAM40359.1 - 0.066 13.5 2.8 0.35 11.1 0.1 3.1 2 2 1 3 3 3 0 Proteins of 100 residues with WXG DUF2935 PF11155.8 BAM40359.1 - 0.13 12.6 7.1 0.31 11.4 2.5 2.4 1 1 1 2 2 2 0 Domain of unknown function (DUF2935) Laminin_II PF06009.12 BAM40359.1 - 0.36 10.8 12.9 9.7 6.2 7.4 3.1 2 1 1 3 3 3 0 Laminin Domain II V-SNARE PF05008.15 BAM40359.1 - 0.43 11.0 8.2 1.9 8.9 0.5 3.5 3 0 0 3 3 3 0 Vesicle transport v-SNARE protein N-terminus CorA PF01544.18 BAM40359.1 - 0.78 9.0 16.0 0.28 10.5 5.8 2.2 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein DASH_Dam1 PF08653.10 BAM40359.1 - 0.89 9.4 4.5 2 8.3 0.4 3.0 3 0 0 3 3 3 0 DASH complex subunit Dam1 DUF2203 PF09969.9 BAM40359.1 - 0.96 10.2 7.0 2.4 8.9 0.9 2.7 1 1 2 3 3 3 0 Uncharacterized conserved protein (DUF2203) Cob_adeno_trans PF01923.18 BAM40359.1 - 1.4 9.0 5.7 4.1 7.5 0.8 2.6 1 1 2 3 3 3 0 Cobalamin adenosyltransferase Baculo_PEP_C PF04513.12 BAM40359.1 - 1.6 8.8 9.5 1.3 9.1 2.9 2.9 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus Med4 PF10018.9 BAM40359.1 - 1.9 8.1 11.3 1.3 8.7 3.1 2.7 3 0 0 3 3 3 0 Vitamin-D-receptor interacting Mediator subunit 4 XhlA PF10779.9 BAM40359.1 - 5.7 7.2 7.6 10 6.4 0.5 3.3 3 0 0 3 3 3 0 Haemolysin XhlA Ribosomal_L22 PF00237.19 BAM40360.1 - 8.5e-12 45.2 0.1 2e-11 44.1 0.0 1.6 2 0 0 2 2 2 1 Ribosomal protein L22p/L17e Na_H_Exchanger PF00999.21 BAM40361.1 - 6.9e-30 104.1 43.6 9.3e-30 103.7 43.6 1.1 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family SLIDE PF09111.10 BAM40361.1 - 0.01 15.9 4.9 0.88 9.6 0.2 3.0 3 0 0 3 3 3 0 SLIDE SF3A2 PF16835.5 BAM40362.1 - 9.2e-32 109.3 0.0 1.3e-31 108.8 0.0 1.2 1 0 0 1 1 1 1 Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) CactinC_cactus PF09732.9 BAM40362.1 - 0.0017 18.3 0.5 0.0022 17.9 0.5 1.2 1 0 0 1 1 1 1 Cactus-binding C-terminus of cactin protein DnaJ PF00226.31 BAM40363.1 - 1.9e-21 75.9 1.0 5e-21 74.6 1.0 1.8 1 0 0 1 1 1 1 DnaJ domain Thioredoxin PF00085.20 BAM40363.1 - 3.9e-06 26.8 0.0 9.8e-06 25.5 0.0 1.7 1 0 0 1 1 1 1 Thioredoxin NAR PF16251.5 BAM40363.1 - 0.066 13.9 0.1 0.23 12.1 0.1 1.9 1 0 0 1 1 1 0 Nucleic acid-binding domain (NAR) NTP_transferase PF00483.23 BAM40364.1 - 1e-46 159.5 0.0 1.4e-46 159.1 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 BAM40364.1 - 2.8e-09 36.3 3.3 2.8e-09 36.3 3.3 2.0 2 0 0 2 2 2 1 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 BAM40364.1 - 1.1e-06 29.1 0.0 1.4e-06 28.7 0.0 1.3 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.6 BAM40364.1 - 0.00046 19.9 8.3 0.00046 19.9 8.3 2.1 2 0 0 2 2 2 1 Hexapeptide repeat of succinyl-transferase UQ_con PF00179.26 BAM40365.1 - 5.8e-23 81.1 0.1 6.6e-23 80.9 0.1 1.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 BAM40365.1 - 8.7e-05 22.2 0.0 0.0001 22.0 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic E2 family B UEV PF05743.13 BAM40365.1 - 0.032 14.1 0.1 0.042 13.7 0.1 1.4 1 0 0 1 1 1 0 UEV domain RWD PF05773.22 BAM40365.1 - 0.037 14.3 0.1 0.046 14.0 0.1 1.4 1 1 0 1 1 1 0 RWD domain MACPF PF01823.19 BAM40366.1 - 6.8e-20 72.1 7.5 6.8e-20 72.1 7.5 2.5 1 1 1 2 2 2 2 MAC/Perforin domain Adap_comp_sub PF00928.21 BAM40367.1 - 3.5e-28 98.7 4.6 1.3e-25 90.3 1.9 2.1 1 1 1 2 2 2 2 Adaptor complexes medium subunit family Clat_adaptor_s PF01217.20 BAM40367.1 - 8.2e-07 29.1 1.3 1.8e-06 28.0 1.3 1.6 1 0 0 1 1 1 1 Clathrin adaptor complex small chain DUF1694 PF07997.11 BAM40367.1 - 0.031 14.3 0.2 0.081 13.0 0.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1694) SSrecog PF03531.14 BAM40367.1 - 0.14 12.1 1.6 13 5.7 0.0 3.2 2 1 1 3 3 3 0 Structure-specific recognition protein (SSRP1) DUF3397 PF11877.8 BAM40368.1 - 0.048 13.9 1.1 0.087 13.0 1.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3397) DUF4525 PF15027.6 BAM40368.1 - 0.078 12.7 0.1 0.17 11.6 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4525) DUF5383 PF17355.2 BAM40368.1 - 0.1 13.0 7.2 2.2 8.6 0.6 3.1 3 0 0 3 3 3 0 Family of unknown function (DUF5383) Insulin_TMD PF17870.1 BAM40368.1 - 0.15 12.1 0.0 0.33 11.1 0.0 1.5 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment DUF1279 PF06916.13 BAM40370.1 - 1.4e-08 35.2 2.3 1.4e-08 35.2 2.3 1.9 2 0 0 2 2 2 1 Protein of unknown function (DUF1279) DUF3270 PF11674.8 BAM40370.1 - 0.0043 17.2 0.3 0.0043 17.2 0.3 2.8 2 1 1 3 3 3 1 Protein of unknown function (DUF3270) UPF0449 PF15136.6 BAM40370.1 - 5.3 7.6 7.9 2.5 8.6 1.3 2.5 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 DUF3395 PF11875.8 BAM40371.1 - 6e-22 78.2 0.0 8.2e-22 77.8 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3395) DnaJ PF00226.31 BAM40371.1 - 1.9e-15 56.7 2.2 3.9e-15 55.7 2.2 1.6 1 0 0 1 1 1 1 DnaJ domain FPL PF09758.9 BAM40372.1 - 1.8e-46 157.8 3.9 1.8e-46 157.8 3.9 2.4 3 0 0 3 3 3 1 Uncharacterised conserved protein Ribosomal_L27 PF01016.19 BAM40373.1 - 1.3e-10 41.2 0.3 8.9e-10 38.5 0.3 2.0 1 1 0 1 1 1 1 Ribosomal L27 protein Abhydrolase_1 PF00561.20 BAM40374.1 - 3e-20 73.0 0.0 3.7e-14 53.0 0.0 2.1 2 0 0 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 BAM40374.1 - 5.4e-19 68.4 0.0 1.9e-18 66.6 0.0 1.8 1 1 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 BAM40374.1 - 1.3e-11 45.6 0.0 1.1e-09 39.2 0.0 2.1 2 0 0 2 2 2 1 Alpha/beta hydrolase family FSH1 PF03959.13 BAM40374.1 - 3.8e-05 23.4 0.0 0.0032 17.2 0.0 2.9 2 1 0 2 2 2 1 Serine hydrolase (FSH1) Abhydrolase_4 PF08386.10 BAM40374.1 - 0.013 15.6 0.0 0.026 14.6 0.0 1.4 1 0 0 1 1 1 0 TAP-like protein Ndr PF03096.14 BAM40374.1 - 0.025 13.3 0.1 0.068 11.9 0.1 1.7 1 1 0 1 1 1 0 Ndr family DUF1057 PF06342.12 BAM40374.1 - 0.06 12.4 0.0 0.9 8.5 0.0 2.2 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF1057) Peptidase_S9 PF00326.21 BAM40374.1 - 0.21 11.0 0.0 22 4.4 0.0 2.4 2 1 0 2 2 2 0 Prolyl oligopeptidase family Baculo_PEP_C PF04513.12 BAM40375.1 - 0.008 16.2 0.6 0.018 15.1 0.6 1.5 1 0 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus AIP3 PF03915.13 BAM40375.1 - 0.031 13.4 0.7 0.078 12.1 0.1 1.8 2 0 0 2 2 2 0 Actin interacting protein 3 Syntaxin-6_N PF09177.11 BAM40375.1 - 0.062 13.9 1.0 0.62 10.7 0.3 2.6 1 1 1 2 2 2 0 Syntaxin 6, N-terminal RasGEF_N PF00618.20 BAM40375.1 - 0.62 10.3 4.0 2.2 8.6 4.0 1.9 1 1 0 1 1 1 0 RasGEF N-terminal motif Choline_kinase PF01633.20 BAM40377.1 - 5.4e-33 114.4 1.9 5.4e-33 114.4 1.9 1.5 2 0 0 2 2 2 1 Choline/ethanolamine kinase APH PF01636.23 BAM40377.1 - 4.3e-10 39.9 0.0 6e-10 39.5 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Chal_sti_synt_N PF00195.19 BAM40377.1 - 0.24 10.8 0.0 0.43 10.0 0.0 1.3 1 0 0 1 1 1 0 Chalcone and stilbene synthases, N-terminal domain Choline_kinase PF01633.20 BAM40378.1 - 2.6e-33 115.4 1.9 4.6e-33 114.6 1.9 1.3 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 BAM40378.1 - 3.3e-10 40.3 0.0 4.7e-10 39.8 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Chal_sti_synt_N PF00195.19 BAM40378.1 - 0.23 10.9 0.0 0.43 10.0 0.0 1.4 1 0 0 1 1 1 0 Chalcone and stilbene synthases, N-terminal domain AdoHcyase PF05221.17 BAM40379.1 - 3.6e-75 252.9 0.0 4.5e-75 252.6 0.0 1.0 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 BAM40379.1 - 2e-48 164.5 0.9 3e-48 164.0 0.9 1.2 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 BAM40379.1 - 7.3e-06 25.5 0.2 1.5e-05 24.4 0.2 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THF_DHG_CYH_C PF02882.19 BAM40379.1 - 0.0031 16.8 0.5 0.017 14.4 0.5 1.9 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IlvN PF07991.12 BAM40379.1 - 0.032 13.8 0.0 0.051 13.2 0.0 1.3 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain TrkA_N PF02254.18 BAM40379.1 - 0.13 12.5 0.2 0.36 11.1 0.2 1.8 1 1 0 1 1 1 0 TrkA-N domain Adaptin_binding PF10199.9 BAM40380.1 - 0.01 16.4 0.5 0.015 15.9 0.5 1.3 1 0 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 Choline_kinase PF01633.20 BAM40381.1 - 0.0001 22.0 0.0 0.00015 21.4 0.0 1.3 1 1 0 1 1 1 1 Choline/ethanolamine kinase Chal_sti_synt_N PF00195.19 BAM40381.1 - 0.046 13.1 0.0 0.049 13.0 0.0 1.1 1 0 0 1 1 1 0 Chalcone and stilbene synthases, N-terminal domain Choline_kinase PF01633.20 BAM40382.1 - 2.2e-34 118.9 1.5 3.4e-34 118.3 1.5 1.3 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 BAM40382.1 - 2.5e-10 40.7 0.0 3.7e-10 40.2 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Chal_sti_synt_N PF00195.19 BAM40382.1 - 0.24 10.8 0.0 0.43 10.0 0.0 1.3 1 0 0 1 1 1 0 Chalcone and stilbene synthases, N-terminal domain Choline_kinase PF01633.20 BAM40383.1 - 4.1e-34 118.0 0.5 6e-34 117.5 0.5 1.2 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 BAM40383.1 - 9.3e-09 35.6 0.0 1.3e-08 35.1 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family Chal_sti_synt_N PF00195.19 BAM40383.1 - 0.24 10.8 0.0 0.44 9.9 0.0 1.4 1 0 0 1 1 1 0 Chalcone and stilbene synthases, N-terminal domain Choline_kinase PF01633.20 BAM40385.1 - 3.7e-29 101.8 0.4 5.7e-29 101.2 0.4 1.2 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 BAM40385.1 - 3.8e-08 33.6 0.0 7.2e-08 32.6 0.0 1.4 1 0 0 1 1 1 1 Phosphotransferase enzyme family Omp28 PF11551.8 BAM40385.1 - 0.08 12.8 0.0 0.26 11.1 0.0 1.8 2 0 0 2 2 2 0 Outer membrane protein Omp28 Choline_kinase PF01633.20 BAM40386.1 - 1.9e-31 109.3 1.1 2.6e-31 108.9 1.1 1.1 1 0 0 1 1 1 1 Choline/ethanolamine kinase APH PF01636.23 BAM40386.1 - 2.5e-11 44.0 0.0 3.4e-11 43.5 0.0 1.1 1 0 0 1 1 1 1 Phosphotransferase enzyme family EcKinase PF02958.20 BAM40386.1 - 0.00095 18.6 0.6 0.0016 17.8 0.6 1.4 1 0 0 1 1 1 1 Ecdysteroid kinase fn3_6 PF17766.1 BAM40387.1 - 0.12 12.5 0.0 0.64 10.2 0.0 2.3 1 0 0 1 1 1 0 Fibronectin type-III domain WD40 PF00400.32 BAM40388.1 - 1.5e-12 47.8 5.7 0.012 16.5 0.2 5.6 5 0 0 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM40388.1 - 2.8e-10 40.3 0.0 0.012 15.9 0.0 4.3 1 1 3 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain Utp13 PF08625.11 BAM40389.1 - 9.7e-18 64.4 3.7 2.5e-17 63.1 3.7 1.8 1 0 0 1 1 1 1 Utp13 specific WD40 associated domain WD40 PF00400.32 BAM40389.1 - 3.9e-15 56.0 13.2 0.0065 17.3 0.0 7.1 7 0 0 7 7 7 5 WD domain, G-beta repeat WD40 PF00400.32 BAM40391.1 - 2.1e-11 44.2 3.4 0.01 16.7 0.0 4.7 5 0 0 5 5 5 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM40391.1 - 3.1e-06 27.4 0.0 1 9.7 0.0 4.0 3 1 2 5 5 5 4 Anaphase-promoting complex subunit 4 WD40 domain Pkinase PF00069.25 BAM40392.1 - 1.3e-55 188.6 0.5 6e-44 150.4 0.2 2.4 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 BAM40392.1 - 3.5e-36 124.8 0.0 2.2e-28 99.3 0.0 2.6 2 0 0 2 2 2 2 Protein tyrosine kinase Pkinase_fungal PF17667.1 BAM40392.1 - 1.4e-05 24.1 0.0 2.3e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase FTA2 PF13095.6 BAM40392.1 - 0.0052 16.4 0.5 0.14 11.8 0.1 2.3 2 0 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Kdo PF06293.14 BAM40392.1 - 0.025 13.9 0.1 0.055 12.8 0.1 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Flavoprotein PF02441.19 BAM40393.1 - 3.9e-24 85.2 0.1 3.7e-14 52.8 0.0 2.0 1 1 1 2 2 2 2 Flavoprotein DUF3916 PF13079.6 BAM40393.1 - 0.037 13.9 0.1 0.044 13.7 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3916) Snf7 PF03357.21 BAM40394.1 - 5.1e-17 62.0 21.4 5.1e-17 62.0 21.4 2.0 1 1 1 2 2 2 2 Snf7 Dak2 PF02734.17 BAM40394.1 - 0.014 15.3 1.3 0.08 12.8 0.6 2.3 1 1 1 2 2 2 0 DAK2 domain Peptidase_C10 PF01640.17 BAM40394.1 - 0.54 10.6 5.8 1 9.6 3.8 2.2 1 1 1 2 2 2 0 Peptidase C10 family Citrate_synt PF00285.21 BAM40395.1 - 1.7e-84 284.0 0.0 2.7e-46 158.3 0.0 2.3 1 1 1 2 2 2 2 Citrate synthase, C-terminal domain GcpE PF04551.14 BAM40396.1 - 6.9e-154 512.1 0.4 5.7e-153 509.1 0.4 2.0 1 1 0 1 1 1 1 GcpE protein DUF4783 PF16022.5 BAM40396.1 - 0.0058 16.8 0.3 0.017 15.3 0.3 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4783) Nsp3_PL2pro PF12124.8 BAM40396.1 - 0.017 14.9 0.1 0.062 13.1 0.0 2.0 2 0 0 2 2 2 0 Coronavirus polyprotein cleavage domain Blo-t-5 PF11642.8 BAM40396.1 - 0.87 9.6 5.7 0.66 10.0 3.1 2.1 2 0 0 2 2 2 0 Mite allergen Blo t 5 Herpes_LMP1 PF05297.11 BAM40397.1 - 0.74 9.0 6.1 1 8.5 6.1 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) ABC_tran PF00005.27 BAM40398.1 - 4.1e-33 114.8 0.0 8.8e-18 65.1 0.0 2.6 2 0 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 BAM40398.1 - 1.4e-08 34.7 11.7 1.4e-08 34.7 11.7 3.4 3 0 0 3 3 3 1 ABC transporter transmembrane region Zeta_toxin PF06414.12 BAM40398.1 - 4.4e-06 26.1 0.3 0.042 13.1 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin MeaB PF03308.16 BAM40398.1 - 5.8e-06 25.5 0.1 0.072 12.1 0.1 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_29 PF13555.6 BAM40398.1 - 1.5e-05 24.6 0.4 0.093 12.5 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 BAM40398.1 - 2.5e-05 24.2 0.3 0.13 12.2 0.1 2.5 2 0 0 2 2 2 2 RsgA GTPase T2SSE PF00437.20 BAM40398.1 - 3e-05 23.2 0.0 0.069 12.2 0.0 2.3 2 0 0 2 2 2 2 Type II/IV secretion system protein AAA_16 PF13191.6 BAM40398.1 - 5.2e-05 23.7 0.5 0.062 13.7 0.0 2.4 2 0 0 2 2 2 2 AAA ATPase domain AAA_30 PF13604.6 BAM40398.1 - 0.0002 21.2 0.1 0.022 14.5 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 BAM40398.1 - 0.00055 20.5 3.9 0.3 11.6 0.3 2.9 3 0 0 3 3 2 2 AAA domain FtsK_SpoIIIE PF01580.18 BAM40398.1 - 0.00076 18.9 0.1 0.11 11.8 0.0 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family ATP_bind_1 PF03029.17 BAM40398.1 - 0.0012 18.7 0.6 0.96 9.2 0.1 2.5 2 0 0 2 2 2 2 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 BAM40398.1 - 0.0019 18.5 0.5 1.4 9.1 0.0 3.0 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.19 BAM40398.1 - 0.0029 17.1 0.7 0.04 13.4 0.1 2.6 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 BAM40398.1 - 0.0032 17.5 1.0 0.54 10.4 0.3 2.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_21 PF13304.6 BAM40398.1 - 0.0035 17.2 2.2 1.3 8.8 0.3 3.0 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_18 PF13238.6 BAM40398.1 - 0.0053 17.3 0.6 4 8.0 0.0 3.0 3 0 0 3 3 2 1 AAA domain DUF87 PF01935.17 BAM40398.1 - 0.0083 16.2 5.0 0.083 13.0 0.4 2.6 2 0 0 2 2 2 1 Helicase HerA, central domain MobB PF03205.14 BAM40398.1 - 0.011 15.7 0.7 1.1 9.2 0.3 2.6 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B TrwB_AAD_bind PF10412.9 BAM40398.1 - 0.013 14.5 1.3 0.9 8.4 0.0 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain NACHT PF05729.12 BAM40398.1 - 0.018 14.9 1.2 12 5.8 0.1 3.5 3 0 0 3 3 3 0 NACHT domain cobW PF02492.19 BAM40398.1 - 0.02 14.5 2.5 0.73 9.4 0.2 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_24 PF13479.6 BAM40398.1 - 0.033 13.9 0.3 5.4 6.7 0.1 2.4 2 0 0 2 2 2 0 AAA domain DnaB_C PF03796.15 BAM40398.1 - 0.04 13.2 0.1 4.8 6.4 0.0 2.3 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain TsaE PF02367.17 BAM40398.1 - 0.047 13.7 0.3 15 5.6 0.0 2.6 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE KAP_NTPase PF07693.14 BAM40398.1 - 0.059 12.6 0.0 3.5 6.8 0.0 2.3 2 0 0 2 2 2 0 KAP family P-loop domain AAA_33 PF13671.6 BAM40398.1 - 0.066 13.4 1.2 4 7.6 0.3 2.7 2 0 0 2 2 2 0 AAA domain AAA_7 PF12775.7 BAM40398.1 - 0.07 12.6 1.2 2.1 7.8 0.2 2.4 2 0 0 2 2 2 0 P-loop containing dynein motor region RNA_helicase PF00910.22 BAM40398.1 - 0.083 13.3 0.3 13 6.2 0.0 3.3 3 0 0 3 3 2 0 RNA helicase DUF815 PF05673.13 BAM40398.1 - 0.089 11.9 0.2 0.58 9.3 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_25 PF13481.6 BAM40398.1 - 0.097 12.2 0.1 7 6.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain Dynamin_N PF00350.23 BAM40398.1 - 0.15 12.1 4.8 0.34 10.9 0.6 3.0 3 0 0 3 3 3 0 Dynamin family NTPase_1 PF03266.15 BAM40398.1 - 0.16 11.9 1.8 14 5.5 0.1 2.6 2 0 0 2 2 2 0 NTPase SRP54 PF00448.22 BAM40398.1 - 0.39 10.3 2.2 0.55 9.8 0.1 2.1 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_19 PF13245.6 BAM40398.1 - 0.47 10.8 2.1 15 5.9 0.2 2.5 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 BAM40398.1 - 4.4 6.4 7.7 0.43 9.7 0.1 2.9 3 0 0 3 3 3 0 NB-ARC domain ABC_tran PF00005.27 BAM40399.1 - 6.5e-34 117.4 0.0 2.7e-18 66.8 0.0 2.9 3 0 0 3 3 3 2 ABC transporter Zeta_toxin PF06414.12 BAM40399.1 - 4.6e-06 26.0 0.1 0.043 13.1 0.0 2.3 2 0 0 2 2 2 2 Zeta toxin MeaB PF03308.16 BAM40399.1 - 8e-06 25.0 0.1 0.11 11.5 0.1 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 BAM40399.1 - 2.1e-05 25.0 0.1 0.031 14.6 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 BAM40399.1 - 3.3e-05 23.6 0.2 0.097 12.4 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain T2SSE PF00437.20 BAM40399.1 - 4.7e-05 22.6 0.1 0.12 11.4 0.0 2.3 2 0 0 2 2 2 2 Type II/IV secretion system protein RsgA_GTPase PF03193.16 BAM40399.1 - 5.1e-05 23.2 0.5 0.25 11.2 0.1 2.4 2 0 0 2 2 2 2 RsgA GTPase AAA_30 PF13604.6 BAM40399.1 - 0.00032 20.5 0.0 0.037 13.8 0.0 2.2 2 0 0 2 2 2 1 AAA domain ATP_bind_1 PF03029.17 BAM40399.1 - 0.00056 19.8 0.8 0.9 9.3 0.1 2.7 2 0 0 2 2 2 2 Conserved hypothetical ATP binding protein FtsK_SpoIIIE PF01580.18 BAM40399.1 - 0.00067 19.1 0.2 0.099 12.0 0.0 2.4 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_23 PF13476.6 BAM40399.1 - 0.0015 19.1 0.9 1.4 9.4 0.0 2.9 3 0 0 3 3 2 1 AAA domain AAA_22 PF13401.6 BAM40399.1 - 0.0021 18.3 0.6 1.5 9.1 0.0 2.9 2 0 0 2 2 2 1 AAA domain AAA_21 PF13304.6 BAM40399.1 - 0.0024 17.7 1.6 2.4 7.9 0.2 3.4 4 0 0 4 4 3 2 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 BAM40399.1 - 0.0038 17.3 1.0 0.88 9.7 0.3 2.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_18 PF13238.6 BAM40399.1 - 0.0052 17.3 0.1 4.5 7.8 0.0 2.7 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.19 BAM40399.1 - 0.0067 15.9 0.5 0.066 12.6 0.1 2.5 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_7 PF12775.7 BAM40399.1 - 0.012 15.2 1.3 2 7.9 0.2 2.4 2 0 0 2 2 2 0 P-loop containing dynein motor region cobW PF02492.19 BAM40399.1 - 0.023 14.3 2.5 0.88 9.1 0.2 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain MobB PF03205.14 BAM40399.1 - 0.025 14.5 0.7 1.9 8.4 0.3 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B TrwB_AAD_bind PF10412.9 BAM40399.1 - 0.03 13.2 0.9 0.84 8.5 0.0 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain Dynamin_N PF00350.23 BAM40399.1 - 0.044 13.8 5.2 0.32 11.0 0.6 3.2 3 0 0 3 3 3 0 Dynamin family TsaE PF02367.17 BAM40399.1 - 0.045 13.8 0.1 14 5.7 0.0 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 BAM40399.1 - 0.05 13.3 0.2 5.1 6.8 0.1 2.3 2 0 0 2 2 2 0 AAA domain VirE PF05272.11 BAM40399.1 - 0.053 13.2 0.1 2.6 7.7 0.1 2.3 2 0 0 2 2 2 0 Virulence-associated protein E AAA_33 PF13671.6 BAM40399.1 - 0.054 13.7 1.3 3.8 7.7 0.3 2.6 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 BAM40399.1 - 0.057 13.5 8.1 0.085 12.9 0.3 2.8 3 0 0 3 3 2 0 Helicase HerA, central domain AAA_25 PF13481.6 BAM40399.1 - 0.086 12.4 0.1 6.6 6.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 BAM40399.1 - 0.093 12.7 1.4 13 5.7 0.1 2.6 2 0 0 2 2 2 0 NACHT domain DUF815 PF05673.13 BAM40399.1 - 0.13 11.4 0.4 0.83 8.8 0.0 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF815) DnaB_C PF03796.15 BAM40399.1 - 0.16 11.3 0.1 4.6 6.5 0.0 2.2 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain NTPase_1 PF03266.15 BAM40399.1 - 0.21 11.5 1.8 14 5.6 0.1 2.6 2 0 0 2 2 2 0 NTPase NB-ARC PF00931.22 BAM40399.1 - 0.22 10.7 2.1 0.5 9.5 0.1 2.2 2 0 0 2 2 2 0 NB-ARC domain AAA_19 PF13245.6 BAM40399.1 - 0.33 11.3 1.1 14 6.0 0.2 2.5 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 BAM40399.1 - 0.5 10.0 2.4 0.58 9.8 0.1 2.0 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain FAINT PF04385.15 BAM40400.1 - 7.9e-07 29.1 16.0 3.8e-05 23.7 0.4 2.3 2 0 0 2 2 2 2 Domain of unknown function, DUF529 FAINT PF04385.15 BAM40401.1 - 1.3e-20 73.2 27.2 2.4e-05 24.3 0.6 6.5 6 0 0 6 6 6 6 Domain of unknown function, DUF529 zf-NOSIP PF15906.5 BAM40401.1 - 0.056 13.6 0.0 0.31 11.2 0.0 2.1 2 0 0 2 2 2 0 Zinc-finger of nitric oxide synthase-interacting protein Pkinase PF00069.25 BAM40402.1 - 1.5e-59 201.6 0.0 7.2e-59 199.3 0.0 1.9 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM40402.1 - 2.4e-30 105.7 0.0 2.4e-29 102.4 0.0 2.2 3 0 0 3 3 3 1 Protein tyrosine kinase Kinase-like PF14531.6 BAM40402.1 - 0.0071 15.7 0.0 0.0097 15.2 0.0 1.2 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 BAM40402.1 - 0.17 11.8 0.0 0.28 11.1 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family FGGY_N PF00370.21 BAM40404.1 - 2.8e-65 220.3 0.1 4.7e-65 219.6 0.1 1.4 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, N-terminal domain FGGY_C PF02782.16 BAM40404.1 - 1.4e-43 148.9 0.1 2.7e-43 148.0 0.1 1.5 1 0 0 1 1 1 1 FGGY family of carbohydrate kinases, C-terminal domain IMCp PF12314.8 BAM40405.1 - 7.6e-21 74.2 100.4 8.5e-21 74.1 40.2 4.5 2 2 2 4 4 4 3 Inner membrane complex protein Glyco_transf_56 PF07429.11 BAM40406.1 - 0.1 11.7 0.0 0.14 11.3 0.0 1.1 1 0 0 1 1 1 0 4-alpha-L-fucosyltransferase glycosyl transferase group 56 Baculo_LEF5 PF04838.12 BAM40407.1 - 8.5e-05 22.6 0.1 0.0001 22.4 0.1 1.1 1 0 0 1 1 1 1 Baculoviridae late expression factor 5 Ribosomal_L22 PF00237.19 BAM40409.1 - 4.4e-34 116.8 0.0 5.9e-34 116.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L22p/L17e STIMATE PF12400.8 BAM40410.1 - 4.7e-19 69.2 13.3 4.8e-15 56.2 4.5 2.8 3 0 0 3 3 3 2 STIMATE family EF-hand_1 PF00036.32 BAM40412.1 - 7.5e-40 131.5 10.1 1.5e-09 36.7 0.6 4.2 4 0 0 4 4 4 4 EF hand EF-hand_7 PF13499.6 BAM40412.1 - 4.3e-34 116.8 3.6 5.2e-17 62.1 1.4 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 BAM40412.1 - 4.1e-30 103.4 10.9 2.2e-15 56.2 1.0 4.0 2 2 2 4 4 4 4 EF-hand domain pair EF-hand_6 PF13405.6 BAM40412.1 - 1.9e-29 99.0 6.7 2.3e-09 36.4 0.2 4.4 4 0 0 4 4 4 4 EF-hand domain EF-hand_5 PF13202.6 BAM40412.1 - 1.2e-27 94.1 9.5 7.5e-07 28.4 0.0 4.2 4 0 0 4 4 4 4 EF hand EF-hand_9 PF14658.6 BAM40412.1 - 2.2e-13 50.3 0.1 1.3e-07 31.8 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain EF-hand_4 PF12763.7 BAM40412.1 - 3.5e-09 36.5 0.8 7.3e-05 22.7 0.1 2.3 1 1 1 2 2 2 2 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 BAM40412.1 - 5.6e-08 33.1 0.5 0.0034 17.7 0.1 2.1 2 0 0 2 2 2 2 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_11 PF08976.11 BAM40412.1 - 5e-07 30.6 0.0 0.00032 21.5 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain UPF0154 PF03672.13 BAM40412.1 - 3.3e-05 23.8 0.0 0.022 14.7 0.0 2.7 3 0 0 3 3 2 1 Uncharacterised protein family (UPF0154) Dockerin_1 PF00404.18 BAM40412.1 - 6.2e-05 23.1 2.2 0.029 14.6 0.6 2.8 2 2 1 3 3 3 2 Dockerin type I domain RNA_pol_Rpb4 PF03874.16 BAM40412.1 - 0.00029 21.2 0.3 0.54 10.6 0.1 2.4 2 0 0 2 2 2 2 RNA polymerase Rpb4 Caleosin PF05042.13 BAM40412.1 - 0.002 18.1 0.2 0.96 9.4 0.0 2.9 1 1 3 4 4 4 1 Caleosin related protein EFhand_Ca_insen PF08726.10 BAM40412.1 - 0.0022 18.0 0.6 0.0082 16.2 0.0 2.1 2 1 0 2 2 2 1 Ca2+ insensitive EF hand DUF3349 PF11829.8 BAM40412.1 - 0.0032 18.2 0.3 1.6 9.6 0.0 2.6 1 1 2 3 3 3 1 Protein of unknown function (DUF3349) TerB PF05099.13 BAM40412.1 - 0.0058 16.6 0.1 1.3 9.0 0.0 2.4 1 1 1 2 2 2 1 Tellurite resistance protein TerB DUF5580 PF17743.1 BAM40412.1 - 0.02 13.4 0.0 0.022 13.3 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5580) Fe_hyd_lg_C PF02906.14 BAM40412.1 - 0.022 14.4 0.3 0.05 13.3 0.3 1.6 1 1 0 1 1 1 0 Iron only hydrogenase large subunit, C-terminal domain DUF853 PF05872.12 BAM40412.1 - 0.022 13.4 0.1 1.1 7.8 0.0 2.0 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF853) EF-hand_14 PF17959.1 BAM40412.1 - 0.051 13.9 0.3 12 6.3 0.0 2.3 1 1 1 2 2 2 0 EF-hand domain SurA_N_2 PF13623.6 BAM40412.1 - 0.094 12.6 0.2 3.6 7.4 0.1 2.3 2 0 0 2 2 2 0 SurA N-terminal domain IP_trans PF02121.18 BAM40413.1 - 9.4e-39 133.5 0.7 4.5e-24 85.4 0.2 2.3 1 1 1 2 2 2 2 Phosphatidylinositol transfer protein PH PF00169.29 BAM40413.1 - 2.5e-12 47.2 0.8 2.5e-12 47.2 0.8 1.9 2 0 0 2 2 2 1 PH domain PH_9 PF15410.6 BAM40413.1 - 0.0056 17.0 0.0 0.017 15.4 0.0 1.9 1 0 0 1 1 1 1 Pleckstrin homology domain DUF866 PF05907.13 BAM40414.1 - 6.5e-29 100.8 0.0 7.3e-29 100.7 0.0 1.0 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF866) CRAL_TRIO_2 PF13716.6 BAM40415.1 - 3.8e-07 30.3 0.3 1.2e-06 28.7 0.3 1.9 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain CRAL_TRIO PF00650.20 BAM40415.1 - 2e-05 24.4 0.2 4e-05 23.4 0.2 1.5 1 0 0 1 1 1 1 CRAL/TRIO domain Macro PF01661.21 BAM40415.1 - 0.0024 17.9 0.0 0.0058 16.7 0.0 1.7 1 0 0 1 1 1 1 Macro domain Head_binding PF09008.10 BAM40415.1 - 0.091 13.0 0.0 0.17 12.2 0.0 1.4 1 0 0 1 1 1 0 Head binding RRF PF01765.19 BAM40417.1 - 1.2e-24 87.2 0.7 1.8e-24 86.6 0.7 1.3 1 0 0 1 1 1 1 Ribosome recycling factor SHS2_Rpb7-N PF03876.17 BAM40418.1 - 5.3e-05 23.5 0.0 0.0001 22.6 0.0 1.5 1 0 0 1 1 1 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 Caskin-tail PF16632.5 BAM40418.1 - 0.16 12.4 0.2 0.35 11.3 0.2 1.5 1 0 0 1 1 1 0 C-terminal region of Caskin NGP1NT PF08153.12 BAM40419.1 - 2.4e-34 118.3 1.5 4.7e-34 117.3 1.5 1.4 1 0 0 1 1 1 1 NGP1NT (NUC091) domain MMR_HSR1 PF01926.23 BAM40419.1 - 3.3e-16 59.4 0.1 9.2e-14 51.5 0.0 2.7 2 1 0 2 2 2 2 50S ribosome-binding GTPase FeoB_N PF02421.18 BAM40419.1 - 1.3e-06 28.0 0.0 0.00018 21.0 0.0 2.5 3 0 0 3 3 3 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 BAM40419.1 - 4e-05 23.6 0.0 9.6e-05 22.3 0.0 1.6 1 0 0 1 1 1 1 RsgA GTPase Arf PF00025.21 BAM40419.1 - 0.00054 19.5 0.1 0.83 9.1 0.0 2.4 2 0 0 2 2 2 2 ADP-ribosylation factor family GTP_EFTU PF00009.27 BAM40419.1 - 0.017 14.7 0.7 0.54 9.8 0.1 2.9 1 1 0 3 3 3 0 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 BAM40419.1 - 0.39 10.8 8.4 1.4 9.0 0.1 3.8 3 1 1 4 4 4 0 Dynamin family PP-binding PF00550.25 BAM40420.1 - 4.2e-10 39.8 0.1 5.7e-10 39.4 0.1 1.2 1 0 0 1 1 1 1 Phosphopantetheine attachment site PP-binding_2 PF14573.6 BAM40420.1 - 0.0037 17.4 0.3 0.0076 16.5 0.3 1.6 1 1 0 1 1 1 1 Acyl-carrier Actin PF00022.19 BAM40421.1 - 1.6e-73 247.7 0.0 2.3e-72 243.8 0.0 2.5 1 1 0 1 1 1 1 Actin FAINT PF04385.15 BAM40423.1 - 1.3e-19 70.0 25.3 8.8e-12 44.9 1.3 4.3 4 1 0 4 4 4 3 Domain of unknown function, DUF529 W_rich_C PF07483.11 BAM40423.1 - 0.016 15.3 0.9 8.5 6.6 0.0 2.6 2 0 0 2 2 2 0 Tryptophan-rich Synechocystis species C-terminal domain DUF4912 PF16258.5 BAM40423.1 - 0.074 13.3 0.4 0.25 11.6 0.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4912) Neur_chan_memb PF02932.16 BAM40424.1 - 0.23 11.5 0.0 0.23 11.5 0.0 3.3 3 0 0 3 3 3 0 Neurotransmitter-gated ion-channel transmembrane region MEDS PF14417.6 BAM40424.1 - 0.42 10.4 1.7 2.6 7.8 1.7 2.4 1 0 0 1 1 1 0 MEDS: MEthanogen/methylotroph, DcmR Sensory domain Focal_AT PF03623.13 BAM40424.1 - 1.7 8.6 9.7 5.3 7.0 0.1 3.8 3 0 0 3 3 3 0 Focal adhesion targeting region Sec23_trunk PF04811.15 BAM40428.1 - 6.4e-60 202.7 0.0 1.1e-59 202.0 0.0 1.2 1 0 0 1 1 1 1 Sec23/Sec24 trunk domain Sec23_BS PF08033.12 BAM40428.1 - 1.6e-33 115.3 0.1 3.6e-33 114.2 0.1 1.6 1 0 0 1 1 1 1 Sec23/Sec24 beta-sandwich domain Sec23_helical PF04815.15 BAM40428.1 - 4.8e-23 80.9 0.5 9.9e-23 79.9 0.5 1.6 1 0 0 1 1 1 1 Sec23/Sec24 helical domain Gelsolin PF00626.22 BAM40428.1 - 1.7e-13 50.3 0.0 3.8e-13 49.2 0.0 1.6 1 0 0 1 1 1 1 Gelsolin repeat zf-Sec23_Sec24 PF04810.15 BAM40428.1 - 2.1e-10 40.5 1.0 4.2e-10 39.5 0.2 2.0 2 0 0 2 2 2 1 Sec23/Sec24 zinc finger LSM PF01423.22 BAM40429.1 - 5.1e-16 58.1 0.5 6.2e-16 57.8 0.5 1.1 1 0 0 1 1 1 1 LSM domain UPF0121 PF03661.13 BAM40430.1 - 9.3e-18 64.5 8.1 1.4e-17 63.9 8.1 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0121) TrpP PF17099.5 BAM40430.1 - 0.033 14.0 0.2 0.062 13.1 0.2 1.4 1 0 0 1 1 1 0 Tryptophan transporter TrpP Viral_Beta_CD PF04530.12 BAM40430.1 - 0.068 13.5 0.4 0.33 11.2 0.0 2.2 2 1 1 3 3 3 0 Viral Beta C/D like family BCAS2 PF05700.11 BAM40431.1 - 6.5e-22 78.2 0.5 8.5e-22 77.9 0.5 1.1 1 0 0 1 1 1 1 Breast carcinoma amplified sequence 2 (BCAS2) DUF1874 PF08960.10 BAM40431.1 - 0.0064 16.6 0.0 0.014 15.5 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1874) KIX_2 PF16987.5 BAM40431.1 - 0.16 12.0 0.0 0.16 12.0 0.0 1.7 2 0 0 2 2 2 0 KIX domain Pkinase PF00069.25 BAM40432.1 - 7.4e-62 209.1 0.0 1.2e-61 208.4 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM40432.1 - 2.3e-27 95.9 0.0 4.6e-27 94.9 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase EF-hand_7 PF13499.6 BAM40432.1 - 2.7e-09 37.3 1.1 0.0044 17.4 0.2 4.2 3 1 1 4 4 4 2 EF-hand domain pair EF-hand_8 PF13833.6 BAM40432.1 - 3.4e-07 30.0 3.4 0.018 14.9 0.0 3.7 3 1 0 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 BAM40432.1 - 1.3e-06 27.5 4.6 0.024 14.1 0.5 4.0 4 0 0 4 4 4 2 EF hand EF-hand_6 PF13405.6 BAM40432.1 - 1.6e-05 24.5 2.9 1.4 9.1 0.0 4.1 3 0 0 3 3 3 3 EF-hand domain EF-hand_5 PF13202.6 BAM40432.1 - 0.0037 16.7 0.3 0.82 9.3 0.5 2.7 2 0 0 2 2 2 1 EF hand APH PF01636.23 BAM40432.1 - 0.038 13.9 0.0 0.061 13.2 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Kdo PF06293.14 BAM40432.1 - 0.082 12.2 0.1 0.14 11.5 0.1 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family DUF769 PF05590.11 BAM40432.1 - 0.085 12.3 0.0 0.15 11.5 0.0 1.4 1 0 0 1 1 1 0 Xylella fastidiosa protein of unknown function (DUF769) FTA2 PF13095.6 BAM40432.1 - 0.11 12.2 0.0 0.21 11.2 0.0 1.5 1 0 0 1 1 1 0 Kinetochore Sim4 complex subunit FTA2 Pox_A_type_inc PF04508.12 BAM40433.1 - 0.24 11.3 0.0 0.24 11.3 0.0 5.0 5 0 0 5 5 5 0 Viral A-type inclusion protein repeat RGS PF00615.19 BAM40433.1 - 8.2 6.7 17.5 3.9 7.8 2.7 3.3 2 1 1 3 3 3 0 Regulator of G protein signaling domain NPV_P10 PF05531.12 BAM40434.1 - 0.028 14.9 1.8 0.7 10.4 0.1 3.1 2 1 1 3 3 3 0 Nucleopolyhedrovirus P10 protein Csm1_N PF18504.1 BAM40434.1 - 0.049 14.0 2.9 7.6 7.0 0.2 2.7 2 0 0 2 2 2 0 Csm1 N-terminal domain TolA_bind_tri PF16331.5 BAM40434.1 - 0.1 12.7 2.6 1.9 8.6 0.3 2.6 3 0 0 3 3 3 0 TolA binding protein trimerisation FlaF PF07309.11 BAM40434.1 - 0.16 12.0 1.6 2.7 8.0 0.1 2.6 2 1 0 2 2 2 0 Flagellar protein FlaF Exonuc_VII_L PF02601.15 BAM40434.1 - 0.28 10.7 2.6 0.35 10.4 2.6 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit CENP-H PF05837.12 BAM40434.1 - 0.45 10.9 4.5 1.2 9.6 0.5 2.3 2 0 0 2 2 2 0 Centromere protein H (CENP-H) RabGAP-TBC PF00566.18 BAM40435.1 - 7.8e-46 156.4 0.6 1.5e-45 155.5 0.6 1.4 1 0 0 1 1 1 1 Rab-GTPase-TBC domain SprA-related PF12118.8 BAM40435.1 - 0.52 9.4 12.8 0.74 8.9 12.8 1.1 1 0 0 1 1 1 0 SprA-related family ADK PF00406.22 BAM40436.1 - 5.6e-28 97.9 0.0 7e-28 97.6 0.0 1.1 1 0 0 1 1 1 1 Adenylate kinase AAA_17 PF13207.6 BAM40436.1 - 5.9e-19 68.9 0.0 7.7e-19 68.5 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 BAM40436.1 - 3.8e-08 33.9 0.0 5.8e-08 33.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 BAM40436.1 - 1.2e-05 25.6 0.0 3.1e-05 24.1 0.0 1.6 1 1 0 1 1 1 1 AAA domain Zeta_toxin PF06414.12 BAM40436.1 - 0.0032 16.8 0.1 0.015 14.6 0.0 2.0 2 1 0 2 2 2 1 Zeta toxin DnaB_C PF03796.15 BAM40436.1 - 0.018 14.4 0.0 0.85 8.9 0.0 2.1 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain dNK PF01712.19 BAM40436.1 - 0.037 13.9 0.2 1 9.2 0.1 2.1 2 0 0 2 2 2 0 Deoxynucleoside kinase Lipoprotein_18 PF06804.11 BAM40436.1 - 0.056 12.5 0.0 0.068 12.2 0.0 1.2 1 0 0 1 1 1 0 NlpB/DapX lipoprotein TIP49 PF06068.13 BAM40436.1 - 0.074 12.2 0.0 0.1 11.8 0.0 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain 6PF2K PF01591.18 BAM40436.1 - 0.089 12.1 0.0 0.17 11.2 0.0 1.4 1 0 0 1 1 1 0 6-phosphofructo-2-kinase UPF0203 PF05254.12 BAM40437.1 - 1.1e-14 54.4 6.8 1.3e-14 54.1 6.8 1.1 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0203) COX17 PF05051.13 BAM40437.1 - 0.013 15.8 2.3 0.04 14.3 2.2 1.9 1 1 0 1 1 1 0 Cytochrome C oxidase copper chaperone (COX17) FANCL_C PF11793.8 BAM40437.1 - 0.041 14.1 3.3 1 9.6 0.5 2.1 1 1 1 2 2 2 0 FANCL C-terminal domain Seryl_tRNA_N PF02403.22 BAM40438.1 - 0.51 10.6 5.5 0.22 11.8 1.5 2.4 2 1 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain ThiF PF00899.21 BAM40439.1 - 4.2e-87 291.5 0.1 1.3e-62 211.3 0.0 2.2 2 0 0 2 2 2 2 ThiF family UBA_e1_thiolCys PF10585.9 BAM40439.1 - 4.4e-34 118.5 0.1 7.8e-16 58.7 0.0 2.3 1 1 1 2 2 2 2 Ubiquitin-activating enzyme active site E1_FCCH PF16190.5 BAM40439.1 - 6.6e-27 93.5 1.4 1.5e-26 92.4 1.4 1.7 1 0 0 1 1 1 1 Ubiquitin-activating enzyme E1 FCCH domain E1_UFD PF09358.10 BAM40439.1 - 2.6e-20 72.9 0.0 1.2e-19 70.8 0.0 2.2 1 0 0 1 1 1 1 Ubiquitin fold domain E1_4HB PF16191.5 BAM40439.1 - 0.00036 20.7 0.0 0.0012 19.0 0.0 1.9 1 0 0 1 1 1 1 Ubiquitin-activating enzyme E1 four-helix bundle Pyr_redox PF00070.27 BAM40439.1 - 0.0029 18.1 3.5 0.62 10.7 0.1 3.6 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 BAM40439.1 - 0.036 13.3 0.1 0.78 8.9 0.0 2.4 3 0 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 BAM40439.1 - 0.12 11.6 0.1 0.24 10.6 0.1 1.4 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase 2-Hacid_dh_C PF02826.19 BAM40439.1 - 0.13 11.6 0.2 4.7 6.5 0.1 2.4 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DUF5488 PF17590.2 BAM40439.1 - 0.16 11.7 0.1 0.48 10.2 0.1 1.8 1 0 0 1 1 1 0 Family of unknown function (DUF5488) Shikimate_DH PF01488.20 BAM40439.1 - 0.28 11.2 1.5 17 5.5 0.2 2.8 3 0 0 3 3 3 0 Shikimate / quinate 5-dehydrogenase Vac14_Fig4_bd PF11916.8 BAM40440.1 - 1.8e-38 132.0 10.8 9.7e-37 126.4 9.5 2.9 2 1 0 2 2 2 1 Vacuolar protein 14 C-terminal Fig4p binding Vac14_Fab1_bd PF12755.7 BAM40440.1 - 5.6e-32 110.2 5.3 9.5e-28 96.7 0.9 4.0 3 0 0 3 3 3 2 Vacuolar 14 Fab1-binding region HEAT PF02985.22 BAM40440.1 - 3.7e-05 23.6 0.2 0.2 12.0 0.0 3.7 4 0 0 4 4 4 2 HEAT repeat HEAT_EZ PF13513.6 BAM40440.1 - 0.00028 21.3 0.0 0.45 11.1 0.0 3.0 3 0 0 3 3 3 2 HEAT-like repeat Cnd1 PF12717.7 BAM40440.1 - 0.065 13.3 10.3 0.69 9.9 3.5 3.8 3 1 0 3 3 3 0 non-SMC mitotic condensation complex subunit 1 BAP PF06639.11 BAM40441.1 - 0.11 12.8 0.2 6.7 7.1 0.0 2.7 2 0 0 2 2 2 0 Basal layer antifungal peptide (BAP) TatD_DNase PF01026.21 BAM40442.1 - 4.1e-45 154.1 0.0 5.1e-45 153.8 0.0 1.1 1 0 0 1 1 1 1 TatD related DNase Hydrolase PF00702.26 BAM40442.1 - 0.07 13.4 0.0 0.12 12.7 0.0 1.4 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase ATP-synt_D PF01813.17 BAM40442.1 - 0.1 12.4 0.1 0.42 10.4 0.0 1.9 2 0 0 2 2 2 0 ATP synthase subunit D Kinesin PF00225.23 BAM40443.1 - 3.6e-75 252.9 4.3 6.9e-49 166.6 0.8 2.8 1 1 1 2 2 2 2 Kinesin motor domain Microtub_bd PF16796.5 BAM40443.1 - 4e-15 56.0 0.2 1e-14 54.7 0.2 1.7 1 0 0 1 1 1 1 Microtubule binding DUF5642 PF18702.1 BAM40443.1 - 0.0082 15.9 2.3 0.014 15.1 2.3 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF5642) Zot PF05707.12 BAM40443.1 - 0.13 11.9 0.1 1.5 8.4 0.0 2.2 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) AAA_16 PF13191.6 BAM40445.1 - 5.9e-08 33.3 0.0 3.4e-07 30.8 0.0 2.2 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 BAM40445.1 - 1.6e-06 28.6 0.0 4.7e-06 27.0 0.0 1.9 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 BAM40445.1 - 2.3e-05 24.7 0.0 5.8e-05 23.4 0.0 1.7 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 BAM40445.1 - 2.8e-05 24.1 0.9 3.8e-05 23.7 0.2 1.6 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea PIF1 PF05970.14 BAM40445.1 - 0.0015 17.7 0.2 0.0034 16.6 0.2 1.5 1 0 0 1 1 1 1 PIF1-like helicase AAA_7 PF12775.7 BAM40445.1 - 0.012 15.1 0.4 0.03 13.8 0.4 1.7 1 0 0 1 1 1 0 P-loop containing dynein motor region NACHT PF05729.12 BAM40445.1 - 0.013 15.4 0.0 0.028 14.3 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_14 PF13173.6 BAM40445.1 - 0.015 15.4 1.7 0.27 11.3 0.4 3.0 2 1 0 2 2 2 0 AAA domain MobB PF03205.14 BAM40445.1 - 0.018 15.0 0.4 0.14 12.1 0.2 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_19 PF13245.6 BAM40445.1 - 0.02 15.2 0.0 0.046 14.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 BAM40445.1 - 0.039 13.9 0.3 0.12 12.3 0.3 1.9 1 1 0 1 1 1 0 NTPase AAA_24 PF13479.6 BAM40445.1 - 0.039 13.7 0.1 0.099 12.4 0.1 1.6 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 BAM40445.1 - 0.09 11.9 0.3 0.16 11.1 0.3 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_30 PF13604.6 BAM40445.1 - 0.11 12.2 0.0 0.47 10.1 0.1 1.9 1 1 1 2 2 2 0 AAA domain T2SSE PF00437.20 BAM40445.1 - 0.18 10.8 0.1 0.3 10.1 0.1 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein PPR_2 PF13041.6 BAM40446.1 - 0.0027 17.8 0.0 0.81 9.9 0.0 2.5 2 0 0 2 2 2 2 PPR repeat family PPR_3 PF13812.6 BAM40446.1 - 0.033 14.2 0.1 0.38 10.9 0.1 2.3 1 1 1 2 2 2 0 Pentatricopeptide repeat domain GHMP_kinases_C PF08544.13 BAM40447.1 - 0.0009 19.6 0.0 0.16 12.4 0.0 2.5 2 0 0 2 2 2 2 GHMP kinases C terminal GHMP_kinases_N PF00288.26 BAM40447.1 - 0.00095 19.4 0.3 0.0021 18.2 0.3 1.6 1 0 0 1 1 1 1 GHMP kinases N terminal domain DUF956 PF06115.11 BAM40447.1 - 0.019 14.7 0.6 1.6 8.5 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF956) Ribosomal_L28 PF00830.19 BAM40448.1 - 8.4e-14 51.5 4.2 8.4e-14 51.5 4.2 2.1 3 1 0 3 3 3 1 Ribosomal L28 family TP2 PF01254.18 BAM40448.1 - 0.16 12.6 2.0 14 6.2 0.4 2.1 2 0 0 2 2 2 0 Nuclear transition protein 2 eIF-5_eIF-2B PF01873.17 BAM40450.1 - 9.4e-36 122.2 0.0 1.5e-35 121.6 0.0 1.3 1 0 0 1 1 1 1 Domain found in IF2B/IF5 zf-RanBP PF00641.18 BAM40450.1 - 0.058 12.7 1.8 4.4 6.7 0.1 2.4 2 0 0 2 2 2 0 Zn-finger in Ran binding protein and others DFRP_C PF16543.5 BAM40451.1 - 1.2e-14 54.5 4.5 1.2e-14 54.5 4.5 3.7 2 1 0 2 2 2 1 DRG Family Regulatory Proteins, Tma46 CAF1 PF04857.20 BAM40452.1 - 1.7e-76 257.5 0.1 2.6e-76 256.8 0.1 1.2 1 0 0 1 1 1 1 CAF1 family ribonuclease RNA_bind PF08675.11 BAM40452.1 - 8.5e-08 32.1 1.5 2.6e-07 30.6 1.5 1.9 1 0 0 1 1 1 1 RNA binding domain R3H PF01424.22 BAM40452.1 - 0.00042 20.2 0.0 0.00093 19.1 0.0 1.6 1 0 0 1 1 1 1 R3H domain GCP_N_terminal PF17681.1 BAM40453.1 - 4.1e-30 105.4 2.5 1.4e-29 103.8 0.4 2.5 2 0 0 2 2 2 1 Gamma tubulin complex component N-terminal MFS_1 PF07690.16 BAM40454.1 - 2e-09 36.9 22.0 2.6e-05 23.3 6.8 3.0 2 1 1 3 3 3 3 Major Facilitator Superfamily MFS_1 PF07690.16 BAM40455.1 - 3.3e-05 23.0 2.0 3.3e-05 23.0 2.0 2.8 2 1 1 3 3 3 1 Major Facilitator Superfamily MFS_1 PF07690.16 BAM40456.1 - 1.6e-09 37.1 22.1 2.5e-08 33.2 22.1 2.2 1 1 0 1 1 1 1 Major Facilitator Superfamily PX PF00787.24 BAM40457.1 - 4e-09 36.4 0.1 8.4e-09 35.4 0.1 1.5 1 0 0 1 1 1 1 PX domain WD40 PF00400.32 BAM40457.1 - 1.3e-05 25.8 2.2 0.065 14.1 0.0 5.1 5 0 0 5 5 5 1 WD domain, G-beta repeat PQQ_3 PF13570.6 BAM40457.1 - 0.059 13.9 0.0 0.55 10.8 0.0 2.7 3 0 0 3 3 3 0 PQQ-like domain CAF1C_H4-bd PF12265.8 BAM40458.1 - 1.2e-13 51.1 0.1 1.2e-12 47.9 0.0 2.4 2 0 0 2 2 2 1 Histone-binding protein RBBP4 or subunit C of CAF1 complex WD40 PF00400.32 BAM40458.1 - 4.2e-12 46.4 15.9 0.015 16.2 2.7 5.6 5 0 0 5 5 5 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM40458.1 - 8.2e-07 29.2 3.0 0.0009 19.5 0.1 3.9 2 2 2 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain eIF2A PF08662.11 BAM40458.1 - 2.6e-05 24.2 1.0 0.0012 18.8 0.1 2.4 2 1 0 2 2 2 1 Eukaryotic translation initiation factor eIF2A PQQ_2 PF13360.6 BAM40458.1 - 0.0041 16.7 1.4 0.042 13.4 0.2 2.5 1 1 1 2 2 2 1 PQQ-like domain Hira PF07569.11 BAM40458.1 - 0.024 14.4 0.2 0.063 13.0 0.1 1.7 2 0 0 2 2 2 0 TUP1-like enhancer of split Nup160 PF11715.8 BAM40458.1 - 0.057 12.1 3.0 1.3 7.5 0.4 2.6 2 1 0 2 2 2 0 Nucleoporin Nup120/160 PQQ_3 PF13570.6 BAM40458.1 - 0.27 11.8 2.2 32 5.2 0.1 3.5 4 0 0 4 4 4 0 PQQ-like domain VPS9 PF02204.18 BAM40459.1 - 2e-24 85.8 0.8 6.9e-24 84.1 0.6 2.1 2 0 0 2 2 2 1 Vacuolar sorting protein 9 (VPS9) domain RdRP_2 PF00978.21 BAM40459.1 - 0.0083 15.1 0.1 0.014 14.3 0.1 1.3 1 0 0 1 1 1 1 RNA dependent RNA polymerase T6SS_VipA PF05591.12 BAM40459.1 - 0.21 11.4 1.2 3 7.6 0.5 2.6 2 1 0 2 2 2 0 Type VI secretion system, VipA, VC_A0107 or Hcp2 Acyltransferase PF01553.21 BAM40460.1 - 8e-11 41.7 0.0 1.7e-10 40.6 0.0 1.5 1 1 0 1 1 1 1 Acyltransferase zf-CDGSH PF09360.10 BAM40462.1 - 1.3e-06 28.5 0.9 3.1e-06 27.3 0.1 1.9 2 0 0 2 2 2 1 Iron-binding zinc finger CDGSH type ABC_tran PF00005.27 BAM40464.1 - 1.4e-22 80.7 0.0 1.6e-18 67.5 0.0 2.6 2 0 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 BAM40464.1 - 5.3e-07 29.6 27.9 5.3e-07 29.6 27.9 2.0 2 1 1 3 3 3 1 ABC transporter transmembrane region RsgA_GTPase PF03193.16 BAM40464.1 - 6.4e-05 22.9 0.2 0.00012 22.0 0.2 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_30 PF13604.6 BAM40464.1 - 0.0025 17.6 0.0 0.0056 16.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAM40464.1 - 0.0041 17.5 0.0 0.0085 16.5 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain MeaB PF03308.16 BAM40464.1 - 0.0099 14.9 0.1 0.017 14.1 0.1 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB PRK PF00485.18 BAM40464.1 - 0.022 14.5 0.1 0.053 13.3 0.1 1.6 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family Zeta_toxin PF06414.12 BAM40464.1 - 0.027 13.8 0.2 0.12 11.7 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin MobB PF03205.14 BAM40464.1 - 0.035 14.0 0.2 0.07 13.0 0.2 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B NB-ARC PF00931.22 BAM40464.1 - 0.062 12.5 0.1 0.11 11.6 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.6 BAM40464.1 - 0.08 12.7 0.1 0.2 11.4 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_22 PF13401.6 BAM40464.1 - 0.14 12.5 0.0 0.53 10.6 0.0 2.0 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 BAM40464.1 - 0.14 12.2 0.1 0.33 11.0 0.1 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_23 PF13476.6 BAM40464.1 - 0.46 10.9 1.5 0.84 10.1 0.2 2.0 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 BAM40465.1 - 1.6e-32 112.9 0.0 1.5e-16 61.1 0.0 2.9 2 1 1 3 3 3 2 ABC transporter ABC_membrane PF00664.23 BAM40465.1 - 1.4e-06 28.2 25.0 1.4e-06 28.2 25.0 3.2 3 0 0 3 3 3 1 ABC transporter transmembrane region AAA_29 PF13555.6 BAM40465.1 - 5.9e-06 25.9 0.9 0.11 12.3 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 BAM40465.1 - 1.4e-05 25.1 1.3 0.017 15.0 0.2 2.4 2 0 0 2 2 2 2 RsgA GTPase Zeta_toxin PF06414.12 BAM40465.1 - 0.00011 21.5 1.7 0.19 11.0 0.0 2.9 3 0 0 3 3 3 2 Zeta toxin MeaB PF03308.16 BAM40465.1 - 0.00014 21.0 0.2 0.023 13.7 0.0 2.2 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 BAM40465.1 - 0.00014 22.3 0.0 0.01 16.2 0.0 2.3 2 0 0 2 2 2 1 AAA ATPase domain T2SSE PF00437.20 BAM40465.1 - 0.0002 20.5 0.0 0.033 13.3 0.0 2.2 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_21 PF13304.6 BAM40465.1 - 0.00027 20.9 3.9 0.15 11.8 0.2 3.0 3 0 0 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system ATP_bind_1 PF03029.17 BAM40465.1 - 0.00044 20.1 0.9 0.34 10.6 0.1 2.7 2 0 0 2 2 2 2 Conserved hypothetical ATP binding protein AAA_30 PF13604.6 BAM40465.1 - 0.00081 19.2 0.3 0.078 12.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 BAM40465.1 - 0.00088 19.8 2.4 0.22 12.0 0.1 2.7 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 BAM40465.1 - 0.0009 19.5 0.4 0.26 11.6 0.0 2.7 2 0 0 2 2 2 1 AAA domain TrwB_AAD_bind PF10412.9 BAM40465.1 - 0.002 17.1 1.8 0.81 8.5 0.1 2.2 2 0 0 2 2 2 2 Type IV secretion-system coupling protein DNA-binding domain AAA_18 PF13238.6 BAM40465.1 - 0.0024 18.4 0.2 0.2 12.2 0.1 2.8 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 BAM40465.1 - 0.0046 17.0 1.0 0.37 10.9 0.2 2.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase FtsK_SpoIIIE PF01580.18 BAM40465.1 - 0.0071 15.7 0.2 0.51 9.6 0.0 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family cobW PF02492.19 BAM40465.1 - 0.0082 15.7 2.5 0.79 9.3 0.2 2.3 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain DUF815 PF05673.13 BAM40465.1 - 0.017 14.3 0.1 2.6 7.1 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_24 PF13479.6 BAM40465.1 - 0.024 14.4 0.5 5.6 6.6 0.0 2.4 2 0 0 2 2 2 0 AAA domain SMC_N PF02463.19 BAM40465.1 - 0.033 13.6 2.0 0.58 9.6 0.2 2.5 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain ATPase_2 PF01637.18 BAM40465.1 - 0.048 13.6 0.4 7.3 6.4 0.1 2.9 2 1 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_10 PF12846.7 BAM40465.1 - 0.053 12.4 0.3 0.43 9.4 0.2 2.1 2 0 0 2 2 2 0 AAA-like domain Dynamin_N PF00350.23 BAM40465.1 - 0.059 13.4 2.1 3.8 7.5 0.4 2.5 2 0 0 2 2 2 0 Dynamin family TsaE PF02367.17 BAM40465.1 - 0.1 12.6 0.2 11 6.0 0.0 2.6 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 BAM40465.1 - 0.15 12.3 0.4 20 5.3 0.0 2.5 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 BAM40465.1 - 0.15 12.0 2.1 2.4 8.1 0.2 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B NACHT PF05729.12 BAM40465.1 - 0.19 11.6 1.3 5.9 6.8 0.1 2.5 2 0 0 2 2 2 0 NACHT domain PhoH PF02562.16 BAM40465.1 - 0.25 10.8 0.6 1.9 7.9 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein AAA_19 PF13245.6 BAM40465.1 - 0.25 11.7 2.0 14 6.0 0.2 2.4 2 0 0 2 2 2 0 AAA domain NB-ARC PF00931.22 BAM40465.1 - 0.35 10.0 2.9 0.18 11.0 0.1 1.9 2 0 0 2 2 2 0 NB-ARC domain DUF87 PF01935.17 BAM40465.1 - 1.1 9.2 10.1 0.82 9.7 0.5 2.8 3 0 0 3 3 2 0 Helicase HerA, central domain ABC_tran PF00005.27 BAM40466.1 - 8.8e-33 113.7 0.0 1.2e-16 61.4 0.0 2.6 2 0 0 2 2 2 2 ABC transporter RsgA_GTPase PF03193.16 BAM40466.1 - 8.7e-06 25.7 2.1 0.038 13.9 0.3 2.7 2 1 0 2 2 2 2 RsgA GTPase MeaB PF03308.16 BAM40466.1 - 8.8e-05 21.6 0.3 0.04 12.9 0.1 2.3 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_29 PF13555.6 BAM40466.1 - 8.9e-05 22.2 0.6 0.34 10.7 0.1 2.8 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 BAM40466.1 - 0.00012 22.5 0.1 0.016 15.6 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain AAA_30 PF13604.6 BAM40466.1 - 0.00031 20.5 0.8 0.024 14.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain Zeta_toxin PF06414.12 BAM40466.1 - 0.00037 19.8 0.4 0.43 9.8 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin MMR_HSR1 PF01926.23 BAM40466.1 - 0.0025 17.9 0.4 0.58 10.3 0.1 2.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_10 PF12846.7 BAM40466.1 - 0.0036 16.3 0.7 0.4 9.6 0.2 2.3 2 0 0 2 2 2 1 AAA-like domain AAA_22 PF13401.6 BAM40466.1 - 0.0051 17.1 0.4 1.6 9.0 0.0 2.8 2 0 0 2 2 2 1 AAA domain T2SSE PF00437.20 BAM40466.1 - 0.0072 15.4 1.1 0.17 10.9 0.1 2.4 2 1 0 2 2 2 1 Type II/IV secretion system protein FtsK_SpoIIIE PF01580.18 BAM40466.1 - 0.0085 15.5 0.1 0.99 8.7 0.0 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_21 PF13304.6 BAM40466.1 - 0.014 15.2 0.3 0.52 10.1 0.1 2.5 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system cobW PF02492.19 BAM40466.1 - 0.027 14.1 2.0 2.1 7.9 0.1 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain DUF87 PF01935.17 BAM40466.1 - 0.031 14.4 5.1 0.2 11.7 0.3 2.9 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_24 PF13479.6 BAM40466.1 - 0.038 13.7 1.7 8.9 6.0 0.1 3.1 3 0 0 3 3 3 0 AAA domain DUF815 PF05673.13 BAM40466.1 - 0.1 11.7 0.1 1.5 7.9 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF815) TsaE PF02367.17 BAM40466.1 - 0.12 12.3 0.3 20 5.2 0.0 2.8 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ATP_bind_1 PF03029.17 BAM40466.1 - 0.13 12.0 5.9 2.3 7.9 0.0 3.0 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein SMC_N PF02463.19 BAM40466.1 - 0.16 11.4 0.6 3.6 7.0 0.2 2.8 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain TrwB_AAD_bind PF10412.9 BAM40466.1 - 0.17 10.7 2.4 7.3 5.4 0.1 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain MobB PF03205.14 BAM40466.1 - 0.31 10.9 2.8 1.1 9.1 0.3 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_19 PF13245.6 BAM40466.1 - 0.88 9.9 2.9 17 5.7 0.1 2.7 3 0 0 3 3 2 0 AAA domain AAA_23 PF13476.6 BAM40466.1 - 2.1 8.8 9.5 0.36 11.3 0.1 3.2 4 0 0 4 4 2 0 AAA domain FAINT PF04385.15 BAM40467.1 - 0.0029 17.6 17.3 0.019 15.0 1.4 3.4 3 1 0 3 3 3 2 Domain of unknown function, DUF529 DUF3081 PF11280.8 BAM40467.1 - 0.072 12.9 0.0 0.25 11.2 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3081) DEAD PF00270.29 BAM40470.1 - 1.4e-45 155.2 0.3 2.7e-45 154.3 0.3 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM40470.1 - 2.6e-30 105.0 0.2 1.2e-29 102.8 0.0 2.3 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 BAM40470.1 - 6.9e-05 22.2 0.1 0.00011 21.6 0.1 1.4 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase AAA_22 PF13401.6 BAM40470.1 - 0.28 11.5 2.1 1.5 9.1 1.0 2.6 2 1 0 2 2 2 0 AAA domain LSM PF01423.22 BAM40471.1 - 3e-16 58.8 0.8 4e-16 58.5 0.8 1.2 1 0 0 1 1 1 1 LSM domain NDUF_B7 PF05676.13 BAM40471.1 - 0.032 14.0 0.0 0.051 13.3 0.0 1.3 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) YmzC PF14157.6 BAM40472.1 - 0.019 15.0 0.2 0.47 10.6 0.0 2.7 2 0 0 2 2 2 0 YmzC-like protein WD40 PF00400.32 BAM40474.1 - 1e-12 48.3 10.1 0.00063 20.5 0.0 5.6 5 1 1 6 6 6 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM40474.1 - 2.7e-06 27.6 0.7 0.0057 16.9 0.0 3.7 3 1 1 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain IF4E PF01652.18 BAM40475.1 - 5.4e-31 107.5 0.2 7.4e-31 107.1 0.2 1.2 1 0 0 1 1 1 1 Eukaryotic initiation factor 4E Ank_2 PF12796.7 BAM40476.1 - 3.1e-18 66.1 1.9 1.4e-12 48.0 0.1 3.0 2 1 1 3 3 3 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 BAM40476.1 - 4.2e-18 65.5 4.7 4.3e-11 43.1 0.2 3.7 2 1 2 4 4 4 3 Ankyrin repeats (many copies) Ank_5 PF13857.6 BAM40476.1 - 4.7e-17 61.8 1.3 0.00011 22.4 0.0 4.4 2 1 2 4 4 4 3 Ankyrin repeats (many copies) Ank PF00023.30 BAM40476.1 - 1.5e-14 53.7 3.7 2e-06 28.0 0.1 3.9 3 1 0 3 3 3 2 Ankyrin repeat Ank_3 PF13606.6 BAM40476.1 - 2.5e-14 52.0 3.5 0.00016 21.8 0.0 4.5 3 1 1 4 4 4 4 Ankyrin repeat Cation_ATPase_N PF00690.26 BAM40476.1 - 0.058 13.1 0.0 0.72 9.6 0.0 2.5 2 0 0 2 2 2 0 Cation transporter/ATPase, N-terminus ABC_tran PF00005.27 BAM40477.1 - 2e-35 122.3 0.0 3.6e-35 121.5 0.0 1.4 1 0 0 1 1 1 1 ABC transporter ABC_membrane PF00664.23 BAM40477.1 - 2.1e-34 119.5 17.4 2.9e-34 119.0 17.4 1.2 1 0 0 1 1 1 1 ABC transporter transmembrane region SMC_N PF02463.19 BAM40477.1 - 1.4e-06 27.9 2.9 3.7e-05 23.3 0.2 2.7 3 0 0 3 3 3 1 RecF/RecN/SMC N terminal domain DEAD PF00270.29 BAM40477.1 - 9.8e-06 25.4 0.5 3.5e-05 23.6 0.5 2.0 1 1 0 1 1 1 1 DEAD/DEAH box helicase AAA_22 PF13401.6 BAM40477.1 - 0.0002 21.6 0.2 0.0016 18.7 0.2 2.2 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 BAM40477.1 - 0.00029 21.2 0.3 0.011 16.1 0.3 2.3 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 BAM40477.1 - 0.0014 19.2 0.0 0.0034 17.9 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_21 PF13304.6 BAM40477.1 - 0.0039 17.0 0.1 0.0079 16.0 0.1 1.5 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_5 PF07728.14 BAM40477.1 - 0.0046 17.0 0.0 0.1 12.6 0.0 2.4 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_23 PF13476.6 BAM40477.1 - 0.005 17.4 4.5 0.02 15.4 4.5 2.1 1 1 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 BAM40477.1 - 0.0099 16.3 0.1 0.47 10.9 0.0 2.5 2 0 0 2 2 2 1 RNA helicase AAA_7 PF12775.7 BAM40477.1 - 0.016 14.8 0.5 0.036 13.6 0.0 1.8 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_16 PF13191.6 BAM40477.1 - 0.016 15.6 0.0 0.035 14.5 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain Rad17 PF03215.15 BAM40477.1 - 0.017 15.1 0.0 0.04 13.8 0.0 1.6 1 0 0 1 1 1 0 Rad17 P-loop domain AAA_30 PF13604.6 BAM40477.1 - 0.03 14.1 0.0 0.061 13.0 0.0 1.6 1 1 0 1 1 1 0 AAA domain T2SSE PF00437.20 BAM40477.1 - 0.032 13.3 0.0 0.06 12.4 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein DUF4957 PF16318.5 BAM40477.1 - 0.038 13.9 0.2 0.083 12.8 0.2 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4957) DUF87 PF01935.17 BAM40477.1 - 0.039 14.0 0.7 0.13 12.3 0.7 2.0 1 1 0 1 1 1 0 Helicase HerA, central domain AAA_24 PF13479.6 BAM40477.1 - 0.05 13.3 0.3 0.14 11.8 0.3 2.0 1 1 0 1 1 1 0 AAA domain ResIII PF04851.15 BAM40477.1 - 0.054 13.5 0.2 0.12 12.3 0.2 1.7 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit RuvB_N PF05496.12 BAM40477.1 - 0.075 12.8 0.1 0.57 9.9 0.0 2.0 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain MMR_HSR1 PF01926.23 BAM40477.1 - 0.098 12.8 0.1 0.41 10.7 0.0 2.1 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_28 PF13521.6 BAM40477.1 - 0.099 12.9 0.2 0.23 11.7 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 BAM40477.1 - 0.11 12.3 0.0 0.33 10.7 0.0 1.8 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_14 PF13173.6 BAM40477.1 - 0.11 12.6 0.8 0.66 10.0 0.1 2.6 2 1 1 3 3 2 0 AAA domain NTPase_1 PF03266.15 BAM40477.1 - 0.12 12.3 0.5 1.4 8.9 0.1 2.3 1 1 1 2 2 2 0 NTPase AAA_11 PF13086.6 BAM40477.1 - 0.13 12.0 0.0 0.82 9.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain ABC_membrane_3 PF13748.6 BAM40477.1 - 0.2 10.9 8.6 0.03 13.6 1.5 2.4 2 0 0 2 2 2 0 ABC transporter transmembrane region DUF3267 PF11667.8 BAM40477.1 - 0.54 10.6 10.8 0.071 13.4 4.2 2.5 2 0 0 2 2 2 0 Putative zincin peptidase YrhC PF14143.6 BAM40477.1 - 0.73 10.0 3.6 0.51 10.5 0.4 2.4 2 1 0 2 2 2 0 YrhC-like protein WD40 PF00400.32 BAM40480.1 - 1.5e-22 79.4 4.2 2.5e-05 24.9 0.0 6.8 6 0 0 6 6 6 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM40480.1 - 2.1e-08 34.3 5.6 0.13 12.5 0.0 6.5 5 3 3 8 8 8 3 Anaphase-promoting complex subunit 4 WD40 domain UPF0564 PF10595.9 BAM40482.1 - 0.078 12.0 1.0 0.11 11.5 1.0 1.2 1 0 0 1 1 1 0 Uncharacterised protein family UPF0564 FAINT PF04385.15 BAM40484.1 - 3.3e-09 36.7 14.2 1.6e-05 24.9 0.4 3.7 3 1 0 3 3 3 3 Domain of unknown function, DUF529 FAINT PF04385.15 BAM40486.1 - 0.00015 21.8 1.8 0.00031 20.8 1.8 1.6 1 0 0 1 1 1 1 Domain of unknown function, DUF529 SARS_lipid_bind PF09399.10 BAM40486.1 - 0.18 12.0 0.0 0.26 11.5 0.0 1.3 1 0 0 1 1 1 0 SARS lipid binding protein DUF2237 PF09996.9 BAM40487.1 - 0.15 12.1 0.0 0.25 11.4 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2237) PLA2_B PF01735.18 BAM40488.1 - 0.12 10.8 0.2 0.22 9.9 0.2 1.3 1 0 0 1 1 1 0 Lysophospholipase catalytic domain Mt_ATP-synt_D PF05873.12 BAM40488.1 - 0.37 10.6 3.2 5.9 6.7 0.2 2.4 2 1 0 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) PITH PF06201.13 BAM40489.1 - 3.9e-22 79.1 0.0 4.6e-22 78.9 0.0 1.1 1 0 0 1 1 1 1 PITH domain Glyco_transf_36 PF06165.11 BAM40489.1 - 0.097 12.1 0.0 0.13 11.6 0.0 1.3 1 0 0 1 1 1 0 Glycosyltransferase family 36 EF-hand_1 PF00036.32 BAM40490.1 - 0.00017 20.9 5.2 0.0023 17.3 0.6 2.9 2 0 0 2 2 2 2 EF hand EF-hand_5 PF13202.6 BAM40490.1 - 0.0017 17.8 3.2 0.0017 17.8 0.5 2.4 2 0 0 2 2 2 1 EF hand EF-hand_7 PF13499.6 BAM40490.1 - 0.011 16.2 8.3 0.1 13.0 8.1 2.6 2 1 0 2 2 2 0 EF-hand domain pair EF-hand_6 PF13405.6 BAM40490.1 - 0.038 13.9 4.4 0.047 13.6 0.8 2.6 2 0 0 2 2 2 0 EF-hand domain Prenyltrans PF00432.21 BAM40492.1 - 5.3e-28 96.4 17.9 2.5e-08 33.5 0.3 6.2 6 0 0 6 6 6 5 Prenyltransferase and squalene oxidase repeat TTL PF03133.15 BAM40493.1 - 8.1e-51 172.9 0.4 1.7e-50 171.8 0.4 1.5 1 0 0 1 1 1 1 Tubulin-tyrosine ligase family ATPgrasp_YheCD PF14398.6 BAM40493.1 - 6e-10 38.8 0.0 6.6e-06 25.6 0.0 3.1 2 1 1 3 3 3 2 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 BAM40493.1 - 0.00032 20.1 0.0 0.15 11.3 0.0 2.3 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp RimK PF08443.11 BAM40493.1 - 0.0095 15.6 0.0 3.2 7.3 0.0 2.3 2 0 0 2 2 2 2 RimK-like ATP-grasp domain ATP-grasp_3 PF02655.14 BAM40493.1 - 0.015 15.3 0.0 4.2 7.4 0.0 2.8 2 0 0 2 2 2 0 ATP-grasp domain Fcf2 PF08698.11 BAM40495.1 - 1.3e-18 67.2 2.3 3.5e-18 65.8 2.3 1.8 1 0 0 1 1 1 1 Fcf2 pre-rRNA processing DUF2639 PF11121.8 BAM40495.1 - 0.038 14.0 2.5 0.13 12.3 2.5 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF2639) RRM_1 PF00076.22 BAM40496.1 - 2.7e-33 113.6 0.1 1.8e-15 56.5 0.0 3.0 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 BAM40496.1 - 5.3e-05 23.1 0.0 0.01 15.8 0.0 2.5 2 0 0 2 2 2 2 Nup53/35/40-type RNA recognition motif Limkain-b1 PF11608.8 BAM40496.1 - 0.0014 18.7 0.1 0.21 11.7 0.0 3.2 3 0 0 3 3 3 1 Limkain b1 ATP-synt_C PF00137.21 BAM40498.1 - 1.1e-07 32.1 9.1 1.6e-07 31.6 9.1 1.2 1 0 0 1 1 1 1 ATP synthase subunit C Ribosomal_L18A PF01775.17 BAM40499.1 - 6.4e-53 178.0 0.4 8.2e-53 177.6 0.4 1.1 1 0 0 1 1 1 1 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A Ribosomal_L18 PF17135.4 BAM40500.1 - 1.2e-78 262.8 4.2 1.4e-78 262.6 4.2 1.0 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e Ribosomal_L27A PF00828.19 BAM40500.1 - 0.0097 16.6 0.1 0.031 14.9 0.1 2.0 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A TIC20 PF16166.5 BAM40502.1 - 1.3e-11 44.6 7.8 2.1e-11 43.9 7.8 1.3 1 0 0 1 1 1 1 Chloroplast import apparatus Tic20-like Ras PF00071.22 BAM40503.1 - 2e-57 193.3 0.2 2e-57 193.3 0.2 1.4 2 0 0 2 2 2 1 Ras family Roc PF08477.13 BAM40503.1 - 1.4e-35 122.2 0.6 3.3e-35 120.9 0.1 1.8 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 BAM40503.1 - 2e-17 63.2 0.1 2.6e-17 62.8 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 BAM40503.1 - 7.2e-11 41.9 0.1 9.2e-11 41.5 0.1 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region SRPRB PF09439.10 BAM40503.1 - 7.2e-07 28.8 0.0 1.2e-06 28.0 0.0 1.3 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 BAM40503.1 - 7.8e-07 28.8 0.1 1.4e-05 24.8 0.1 2.2 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 BAM40503.1 - 2.3e-05 24.5 0.4 0.00039 20.5 0.0 2.2 2 0 0 2 2 2 1 50S ribosome-binding GTPase FeoB_N PF02421.18 BAM40503.1 - 0.00031 20.3 0.0 0.0016 18.0 0.0 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 BAM40503.1 - 0.0035 17.3 0.1 0.41 10.5 0.0 2.9 3 0 0 3 3 3 1 RsgA GTPase AAA_24 PF13479.6 BAM40503.1 - 0.02 14.6 0.0 0.92 9.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain TniB PF05621.11 BAM40503.1 - 0.033 13.6 0.0 0.073 12.5 0.0 1.6 1 0 0 1 1 1 0 Bacterial TniB protein Dynamin_N PF00350.23 BAM40503.1 - 0.059 13.4 0.1 0.8 9.7 0.0 2.3 1 1 0 2 2 2 0 Dynamin family AAA_16 PF13191.6 BAM40503.1 - 0.079 13.3 0.0 0.2 12.0 0.0 1.8 1 1 0 2 2 2 0 AAA ATPase domain G-alpha PF00503.20 BAM40503.1 - 0.096 11.8 0.7 1.5 7.9 0.1 2.5 1 1 1 2 2 2 0 G-protein alpha subunit TetR_C_16 PF17920.1 BAM40503.1 - 0.12 12.7 0.0 0.52 10.6 0.0 1.9 2 0 0 2 2 2 0 Tetracyclin repressor-like, C-terminal domain ABC_tran PF00005.27 BAM40503.1 - 0.13 12.8 0.7 2.2 8.8 0.1 2.7 1 1 1 2 2 2 0 ABC transporter ATP_bind_3 PF01171.20 BAM40504.1 - 3.9e-17 62.6 0.0 6.8e-17 61.8 0.0 1.4 1 0 0 1 1 1 1 PP-loop family zn-ribbon_14 PF16503.5 BAM40504.1 - 0.0032 16.9 0.9 0.0032 16.9 0.9 3.3 5 0 0 5 5 5 1 Zinc-ribbon CTU2 PF10288.9 BAM40504.1 - 0.056 13.7 1.6 0.35 11.1 0.9 2.5 2 1 0 2 2 2 0 Cytoplasmic tRNA 2-thiolation protein 2 DNA_pol_B_palm PF14792.6 BAM40504.1 - 0.12 12.5 0.0 0.25 11.5 0.0 1.5 1 0 0 1 1 1 0 DNA polymerase beta palm DUF1660 PF07874.11 BAM40504.1 - 7 7.2 6.5 3.9 8.0 2.0 2.9 2 1 0 2 2 2 0 Prophage protein (DUF1660) DUF2202 PF09968.9 BAM40506.1 - 0.017 15.0 0.1 0.033 14.1 0.1 1.5 1 0 0 1 1 1 0 Uncharacterized protein domain (DUF2202) Chorein_N PF12624.7 BAM40507.1 - 1.5e-06 28.3 0.0 5.7e-06 26.4 0.0 2.1 1 0 0 1 1 1 1 N-terminal region of Chorein or VPS13 VPS13_C PF16909.5 BAM40507.1 - 0.0021 17.9 0.2 0.013 15.3 0.2 2.5 2 0 0 2 2 2 1 Vacuolar-sorting-associated 13 protein C-terminal zf-CCCH_4 PF18044.1 BAM40508.1 - 6.6e-07 29.0 7.2 5.4e-05 22.9 3.1 2.8 2 0 0 2 2 2 2 CCCH-type zinc finger zf-CCCH_2 PF14608.6 BAM40508.1 - 0.023 15.2 7.7 0.023 15.2 7.7 3.3 3 0 0 3 3 3 0 RNA-binding, Nab2-type zinc finger Torus PF16131.5 BAM40508.1 - 0.15 12.7 0.1 0.15 12.7 0.1 2.8 2 1 0 2 2 2 0 Torus domain zf-CCCH PF00642.24 BAM40508.1 - 0.88 9.6 20.8 0.027 14.4 3.4 4.2 4 0 0 4 4 4 0 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 BAM40508.1 - 4.3 7.5 20.9 0.31 11.2 3.4 3.9 4 0 0 4 4 4 0 Zinc finger domain NinG PF05766.12 BAM40510.1 - 0.025 14.5 6.0 0.12 12.3 3.0 2.5 2 0 0 2 2 2 0 Bacteriophage Lambda NinG protein Pox_Ag35 PF03286.14 BAM40510.1 - 0.062 13.1 15.3 0.048 13.4 0.5 2.4 2 0 0 2 2 2 0 Pox virus Ag35 surface protein DUF4665 PF15679.5 BAM40511.1 - 0.042 14.5 0.7 0.12 13.0 0.7 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4665) MAT1 PF06391.13 BAM40512.1 - 6.7 6.5 8.3 6.7 6.5 4.1 2.3 2 0 0 2 2 2 0 CDK-activating kinase assembly factor MAT1 Importin_rep_6 PF18829.1 BAM40512.1 - 8.4 6.6 8.0 2.4 8.4 2.8 2.3 2 0 0 2 2 2 0 Importin repeat 6 FUN14 PF04930.15 BAM40513.1 - 4.5e-11 43.0 2.6 5.7e-11 42.7 2.0 1.5 1 1 0 1 1 1 1 FUN14 family Glycoamylase PF10091.9 BAM40513.1 - 0.061 12.9 0.0 0.27 10.8 0.0 1.8 2 0 0 2 2 2 0 Putative glucoamylase TssN PF17555.2 BAM40515.1 - 0.39 10.1 10.5 0.048 13.0 5.8 1.7 2 0 0 2 2 2 0 Type VI secretion system, TssN zf-B_box PF00643.24 BAM40516.1 - 4.5e-05 23.5 11.8 7e-05 22.9 11.8 1.3 1 0 0 1 1 1 1 B-box zinc finger Phage_Mu_Gam PF07352.12 BAM40516.1 - 0.38 10.7 10.1 0.52 10.2 5.1 2.3 1 1 1 2 2 2 0 Bacteriophage Mu Gam like protein Exonuc_VII_L PF02601.15 BAM40516.1 - 1.1 8.8 6.1 1.4 8.4 6.1 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit WXG100 PF06013.12 BAM40516.1 - 1.2 9.4 5.5 0.86 9.9 2.3 2.3 3 0 0 3 3 3 0 Proteins of 100 residues with WXG DUF5344 PF17279.2 BAM40516.1 - 1.9 9.1 8.6 4 8.1 5.5 2.8 1 1 2 3 3 3 0 Family of unknown function (DUF5344) NEMO PF11577.8 BAM40516.1 - 5.9 7.0 10.6 0.22 11.5 3.0 2.5 3 1 0 3 3 3 0 NF-kappa-B essential modulator NEMO FHA PF00498.26 BAM40517.1 - 1.6e-19 70.0 0.0 3.1e-19 69.1 0.0 1.5 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 BAM40517.1 - 2e-08 34.5 0.0 3.7e-08 33.6 0.0 1.4 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain PI3_PI4_kinase PF00454.27 BAM40519.1 - 1.5e-26 93.7 0.2 1.5e-25 90.4 0.0 2.7 2 1 0 2 2 2 1 Phosphatidylinositol 3- and 4-kinase FATC PF02260.20 BAM40519.1 - 1.1e-08 34.7 0.1 3e-08 33.3 0.1 1.8 1 0 0 1 1 1 1 FATC domain ASF1_hist_chap PF04729.13 BAM40520.1 - 4.5e-59 198.8 0.0 7.8e-59 198.0 0.0 1.4 1 0 0 1 1 1 1 ASF1 like histone chaperone Cyto_heme_lyase PF01265.17 BAM40521.1 - 4.7e-44 151.1 12.4 2.6e-43 148.7 12.4 1.8 1 1 0 1 1 1 1 Cytochrome c/c1 heme lyase Fibrinogen_BP PF08017.11 BAM40521.1 - 0.16 10.4 0.1 0.2 10.0 0.1 1.1 1 0 0 1 1 1 0 Fibrinogen binding protein Isy1 PF06246.12 BAM40522.1 - 4.4e-66 223.1 2.8 4.8e-66 222.9 2.8 1.0 1 0 0 1 1 1 1 Isy1-like splicing family DASH_Duo1 PF08651.10 BAM40522.1 - 0.017 14.9 0.4 0.047 13.5 0.2 1.9 1 1 0 1 1 1 0 DASH complex subunit Duo1 CRAL_TRIO PF00650.20 BAM40523.1 - 5.5e-29 100.9 0.1 8.1e-29 100.4 0.1 1.3 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_N PF03765.15 BAM40523.1 - 2.3e-06 27.7 0.0 5.4e-06 26.5 0.0 1.7 1 0 0 1 1 1 1 CRAL/TRIO, N-terminal domain CRAL_TRIO_2 PF13716.6 BAM40523.1 - 7.2e-06 26.2 0.2 1.4e-05 25.2 0.2 1.6 1 1 0 1 1 1 1 Divergent CRAL/TRIO domain DUF4407 PF14362.6 BAM40525.1 - 0.16 11.3 0.1 0.45 9.8 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4407) ABC_tran PF00005.27 BAM40527.1 - 3.5e-33 115.0 0.0 4.8e-17 62.8 0.0 2.5 2 0 0 2 2 2 2 ABC transporter RsgA_GTPase PF03193.16 BAM40527.1 - 7.9e-06 25.9 0.8 0.026 14.4 0.0 2.7 3 0 0 3 3 2 2 RsgA GTPase Zeta_toxin PF06414.12 BAM40527.1 - 1.8e-05 24.1 0.1 0.062 12.6 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin AAA_29 PF13555.6 BAM40527.1 - 2.3e-05 24.0 0.6 0.042 13.6 0.1 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_30 PF13604.6 BAM40527.1 - 0.00051 19.8 0.4 0.034 13.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain MeaB PF03308.16 BAM40527.1 - 0.00097 18.2 0.1 0.36 9.8 0.1 2.3 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB ATP_bind_1 PF03029.17 BAM40527.1 - 0.0012 18.7 0.2 1.6 8.5 0.1 2.6 2 0 0 2 2 2 2 Conserved hypothetical ATP binding protein AAA_23 PF13476.6 BAM40527.1 - 0.0013 19.3 2.3 1.3 9.5 0.5 2.7 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 BAM40527.1 - 0.0025 18.2 0.1 0.39 11.1 0.0 2.4 2 0 0 2 2 2 1 AAA ATPase domain AAA_21 PF13304.6 BAM40527.1 - 0.0027 17.6 5.2 0.74 9.6 0.0 3.8 5 0 0 5 5 5 2 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 BAM40527.1 - 0.0058 16.7 0.3 1.4 9.0 0.1 3.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase TrwB_AAD_bind PF10412.9 BAM40527.1 - 0.0076 15.2 1.3 0.56 9.1 0.1 2.2 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_33 PF13671.6 BAM40527.1 - 0.0094 16.1 0.3 16 5.6 0.0 3.3 3 0 0 3 3 3 0 AAA domain T2SSE PF00437.20 BAM40527.1 - 0.0097 15.0 0.1 1.8 7.6 0.0 2.2 2 0 0 2 2 2 1 Type II/IV secretion system protein SMC_N PF02463.19 BAM40527.1 - 0.011 15.2 1.5 0.036 13.5 0.3 2.3 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 BAM40527.1 - 0.014 15.6 0.2 6.1 7.1 0.0 2.9 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 BAM40527.1 - 0.016 14.5 0.6 0.51 9.6 0.0 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family cobW PF02492.19 BAM40527.1 - 0.044 13.4 2.1 2 8.0 0.2 2.4 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain TsaE PF02367.17 BAM40527.1 - 0.085 12.9 0.2 12 5.9 0.0 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_25 PF13481.6 BAM40527.1 - 0.11 12.1 0.1 4.7 6.7 0.0 2.3 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 BAM40527.1 - 0.11 12.9 0.5 21 5.6 0.0 3.6 4 0 0 4 4 3 0 RNA helicase MobB PF03205.14 BAM40527.1 - 0.13 12.2 1.5 3.1 7.7 0.2 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B SRP54 PF00448.22 BAM40527.1 - 0.13 11.8 1.2 0.23 11.0 0.1 1.9 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_18 PF13238.6 BAM40527.1 - 0.15 12.6 0.1 33 5.0 0.0 2.6 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 BAM40527.1 - 0.36 10.9 5.0 4.3 7.4 0.2 2.8 2 0 0 2 2 2 0 Helicase HerA, central domain NB-ARC PF00931.22 BAM40527.1 - 0.62 9.2 2.5 0.64 9.2 0.1 2.1 2 0 0 2 2 2 0 NB-ARC domain Dynamin_N PF00350.23 BAM40527.1 - 0.78 9.8 3.6 2.1 8.4 0.3 2.9 3 0 0 3 3 3 0 Dynamin family NACHT PF05729.12 BAM40527.1 - 0.98 9.3 4.4 14 5.6 0.1 3.1 3 0 0 3 3 3 0 NACHT domain DUF815 PF05673.13 BAM40527.1 - 1.9 7.6 5.0 1.6 7.9 0.1 2.7 3 1 1 4 4 3 0 Protein of unknown function (DUF815) DUF4768 PF15989.5 BAM40530.1 - 0.34 10.9 1.3 0.92 9.5 1.3 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4768) Ribosomal_S5 PF00333.20 BAM40531.1 - 4e-27 94.0 1.2 9.4e-27 92.8 1.1 1.7 2 0 0 2 2 2 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 BAM40531.1 - 8.1e-23 79.7 0.0 1.3e-22 79.0 0.0 1.4 1 0 0 1 1 1 1 Ribosomal protein S5, C-terminal domain DUF1455 PF07306.11 BAM40531.1 - 0.048 13.6 0.1 7 6.6 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1455) DUF3389 PF11869.8 BAM40532.1 - 0.093 12.9 0.0 0.19 12.0 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3389) DHHC PF01529.20 BAM40534.1 - 3.3e-33 114.6 24.1 9e-33 113.2 16.4 2.1 2 0 0 2 2 2 2 DHHC palmitoyltransferase Ninjurin PF04923.12 BAM40534.1 - 5.5 7.0 14.6 0.26 11.3 1.5 2.6 2 1 0 2 2 2 0 Ninjurin DUF1516 PF07457.11 BAM40534.1 - 5.8 7.2 12.3 1.4 9.2 2.4 2.7 2 1 1 3 3 3 0 Protein of unknown function (DUF1516) ORC5_C PF14630.6 BAM40535.1 - 0.00021 20.9 13.3 0.062 12.8 0.0 3.9 3 2 0 3 3 3 2 Origin recognition complex (ORC) subunit 5 C-terminus Presenilin PF01080.17 BAM40535.1 - 0.33 9.7 16.7 0.47 9.2 11.7 2.4 2 0 0 2 2 2 0 Presenilin DUF3091 PF11291.8 BAM40537.1 - 0.0064 16.6 1.8 0.0064 16.6 1.8 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF3091) Zn-ribbon_8 PF09723.10 BAM40538.1 - 0.0057 16.8 1.1 0.016 15.3 1.1 1.8 1 0 0 1 1 1 1 Zinc ribbon domain TF_Zn_Ribbon PF08271.12 BAM40538.1 - 1.5 8.4 7.2 8.1 6.0 7.2 2.2 1 1 0 1 1 1 0 TFIIB zinc-binding DUF2072 PF09845.9 BAM40538.1 - 2.4 8.4 14.1 0.041 14.1 0.8 3.6 3 1 0 3 3 3 0 Zn-ribbon containing protein PhoLip_ATPase_C PF16212.5 BAM40539.1 - 1e-38 133.5 23.1 1e-38 133.5 23.1 3.0 3 0 0 3 3 3 1 Phospholipid-translocating P-type ATPase C-terminal Hydrolase PF00702.26 BAM40539.1 - 5.9e-13 49.6 0.0 0.00016 22.1 0.0 3.5 3 0 0 3 3 3 3 haloacid dehalogenase-like hydrolase PhoLip_ATPase_N PF16209.5 BAM40539.1 - 1.5e-12 47.0 2.4 4.8e-12 45.4 2.4 1.9 1 0 0 1 1 1 1 Phospholipid-translocating ATPase N-terminal E1-E2_ATPase PF00122.20 BAM40539.1 - 3.6e-09 36.4 1.2 0.00022 20.8 0.0 3.2 3 0 0 3 3 3 2 E1-E2 ATPase Cation_ATPase PF13246.6 BAM40539.1 - 9.9e-09 35.2 0.0 3.6e-08 33.4 0.0 1.9 2 0 0 2 2 2 1 Cation transport ATPase (P-type) Hydrolase_3 PF08282.12 BAM40539.1 - 0.0037 17.0 1.4 0.0092 15.7 0.1 2.2 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase DNA_topoisoIV PF00521.20 BAM40540.1 - 5.3e-121 404.5 1.3 1e-120 403.6 1.3 1.5 1 0 0 1 1 1 1 DNA gyrase/topoisomerase IV, subunit A AMIN PF11741.8 BAM40540.1 - 0.13 12.5 4.2 0.13 12.4 1.1 2.6 2 0 0 2 2 2 0 AMIN domain Brr6_like_C_C PF10104.9 BAM40541.1 - 8.3e-29 100.1 6.1 1.5e-28 99.3 6.1 1.3 1 0 0 1 1 1 1 Di-sulfide bridge nucleocytoplasmic transport domain PCI PF01399.27 BAM40542.1 - 1.4e-15 57.7 0.4 5.9e-15 55.7 0.4 2.1 1 0 0 1 1 1 1 PCI domain eIF-1a PF01176.19 BAM40543.1 - 1.2e-21 76.2 0.0 1.7e-21 75.8 0.0 1.2 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 RNA_pol_A_bac PF01000.26 BAM40544.1 - 6.2e-27 94.2 0.0 1.2e-26 93.3 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 BAM40544.1 - 1.7e-15 56.2 0.0 3.1e-15 55.4 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Fer4_9 PF13187.6 BAM40544.1 - 0.012 15.8 0.5 0.022 14.9 0.5 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain DUF2207 PF09972.9 BAM40545.1 - 0.00071 18.5 6.1 0.00081 18.3 6.1 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2207) Popeye PF04831.13 BAM40545.1 - 0.042 14.0 3.4 0.054 13.7 3.4 1.1 1 0 0 1 1 1 0 Popeye protein conserved region CoA_binding_3 PF13727.6 BAM40545.1 - 0.24 11.4 4.6 0.26 11.3 4.6 1.1 1 0 0 1 1 1 0 CoA-binding domain DUF3043 PF11241.8 BAM40545.1 - 0.47 10.5 1.4 0.5 10.4 1.4 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3043) PepSY_TM_like_2 PF16357.5 BAM40545.1 - 1.7 8.6 6.8 2.1 8.3 6.8 1.1 1 0 0 1 1 1 0 Putative PepSY_TM-like ABC2_membrane_3 PF12698.7 BAM40545.1 - 3 6.9 9.9 3.1 6.8 9.9 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Wzz PF02706.15 BAM40545.1 - 5.1 7.5 7.7 0.98 9.8 0.5 2.1 2 0 0 2 2 2 0 Chain length determinant protein FAINT PF04385.15 BAM40547.1 - 7.4e-48 160.5 83.3 3.4e-06 27.0 0.0 29.4 30 0 0 30 30 30 17 Domain of unknown function, DUF529 SnoaL_3 PF13474.6 BAM40547.1 - 0.085 13.1 0.0 0.5 10.6 0.0 2.5 1 0 0 1 1 1 0 SnoaL-like domain DUF948 PF06103.11 BAM40547.1 - 0.19 12.0 2.2 1.2 9.4 2.2 2.4 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF948) Kre28 PF17097.5 BAM40547.1 - 0.37 9.7 5.1 0.97 8.3 5.1 1.6 1 0 0 1 1 1 0 Spindle pole body component Secretin_N_2 PF07655.13 BAM40549.1 - 3.3 8.3 14.6 3.7 8.2 14.6 1.1 1 0 0 1 1 1 0 Secretin N-terminal domain FAINT PF04385.15 BAM40551.1 - 3e-07 30.4 13.1 0.0013 18.8 0.4 5.7 5 1 0 5 5 5 3 Domain of unknown function, DUF529 DDRGK PF09756.9 BAM40552.1 - 0.03 13.9 8.3 0.053 13.1 7.7 1.8 1 1 0 1 1 1 0 DDRGK domain Ribosomal_S14 PF00253.21 BAM40553.1 - 0.0025 17.6 0.8 0.0025 17.6 0.8 2.1 2 0 0 2 2 2 1 Ribosomal protein S14p/S29e DUF3221 PF11518.8 BAM40554.1 - 0.09 13.1 0.3 0.58 10.6 0.3 2.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3221) Pox_A21 PF05323.12 BAM40556.1 - 0.019 15.5 2.0 0.026 15.1 2.0 1.2 1 0 0 1 1 1 0 Poxvirus A21 Protein HSP70 PF00012.20 BAM40557.1 - 6.9e-266 883.2 7.4 8.1e-266 883.0 7.4 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 BAM40557.1 - 3.5e-16 58.9 2.9 8.1e-15 54.5 0.5 2.5 2 1 0 2 2 2 2 MreB/Mbl protein FGGY_C PF02782.16 BAM40557.1 - 0.00052 19.8 0.0 0.0015 18.3 0.0 1.8 2 0 0 2 2 2 1 FGGY family of carbohydrate kinases, C-terminal domain FtsA PF14450.6 BAM40557.1 - 0.012 16.0 2.8 8.7 6.8 0.0 3.6 3 2 0 3 3 3 0 Cell division protein FtsA TPD52 PF04201.15 BAM40557.1 - 0.021 14.5 4.0 0.044 13.4 4.0 1.6 1 0 0 1 1 1 0 Tumour protein D52 family FadA PF09403.10 BAM40558.1 - 0.4 11.2 3.1 3.9 8.0 0.0 3.5 3 1 1 4 4 4 0 Adhesion protein FadA eRF1_2 PF03464.15 BAM40559.1 - 6.5e-46 155.9 0.0 1.2e-45 155.0 0.0 1.5 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 BAM40559.1 - 8.2e-28 97.2 0.3 3.5e-27 95.1 0.3 2.1 1 1 0 1 1 1 1 eRF1 domain 3 eRF1_1 PF03463.15 BAM40559.1 - 4.2e-21 75.3 0.0 9.4e-21 74.2 0.0 1.6 1 0 0 1 1 1 1 eRF1 domain 1 baeRF_family10 PF18854.1 BAM40559.1 - 5.4e-10 39.7 0.0 3.1e-09 37.2 0.0 1.9 2 0 0 2 2 2 1 Bacterial archaeo-eukaryotic release factor family 10 acVLRF1 PF18859.1 BAM40559.1 - 2.3e-08 34.4 0.0 3.6e-08 33.8 0.0 1.3 1 0 0 1 1 1 1 Actinobacteria/chloroflexi VLRF1 release factor DUF5643 PF18705.1 BAM40559.1 - 0.12 12.4 2.2 0.27 11.2 0.0 2.6 2 1 0 2 2 2 0 Family of unknown function (DUF5643) PPR_2 PF13041.6 BAM40562.1 - 3.5e-33 113.6 11.8 3.4e-10 39.9 0.0 7.9 6 1 3 9 9 9 6 PPR repeat family PPR PF01535.20 BAM40562.1 - 9.7e-21 72.5 18.7 8.1e-05 22.6 0.1 8.9 9 1 0 9 9 9 5 PPR repeat PPR_3 PF13812.6 BAM40562.1 - 9.3e-19 67.3 3.8 2.5e-07 30.7 0.1 5.5 4 1 3 7 7 7 5 Pentatricopeptide repeat domain PPR_long PF17177.4 BAM40562.1 - 7.8e-16 58.1 0.3 7e-11 41.9 0.0 3.4 1 1 2 3 3 3 2 Pentacotripeptide-repeat region of PRORP PPR_1 PF12854.7 BAM40562.1 - 7.9e-09 35.1 6.6 0.33 10.7 0.0 7.1 8 0 0 8 8 8 3 PPR repeat zf-RING_9 PF13901.6 BAM40562.1 - 0.14 12.2 1.8 0.68 9.9 0.2 2.6 2 0 0 2 2 2 0 Putative zinc-RING and/or ribbon FAINT PF04385.15 BAM40563.1 - 1.2e-15 57.3 37.4 3.7e-05 23.7 1.8 5.4 6 1 0 6 6 6 4 Domain of unknown function, DUF529 FAINT PF04385.15 BAM40564.1 - 2.8e-07 30.5 0.1 0.0056 16.7 0.0 2.7 2 0 0 2 2 2 2 Domain of unknown function, DUF529 FAINT PF04385.15 BAM40565.1 - 2.8e-06 27.3 3.1 5.9e-06 26.3 3.1 1.5 1 0 0 1 1 1 1 Domain of unknown function, DUF529 FAINT PF04385.15 BAM40566.1 - 5.2e-50 167.4 127.8 3.7e-07 30.1 2.9 21.0 20 0 0 20 20 20 19 Domain of unknown function, DUF529 Dioxygenase_C PF00775.21 BAM40566.1 - 0.045 13.2 5.4 1.5 8.2 0.1 5.1 5 0 0 5 5 5 0 Dioxygenase GUCT PF08152.12 BAM40566.1 - 0.4 11.0 1.8 36 4.7 0.1 2.9 2 0 0 2 2 2 0 GUCT (NUC152) domain DUF5085 PF16895.5 BAM40567.1 - 0.039 14.3 0.1 0.044 14.1 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5085) FAINT PF04385.15 BAM40568.1 - 5.9e-30 103.2 56.4 0.00012 22.1 1.7 11.6 12 0 0 12 12 12 9 Domain of unknown function, DUF529 MPDZ_u10 PF16667.5 BAM40571.1 - 0.07 14.0 0.3 0.071 14.0 0.3 1.1 1 0 0 1 1 1 0 Unstructured region 10 on multiple PDZ protein PIF PF05092.12 BAM40572.1 - 0.11 11.2 0.2 0.12 11.1 0.2 1.1 1 0 0 1 1 1 0 Per os infectivity DUF5595 PF18077.1 BAM40572.1 - 2.3 8.4 7.7 25 5.0 0.1 3.8 3 1 1 4 4 4 0 Domain of unknown function (DUF5595) CENP-H PF05837.12 BAM40574.1 - 0.24 11.8 5.7 0.32 11.4 5.7 1.1 1 0 0 1 1 1 0 Centromere protein H (CENP-H) FapA PF03961.13 BAM40574.1 - 0.6 8.6 5.8 0.8 8.2 5.8 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A EPL1 PF10513.9 BAM40575.1 - 0.00013 22.4 0.2 0.00024 21.5 0.2 1.5 1 0 0 1 1 1 1 Enhancer of polycomb-like Presenilin PF01080.17 BAM40576.1 - 0.12 11.2 2.1 0.14 10.9 2.1 1.0 1 0 0 1 1 1 0 Presenilin DUF4834 PF16118.5 BAM40576.1 - 0.21 12.6 3.6 1.9 9.5 3.6 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4834) Med3 PF11593.8 BAM40576.1 - 0.25 10.5 7.6 0.31 10.2 7.6 1.0 1 0 0 1 1 1 0 Mediator complex subunit 3 fungal UCH PF00443.29 BAM40578.1 - 4.8e-27 95.1 0.0 9.5e-27 94.1 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase zf-UBP PF02148.19 BAM40578.1 - 1.4e-10 41.4 6.9 1.4e-10 41.4 6.9 1.8 2 0 0 2 2 2 1 Zn-finger in ubiquitin-hydrolases and other protein FAINT PF04385.15 BAM40579.1 - 0.0011 18.9 0.5 0.0034 17.4 0.4 1.9 2 0 0 2 2 2 1 Domain of unknown function, DUF529 FAINT PF04385.15 BAM40580.1 - 1.3e-12 47.6 10.9 0.0036 17.3 0.0 4.7 4 0 0 4 4 4 4 Domain of unknown function, DUF529 DUF4467 PF14729.6 BAM40580.1 - 0.18 12.1 1.0 0.68 10.3 0.0 2.4 3 0 0 3 3 3 0 Domain of unknown function with cystatin-like fold (DUF4467) FAINT PF04385.15 BAM40581.1 - 2e-18 66.2 50.8 0.00034 20.6 4.0 5.6 5 0 0 5 5 5 5 Domain of unknown function, DUF529 FAINT PF04385.15 BAM40582.1 - 1.5e-14 53.8 16.1 7.1e-06 26.0 5.0 3.8 3 1 0 3 3 3 3 Domain of unknown function, DUF529 CPSF_A PF03178.15 BAM40583.1 - 8.8e-16 58.1 3.0 4.4e-11 42.7 1.0 2.3 2 0 0 2 2 2 2 CPSF A subunit region BBS2_N PF14781.6 BAM40583.1 - 0.046 13.6 1.4 20 5.1 0.0 3.9 4 0 0 4 4 4 0 Ciliary BBSome complex subunit 2, N-terminal PepX_N PF09168.10 BAM40583.1 - 2.7 8.4 4.6 4.4 7.7 0.0 3.1 4 0 0 4 4 4 0 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal GAF PF01590.26 BAM40584.1 - 2.7e-10 41.0 0.0 0.0013 19.3 0.0 3.4 3 0 0 3 3 3 2 GAF domain GAF_3 PF13492.6 BAM40584.1 - 1.5e-06 28.6 0.0 0.03 14.7 0.0 3.4 4 0 0 4 4 4 2 GAF domain GAF_2 PF13185.6 BAM40584.1 - 2e-05 24.9 0.0 0.0072 16.6 0.0 3.1 3 0 0 3 3 3 1 GAF domain FAINT PF04385.15 BAM40585.1 - 4.4e-06 26.6 20.0 0.0013 18.8 6.2 4.5 3 1 0 3 3 3 2 Domain of unknown function, DUF529 FAINT PF04385.15 BAM40586.1 - 1.1e-35 121.5 85.7 2.7e-06 27.3 2.4 11.9 11 0 0 11 11 11 11 Domain of unknown function, DUF529 APG6_N PF17675.1 BAM40587.1 - 0.0063 17.1 3.2 0.0063 17.1 3.2 2.3 2 0 0 2 2 2 1 Apg6 coiled-coil region DUF3713 PF12506.8 BAM40587.1 - 0.057 13.7 6.2 1.6 9.1 0.9 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3713) BRE1 PF08647.11 BAM40587.1 - 0.51 10.5 10.3 0.086 12.9 2.2 3.0 3 0 0 3 3 3 0 BRE1 E3 ubiquitin ligase PMC2NT PF08066.12 BAM40587.1 - 0.71 10.6 5.3 1.5 9.5 0.1 2.9 2 1 0 2 2 2 0 PMC2NT (NUC016) domain Snf7 PF03357.21 BAM40587.1 - 0.97 9.0 6.7 0.3 10.7 1.5 2.4 3 0 0 3 3 3 0 Snf7 Seryl_tRNA_N PF02403.22 BAM40587.1 - 1.6 9.0 10.5 3.1 8.1 3.0 2.6 3 0 0 3 3 3 0 Seryl-tRNA synthetase N-terminal domain Goodbye PF17109.5 BAM40587.1 - 2.9 8.4 5.2 15 6.0 0.4 2.9 2 1 1 3 3 3 0 fungal STAND N-terminal Goodbye domain FapA PF03961.13 BAM40587.1 - 5.5 5.5 10.4 1.6 7.2 3.0 2.0 1 1 1 2 2 2 0 Flagellar Assembly Protein A Fez1 PF06818.15 BAM40587.1 - 7.1 7.0 11.7 0.33 11.4 3.0 2.2 2 1 0 2 2 2 0 Fez1 TMPIT PF07851.13 BAM40587.1 - 7.1 5.8 8.0 1.5 8.0 2.1 2.0 2 0 0 2 2 2 0 TMPIT-like protein tRNA-synt_2 PF00152.20 BAM40588.1 - 3.5e-75 253.0 0.2 2.6e-65 220.5 0.1 2.4 2 0 0 2 2 2 2 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 BAM40588.1 - 1.6e-10 40.8 0.1 4.2e-10 39.5 0.1 1.7 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 BAM40588.1 - 0.002 17.6 0.1 0.014 14.9 0.1 2.1 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) CDT1 PF08839.11 BAM40588.1 - 0.02 15.2 0.4 5.5 7.2 0.0 2.5 2 0 0 2 2 2 0 DNA replication factor CDT1 like Mucin PF01456.17 BAM40588.1 - 2 8.4 18.0 4.2 7.4 18.0 1.5 1 0 0 1 1 1 0 Mucin-like glycoprotein FAINT PF04385.15 BAM40589.1 - 0.0053 16.8 1.1 0.024 14.7 0.3 2.3 2 0 0 2 2 2 1 Domain of unknown function, DUF529 DUF4605 PF15378.6 BAM40589.1 - 0.015 15.2 3.9 0.028 14.3 3.9 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4605) RmuC PF02646.16 BAM40590.1 - 0.091 11.9 0.0 0.29 10.2 0.0 1.7 2 0 0 2 2 2 0 RmuC family Methyltransf_16 PF10294.9 BAM40591.1 - 5.6e-26 91.3 0.0 1.5e-25 89.9 0.0 1.8 1 0 0 1 1 1 1 Lysine methyltransferase Ank_2 PF12796.7 BAM40591.1 - 1.2e-09 38.6 1.1 1.4e-07 32.0 0.2 2.7 2 0 0 2 2 2 1 Ankyrin repeats (3 copies) Ank_4 PF13637.6 BAM40591.1 - 5.1e-06 26.9 2.8 0.052 14.2 0.2 3.7 2 1 2 4 4 4 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 BAM40591.1 - 3.4e-05 24.0 2.2 3 8.3 0.4 3.7 2 1 0 3 3 3 2 Ankyrin repeats (many copies) Ank_3 PF13606.6 BAM40591.1 - 0.00011 22.3 0.1 0.27 11.9 0.0 3.8 3 0 0 3 3 3 1 Ankyrin repeat Methyltransf_25 PF13649.6 BAM40591.1 - 0.0022 18.7 0.0 0.0082 16.8 0.0 2.0 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 BAM40591.1 - 0.0035 16.9 0.0 0.0097 15.5 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_12 PF08242.12 BAM40591.1 - 0.0047 17.6 0.0 0.022 15.5 0.0 2.2 1 0 0 1 1 1 1 Methyltransferase domain Ank PF00023.30 BAM40591.1 - 0.015 15.8 0.0 14 6.3 0.0 3.2 2 0 0 2 2 2 0 Ankyrin repeat T4SS PF07996.11 BAM40591.1 - 0.022 15.2 0.1 2.2 8.7 0.0 2.3 2 0 0 2 2 2 0 Type IV secretion system proteins BORCS7 PF16088.5 BAM40591.1 - 0.091 13.0 1.6 0.84 9.9 2.8 1.9 2 0 0 2 2 1 0 BLOC-1-related complex sub-unit 7 ING PF12998.7 BAM40591.1 - 0.28 11.8 4.6 1 10.0 4.6 2.0 1 1 0 1 1 1 0 Inhibitor of growth proteins N-terminal histone-binding DUF16 PF01519.16 BAM40591.1 - 0.32 11.5 5.0 6.4 7.3 0.2 2.6 2 0 0 2 2 2 0 Protein of unknown function DUF16 JAKMIP_CC3 PF16034.5 BAM40591.1 - 0.47 10.4 6.8 1.9 8.4 6.8 2.0 1 1 0 1 1 1 0 JAKMIP CC3 domain TSC22 PF01166.18 BAM40591.1 - 0.69 10.3 9.5 0.45 10.9 0.6 3.4 3 0 0 3 3 3 0 TSC-22/dip/bun family EELM2 PF15863.5 BAM40592.1 - 1.2e-71 240.3 2.5 2.1e-71 239.6 2.5 1.4 1 0 0 1 1 1 1 Extended EGL-27 and MTA1 homology domain OTU PF02338.19 BAM40593.1 - 5.7e-24 85.0 0.4 5.7e-24 85.0 0.4 2.0 2 1 0 2 2 2 1 OTU-like cysteine protease Peptidase_C65 PF10275.9 BAM40593.1 - 1.4e-06 27.9 0.1 0.0011 18.5 0.0 2.4 2 1 0 2 2 2 2 Peptidase C65 Otubain DUF4208 PF13907.6 BAM40595.1 - 0.068 13.6 0.1 0.13 12.7 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4208) PH_12 PF16457.5 BAM40596.1 - 0.00013 22.5 0.0 0.00017 22.1 0.0 1.2 1 0 0 1 1 1 1 Pleckstrin homology domain PH_2 PF08458.10 BAM40596.1 - 0.0018 18.6 0.0 0.0029 17.9 0.0 1.3 1 1 0 1 1 1 1 Plant pleckstrin homology-like region DUF3552 PF12072.8 BAM40597.1 - 0.0001 21.8 32.1 0.0018 17.7 14.3 2.5 2 1 1 3 3 3 2 Domain of unknown function (DUF3552) Spc7 PF08317.11 BAM40597.1 - 0.009 14.9 18.3 0.018 14.0 18.3 1.4 1 0 0 1 1 1 1 Spc7 kinetochore protein DUF4200 PF13863.6 BAM40597.1 - 0.034 14.5 3.7 0.034 14.5 3.7 3.4 2 1 0 3 3 3 0 Domain of unknown function (DUF4200) DUF2582 PF10771.9 BAM40597.1 - 0.076 13.2 0.0 0.32 11.2 0.0 2.1 1 0 0 1 1 1 0 Winged helix-turn-helix domain (DUF2582) ATG16 PF08614.11 BAM40597.1 - 0.69 10.1 26.8 0.33 11.1 23.8 2.0 2 1 0 2 2 2 0 Autophagy protein 16 (ATG16) Atg14 PF10186.9 BAM40597.1 - 0.81 8.7 19.0 0.23 10.5 15.5 1.7 2 0 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 COG2 PF06148.11 BAM40597.1 - 1.2 9.2 8.4 0.52 10.4 1.1 2.6 1 1 1 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 YnfE PF17452.2 BAM40597.1 - 9.3 6.6 6.9 69 3.8 2.9 3.1 1 1 2 3 3 3 0 Uncharacterized YnfE-like Fez1 PF06818.15 BAM40597.1 - 9.9 6.6 19.9 72 3.7 20.0 2.1 1 1 0 1 1 1 0 Fez1 PIG-H PF10181.9 BAM40598.1 - 2.7e-13 49.6 0.4 4.7e-13 48.8 0.4 1.4 1 0 0 1 1 1 1 GPI-GlcNAc transferase complex, PIG-H component EbsA PF17255.2 BAM40598.1 - 0.045 14.1 4.5 0.092 13.1 4.5 1.5 1 1 0 1 1 1 0 EbsA-like protein SUB1_ProdP9 PF18213.1 BAM40598.1 - 0.13 12.1 0.9 17 5.3 0.2 2.5 1 1 1 2 2 2 0 SUB1 protease Prodomain ProdP9 Glycos_transf_2 PF00535.26 BAM40599.1 - 1.2e-31 109.8 0.0 1.5e-31 109.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 BAM40599.1 - 7.1e-09 35.9 0.0 7.9e-09 35.7 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 BAM40599.1 - 0.0016 18.0 0.0 0.0021 17.6 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 BAM40599.1 - 0.0061 16.1 0.0 0.0095 15.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_4 PF13704.6 BAM40599.1 - 0.048 14.2 0.0 0.28 11.7 0.0 2.1 2 0 0 2 2 2 0 Glycosyl transferase family 2 Glyco_transf_7N PF13733.6 BAM40599.1 - 0.17 11.5 0.0 0.46 10.1 0.0 1.6 2 0 0 2 2 2 0 N-terminal region of glycosyl transferase group 7 FAINT PF04385.15 BAM40600.1 - 8.7e-11 41.7 21.1 1.8e-05 24.7 0.2 4.3 4 0 0 4 4 4 3 Domain of unknown function, DUF529 DUF1640 PF07798.11 BAM40600.1 - 0.049 13.7 3.7 0.6 10.1 0.1 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF1640) ASD2 PF08687.11 BAM40600.1 - 0.089 12.3 0.2 0.26 10.8 0.2 1.7 1 0 0 1 1 1 0 Apx/Shroom domain ASD2 FAINT PF04385.15 BAM40601.1 - 1.3e-11 44.3 26.0 7.1e-05 22.8 1.0 5.9 5 1 0 5 5 5 5 Domain of unknown function, DUF529 FAINT PF04385.15 BAM40602.1 - 1.5e-36 124.3 103.7 4.4e-05 23.5 4.6 14.5 14 0 0 14 14 14 13 Domain of unknown function, DUF529 DUF3823 PF12866.7 BAM40602.1 - 0.0099 16.2 1.3 0.36 11.2 0.0 3.6 2 1 1 3 3 3 1 Protein of unknown function (DUF3823) N-terminal domain UPF0242 PF06785.11 BAM40602.1 - 0.052 13.7 9.4 0.85 9.7 1.5 2.9 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0242) N-terminus Glyco_hydro_2 PF00703.21 BAM40602.1 - 0.17 12.6 8.9 16 6.2 0.2 6.2 6 0 0 6 6 6 0 Glycosyl hydrolases family 2 CTP_transf_like PF01467.26 BAM40604.1 - 1.5e-49 167.8 1.8 6.4e-25 88.0 0.1 2.6 3 0 0 3 3 3 2 Cytidylyltransferase-like FAD_syn PF06574.12 BAM40604.1 - 0.0016 18.3 0.7 0.037 13.9 0.3 3.1 3 0 0 3 3 3 1 FAD synthetase WW PF00397.26 BAM40605.1 - 7.8e-16 57.9 13.8 7.5e-09 35.5 1.9 3.1 3 0 0 3 3 3 2 WW domain FF PF01846.19 BAM40605.1 - 2.6e-09 37.1 0.1 6.1e-07 29.5 0.2 5.1 6 0 0 6 6 6 2 FF domain Glyco_hyd_101C PF17451.2 BAM40605.1 - 0.28 11.5 8.3 0.98 9.7 0.0 3.2 2 2 1 3 3 3 0 Glycosyl hydrolase 101 beta sandwich domain SNAP PF14938.6 BAM40606.1 - 4.8e-70 236.2 11.3 5.5e-70 236.0 11.3 1.0 1 0 0 1 1 1 1 Soluble NSF attachment protein, SNAP TPR_2 PF07719.17 BAM40606.1 - 8.5e-06 25.5 3.0 0.015 15.4 0.1 4.4 4 1 1 5 5 5 1 Tetratricopeptide repeat TPR_12 PF13424.6 BAM40606.1 - 1.8e-05 24.9 4.0 0.1 12.9 0.6 3.6 2 2 1 3 3 3 2 Tetratricopeptide repeat TPR_6 PF13174.6 BAM40606.1 - 0.0044 17.6 4.6 35 5.3 0.2 4.8 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_14 PF13428.6 BAM40606.1 - 0.017 15.9 0.3 9 7.4 0.0 3.7 4 1 1 5 5 5 0 Tetratricopeptide repeat TPR_1 PF00515.28 BAM40606.1 - 0.029 14.2 12.3 0.08 12.8 0.3 4.5 5 0 0 5 5 5 0 Tetratricopeptide repeat TOPRIM_C PF16898.5 BAM40606.1 - 0.031 14.6 7.3 0.22 11.8 1.8 2.7 2 1 0 2 2 2 0 C-terminal associated domain of TOPRIM TPR_7 PF13176.6 BAM40606.1 - 0.097 12.7 6.9 1.4 9.1 0.1 4.1 3 1 1 4 4 4 0 Tetratricopeptide repeat DUF1327 PF07041.11 BAM40606.1 - 0.15 12.0 0.8 1.2 9.2 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1327) TPR_10 PF13374.6 BAM40606.1 - 0.23 11.4 4.9 56 3.8 0.0 4.4 4 1 1 5 5 5 0 Tetratricopeptide repeat MIT PF04212.18 BAM40606.1 - 0.38 10.8 9.8 7.3 6.7 0.4 3.5 3 0 0 3 3 3 0 MIT (microtubule interacting and transport) domain TPR_19 PF14559.6 BAM40606.1 - 1.3 9.6 4.6 6.4 7.4 0.1 3.2 3 1 0 3 3 3 0 Tetratricopeptide repeat CDP-OH_P_transf PF01066.21 BAM40607.1 - 3.1e-12 47.1 0.1 3.1e-12 47.1 0.1 2.8 3 1 0 3 3 3 1 CDP-alcohol phosphatidyltransferase GCD14 PF08704.10 BAM40608.1 - 3.8e-51 174.2 0.2 2.3e-49 168.3 0.0 2.7 1 1 1 2 2 2 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_31 PF13847.6 BAM40608.1 - 1.7e-06 27.9 0.0 1.5e-05 24.9 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 BAM40608.1 - 1.2e-05 25.2 0.0 0.00085 19.1 0.0 2.2 1 1 1 2 2 2 2 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_24 PF13578.6 BAM40608.1 - 0.00074 20.5 0.0 0.0013 19.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 BAM40608.1 - 0.0015 17.7 0.0 0.0033 16.6 0.0 1.5 2 0 0 2 2 2 1 O-methyltransferase Methyltransf_25 PF13649.6 BAM40608.1 - 0.064 14.0 0.0 0.24 12.1 0.0 2.0 1 1 1 2 2 2 0 Methyltransferase domain Methyltransf_23 PF13489.6 BAM40608.1 - 0.14 12.0 0.0 0.36 10.6 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain FAINT PF04385.15 BAM40609.1 - 0.0039 17.2 6.2 0.0086 16.1 5.9 1.8 1 1 0 1 1 1 1 Domain of unknown function, DUF529 Peptidase_C1 PF00112.23 BAM40610.1 - 1.8e-31 109.9 3.4 1.8e-31 109.9 3.4 2.1 2 0 0 2 2 2 1 Papain family cysteine protease CathepsinC_exc PF08773.11 BAM40610.1 - 3.7e-12 46.6 5.2 1.9e-10 41.1 5.2 3.2 1 1 0 1 1 1 1 Cathepsin C exclusion domain Peptidase_C1_2 PF03051.15 BAM40610.1 - 0.0051 15.6 1.3 0.015 14.1 0.7 1.9 2 0 0 2 2 2 1 Peptidase C1-like family SRR PF07709.11 BAM40610.1 - 1.7 9.4 4.6 58 4.8 0.7 4.4 4 0 0 4 4 4 0 Seven Residue Repeat zf_CCCH_4 PF18345.1 BAM40611.1 - 1.1e-07 31.6 1.1 2.8e-07 30.4 1.1 1.7 1 0 0 1 1 1 1 Zinc finger domain Torus PF16131.5 BAM40611.1 - 5.7e-05 23.8 0.0 0.0001 22.9 0.0 1.5 1 0 0 1 1 1 1 Torus domain zf-CCCH_4 PF18044.1 BAM40611.1 - 0.00011 21.9 1.1 0.00022 21.0 1.1 1.6 1 0 0 1 1 1 1 CCCH-type zinc finger zf-CCCH PF00642.24 BAM40611.1 - 0.00014 21.7 2.0 0.00016 21.5 0.5 2.0 2 0 0 2 2 2 1 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf-CCCH_2 PF14608.6 BAM40611.1 - 0.0033 17.8 0.5 0.011 16.2 0.5 2.0 1 0 0 1 1 1 1 RNA-binding, Nab2-type zinc finger zf-CCCH_3 PF15663.5 BAM40611.1 - 0.025 14.8 0.1 0.025 14.8 0.1 1.7 2 0 0 2 2 2 0 Zinc-finger containing family Lipase_2 PF01674.18 BAM40611.1 - 0.12 11.9 0.0 0.19 11.2 0.0 1.2 1 0 0 1 1 1 0 Lipase (class 2) FYVE PF01363.21 BAM40611.1 - 2.9 8.1 7.7 0.71 10.1 4.0 2.2 2 1 0 2 2 2 0 FYVE zinc finger EF-hand_6 PF13405.6 BAM40612.1 - 0.0017 18.1 0.2 0.007 16.2 0.2 2.1 1 0 0 1 1 1 1 EF-hand domain EF-hand_8 PF13833.6 BAM40612.1 - 0.0048 16.7 0.2 0.021 14.7 0.2 2.1 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_7 PF13499.6 BAM40612.1 - 0.0066 16.9 0.7 0.073 13.5 0.2 2.4 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_1 PF00036.32 BAM40612.1 - 0.014 14.9 3.8 0.019 14.5 1.3 2.6 2 1 0 2 2 2 0 EF hand EF-hand_5 PF13202.6 BAM40612.1 - 0.14 11.7 3.1 0.17 11.4 0.6 2.4 2 0 0 2 2 2 0 EF hand Myb_DNA-binding PF00249.31 BAM40614.1 - 4.5e-17 62.0 0.1 4.9e-07 29.8 0.0 3.9 4 0 0 4 4 4 2 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 BAM40614.1 - 3.7e-13 49.5 0.0 5.3e-06 26.6 0.0 3.5 2 1 1 3 3 3 2 Myb-like DNA-binding domain Myb_DNA-bind_4 PF13837.6 BAM40614.1 - 4.1e-05 23.9 1.1 0.14 12.6 0.0 3.8 3 0 0 3 3 3 2 Myb/SANT-like DNA-binding domain Sec20 PF03908.13 BAM40614.1 - 0.73 9.8 3.3 1.2 9.1 0.9 2.4 1 1 1 2 2 2 0 Sec20 Pkinase PF00069.25 BAM40615.1 - 1.2e-28 100.3 1.0 4.3e-27 95.1 1.0 2.8 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM40615.1 - 4.1e-12 45.9 0.0 1.1e-11 44.6 0.0 1.7 1 0 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 BAM40615.1 - 0.0013 18.1 0.0 0.0019 17.6 0.0 1.2 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 BAM40615.1 - 0.02 14.8 0.1 0.038 13.9 0.1 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family Haspin_kinase PF12330.8 BAM40615.1 - 0.098 11.6 0.2 0.098 11.6 0.2 1.7 2 0 0 2 2 2 0 Haspin like kinase domain Kinase-like PF14531.6 BAM40615.1 - 0.13 11.6 0.1 5.1 6.3 0.0 2.2 2 0 0 2 2 2 0 Kinase-like Arf PF00025.21 BAM40616.1 - 2.1e-14 53.3 0.0 2.1e-13 50.1 0.0 1.9 1 1 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 BAM40616.1 - 0.00027 21.0 0.1 0.0017 18.4 0.1 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 BAM40616.1 - 0.00066 19.2 0.1 0.0021 17.5 0.1 1.8 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_35 PF14516.6 BAM40616.1 - 0.0065 15.3 0.0 0.013 14.3 0.0 1.5 1 0 0 1 1 1 1 AAA-like domain AAA_14 PF13173.6 BAM40616.1 - 0.0096 16.0 0.3 0.043 13.8 0.3 2.2 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 BAM40616.1 - 0.027 14.2 3.4 0.059 13.1 3.3 1.5 1 1 0 1 1 1 0 AAA ATPase domain Roc PF08477.13 BAM40616.1 - 0.035 14.3 0.0 0.068 13.4 0.0 1.6 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_16 PF13191.6 BAM40616.1 - 0.04 14.3 0.0 0.067 13.6 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain ATPase_2 PF01637.18 BAM40616.1 - 0.068 13.1 0.2 0.18 11.7 0.0 1.7 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_29 PF13555.6 BAM40616.1 - 0.07 12.9 0.0 0.23 11.2 0.0 1.8 2 0 0 2 2 2 0 P-loop containing region of AAA domain HAP2-GCS1 PF10699.9 BAM40616.1 - 0.13 12.2 0.2 2 8.5 0.1 2.3 2 0 0 2 2 2 0 Male gamete fusion factor YolD PF08863.10 BAM40616.1 - 0.18 11.8 2.1 0.36 10.9 2.1 1.5 1 0 0 1 1 1 0 YolD-like protein Gtr1_RagA PF04670.12 BAM40616.1 - 0.88 8.9 5.0 0.73 9.1 2.9 2.0 2 1 0 2 2 2 0 Gtr1/RagA G protein conserved region SSB PF00436.25 BAM40617.1 - 3.4e-12 46.3 0.1 5.7e-12 45.6 0.1 1.3 1 0 0 1 1 1 1 Single-strand binding protein family DNA_primase_S PF01896.19 BAM40618.1 - 7e-53 179.3 0.1 9.8e-53 178.8 0.1 1.2 1 0 0 1 1 1 1 DNA primase small subunit CTP_synth_N PF06418.14 BAM40619.1 - 1.7e-108 362.0 0.4 2.4e-108 361.4 0.4 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 BAM40619.1 - 2.5e-41 141.6 0.0 3.8e-41 140.9 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I CbiA PF01656.23 BAM40619.1 - 0.0041 17.2 0.0 0.0062 16.6 0.0 1.7 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain Peptidase_C26 PF07722.13 BAM40619.1 - 0.0052 16.6 0.1 0.023 14.4 0.0 2.1 2 1 0 2 2 2 1 Peptidase C26 PA28_beta PF02252.18 BAM40621.1 - 4.9e-26 91.1 0.9 6.2e-26 90.8 0.2 1.5 2 0 0 2 2 2 1 Proteasome activator pa28 beta subunit PA28_alpha PF02251.18 BAM40621.1 - 0.002 18.2 1.2 0.0034 17.4 0.2 2.0 2 0 0 2 2 2 1 Proteasome activator pa28 alpha subunit SRPRB PF09439.10 BAM40625.1 - 2.6e-08 33.5 5.3 8.9e-07 28.5 0.3 3.2 3 0 0 3 3 3 2 Signal recognition particle receptor beta subunit Ras PF00071.22 BAM40625.1 - 9.1e-08 31.9 0.1 5.3e-07 29.4 0.1 2.2 1 1 0 1 1 1 1 Ras family Arf PF00025.21 BAM40625.1 - 3.5e-05 23.3 0.7 0.005 16.3 0.0 2.3 2 0 0 2 2 2 2 ADP-ribosylation factor family Roc PF08477.13 BAM40625.1 - 0.00025 21.3 0.0 0.0015 18.7 0.0 2.3 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase AAA_14 PF13173.6 BAM40625.1 - 0.00035 20.6 0.0 0.00099 19.1 0.0 1.8 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 BAM40625.1 - 0.005 16.8 0.0 0.01 15.8 0.0 1.5 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea Pox_E8 PF03394.13 BAM40625.1 - 0.015 14.9 0.2 0.031 13.8 0.2 1.5 1 0 0 1 1 1 0 Poxvirus E8 protein AAA_7 PF12775.7 BAM40625.1 - 0.088 12.3 0.2 0.22 11.0 0.2 1.6 1 0 0 1 1 1 0 P-loop containing dynein motor region MMR_HSR1 PF01926.23 BAM40625.1 - 0.26 11.4 3.6 0.13 12.4 0.4 2.2 2 0 0 2 2 2 0 50S ribosome-binding GTPase Atg14 PF10186.9 BAM40626.1 - 0.031 13.3 10.8 0.064 12.3 10.8 1.5 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 Fez1 PF06818.15 BAM40626.1 - 2.1 8.8 27.6 0.043 14.3 16.0 3.3 3 0 0 3 3 3 0 Fez1 ATP11 PF06644.11 BAM40627.1 - 5.8e-21 75.5 0.0 7.3e-21 75.2 0.0 1.1 1 0 0 1 1 1 1 ATP11 protein FAINT PF04385.15 BAM40628.1 - 5.5e-08 32.8 7.5 3.4e-05 23.8 0.9 2.3 2 0 0 2 2 2 2 Domain of unknown function, DUF529 dCache_3 PF14827.6 BAM40628.1 - 2 8.0 5.1 1.1 8.8 0.4 2.8 2 1 1 3 3 3 0 Double sensory domain of two-component sensor kinase RuvX PF03652.15 BAM40631.1 - 0.086 13.2 0.0 0.54 10.6 0.0 2.0 2 0 0 2 2 2 0 Holliday junction resolvase Corona_5a PF06336.11 BAM40632.1 - 0.046 13.7 0.0 0.047 13.7 0.0 1.1 1 0 0 1 1 1 0 Coronavirus 5a protein Antimicrobial10 PF08105.11 BAM40632.1 - 0.21 11.7 1.0 0.21 11.7 0.0 1.7 2 0 0 2 2 2 0 Metchnikowin family CLZ PF16526.5 BAM40633.1 - 0.25 11.7 0.8 0.74 10.2 0.8 1.8 1 0 0 1 1 1 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels NAD_binding_8 PF13450.6 BAM40634.1 - 0.00021 21.4 0.0 0.0014 18.8 0.0 2.3 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 BAM40634.1 - 0.0011 19.5 1.1 2.7 8.6 0.0 4.1 3 1 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 BAM40634.1 - 0.0013 18.1 0.0 3.7 6.7 0.0 3.1 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 BAM40634.1 - 0.092 12.7 0.0 0.27 11.2 0.0 1.8 1 0 0 1 1 1 0 FAD-NAD(P)-binding TRAPPC10 PF12584.8 BAM40635.1 - 1.9e-06 27.7 0.0 4e-06 26.6 0.0 1.5 1 0 0 1 1 1 1 Trafficking protein particle complex subunit 10, TRAPPC10 Ribosomal_S14 PF00253.21 BAM40636.1 - 1.5e-15 56.6 0.0 3.2e-15 55.6 0.0 1.6 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e Prolactin_RP PF15172.6 BAM40636.1 - 0.0032 17.0 0.7 0.008 15.8 0.7 1.7 1 0 0 1 1 1 1 Prolactin-releasing peptide Sugar_tr PF00083.24 BAM40637.1 - 2.7e-54 184.8 36.2 3.5e-54 184.4 36.2 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 BAM40637.1 - 3.2e-10 39.5 36.3 3.2e-10 39.5 36.3 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily Hydrolase_3 PF08282.12 BAM40640.1 - 1.5e-39 136.3 0.0 2.5e-39 135.5 0.0 1.4 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 BAM40640.1 - 2.7e-06 27.1 0.0 0.0017 18.0 0.0 2.2 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase HAD_2 PF13419.6 BAM40640.1 - 0.069 13.2 0.0 0.19 11.8 0.0 1.7 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase DUF5350 PF17299.2 BAM40641.1 - 0.059 13.9 0.5 0.096 13.2 0.5 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5350) PP2C PF00481.21 BAM40642.1 - 2.9e-54 184.4 0.1 1.5e-47 162.4 0.0 3.8 4 0 0 4 4 4 3 Protein phosphatase 2C PIG-F PF06699.11 BAM40644.1 - 0.38 10.9 10.3 3.4 7.8 10.3 2.2 1 1 0 1 1 1 0 GPI biosynthesis protein family Pig-F DUF4122 PF13498.6 BAM40645.1 - 0.03 14.0 2.6 0.059 13.1 2.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4122) Metallophos PF00149.28 BAM40648.1 - 2.7e-36 126.0 0.2 4.7e-36 125.2 0.2 1.4 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 BAM40648.1 - 0.012 15.8 0.0 0.019 15.2 0.0 1.2 1 0 0 1 1 1 0 Calcineurin-like phosphoesterase superfamily domain SAM_4 PF18017.1 BAM40648.1 - 0.11 12.4 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 SAM domain (Sterile alpha motif) Urm1 PF09138.11 BAM40649.1 - 2.6e-26 91.8 0.1 3.6e-26 91.4 0.1 1.2 1 0 0 1 1 1 1 Urm1 (Ubiquitin related modifier) Imp-YgjV PF10688.9 BAM40651.1 - 6.5 6.6 18.4 0.22 11.3 9.1 2.6 2 1 1 3 3 3 0 Bacterial inner membrane protein Guanylate_cyc PF00211.20 BAM40652.1 - 3.2e-82 274.6 5.4 3.7e-44 150.5 1.0 3.1 3 0 0 3 3 3 2 Adenylate and Guanylate cyclase catalytic domain PhoLip_ATPase_C PF16212.5 BAM40652.1 - 7.5e-34 117.6 29.1 7.5e-34 117.6 29.1 4.6 5 0 0 5 5 5 1 Phospholipid-translocating P-type ATPase C-terminal E1-E2_ATPase PF00122.20 BAM40652.1 - 8e-11 41.8 0.0 8e-11 41.8 0.0 3.4 4 1 0 4 4 4 1 E1-E2 ATPase Hydrolase PF00702.26 BAM40652.1 - 4.5e-09 36.9 0.0 8.8e-06 26.2 0.0 3.3 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 BAM40652.1 - 1.3e-05 25.1 0.0 1.3e-05 25.1 0.0 2.5 3 0 0 3 3 3 1 haloacid dehalogenase-like hydrolase Cation_ATPase PF13246.6 BAM40652.1 - 4.4e-05 23.5 0.0 0.00013 22.0 0.0 1.7 1 0 0 1 1 1 1 Cation transport ATPase (P-type) DUF4820 PF16091.5 BAM40652.1 - 1.6 8.0 3.4 3.6 6.9 3.4 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4820) ELMO_CED12 PF04727.13 BAM40653.1 - 1.7e-27 96.7 0.5 3.3e-27 95.7 0.5 1.5 1 0 0 1 1 1 1 ELMO/CED-12 family WD40_like PF17005.5 BAM40654.1 - 0.014 14.8 3.2 0.5 9.6 0.1 2.3 2 1 0 2 2 2 0 WD40-like domain Nup160 PF11715.8 BAM40654.1 - 0.015 14.0 0.0 0.05 12.2 0.0 1.7 2 0 0 2 2 2 0 Nucleoporin Nup120/160 CBF PF03914.17 BAM40657.1 - 7.6e-07 29.3 5.2 8.6e-07 29.2 0.9 2.9 1 1 0 2 2 2 1 CBF/Mak21 family CLASP_N PF12348.8 BAM40657.1 - 0.077 12.5 1.2 0.13 11.8 0.2 1.9 2 0 0 2 2 2 0 CLASP N terminal DUF3295 PF11702.8 BAM40657.1 - 0.97 8.7 7.1 1.4 8.2 7.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3295) MMR_HSR1 PF01926.23 BAM40658.1 - 1.8e-12 47.4 0.3 1.2e-11 44.7 0.1 2.5 2 1 0 2 2 2 1 50S ribosome-binding GTPase NOG1 PF06858.14 BAM40658.1 - 1.7e-08 34.1 0.0 6.9e-08 32.1 0.0 2.0 2 0 0 2 2 2 1 Nucleolar GTP-binding protein 1 (NOG1) GTP_EFTU PF00009.27 BAM40658.1 - 0.00076 19.1 0.6 0.0024 17.5 0.1 2.1 3 0 0 3 3 3 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 BAM40658.1 - 0.0083 16.0 0.0 0.019 14.9 0.0 1.5 1 0 0 1 1 1 1 RsgA GTPase FeoB_N PF02421.18 BAM40658.1 - 0.019 14.5 0.3 0.23 11.0 0.1 2.3 1 1 1 2 2 2 0 Ferrous iron transport protein B GBP PF02263.19 BAM40658.1 - 0.05 12.9 0.1 0.096 11.9 0.1 1.4 1 0 0 1 1 1 0 Guanylate-binding protein, N-terminal domain NOG1_N PF17835.1 BAM40658.1 - 0.63 10.0 2.5 3.4 7.6 2.5 2.1 1 1 0 1 1 1 0 NOG1 N-terminal helical domain FAINT PF04385.15 BAM40660.1 - 0.00011 22.2 5.5 0.00025 21.0 5.5 1.6 1 0 0 1 1 1 1 Domain of unknown function, DUF529 Pox_E10 PF04805.12 BAM40661.1 - 3.7 7.5 7.4 1.4 8.8 2.1 2.8 2 1 0 2 2 2 0 E10-like protein conserved region Tho2 PF11262.8 BAM40664.1 - 1.3e-81 274.1 0.0 4.3e-81 272.4 0.0 1.9 2 1 0 2 2 2 1 Transcription factor/nuclear export subunit protein 2 THOC2_N PF16134.5 BAM40664.1 - 1.1e-22 80.5 1.0 2.2e-14 53.0 0.0 3.2 2 1 0 2 2 2 2 THO complex subunit 2 N-terminus Thoc2 PF11732.8 BAM40664.1 - 3.5e-05 23.8 0.4 3.5e-05 23.8 0.4 2.4 2 0 0 2 2 2 1 Transcription- and export-related complex subunit PP2C PF00481.21 BAM40665.1 - 2.8e-30 105.8 0.5 2.3e-27 96.3 0.0 2.2 2 0 0 2 2 2 2 Protein phosphatase 2C THUMP PF02926.17 BAM40665.1 - 0.0022 18.1 0.1 0.47 10.5 0.1 2.8 2 0 0 2 2 2 2 THUMP domain AAA PF00004.29 BAM40666.1 - 1.3e-42 145.3 0.1 4.7e-42 143.5 0.0 2.0 3 0 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 BAM40666.1 - 2.2e-15 56.2 0.3 4.2e-15 55.3 0.3 1.5 1 0 0 1 1 1 1 AAA+ lid domain AAA_2 PF07724.14 BAM40666.1 - 1.2e-06 28.8 0.0 2.6e-06 27.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 BAM40666.1 - 1.6e-06 28.6 0.0 5.2e-05 23.7 0.0 2.4 1 1 0 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 BAM40666.1 - 1.8e-06 28.0 0.1 1.1e-05 25.4 0.0 2.4 2 1 0 2 2 2 1 AAA domain (dynein-related subfamily) Prot_ATP_ID_OB PF16450.5 BAM40666.1 - 3.2e-05 23.8 0.3 8.6e-05 22.4 0.3 1.8 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain RuvB_N PF05496.12 BAM40666.1 - 4.2e-05 23.3 0.0 0.00011 22.0 0.0 1.7 2 0 0 2 2 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 BAM40666.1 - 7.1e-05 23.1 0.5 0.011 16.0 0.0 2.6 1 1 1 2 2 2 1 AAA domain AAA_33 PF13671.6 BAM40666.1 - 0.00092 19.4 0.0 0.0022 18.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain TIP49 PF06068.13 BAM40666.1 - 0.0016 17.7 0.0 0.0033 16.7 0.0 1.5 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_18 PF13238.6 BAM40666.1 - 0.0017 18.9 0.0 0.0077 16.8 0.0 2.2 1 1 1 2 2 2 1 AAA domain IstB_IS21 PF01695.17 BAM40666.1 - 0.0033 17.2 0.0 0.0063 16.3 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_3 PF07726.11 BAM40666.1 - 0.0089 15.9 0.0 0.021 14.7 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 BAM40666.1 - 0.0095 16.2 0.0 0.019 15.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 BAM40666.1 - 0.01 15.3 0.1 0.023 14.1 0.1 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI TsaE PF02367.17 BAM40666.1 - 0.014 15.4 0.0 0.029 14.4 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RNA_helicase PF00910.22 BAM40666.1 - 0.015 15.7 0.0 0.035 14.5 0.0 1.7 1 0 0 1 1 1 0 RNA helicase ATPase PF06745.13 BAM40666.1 - 0.019 14.3 0.1 0.055 12.8 0.0 1.8 2 0 0 2 2 2 0 KaiC Sigma54_activat PF00158.26 BAM40666.1 - 0.029 14.1 0.0 0.097 12.4 0.0 1.9 2 0 0 2 2 2 0 Sigma-54 interaction domain PhoH PF02562.16 BAM40666.1 - 0.029 13.8 0.0 0.12 11.8 0.0 2.0 2 0 0 2 2 2 0 PhoH-like protein AAA_7 PF12775.7 BAM40666.1 - 0.034 13.6 0.0 0.059 12.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_24 PF13479.6 BAM40666.1 - 0.037 13.7 0.0 0.065 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_14 PF13173.6 BAM40666.1 - 0.041 13.9 0.0 0.086 12.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 BAM40666.1 - 0.047 12.8 0.0 0.075 12.2 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF815) Parvo_NS1 PF01057.17 BAM40666.1 - 0.056 12.5 0.0 0.095 11.8 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_25 PF13481.6 BAM40666.1 - 0.066 12.8 0.0 0.16 11.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 BAM40666.1 - 0.071 12.4 0.1 0.24 10.7 0.0 1.8 2 0 0 2 2 2 0 Zeta toxin AAA_11 PF13086.6 BAM40666.1 - 0.083 12.7 0.0 0.18 11.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 BAM40666.1 - 0.13 12.2 0.0 0.64 9.9 0.0 2.0 2 0 0 2 2 2 0 NACHT domain AAA_30 PF13604.6 BAM40666.1 - 0.15 11.8 0.0 0.3 10.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain FAINT PF04385.15 BAM40667.1 - 0.00073 19.5 2.0 0.00084 19.4 0.5 1.9 2 0 0 2 2 2 1 Domain of unknown function, DUF529 Spc7 PF08317.11 BAM40667.1 - 0.037 12.9 17.7 0.054 12.4 17.7 1.2 1 0 0 1 1 1 0 Spc7 kinetochore protein Exonuc_VII_L PF02601.15 BAM40667.1 - 0.21 11.1 3.7 0.29 10.6 3.7 1.2 1 0 0 1 1 1 0 Exonuclease VII, large subunit MCU PF04678.13 BAM40667.1 - 1.2 9.2 4.3 2 8.5 4.3 1.3 1 0 0 1 1 1 0 Mitochondrial calcium uniporter DUF573 PF04504.14 BAM40670.1 - 0.097 13.3 0.0 0.36 11.5 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function, DUF573 TIR PF01582.20 BAM40671.1 - 0.0033 17.3 0.1 0.011 15.6 0.0 1.9 2 0 0 2 2 2 1 TIR domain Vps54 PF07928.12 BAM40671.1 - 0.0036 17.7 0.6 0.11 12.9 0.6 3.2 1 1 0 1 1 1 1 Vps54-like protein Peptidase_S24 PF00717.23 BAM40673.1 - 1.4e-05 24.9 0.0 2.5e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 Peptidase S24-like CDC24_OB3 PF17244.2 BAM40673.1 - 0.0075 16.0 0.0 0.017 14.9 0.0 1.6 2 0 0 2 2 2 1 Cell division control protein 24, OB domain 3 FKBP_C PF00254.28 BAM40674.1 - 2.5e-29 101.5 0.0 4.1e-29 100.8 0.0 1.4 1 0 0 1 1 1 1 FKBP-type peptidyl-prolyl cis-trans isomerase TPR_2 PF07719.17 BAM40674.1 - 6e-10 38.5 1.9 0.0043 17.1 0.0 3.6 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 BAM40674.1 - 2.7e-09 36.4 2.5 0.0089 15.8 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 BAM40674.1 - 5.5e-06 26.0 0.0 0.13 11.9 0.0 3.6 3 0 0 3 3 3 1 TPR repeat TPR_8 PF13181.6 BAM40674.1 - 8.8e-06 25.5 1.2 0.25 11.6 0.4 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 BAM40674.1 - 4.3e-05 23.7 1.0 0.0008 19.6 0.2 2.8 2 1 0 2 2 2 1 Tetratricopeptide repeat MIT PF04212.18 BAM40674.1 - 0.00016 21.6 1.3 0.00096 19.2 0.0 2.7 3 1 0 3 3 3 1 MIT (microtubule interacting and transport) domain TPR_16 PF13432.6 BAM40674.1 - 0.00017 22.2 0.0 0.065 13.9 0.0 2.9 1 1 2 3 3 3 2 Tetratricopeptide repeat TPR_7 PF13176.6 BAM40674.1 - 0.0016 18.4 1.7 1.4 9.2 0.1 3.8 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_19 PF14559.6 BAM40674.1 - 0.0095 16.4 1.2 0.49 11.0 0.2 2.8 1 1 1 2 2 2 1 Tetratricopeptide repeat TPR_14 PF13428.6 BAM40674.1 - 0.035 14.9 0.1 20 6.3 0.0 3.3 1 1 2 3 3 3 0 Tetratricopeptide repeat ANAPC5 PF12862.7 BAM40674.1 - 0.043 13.9 0.7 1.2 9.2 0.2 2.4 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 5 Coatomer_E PF04733.14 BAM40674.1 - 0.083 12.3 2.0 7.8 5.8 0.4 2.4 2 1 0 2 2 2 0 Coatomer epsilon subunit TPR_9 PF13371.6 BAM40674.1 - 0.15 12.2 0.0 0.25 11.5 0.0 1.3 1 0 0 1 1 1 0 Tetratricopeptide repeat PIG-S PF10510.9 BAM40675.1 - 6.9e-19 68.1 3.5 1.1e-18 67.4 3.5 1.2 1 0 0 1 1 1 1 Phosphatidylinositol-glycan biosynthesis class S protein Actin PF00022.19 BAM40676.1 - 8.3e-144 479.1 0.0 5.1e-143 476.6 0.0 1.8 1 1 0 1 1 1 1 Actin FAD_binding_3 PF01494.19 BAM40679.1 - 1.9e-54 185.2 0.0 1.8e-52 178.7 0.0 2.6 1 1 1 2 2 2 1 FAD binding domain RNase_P_p30 PF01876.16 BAM40682.1 - 9.8e-16 57.9 0.1 1.7e-15 57.1 0.1 1.4 1 1 0 1 1 1 1 RNase P subunit p30 DnaJ PF00226.31 BAM40683.1 - 1e-05 25.5 0.0 2.8e-05 24.2 0.0 1.8 1 0 0 1 1 1 1 DnaJ domain Perilipin PF03036.16 BAM40683.1 - 0.029 13.4 3.2 0.051 12.6 2.7 1.6 1 1 1 2 2 2 0 Perilipin family XPG_I PF00867.18 BAM40684.1 - 1.1e-28 99.4 0.1 3.2e-28 97.9 0.1 1.8 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 BAM40684.1 - 4.8e-26 91.2 0.0 1.2e-25 90.0 0.0 1.7 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 BAM40684.1 - 0.00089 19.8 0.0 0.0027 18.3 0.0 1.9 1 0 0 1 1 1 1 5'-3' exonuclease, C-terminal SAM fold 5_3_exonuc_N PF02739.16 BAM40684.1 - 0.017 15.1 0.0 0.059 13.3 0.0 1.8 1 1 0 1 1 1 0 5'-3' exonuclease, N-terminal resolvase-like domain Sec7 PF01369.20 BAM40684.1 - 0.019 14.7 0.1 0.042 13.5 0.1 1.5 1 0 0 1 1 1 0 Sec7 domain zf-RanBP PF00641.18 BAM40685.1 - 2.9e-19 68.1 18.7 4.7e-12 45.0 2.1 2.1 2 0 0 2 2 2 2 Zn-finger in Ran binding protein and others RecR PF02132.15 BAM40685.1 - 0.012 15.2 12.2 0.054 13.1 1.9 2.4 2 0 0 2 2 2 0 RecR protein zf-BED PF02892.15 BAM40685.1 - 0.11 12.6 7.7 7.2 6.7 0.1 3.6 4 0 0 4 4 4 0 BED zinc finger DZR PF12773.7 BAM40685.1 - 0.15 12.2 8.7 0.35 10.9 8.7 1.7 1 1 0 1 1 1 0 Double zinc ribbon DUF35_N PF12172.8 BAM40685.1 - 0.36 10.8 4.0 3.2 7.7 0.7 2.5 2 1 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) ZZ PF00569.17 BAM40685.1 - 0.71 9.7 9.4 16 5.4 6.2 2.8 2 1 0 2 2 2 0 Zinc finger, ZZ type zf-ribbon_3 PF13248.6 BAM40685.1 - 5.7 6.5 17.7 9.8 5.7 0.2 4.1 3 2 2 5 5 5 0 zinc-ribbon domain C1_2 PF03107.16 BAM40685.1 - 6.3 7.2 11.2 2.2 8.7 2.2 2.7 1 1 1 2 2 2 0 C1 domain PHD PF00628.29 BAM40685.1 - 7.4 6.6 12.8 8.6 6.4 3.7 3.8 3 1 0 3 3 3 0 PHD-finger GBP PF02263.19 BAM40686.1 - 3.5e-09 36.3 0.1 9e-09 35.0 0.1 1.7 1 0 0 1 1 1 1 Guanylate-binding protein, N-terminal domain Mce4_CUP1 PF11887.8 BAM40686.1 - 0.0023 17.4 1.1 0.0052 16.3 1.1 1.5 1 0 0 1 1 1 1 Cholesterol uptake porter CUP1 of Mce4, putative MMR_HSR1 PF01926.23 BAM40686.1 - 0.0089 16.1 0.0 0.034 14.2 0.0 2.0 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA PF00004.29 BAM40687.1 - 1.5e-23 83.7 4.2 1.2e-19 71.1 0.1 2.4 1 1 1 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 BAM40687.1 - 0.00032 20.4 0.3 0.001 18.8 0.0 2.0 2 0 0 2 2 2 1 AAA+ lid domain AAA_22 PF13401.6 BAM40687.1 - 0.0006 20.1 0.0 0.0015 18.8 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_2 PF07724.14 BAM40687.1 - 0.0023 18.1 0.3 0.012 15.7 0.3 2.0 1 1 1 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_18 PF13238.6 BAM40687.1 - 0.0036 17.8 0.1 0.011 16.3 0.0 1.9 2 0 0 2 2 1 1 AAA domain RuvB_N PF05496.12 BAM40687.1 - 0.0049 16.6 0.4 0.089 12.5 0.4 2.2 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 BAM40687.1 - 0.0061 17.0 0.1 0.036 14.4 0.0 2.0 1 1 1 2 2 2 1 AAA ATPase domain AAA_24 PF13479.6 BAM40687.1 - 0.0072 16.1 0.0 0.015 15.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 BAM40687.1 - 0.0078 15.9 0.0 0.018 14.8 0.0 1.5 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_5 PF07728.14 BAM40687.1 - 0.011 15.7 0.3 0.13 12.2 0.1 2.5 1 1 1 2 2 2 0 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 BAM40687.1 - 0.017 14.6 0.0 0.033 13.7 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region ATPase PF06745.13 BAM40687.1 - 0.033 13.6 0.0 0.058 12.7 0.0 1.4 1 0 0 1 1 1 0 KaiC AAA_25 PF13481.6 BAM40687.1 - 0.05 13.2 0.6 0.93 9.0 0.1 2.4 2 0 0 2 2 2 0 AAA domain TniB PF05621.11 BAM40687.1 - 0.055 12.9 0.0 0.18 11.2 0.0 1.8 1 1 0 1 1 1 0 Bacterial TniB protein DUF2075 PF09848.9 BAM40687.1 - 0.06 12.6 0.0 0.1 11.8 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) CT47 PF15623.6 BAM40687.1 - 0.074 12.9 4.8 0.11 12.3 4.8 1.2 1 0 0 1 1 1 0 Cancer/testis gene family 47 Mg_chelatase PF01078.21 BAM40687.1 - 0.1 12.0 0.0 0.21 11.0 0.0 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI Zeta_toxin PF06414.12 BAM40687.1 - 0.12 11.7 0.1 0.3 10.3 0.1 1.6 1 0 0 1 1 1 0 Zeta toxin ABC_tran PF00005.27 BAM40687.1 - 0.12 12.9 0.0 0.35 11.4 0.0 1.8 1 0 0 1 1 1 0 ABC transporter AAA_33 PF13671.6 BAM40687.1 - 0.13 12.4 0.0 0.29 11.3 0.0 1.7 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 BAM40687.1 - 0.14 12.6 0.1 0.42 11.0 0.0 2.0 2 0 0 2 2 1 0 RNA helicase Form_Nir_trans PF01226.17 BAM40688.1 - 6.8e-52 176.2 25.3 8.1e-52 175.9 25.3 1.0 1 0 0 1 1 1 1 Formate/nitrite transporter zf-RING_2 PF13639.6 BAM40689.1 - 9.9e-07 29.0 8.5 3.4e-06 27.3 8.5 2.0 1 0 0 1 1 1 1 Ring finger domain FANCL_C PF11793.8 BAM40689.1 - 0.00027 21.0 6.0 0.00027 21.0 6.0 2.2 2 0 0 2 2 2 1 FANCL C-terminal domain zf-rbx1 PF12678.7 BAM40689.1 - 0.00057 20.1 7.7 0.002 18.4 7.7 2.0 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 BAM40689.1 - 0.0066 16.5 2.3 0.0066 16.5 2.3 2.2 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-C3HC4 PF00097.25 BAM40689.1 - 0.04 13.8 9.9 0.12 12.3 9.9 1.9 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 BAM40689.1 - 0.069 12.8 6.0 0.2 11.3 6.0 1.7 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-C3HC4_2 PF13923.6 BAM40689.1 - 0.076 12.9 9.2 0.21 11.5 9.2 1.8 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) DUF4199 PF13858.6 BAM40689.1 - 0.13 12.7 0.1 0.56 10.6 0.1 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4199) zf-RING_UBOX PF13445.6 BAM40689.1 - 0.26 11.4 6.5 0.6 10.2 6.5 1.7 1 0 0 1 1 1 0 RING-type zinc-finger zf-RING-like PF08746.11 BAM40689.1 - 0.38 11.1 8.3 1.4 9.3 8.3 2.1 1 0 0 1 1 1 0 RING-like domain zf-C3HC4_3 PF13920.6 BAM40689.1 - 1.1 9.1 6.3 2.8 7.9 6.3 1.7 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Zf_RING PF16744.5 BAM40689.1 - 2.2 8.5 4.4 8.7 6.5 4.4 2.0 1 0 0 1 1 1 0 KIAA1045 RING finger zf-Nse PF11789.8 BAM40689.1 - 3.7 7.4 4.9 14 5.6 4.9 2.0 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-RING_4 PF14570.6 BAM40689.1 - 5.2 7.0 8.0 16 5.4 8.0 1.9 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain C1_1 PF00130.22 BAM40689.1 - 6.6 6.7 13.4 0.18 11.7 5.4 2.5 2 1 1 3 3 3 0 Phorbol esters/diacylglycerol binding domain (C1 domain) Bax1-I PF01027.20 BAM40690.1 - 1.8e-29 103.0 17.5 2.2e-29 102.8 17.5 1.0 1 0 0 1 1 1 1 Inhibitor of apoptosis-promoting Bax1 XK-related PF09815.9 BAM40690.1 - 0.081 12.0 11.4 0.035 13.2 8.1 2.0 1 1 1 2 2 2 0 XK-related protein DUF2070 PF09843.9 BAM40690.1 - 0.25 9.6 12.0 0.32 9.2 12.0 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) TssN PF17555.2 BAM40690.1 - 1.2 8.4 13.6 0.34 10.3 7.8 2.1 1 1 1 2 2 2 0 Type VI secretion system, TssN MRP-L28 PF09812.9 BAM40693.1 - 0.0068 16.5 2.3 0.0068 16.5 2.3 1.7 2 0 0 2 2 2 1 Mitochondrial ribosomal protein L28 TruD PF01142.18 BAM40694.1 - 1.4e-59 202.0 5.0 1.5e-56 192.0 2.1 3.9 3 1 0 3 3 3 2 tRNA pseudouridine synthase D (TruD) Ribosomal_L28e PF01778.17 BAM40694.1 - 0.18 12.5 4.1 0.65 10.8 4.1 2.0 1 0 0 1 1 1 0 Ribosomal L28e protein family Synaptobrevin PF00957.21 BAM40695.1 - 4e-08 32.9 1.3 6e-08 32.4 1.3 1.3 1 0 0 1 1 1 1 Synaptobrevin Longin PF13774.6 BAM40695.1 - 3.9e-06 26.8 0.1 6.5e-06 26.1 0.1 1.4 1 0 0 1 1 1 1 Regulated-SNARE-like domain Seryl_tRNA_N PF02403.22 BAM40695.1 - 0.0012 19.1 1.3 0.0019 18.4 1.3 1.4 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain IMS PF00817.20 BAM40696.1 - 3.2e-14 53.2 0.1 6.5e-14 52.2 0.1 1.5 1 0 0 1 1 1 1 impB/mucB/samB family BRCT_2 PF16589.5 BAM40696.1 - 0.00052 20.4 0.0 0.0018 18.7 0.0 2.0 1 1 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain SPX PF03105.19 BAM40696.1 - 9.2 6.1 27.4 0.2 11.6 1.8 2.8 3 0 0 3 3 3 0 SPX domain PGM_PMM_I PF02878.16 BAM40697.1 - 2.2e-09 37.2 0.0 3.3e-06 26.8 0.0 2.5 2 0 0 2 2 2 2 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_IV PF00408.20 BAM40697.1 - 2.4e-08 34.0 0.0 4.9e-08 33.0 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Peptidase_M48_N PF16491.5 BAM40698.1 - 9.7e-17 61.4 10.1 9.7e-17 61.4 10.1 1.7 2 0 0 2 2 2 1 CAAX prenyl protease N-terminal, five membrane helices Peptidase_M48 PF01435.18 BAM40698.1 - 4.3e-09 36.4 0.3 9.2e-09 35.4 0.1 1.7 2 0 0 2 2 2 1 Peptidase family M48 E1-E2_ATPase PF00122.20 BAM40698.1 - 0.016 14.7 1.9 2.6 7.5 0.3 2.4 2 0 0 2 2 2 0 E1-E2 ATPase Proteasome PF00227.26 BAM40699.1 - 2.5e-45 154.3 0.1 3.6e-45 153.8 0.1 1.3 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 BAM40699.1 - 1.5e-12 46.9 0.0 2.7e-12 46.1 0.0 1.4 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature RL11D PF11088.8 BAM40699.1 - 0.0058 16.9 0.1 0.22 11.8 0.1 2.4 2 0 0 2 2 2 1 Glycoprotein encoding membrane proteins RL5A and RL6 Peptidase_M48_N PF16491.5 BAM40700.1 - 5.8e-53 179.5 8.8 5.8e-53 179.5 8.8 2.2 2 1 1 3 3 3 1 CAAX prenyl protease N-terminal, five membrane helices Peptidase_M48 PF01435.18 BAM40700.1 - 4.3e-42 144.1 0.0 6.9e-42 143.5 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 BAM40700.1 - 7.5e-06 25.3 0.1 1.7e-05 24.2 0.1 1.5 1 0 0 1 1 1 1 BlaR1 peptidase M56 Phage_holin_2_4 PF16082.5 BAM40700.1 - 0.63 9.8 3.3 0.4 10.4 0.1 2.1 2 0 0 2 2 2 0 Bacteriophage holin family, superfamily II-like Peptidase_M48 PF01435.18 BAM40701.1 - 7.6e-08 32.4 0.1 1.4e-07 31.4 0.1 1.5 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M48_N PF16491.5 BAM40701.1 - 5.9e-06 26.3 7.5 0.00073 19.5 3.4 2.6 1 1 1 2 2 2 2 CAAX prenyl protease N-terminal, five membrane helices Proteasome PF00227.26 BAM40702.1 - 3e-45 154.0 0.1 3.7e-45 153.8 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 BAM40702.1 - 1.5e-12 46.9 0.0 2.7e-12 46.1 0.0 1.4 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature RL11D PF11088.8 BAM40702.1 - 0.0062 16.8 0.1 0.23 11.8 0.1 2.3 2 0 0 2 2 2 1 Glycoprotein encoding membrane proteins RL5A and RL6 Peptidase_M48_N PF16491.5 BAM40703.1 - 5.8e-53 179.5 8.8 5.8e-53 179.5 8.8 2.2 2 1 1 3 3 3 1 CAAX prenyl protease N-terminal, five membrane helices Peptidase_M48 PF01435.18 BAM40703.1 - 4.3e-42 144.1 0.0 6.9e-42 143.5 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 BAM40703.1 - 7.5e-06 25.3 0.1 1.7e-05 24.2 0.1 1.5 1 0 0 1 1 1 1 BlaR1 peptidase M56 Phage_holin_2_4 PF16082.5 BAM40703.1 - 0.63 9.8 3.3 0.4 10.4 0.1 2.1 2 0 0 2 2 2 0 Bacteriophage holin family, superfamily II-like FAST_1 PF06743.15 BAM40704.1 - 0.018 14.9 0.0 0.018 14.9 0.0 4.0 6 2 1 7 7 7 0 FAST kinase-like protein, subdomain 1 DPPIV_N PF00930.21 BAM40705.1 - 0.17 10.6 0.1 0.21 10.3 0.1 1.1 1 0 0 1 1 1 0 Dipeptidyl peptidase IV (DPP IV) N-terminal region Complex1_LYR_2 PF13233.6 BAM40706.1 - 0.092 13.5 0.3 0.22 12.3 0.3 1.6 1 0 0 1 1 1 0 Complex1_LYR-like Cgr1 PF03879.14 BAM40707.1 - 1.9e-05 25.0 13.0 2.3e-05 24.7 13.0 1.1 1 0 0 1 1 1 1 Cgr1 family DUF2229 PF09989.9 BAM40707.1 - 0.019 14.6 0.4 0.023 14.4 0.4 1.1 1 0 0 1 1 1 0 CoA enzyme activase uncharacterised domain (DUF2229) DUF3395 PF11875.8 BAM40707.1 - 1.3 8.8 7.4 1.7 8.5 7.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3395) RRM_1 PF00076.22 BAM40708.1 - 2.3e-36 123.4 12.7 6.8e-18 64.3 0.2 6.1 6 0 0 6 6 6 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 BAM40708.1 - 0.0046 17.1 0.1 5.4 7.2 0.0 3.6 3 0 0 3 3 3 2 RNA recognition motif DUF1681 PF07933.14 BAM40708.1 - 0.02 14.6 0.2 0.079 12.7 0.2 2.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1681) RRM_occluded PF16842.5 BAM40708.1 - 0.021 14.7 0.1 5.9 6.8 0.0 4.3 5 0 0 5 5 5 0 Occluded RNA-recognition motif Phage_TAC_13 PF16459.5 BAM40708.1 - 0.071 13.6 6.2 5.2 7.6 0.0 4.0 5 0 0 5 5 5 0 Phage tail assembly chaperone, TAC Limkain-b1 PF11608.8 BAM40708.1 - 0.82 9.8 4.8 5.9 7.0 0.0 4.1 4 0 0 4 4 4 0 Limkain b1 Img2 PF05046.14 BAM40708.1 - 0.85 10.0 7.5 1.9 8.8 0.1 4.2 4 1 0 4 4 4 0 Mitochondrial large subunit ribosomal protein (Img2) EF-hand_4 PF12763.7 BAM40709.1 - 1.3e-21 76.5 0.8 1.5e-09 37.7 0.0 3.1 3 0 0 3 3 3 2 Cytoskeletal-regulatory complex EF hand EF-hand_7 PF13499.6 BAM40709.1 - 7.3e-08 32.7 2.4 0.0086 16.5 0.0 3.0 3 0 0 3 3 3 2 EF-hand domain pair EF-hand_1 PF00036.32 BAM40709.1 - 5.6e-07 28.7 0.1 0.0062 16.0 0.0 3.2 3 0 0 3 3 3 2 EF hand EF-hand_8 PF13833.6 BAM40709.1 - 1.2e-06 28.2 1.7 0.0015 18.3 0.1 2.9 2 1 1 3 3 3 2 EF-hand domain pair EF-hand_6 PF13405.6 BAM40709.1 - 0.00016 21.4 0.1 1.7 8.8 0.0 3.7 3 0 0 3 3 3 2 EF-hand domain EF-hand_5 PF13202.6 BAM40709.1 - 0.036 13.6 0.1 0.55 9.8 0.0 2.9 2 0 0 2 2 2 0 EF hand Occludin_ELL PF07303.13 BAM40709.1 - 0.077 13.7 11.1 0.088 13.5 1.2 2.5 2 0 0 2 2 2 0 Occludin homology domain La PF05383.17 BAM40709.1 - 0.091 12.8 0.0 0.24 11.5 0.0 1.7 1 0 0 1 1 1 0 La domain TraG_N PF07916.11 BAM40709.1 - 0.28 10.0 0.3 0.4 9.5 0.3 1.2 1 0 0 1 1 1 0 TraG-like protein, N-terminal region LMBR1 PF04791.16 BAM40709.1 - 3 6.6 15.8 4.6 6.0 15.8 1.3 1 0 0 1 1 1 0 LMBR1-like membrane protein Syntaxin-6_N PF09177.11 BAM40709.1 - 4.8 7.8 17.1 0.15 12.6 5.3 2.6 2 0 0 2 2 2 0 Syntaxin 6, N-terminal KIP1 PF07765.12 BAM40709.1 - 7.8 6.7 10.8 6 7.1 0.5 3.9 2 1 1 4 4 4 0 KIP1-like protein SIS PF01380.22 BAM40710.1 - 2.7e-28 98.4 3.4 2.2e-16 59.9 0.2 2.7 3 0 0 3 3 3 2 SIS domain GATase_6 PF13522.6 BAM40710.1 - 2.2e-14 53.8 0.1 5.1e-09 36.4 0.0 2.5 2 0 0 2 2 2 2 Glutamine amidotransferase domain GATase_7 PF13537.6 BAM40710.1 - 2.6e-05 24.1 0.0 0.043 13.7 0.0 2.6 2 0 0 2 2 2 2 Glutamine amidotransferase domain GATase_4 PF13230.6 BAM40710.1 - 0.0045 15.9 0.0 0.0083 15.1 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferases class-II Cyc-maltodext_C PF10438.9 BAM40710.1 - 0.38 10.9 1.7 6.2 7.0 0.0 3.1 3 0 0 3 3 3 0 Cyclo-malto-dextrinase C-terminal domain ATP12 PF07542.11 BAM40711.1 - 2e-09 37.6 0.0 2.9e-09 37.1 0.0 1.2 1 0 0 1 1 1 1 ATP12 chaperone protein Cpn60_TCP1 PF00118.24 BAM40712.1 - 9.3e-162 539.1 0.2 1.1e-161 538.9 0.2 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family DUF3638 PF12340.8 BAM40713.1 - 1.4e-23 83.5 0.4 6.3e-21 74.8 0.1 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF3638) DUF3645 PF12359.8 BAM40713.1 - 1.2e-14 53.3 0.1 3.2e-14 52.0 0.1 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF3645) Vps62 PF06101.11 BAM40713.1 - 0.00018 19.9 0.0 0.00031 19.2 0.0 1.2 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 62 EF-hand_6 PF13405.6 BAM40713.1 - 0.00096 18.9 0.0 0.0045 16.8 0.0 2.2 1 0 0 1 1 1 1 EF-hand domain EF-hand_7 PF13499.6 BAM40713.1 - 0.0013 19.1 0.0 0.0056 17.1 0.0 2.1 1 0 0 1 1 1 1 EF-hand domain pair EF-hand_1 PF00036.32 BAM40713.1 - 0.0023 17.4 0.3 0.0088 15.5 0.3 2.1 1 0 0 1 1 1 1 EF hand DUF777 PF05606.11 BAM40713.1 - 0.098 12.4 0.3 0.27 11.0 0.3 1.7 1 0 0 1 1 1 0 Borrelia burgdorferi protein of unknown function (DUF777) EF-hand_5 PF13202.6 BAM40713.1 - 0.12 11.9 0.0 0.31 10.6 0.0 1.8 1 0 0 1 1 1 0 EF hand FAINT PF04385.15 BAM40714.1 - 6.5e-05 22.9 15.4 0.21 11.7 1.4 4.1 3 2 0 3 3 3 3 Domain of unknown function, DUF529 ABC_tran PF00005.27 BAM40715.1 - 1.2e-34 119.8 0.0 1.6e-18 67.5 0.0 2.5 2 0 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 BAM40715.1 - 4.9e-10 39.5 18.5 4.9e-10 39.5 18.5 3.4 4 0 0 4 4 2 1 ABC transporter transmembrane region Zeta_toxin PF06414.12 BAM40715.1 - 5.1e-06 25.9 0.2 0.1 11.8 0.0 2.3 2 0 0 2 2 2 2 Zeta toxin RsgA_GTPase PF03193.16 BAM40715.1 - 5.5e-06 26.4 0.9 0.032 14.1 0.2 2.4 2 0 0 2 2 2 2 RsgA GTPase AAA_29 PF13555.6 BAM40715.1 - 2.2e-05 24.1 1.3 0.082 12.7 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain MeaB PF03308.16 BAM40715.1 - 2.3e-05 23.5 0.2 0.083 11.9 0.2 2.4 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 BAM40715.1 - 0.00012 22.5 0.1 0.13 12.6 0.0 2.3 2 0 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 BAM40715.1 - 0.00029 21.4 2.7 0.05 14.1 0.2 2.8 2 1 0 2 2 2 1 AAA domain T2SSE PF00437.20 BAM40715.1 - 0.00035 19.7 0.6 0.51 9.3 0.1 2.3 2 0 0 2 2 2 2 Type II/IV secretion system protein FtsK_SpoIIIE PF01580.18 BAM40715.1 - 0.0012 18.3 0.4 0.35 10.2 0.0 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_30 PF13604.6 BAM40715.1 - 0.0019 17.9 0.6 0.067 12.9 0.1 2.2 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 BAM40715.1 - 0.002 18.2 0.7 0.34 11.0 0.1 2.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_21 PF13304.6 BAM40715.1 - 0.0043 16.9 6.3 0.59 9.9 0.4 4.3 4 1 1 5 5 4 1 AAA domain, putative AbiEii toxin, Type IV TA system ATP_bind_1 PF03029.17 BAM40715.1 - 0.0047 16.8 0.8 1.3 8.8 0.1 2.5 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_22 PF13401.6 BAM40715.1 - 0.0053 17.0 0.4 1.1 9.6 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_25 PF13481.6 BAM40715.1 - 0.011 15.3 0.1 6.6 6.3 0.0 2.8 2 1 0 2 2 2 0 AAA domain cobW PF02492.19 BAM40715.1 - 0.014 15.0 2.7 1.1 8.8 0.3 2.4 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_10 PF12846.7 BAM40715.1 - 0.018 13.9 0.3 1.8 7.4 0.1 2.3 2 0 0 2 2 2 0 AAA-like domain SMC_N PF02463.19 BAM40715.1 - 0.022 14.2 4.6 0.049 13.1 0.4 2.9 3 0 0 3 3 3 0 RecF/RecN/SMC N terminal domain DUF815 PF05673.13 BAM40715.1 - 0.024 13.8 0.3 0.56 9.3 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF815) TrwB_AAD_bind PF10412.9 BAM40715.1 - 0.031 13.2 1.6 0.94 8.3 0.0 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain AAA_18 PF13238.6 BAM40715.1 - 0.036 14.6 0.3 7.4 7.1 0.1 2.6 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 BAM40715.1 - 0.047 13.7 0.3 13 5.8 0.0 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 BAM40715.1 - 0.055 13.6 0.2 4 7.6 0.1 2.7 2 0 0 2 2 2 0 AAA domain VraX PF17412.2 BAM40715.1 - 0.075 12.7 1.6 1.7 8.3 0.0 3.5 3 0 0 3 3 3 0 Family of unknown function AAA_24 PF13479.6 BAM40715.1 - 0.1 12.3 1.3 7.9 6.2 0.1 2.7 3 0 0 3 3 3 0 AAA domain NACHT PF05729.12 BAM40715.1 - 0.12 12.2 1.5 15 5.5 0.1 2.7 2 0 0 2 2 2 0 NACHT domain Dynamin_N PF00350.23 BAM40715.1 - 0.16 12.0 4.8 0.41 10.7 1.4 2.7 2 0 0 2 2 2 0 Dynamin family AAA_7 PF12775.7 BAM40715.1 - 0.22 11.0 3.9 1.6 8.2 0.1 2.7 3 0 0 3 3 2 0 P-loop containing dynein motor region MobB PF03205.14 BAM40715.1 - 0.27 11.1 4.5 1.4 8.8 0.3 2.6 3 0 0 3 3 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_19 PF13245.6 BAM40715.1 - 0.33 11.3 2.1 15 5.9 0.1 2.5 2 0 0 2 2 2 0 AAA domain RNA_helicase PF00910.22 BAM40715.1 - 0.34 11.3 2.1 15 6.0 0.0 3.6 4 0 0 4 4 2 0 RNA helicase NB-ARC PF00931.22 BAM40715.1 - 0.37 9.9 2.8 0.41 9.8 0.2 2.1 2 0 0 2 2 2 0 NB-ARC domain DUF87 PF01935.17 BAM40715.1 - 0.54 10.3 9.9 0.66 10.0 0.5 2.9 3 0 0 3 3 3 0 Helicase HerA, central domain SRP54 PF00448.22 BAM40715.1 - 0.7 9.5 2.5 0.75 9.4 0.2 2.0 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain NTPase_1 PF03266.15 BAM40715.1 - 1.1 9.2 3.4 11 5.9 0.2 2.5 2 0 0 2 2 2 0 NTPase Aldo_ket_red PF00248.21 BAM40716.1 - 6.9e-63 212.6 0.2 2.2e-62 210.9 0.0 1.7 2 0 0 2 2 2 1 Aldo/keto reductase family Cas6_N PF17952.1 BAM40716.1 - 0.045 14.0 0.2 0.1 12.9 0.2 1.5 1 0 0 1 1 1 0 Cas6 N-terminal domain NIF PF03031.18 BAM40718.1 - 2e-22 79.7 0.5 3.8e-22 78.7 0.5 1.4 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase RcsC PF09456.10 BAM40718.1 - 0.19 11.8 0.0 0.62 10.1 0.0 1.9 1 1 0 1 1 1 0 RcsC Alpha-Beta-Loop (ABL) Metallophos PF00149.28 BAM40719.1 - 9e-30 104.7 0.2 1.5e-29 104.0 0.2 1.3 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase PPP5 PF08321.12 BAM40719.1 - 1.3e-16 60.6 1.0 7.7e-16 58.2 0.2 2.4 2 1 0 2 2 2 1 PPP5 TPR repeat region TPR_1 PF00515.28 BAM40719.1 - 7.2e-14 50.9 0.3 0.0001 22.0 0.1 3.7 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 BAM40719.1 - 3.9e-11 42.2 0.1 0.0014 18.6 0.1 3.6 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_11 PF13414.6 BAM40719.1 - 5.3e-07 29.2 0.0 0.029 14.1 0.0 2.6 2 0 0 2 2 2 2 TPR repeat TPR_8 PF13181.6 BAM40719.1 - 0.00048 20.1 0.3 0.53 10.6 0.0 3.5 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 BAM40719.1 - 0.007 16.6 0.3 0.78 10.1 0.0 2.9 2 1 0 2 2 2 1 Tetratricopeptide repeat TPR_10 PF13374.6 BAM40719.1 - 0.024 14.5 0.0 2.2 8.3 0.0 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat DehI PF10778.9 BAM40719.1 - 0.17 12.0 0.0 0.29 11.3 0.0 1.3 1 0 0 1 1 1 0 Halocarboxylic acid dehydrogenase DehI Phosducin PF02114.16 BAM40721.1 - 1.1e-08 34.4 0.0 1.2e-08 34.2 0.0 1.2 1 0 0 1 1 1 1 Phosducin Thioredoxin PF00085.20 BAM40721.1 - 0.00034 20.6 0.0 0.0005 20.0 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin DUF1463 PF07316.11 BAM40721.1 - 0.028 14.3 0.2 0.14 12.0 0.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1463) Sld3_N PF18523.1 BAM40722.1 - 0.14 12.3 0.1 0.21 11.7 0.1 1.2 1 0 0 1 1 1 0 Sld3 N-terminal domain Ribosomal_S8e PF01201.22 BAM40724.1 - 9.7e-55 184.5 0.0 1.2e-54 184.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S8e CTNNBL PF08216.11 BAM40725.1 - 0.0031 17.7 0.2 0.012 15.7 0.2 2.0 1 0 0 1 1 1 1 Catenin-beta-like, Arm-motif containing nuclear FAINT PF04385.15 BAM40726.1 - 1.2e-30 105.4 33.6 3.2e-07 30.3 1.0 7.5 7 0 0 7 7 7 7 Domain of unknown function, DUF529 CAP_N PF01213.19 BAM40726.1 - 2.3 7.6 6.5 4.4 6.7 6.5 1.4 1 0 0 1 1 1 0 Adenylate cyclase associated (CAP) N terminal Bud13 PF09736.9 BAM40728.1 - 2.4e-38 131.8 11.4 4.5e-38 130.9 11.4 1.4 1 0 0 1 1 1 1 Pre-mRNA-splicing factor of RES complex ABC_tran PF00005.27 BAM40730.1 - 2.8e-34 118.6 0.0 7.9e-18 65.3 0.0 2.9 2 1 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 BAM40730.1 - 1.2e-10 41.5 24.4 1.2e-10 41.5 24.4 3.5 3 0 0 3 3 1 1 ABC transporter transmembrane region MeaB PF03308.16 BAM40730.1 - 4.4e-06 25.9 0.1 0.0093 15.0 0.1 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB Zeta_toxin PF06414.12 BAM40730.1 - 1e-05 24.9 0.2 0.13 11.5 0.0 2.3 2 0 0 2 2 2 2 Zeta toxin RsgA_GTPase PF03193.16 BAM40730.1 - 1.2e-05 25.3 0.5 0.089 12.7 0.1 2.5 2 0 0 2 2 2 2 RsgA GTPase AAA_16 PF13191.6 BAM40730.1 - 6.7e-05 23.3 0.1 0.065 13.6 0.0 2.3 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 BAM40730.1 - 0.00037 20.2 4.9 0.083 12.6 0.0 2.8 3 0 0 3 3 2 2 P-loop containing region of AAA domain T2SSE PF00437.20 BAM40730.1 - 0.00038 19.6 0.2 0.47 9.5 0.1 2.3 2 0 0 2 2 2 2 Type II/IV secretion system protein AAA_23 PF13476.6 BAM40730.1 - 0.0004 20.9 3.5 0.091 13.3 0.1 3.4 3 0 0 3 3 3 1 AAA domain MMR_HSR1 PF01926.23 BAM40730.1 - 0.0022 18.1 0.8 0.34 11.0 0.1 2.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_30 PF13604.6 BAM40730.1 - 0.0025 17.6 0.5 0.095 12.4 0.0 2.3 2 0 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.18 BAM40730.1 - 0.0028 17.0 0.3 0.35 10.2 0.0 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_10 PF12846.7 BAM40730.1 - 0.0066 15.4 0.8 1.4 7.7 0.1 2.3 2 0 0 2 2 2 2 AAA-like domain ATP_bind_1 PF03029.17 BAM40730.1 - 0.0067 16.2 0.6 2.2 8.0 0.1 2.6 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_21 PF13304.6 BAM40730.1 - 0.0085 15.9 2.7 0.51 10.1 0.1 2.8 2 0 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 BAM40730.1 - 0.011 15.1 2.7 0.051 13.0 0.4 2.5 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 BAM40730.1 - 0.012 15.9 0.5 2.6 8.3 0.0 2.9 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 BAM40730.1 - 0.015 15.8 0.3 7.5 7.1 0.1 3.0 2 0 0 2 2 2 0 AAA domain TrwB_AAD_bind PF10412.9 BAM40730.1 - 0.034 13.1 1.0 1.2 7.9 0.0 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain DUF87 PF01935.17 BAM40730.1 - 0.042 13.9 6.2 0.75 9.8 0.4 3.0 2 0 0 2 2 2 0 Helicase HerA, central domain TsaE PF02367.17 BAM40730.1 - 0.07 13.1 0.3 14 5.7 0.0 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE MobB PF03205.14 BAM40730.1 - 0.074 12.9 1.7 1.4 8.8 0.3 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_24 PF13479.6 BAM40730.1 - 0.081 12.6 0.3 8.2 6.1 0.1 2.4 2 0 0 2 2 2 0 AAA domain DUF815 PF05673.13 BAM40730.1 - 0.083 12.0 0.3 0.53 9.4 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_33 PF13671.6 BAM40730.1 - 0.1 12.8 0.8 5.1 7.2 0.2 2.6 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 BAM40730.1 - 0.13 11.8 0.2 10 5.6 0.0 2.3 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 BAM40730.1 - 0.15 11.9 2.0 15 5.4 0.1 2.8 3 0 0 3 3 2 0 NACHT domain Dynamin_N PF00350.23 BAM40730.1 - 0.31 11.1 6.0 0.4 10.7 1.2 2.9 3 0 0 3 3 2 0 Dynamin family NB-ARC PF00931.22 BAM40730.1 - 0.38 9.9 3.3 0.34 10.0 0.2 2.2 2 0 0 2 2 2 0 NB-ARC domain SRP54 PF00448.22 BAM40730.1 - 0.42 10.2 2.0 0.7 9.5 0.1 2.0 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain cobW PF02492.19 BAM40730.1 - 0.52 9.9 8.0 1.1 8.8 0.3 2.8 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain FAINT PF04385.15 BAM40731.1 - 4.3e-09 36.3 37.9 0.00028 20.9 8.8 6.6 4 0 0 4 4 4 4 Domain of unknown function, DUF529 FAINT PF04385.15 BAM40733.1 - 0.039 14.0 1.5 0.09 12.8 1.5 1.6 1 0 0 1 1 1 0 Domain of unknown function, DUF529 ATG16 PF08614.11 BAM40733.1 - 0.061 13.5 20.6 0.2 11.8 17.1 2.9 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) HAUS-augmin3 PF14932.6 BAM40733.1 - 0.16 11.5 16.9 0.017 14.8 9.8 2.1 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 CENP-F_leu_zip PF10473.9 BAM40733.1 - 0.64 10.0 30.9 1.1 9.3 17.2 3.0 2 1 1 3 3 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 TFR_dimer PF04253.15 BAM40733.1 - 1.3 9.2 5.8 3.6 7.7 0.3 2.9 2 1 0 2 2 2 0 Transferrin receptor-like dimerisation domain DUF948 PF06103.11 BAM40733.1 - 1.3 9.3 8.4 1.3 9.3 1.0 2.7 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Fez1 PF06818.15 BAM40733.1 - 3.4 8.1 25.8 0.027 15.0 12.1 2.6 1 1 1 2 2 2 0 Fez1 APG6_N PF17675.1 BAM40733.1 - 5.2 7.6 34.5 1.2 9.7 22.1 3.1 2 1 0 2 2 2 0 Apg6 coiled-coil region DUF1664 PF07889.12 BAM40733.1 - 5.3 7.1 12.0 7.3 6.7 5.8 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) LLC1 PF14945.6 BAM40735.1 - 0.14 12.8 0.1 0.41 11.2 0.0 1.7 2 0 0 2 2 2 0 Normal lung function maintenance, Low in Lung Cancer 1 protein FAINT PF04385.15 BAM40746.1 - 1.4e-05 25.0 2.3 3.5e-05 23.8 2.3 1.6 1 0 0 1 1 1 1 Domain of unknown function, DUF529 Fez1 PF06818.15 BAM40746.1 - 0.0074 16.8 13.0 0.0074 16.8 13.0 2.3 1 1 1 2 2 2 1 Fez1 ATG16 PF08614.11 BAM40746.1 - 0.029 14.6 23.9 0.15 12.3 19.8 2.8 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) DUF1366 PF07104.11 BAM40746.1 - 0.039 13.6 17.2 0.088 12.5 1.3 3.1 1 1 1 3 3 3 0 Protein of unknown function (DUF1366) PhosphMutase PF10143.9 BAM40746.1 - 0.052 13.4 6.0 0.42 10.5 0.8 2.8 2 0 0 2 2 2 0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase CENP-F_leu_zip PF10473.9 BAM40746.1 - 0.095 12.7 27.7 0.064 13.3 20.8 2.4 2 0 0 2 2 2 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 FAM76 PF16046.5 BAM40746.1 - 0.11 11.9 8.0 0.19 11.0 8.0 1.5 1 0 0 1 1 1 0 FAM76 protein HAUS-augmin3 PF14932.6 BAM40746.1 - 0.24 10.9 17.6 0.097 12.2 12.9 2.1 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 zf-C4H2 PF10146.9 BAM40746.1 - 0.29 11.4 7.5 0.075 13.3 3.3 2.1 2 0 0 2 2 2 0 Zinc finger-containing protein APC_N_CC PF16689.5 BAM40746.1 - 0.98 9.5 10.9 1.6 8.9 8.6 2.5 1 1 1 2 2 2 0 Coiled-coil N-terminus of APC, dimerisation domain DUF3552 PF12072.8 BAM40746.1 - 1.9 7.8 26.8 0.63 9.4 19.4 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) Syntaxin_2 PF14523.6 BAM40746.1 - 4.9 7.6 11.1 1.3 9.5 6.7 2.1 2 0 0 2 2 2 0 Syntaxin-like protein APG6_N PF17675.1 BAM40746.1 - 9.3 6.8 28.1 0.57 10.7 18.7 2.5 2 0 0 2 2 2 0 Apg6 coiled-coil region ABC_tran PF00005.27 BAM40749.1 - 1.9e-32 112.6 0.0 2.5e-17 63.6 0.0 2.5 2 0 0 2 2 2 2 ABC transporter RsgA_GTPase PF03193.16 BAM40749.1 - 5.3e-05 23.2 0.8 0.23 11.3 0.1 2.4 2 0 0 2 2 2 2 RsgA GTPase Zeta_toxin PF06414.12 BAM40749.1 - 6e-05 22.4 0.1 0.099 11.9 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin AAA_29 PF13555.6 BAM40749.1 - 0.00028 20.5 1.2 0.21 11.3 0.1 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain MeaB PF03308.16 BAM40749.1 - 0.0003 19.8 0.5 0.074 12.0 0.2 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 BAM40749.1 - 0.0013 19.1 0.0 0.58 10.5 0.0 2.4 2 0 0 2 2 2 1 AAA ATPase domain T2SSE PF00437.20 BAM40749.1 - 0.0083 15.2 0.1 2.6 7.0 0.0 2.2 2 0 0 2 2 2 2 Type II/IV secretion system protein AAA_30 PF13604.6 BAM40749.1 - 0.023 14.4 0.3 0.72 9.5 0.0 2.2 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 BAM40749.1 - 0.024 14.0 0.2 0.53 9.6 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_22 PF13401.6 BAM40749.1 - 0.033 14.5 0.3 9.4 6.5 0.0 2.8 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 BAM40749.1 - 0.034 13.9 2.0 1.5 8.5 0.2 2.7 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein SMC_N PF02463.19 BAM40749.1 - 0.049 13.0 2.0 0.08 12.4 0.5 2.0 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 BAM40749.1 - 0.063 13.4 1.0 3.1 7.9 0.2 2.7 2 0 0 2 2 2 0 50S ribosome-binding GTPase TrwB_AAD_bind PF10412.9 BAM40749.1 - 0.11 11.4 1.1 2.1 7.2 0.0 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain DUF815 PF05673.13 BAM40749.1 - 0.12 11.5 0.3 2.3 7.3 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_23 PF13476.6 BAM40749.1 - 0.13 12.8 5.2 4.3 7.8 0.1 2.6 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 BAM40749.1 - 0.16 12.0 0.3 10 6.1 0.1 2.4 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NB-ARC PF00931.22 BAM40749.1 - 0.17 11.1 2.0 0.17 11.0 0.1 1.8 2 0 0 2 2 2 0 NB-ARC domain AAA_25 PF13481.6 BAM40749.1 - 0.18 11.4 0.0 7 6.2 0.0 2.4 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 BAM40749.1 - 0.29 11.0 0.9 9.3 6.2 0.1 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_33 PF13671.6 BAM40749.1 - 0.51 10.5 1.5 24 5.1 0.2 2.4 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 BAM40749.1 - 2 8.0 6.7 6.6 6.3 0.1 2.6 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain FAINT PF04385.15 BAM40750.1 - 1.6e-28 98.6 63.6 3.3e-05 23.9 0.1 9.4 9 0 0 9 9 9 8 Domain of unknown function, DUF529 FAINT PF04385.15 BAM40751.1 - 9.3e-14 51.3 48.6 0.019 15.0 0.1 8.7 8 0 0 8 8 8 8 Domain of unknown function, DUF529 FAINT PF04385.15 BAM40752.1 - 2.8e-18 65.7 25.9 0.00031 20.7 2.6 5.9 5 0 0 5 5 5 5 Domain of unknown function, DUF529 T2SSC PF11356.8 BAM40752.1 - 0.24 11.3 1.2 2.3 8.1 0.0 2.3 2 0 0 2 2 2 0 Type II secretion system protein C FAINT PF04385.15 BAM40753.1 - 4.8e-11 42.6 51.2 0.00042 20.3 5.4 8.5 8 1 1 9 9 9 6 Domain of unknown function, DUF529 FAINT PF04385.15 BAM40754.1 - 3.7e-13 49.3 43.0 0.0092 16.0 1.7 7.7 7 1 0 7 7 7 6 Domain of unknown function, DUF529 CAF1 PF04857.20 BAM40754.1 - 0.00099 18.4 6.7 0.019 14.1 0.2 2.3 2 0 0 2 2 2 2 CAF1 family ribonuclease Pilin_GH PF16734.5 BAM40754.1 - 0.065 13.6 1.3 0.81 10.0 0.0 3.2 3 0 0 3 3 3 0 Type IV pilin-like G and H, putative FAINT PF04385.15 BAM40755.1 - 3.6e-29 100.6 52.7 3.5e-06 27.0 1.5 10.6 10 0 0 10 10 10 10 Domain of unknown function, DUF529 Chorion_2 PF03964.15 BAM40755.1 - 0.49 11.3 7.7 1.7 9.5 7.7 2.0 1 0 0 1 1 1 0 Chorion family 2 FAINT PF04385.15 BAM40758.1 - 3.5e-10 39.8 51.6 5.4e-05 23.2 0.3 10.3 11 0 0 11 11 11 6 Domain of unknown function, DUF529 Ribosomal_S7 PF00177.21 BAM40759.1 - 6.6e-39 132.9 1.6 8.3e-39 132.6 1.6 1.1 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e Arf PF00025.21 BAM40760.1 - 2.5e-11 43.3 0.0 2.9e-11 43.1 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 BAM40760.1 - 6e-07 29.7 0.0 8.9e-07 29.2 0.0 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 BAM40760.1 - 6.2e-05 22.5 0.0 9.1e-05 22.0 0.0 1.2 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 BAM40760.1 - 0.0033 17.0 0.0 0.0042 16.7 0.0 1.1 1 0 0 1 1 1 1 Ras family Gtr1_RagA PF04670.12 BAM40760.1 - 0.0045 16.4 0.0 0.0055 16.1 0.0 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region TFIIF_beta PF02270.15 BAM40761.1 - 0.044 13.9 0.1 0.09 12.9 0.1 1.5 1 0 0 1 1 1 0 TFIIF, beta subunit HTH domain RPA_C PF08784.11 BAM40761.1 - 0.048 14.3 0.1 0.075 13.7 0.1 1.4 1 0 0 1 1 1 0 Replication protein A C terminal TFIIF_beta_N PF17683.1 BAM40761.1 - 0.054 14.2 1.0 0.13 13.0 0.0 2.0 2 1 0 2 2 2 0 TFIIF, beta subunit N-terminus MBF1 PF08523.10 BAM40762.1 - 2.2e-19 69.6 0.6 2.2e-19 69.6 0.6 1.9 2 1 0 2 2 2 1 Multiprotein bridging factor 1 HTH_3 PF01381.22 BAM40762.1 - 5.4e-12 45.6 0.9 6.7e-12 45.3 0.1 1.5 2 0 0 2 2 2 1 Helix-turn-helix HTH_31 PF13560.6 BAM40762.1 - 1.4e-08 34.9 0.0 5.3e-08 33.1 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_19 PF12844.7 BAM40762.1 - 4.4e-06 26.6 0.2 1.3e-05 25.2 0.1 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain polyprenyl_synt PF00348.17 BAM40763.1 - 2.9e-72 242.8 0.2 2.9e-72 242.8 0.2 1.4 2 0 0 2 2 2 1 Polyprenyl synthetase CoA_binding_3 PF13727.6 BAM40765.1 - 0.049 13.7 3.2 0.078 13.0 3.2 1.3 1 0 0 1 1 1 0 CoA-binding domain DUF4383 PF14325.6 BAM40765.1 - 0.68 10.2 6.0 0.55 10.5 2.5 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4383) AP2 PF00847.20 BAM40766.1 - 3.2e-11 43.3 4.6 5.5e-11 42.5 4.6 1.4 1 0 0 1 1 1 1 AP2 domain vATP-synt_E PF01991.18 BAM40767.1 - 2.9e-34 118.2 14.6 3.5e-34 118.0 14.6 1.1 1 0 0 1 1 1 1 ATP synthase (E/31 kDa) subunit Peptidase_M2 PF01401.18 BAM40767.1 - 0.05 12.2 5.2 0.053 12.1 5.2 1.1 1 0 0 1 1 1 0 Angiotensin-converting enzyme BLUF PF04940.12 BAM40767.1 - 0.06 13.5 1.9 0.11 12.7 0.5 2.1 2 1 0 2 2 2 0 Sensors of blue-light using FAD DUF4665 PF15679.5 BAM40767.1 - 0.63 10.7 9.7 0.76 10.4 5.5 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF4665) SecY PF00344.20 BAM40768.1 - 4.7e-70 236.3 7.5 4.7e-70 236.3 7.5 1.3 2 0 0 2 2 2 1 SecY translocase Plug_translocon PF10559.9 BAM40768.1 - 4.8e-17 61.5 1.8 7.8e-17 60.8 0.1 2.3 2 0 0 2 2 2 1 Plug domain of Sec61p Mog1 PF04603.12 BAM40769.1 - 1.7e-21 77.0 0.0 2e-21 76.8 0.0 1.1 1 0 0 1 1 1 1 Ran-interacting Mog1 protein Spindle_Spc25 PF08234.12 BAM40770.1 - 6.5e-17 61.5 2.1 2.9e-16 59.4 0.1 2.6 2 0 0 2 2 2 1 Chromosome segregation protein Spc25 UTP15_C PF09384.10 BAM40770.1 - 0.031 14.0 0.2 0.046 13.4 0.2 1.4 1 0 0 1 1 1 0 UTP15 C terminal Baculo_PEP_C PF04513.12 BAM40770.1 - 0.18 11.8 9.0 0.55 10.3 9.0 1.7 1 1 0 1 1 1 0 Baculovirus polyhedron envelope protein, PEP, C terminus ETRAMP PF09716.10 BAM40773.1 - 0.046 13.8 0.1 0.17 12.0 0.2 1.9 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) Sigma_reg_C PF13791.6 BAM40773.1 - 0.11 12.8 2.3 0.24 11.6 2.3 1.5 1 0 0 1 1 1 0 Sigma factor regulator C-terminal GCH_III PF05165.12 BAM40773.1 - 0.14 11.4 0.0 0.21 10.8 0.0 1.2 1 0 0 1 1 1 0 GTP cyclohydrolase III SieB PF14163.6 BAM40773.1 - 0.17 11.4 0.4 0.32 10.5 0.4 1.3 1 0 0 1 1 1 0 Super-infection exclusion protein B Glyco_hyd_65N_2 PF14498.6 BAM40773.1 - 0.36 10.6 4.4 0.41 10.5 0.1 2.4 3 0 0 3 3 3 0 Glycosyl hydrolase family 65, N-terminal domain FAINT PF04385.15 BAM40774.1 - 2.4e-31 107.6 61.9 3.6e-06 26.9 1.0 12.3 11 1 1 12 12 12 9 Domain of unknown function, DUF529 ParA PF10609.9 BAM40775.1 - 1.7e-64 217.6 0.0 1.3e-63 214.7 0.0 1.9 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 BAM40775.1 - 1.4e-09 38.0 0.0 2.5e-09 37.3 0.0 1.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 BAM40775.1 - 1e-08 35.3 1.3 6e-08 32.8 1.3 2.0 1 1 0 1 1 1 1 AAA domain MipZ PF09140.11 BAM40775.1 - 3.8e-06 26.4 0.0 1.1e-05 24.9 0.0 1.7 1 1 1 2 2 2 1 ATPase MipZ ArsA_ATPase PF02374.15 BAM40775.1 - 6.2e-06 25.6 0.2 2e-05 24.0 0.2 1.8 1 1 0 1 1 1 1 Anion-transporting ATPase CBP_BcsQ PF06564.12 BAM40775.1 - 7.2e-05 22.4 0.0 0.0014 18.2 0.0 2.1 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ CLP1_P PF16575.5 BAM40775.1 - 0.046 13.5 0.0 0.094 12.5 0.0 1.5 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop VirC1 PF07015.11 BAM40775.1 - 0.14 11.4 1.9 0.14 11.4 0.3 1.7 2 0 0 2 2 2 0 VirC1 protein MeaB PF03308.16 BAM40775.1 - 0.17 10.8 0.1 0.27 10.2 0.1 1.2 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Peptidase_C13 PF01650.18 BAM40776.1 - 3.3e-12 46.5 4.4 5.4e-12 45.8 4.4 1.3 1 0 0 1 1 1 1 Peptidase C13 family CBFD_NFYB_HMF PF00808.23 BAM40778.1 - 4.3e-21 75.0 1.2 7e-21 74.3 1.2 1.4 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 BAM40778.1 - 5.8e-05 23.5 0.2 5.8e-05 23.5 0.2 2.8 2 1 0 2 2 2 1 Core histone H2A/H2B/H3/H4 TFIID_20kDa PF03847.13 BAM40778.1 - 0.035 14.6 0.1 0.076 13.5 0.1 1.5 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A CENP-T_C PF15511.6 BAM40778.1 - 0.037 14.2 0.0 0.072 13.2 0.0 1.4 1 0 0 1 1 1 0 Centromere kinetochore component CENP-T histone fold Pex24p PF06398.11 BAM40779.1 - 0.068 12.1 0.1 0.068 12.1 0.1 1.1 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Pkinase PF00069.25 BAM40781.1 - 1e-50 172.6 0.0 3.5e-35 121.6 0.0 2.1 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 BAM40781.1 - 1e-23 83.9 0.0 2.2e-19 69.8 0.0 2.2 2 0 0 2 2 2 2 Protein tyrosine kinase Kinase-like PF14531.6 BAM40781.1 - 0.0036 16.6 0.0 0.38 10.0 0.0 2.2 2 0 0 2 2 2 2 Kinase-like RIO1 PF01163.22 BAM40781.1 - 0.0074 15.9 0.1 0.054 13.1 0.0 2.2 3 0 0 3 3 3 1 RIO1 family Pkinase_fungal PF17667.1 BAM40781.1 - 0.0093 14.8 0.0 0.015 14.1 0.0 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 BAM40781.1 - 0.021 14.7 0.1 0.099 12.5 0.1 1.9 2 0 0 2 2 2 0 Phosphotransferase enzyme family Ribosomal_L41 PF05162.13 BAM40782.1 - 4.1e-08 33.1 26.9 5.9e-08 32.6 26.9 1.3 1 0 0 1 1 1 1 Ribosomal protein L41 ThiF PF00899.21 BAM40783.1 - 1.7e-07 30.9 0.0 2.3e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 ThiF family DUF4131 PF13567.6 BAM40786.1 - 0.53 9.9 3.2 9 5.9 0.1 3.4 4 0 0 4 4 4 0 Domain of unknown function (DUF4131) COX17 PF05051.13 BAM40787.1 - 2.2e-16 59.9 6.6 5.1e-16 58.8 6.6 1.6 1 0 0 1 1 1 1 Cytochrome C oxidase copper chaperone (COX17) YL1 PF05764.13 BAM40787.1 - 0.00087 19.5 7.7 0.0012 19.1 7.7 1.2 1 0 0 1 1 1 1 YL1 nuclear protein DUF948 PF06103.11 BAM40788.1 - 0.053 13.8 1.0 0.19 12.0 0.4 2.3 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) Pex24p PF06398.11 BAM40788.1 - 0.11 11.5 5.9 0.029 13.4 1.1 2.1 2 0 0 2 2 2 0 Integral peroxisomal membrane peroxin Polyketide_cyc PF03364.20 BAM40791.1 - 2.6e-14 53.5 0.0 3.1e-14 53.3 0.0 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc2 PF10604.9 BAM40791.1 - 0.0032 17.8 0.0 0.0044 17.3 0.0 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport DEAD PF00270.29 BAM40792.1 - 3.7e-48 163.6 0.0 2.4e-46 157.7 0.0 2.2 2 0 0 2 2 2 2 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM40792.1 - 7.7e-29 100.3 0.1 5.1e-28 97.6 0.1 2.2 1 1 1 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM40792.1 - 1.2e-07 31.9 0.0 2.5e-07 30.8 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit ERCC3_RAD25_C PF16203.5 BAM40792.1 - 0.0031 16.8 0.1 0.0053 16.0 0.1 1.3 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase Spt5-NGN PF03439.13 BAM40793.1 - 1e-21 76.6 0.0 3.2e-21 75.0 0.0 1.9 2 0 0 2 2 2 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 BAM40793.1 - 3.6e-14 52.1 21.5 0.00096 19.0 0.0 7.3 8 0 0 8 8 8 4 KOW motif DUF150_C PF17384.2 BAM40793.1 - 0.057 13.5 2.7 1.4 9.1 0.5 3.2 3 0 0 3 3 3 0 RimP C-terminal SH3 domain ProQ_C PF17516.2 BAM40793.1 - 0.15 11.5 5.5 3.6 7.1 0.7 3.8 4 0 0 4 4 4 0 ProQ C-terminal domain YajC PF02699.15 BAM40793.1 - 1 9.3 7.3 46 4.0 0.2 4.8 4 1 1 5 5 5 0 Preprotein translocase subunit NIF PF03031.18 BAM40795.1 - 7.6e-23 81.0 2.0 9.7e-23 80.7 0.3 1.9 2 0 0 2 2 2 1 NLI interacting factor-like phosphatase Biotin_lipoyl_2 PF13533.6 BAM40795.1 - 0.19 11.6 0.1 0.62 9.9 0.0 1.8 2 0 0 2 2 2 0 Biotin-lipoyl like AP2 PF00847.20 BAM40796.1 - 0.0048 17.1 1.0 0.012 15.8 1.0 1.7 1 0 0 1 1 1 1 AP2 domain CLZ PF16526.5 BAM40796.1 - 0.1 12.9 0.1 0.1 12.9 0.1 2.9 3 0 0 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels SAP18 PF06487.12 BAM40797.1 - 9.1e-09 35.6 0.2 9.1e-09 35.6 0.2 3.4 2 1 0 2 2 2 1 Sin3 associated polypeptide p18 (SAP18) Sld5 PF05916.11 BAM40798.1 - 7.5e-07 29.6 0.2 0.00015 22.1 0.1 3.0 2 1 0 2 2 2 1 GINS complex protein Ribosomal_S8e PF01201.22 BAM40799.1 - 2.1e-49 167.2 4.5 3.2e-49 166.6 4.5 1.2 1 0 0 1 1 1 1 Ribosomal protein S8e DUF1754 PF08555.10 BAM40800.1 - 2.6e-11 44.2 2.5 2.6e-11 44.2 2.5 4.3 3 2 0 3 3 3 1 Eukaryotic family of unknown function (DUF1754) DUF1604 PF07713.13 BAM40800.1 - 7.9e-09 35.2 0.1 3.8e-08 33.0 0.1 2.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1604) DUF1542 PF07564.11 BAM40800.1 - 0.5 10.5 11.0 0.14 12.3 2.4 2.7 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1542) DUF5446 PF17522.2 BAM40800.1 - 5.7 7.2 9.6 1.8 8.7 0.6 3.0 3 0 0 3 3 3 0 Family of unknown function (DUF5446) Pannexin_like PF12534.8 BAM40801.1 - 0.024 13.8 0.2 0.039 13.1 0.2 1.2 1 0 0 1 1 1 0 Pannexin-like TM region of LRRC8 GTP_EFTU PF00009.27 BAM40802.1 - 2.2e-60 203.5 0.0 3.9e-60 202.7 0.0 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 BAM40802.1 - 2.5e-30 104.7 0.0 9.4e-30 102.9 0.0 2.1 1 0 0 1 1 1 1 Elongation factor G, domain IV EFG_II PF14492.6 BAM40802.1 - 2.2e-25 88.5 0.5 6e-24 83.9 0.5 2.5 1 1 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.24 BAM40802.1 - 3.4e-25 87.9 0.1 8.1e-25 86.7 0.1 1.7 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 BAM40802.1 - 3.5e-08 33.7 0.3 9.8e-08 32.3 0.3 1.8 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 BAM40802.1 - 0.0068 16.5 0.1 0.017 15.2 0.1 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase bPH_3 PF14470.6 BAM40803.1 - 0.021 15.2 1.1 0.1 13.0 0.3 2.7 2 0 0 2 2 2 0 Bacterial PH domain PEGA PF08308.11 BAM40803.1 - 0.12 12.3 0.2 0.62 10.0 0.0 2.3 2 0 0 2 2 2 0 PEGA domain ATP13 PF12921.7 BAM40805.1 - 0.056 13.3 0.1 0.22 11.4 0.1 2.0 1 0 0 1 1 1 0 Mitochondrial ATPase expression Tn7_Tnp_TnsA_C PF08721.11 BAM40805.1 - 0.57 10.9 5.4 11 6.8 0.1 4.4 4 2 1 5 5 5 0 TnsA endonuclease C terminal MACPF PF01823.19 BAM40806.1 - 5.4e-23 82.2 0.7 2.1e-21 77.0 0.7 2.1 1 1 0 1 1 1 1 MAC/Perforin domain Pantoate_ligase PF02569.15 BAM40806.1 - 0.1 11.8 0.0 1.6 7.9 0.0 2.1 2 0 0 2 2 2 0 Pantoate-beta-alanine ligase Proteasome PF00227.26 BAM40807.1 - 2.5e-59 200.0 0.0 3.6e-59 199.4 0.0 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 BAM40807.1 - 7.3e-10 38.3 0.8 1.6e-09 37.3 0.0 2.0 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature CPW_WPC PF09717.10 BAM40810.1 - 8.4e-36 122.8 58.8 3.3e-13 50.4 2.4 6.8 5 2 0 5 5 5 4 Plasmodium falciparum domain of unknown function (CPW_WPC) Gag_MA PF01140.19 BAM40810.1 - 0.096 12.4 1.4 0.36 10.6 0.1 2.4 2 0 0 2 2 2 0 Matrix protein (MA), p15 Peptidase_S24 PF00717.23 BAM40811.1 - 6.6e-12 45.2 0.0 1e-11 44.6 0.0 1.4 1 0 0 1 1 1 1 Peptidase S24-like PNP_phzG_C PF10590.9 BAM40811.1 - 0.14 12.2 0.1 0.28 11.3 0.1 1.4 1 0 0 1 1 1 0 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region UbiA PF01040.18 BAM40813.1 - 4.7e-45 153.9 7.6 6.2e-45 153.5 7.6 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family MACPF PF01823.19 BAM40814.1 - 6.7e-103 343.2 50.8 2.3e-39 135.7 9.7 3.7 3 1 0 3 3 3 3 MAC/Perforin domain Tubulin_C PF03953.17 BAM40814.1 - 0.058 13.6 0.1 0.23 11.6 0.1 2.0 1 0 0 1 1 1 0 Tubulin C-terminal domain Fer4_12 PF13353.6 BAM40814.1 - 3.7 7.8 12.2 3.7 7.8 0.3 5.0 4 1 1 5 5 5 0 4Fe-4S single cluster domain Macoilin PF09726.9 BAM40815.1 - 0.23 10.0 8.6 0.22 10.0 8.6 1.1 1 0 0 1 1 1 0 Macoilin family GTP1_OBG PF01018.22 BAM40816.1 - 1.1e-28 99.8 2.3 1.4e-28 99.4 2.3 1.2 1 0 0 1 1 1 1 GTP1/OBG MMR_HSR1 PF01926.23 BAM40816.1 - 5.6e-20 71.5 0.0 8.9e-20 70.9 0.0 1.3 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 BAM40816.1 - 3e-13 49.6 0.1 6.1e-13 48.6 0.1 1.5 1 1 0 1 1 1 1 Ferrous iron transport protein B Arf PF00025.21 BAM40816.1 - 7.7e-05 22.2 0.0 0.00017 21.1 0.0 1.5 2 0 0 2 2 2 1 ADP-ribosylation factor family SRPRB PF09439.10 BAM40816.1 - 0.0022 17.5 0.0 0.0032 16.9 0.0 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 BAM40816.1 - 0.084 12.5 0.3 0.41 10.2 0.3 1.9 1 1 0 1 1 1 0 Ras family Peptidase_M17_N PF02789.17 BAM40817.1 - 0.0081 16.0 0.3 0.92 9.4 0.0 2.5 2 0 0 2 2 2 2 Cytosol aminopeptidase family, N-terminal domain Ax_dynein_light PF10211.9 BAM40817.1 - 0.29 11.1 8.6 24 4.8 0.0 2.6 2 0 0 2 2 2 0 Axonemal dynein light chain LMBR1 PF04791.16 BAM40817.1 - 0.32 9.8 1.0 0.65 8.8 1.0 1.5 1 0 0 1 1 1 0 LMBR1-like membrane protein dCMP_cyt_deam_1 PF00383.23 BAM40818.1 - 2.2e-14 53.1 1.0 3.3e-14 52.6 1.0 1.2 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 BAM40818.1 - 1.1e-11 44.6 1.6 9.5e-11 41.6 1.6 1.9 1 1 0 1 1 1 1 MafB19-like deaminase Bd3614-deam PF14439.6 BAM40818.1 - 0.019 15.0 0.2 0.031 14.3 0.2 1.4 1 0 0 1 1 1 0 Bd3614-like deaminase SPC25 PF06703.11 BAM40819.1 - 4.7e-05 23.2 5.7 6.8e-05 22.7 5.7 1.2 1 0 0 1 1 1 1 Microsomal signal peptidase 25 kDa subunit (SPC25) MH1 PF03165.16 BAM40819.1 - 0.11 12.7 1.4 5.9 7.2 0.0 3.0 3 1 0 3 3 3 0 MH1 domain Arm-DNA-bind_4 PF14657.6 BAM40819.1 - 0.14 12.0 2.9 0.34 10.7 2.9 1.6 1 0 0 1 1 1 0 Arm DNA-binding domain Snf7 PF03357.21 BAM40820.1 - 8.5e-14 51.5 7.1 1.2e-13 51.1 7.1 1.2 1 0 0 1 1 1 1 Snf7 Spatacsin_C PF14649.6 BAM40820.1 - 0.0045 16.2 3.6 0.0049 16.0 3.0 1.4 1 1 0 1 1 1 1 Spatacsin C-terminus SPAM PF02090.15 BAM40820.1 - 0.84 9.4 8.0 0.19 11.5 3.7 1.9 1 1 1 2 2 2 0 Salmonella surface presentation of antigen gene type M protein DEAD PF00270.29 BAM40821.1 - 3.8e-33 114.7 0.1 3.1e-32 111.7 0.1 2.6 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM40821.1 - 3.6e-15 56.3 0.1 3.6e-15 56.3 0.1 4.0 5 1 1 6 6 6 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM40821.1 - 3.6e-05 23.8 0.9 0.00029 20.9 0.0 3.0 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 BAM40821.1 - 0.0013 19.1 0.0 0.03 14.7 0.0 2.5 2 0 0 2 2 2 1 AAA domain TrwB_AAD_bind PF10412.9 BAM40821.1 - 0.017 14.0 0.1 0.11 11.4 0.0 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain PuR_N PF09182.10 BAM40821.1 - 0.021 14.7 0.1 0.089 12.7 0.1 2.1 1 0 0 1 1 1 0 Bacterial purine repressor, N-terminal AAA_22 PF13401.6 BAM40821.1 - 0.028 14.7 0.0 0.28 11.5 0.0 2.8 1 1 0 1 1 1 0 AAA domain AAA_30 PF13604.6 BAM40821.1 - 0.029 14.1 0.0 0.065 12.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain POP1 PF06978.11 BAM40822.1 - 2.1e-34 119.3 23.8 6.3e-19 68.8 3.1 2.6 2 1 1 3 3 3 2 Ribonucleases P/MRP protein subunit POP1 POPLD PF08170.12 BAM40822.1 - 5.7e-16 58.6 2.7 1.1e-15 57.7 0.0 2.7 3 0 0 3 3 3 1 POPLD (NUC188) domain Hist_deacetyl PF00850.19 BAM40823.1 - 8.7e-99 330.9 0.1 1.3e-98 330.2 0.1 1.3 1 0 0 1 1 1 1 Histone deacetylase domain IPK PF03770.16 BAM40823.1 - 1.1e-34 120.0 0.3 2.6e-34 118.8 0.0 1.7 2 0 0 2 2 2 1 Inositol polyphosphate kinase eIF-3_zeta PF05091.12 BAM40824.1 - 7.7e-158 526.7 7.5 1.1e-157 526.2 7.5 1.2 1 0 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) Patatin PF01734.22 BAM40824.1 - 2.5e-25 89.9 0.0 5.3e-25 88.8 0.0 1.6 1 0 0 1 1 1 1 Patatin-like phospholipase Tombus_movement PF05318.12 BAM40825.1 - 0.55 11.1 4.7 20 6.1 0.3 2.6 2 0 0 2 2 2 0 Tombusvirus movement protein Proteasom_PSMB PF10508.9 BAM40826.1 - 2.8e-07 29.4 0.5 0.003 16.2 0.1 2.2 2 0 0 2 2 2 2 Proteasome non-ATPase 26S subunit FAM183 PF14886.6 BAM40827.1 - 0.035 14.8 1.6 0.035 14.8 1.6 2.2 2 1 0 2 2 2 0 FAM183A and FAM183B related ISP1_C PF18161.1 BAM40830.1 - 0.092 12.8 1.1 0.53 10.3 1.1 2.1 1 1 0 1 1 1 0 ISP1 C-terminal Mersacidin PF16934.5 BAM40831.1 - 0.019 14.7 0.0 0.028 14.2 0.0 1.2 1 0 0 1 1 1 0 Two-component Enterococcus faecalis cytolysin (EFC) CBS PF00571.28 BAM40833.1 - 1.6e-09 38.1 0.1 0.0003 21.2 0.1 4.3 4 0 0 4 4 4 3 CBS domain Ras PF00071.22 BAM40834.1 - 3.9e-62 208.6 3.5 5.6e-62 208.1 3.5 1.2 1 0 0 1 1 1 1 Ras family Roc PF08477.13 BAM40834.1 - 5.1e-35 120.3 0.9 9.5e-35 119.4 0.9 1.4 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 BAM40834.1 - 3.1e-17 62.6 1.1 3.7e-17 62.3 1.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family Gtr1_RagA PF04670.12 BAM40834.1 - 3.8e-06 26.4 0.9 4.9e-06 26.1 0.9 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 BAM40834.1 - 2.1e-05 24.6 0.3 3.2e-05 24.0 0.3 1.5 1 1 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 BAM40834.1 - 4.9e-05 22.8 2.2 9.3e-05 21.9 0.2 2.0 1 1 1 2 2 2 1 Signal recognition particle receptor beta subunit GTP_EFTU PF00009.27 BAM40834.1 - 5.1e-05 22.9 4.5 0.00068 19.2 4.5 2.2 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 BAM40834.1 - 0.0005 20.0 3.7 0.22 11.4 0.1 2.3 1 1 0 2 2 2 2 RsgA GTPase AAA_22 PF13401.6 BAM40834.1 - 0.0031 17.8 0.1 0.008 16.5 0.1 1.8 1 1 1 2 2 2 1 AAA domain cobW PF02492.19 BAM40834.1 - 0.007 16.0 1.4 0.66 9.6 0.1 2.2 1 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain Septin PF00735.18 BAM40834.1 - 0.007 15.7 0.8 0.042 13.1 0.0 2.2 2 1 0 2 2 2 1 Septin CPT PF07931.12 BAM40834.1 - 0.0083 16.0 0.0 0.011 15.6 0.0 1.2 1 0 0 1 1 1 1 Chloramphenicol phosphotransferase-like protein AAA_16 PF13191.6 BAM40834.1 - 0.0089 16.4 0.0 0.014 15.7 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain ATP_bind_1 PF03029.17 BAM40834.1 - 0.009 15.8 0.7 0.059 13.2 0.1 2.0 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein AAA_5 PF07728.14 BAM40834.1 - 0.03 14.3 0.1 0.078 13.0 0.1 2.0 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 BAM40834.1 - 0.032 14.0 0.7 0.067 12.9 0.7 1.9 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 BAM40834.1 - 0.041 13.4 1.0 0.094 12.2 0.1 2.0 2 1 0 2 2 2 0 P-loop containing dynein motor region MCM PF00493.23 BAM40834.1 - 0.045 12.8 0.6 0.12 11.4 0.0 1.8 2 0 0 2 2 2 0 MCM P-loop domain PduV-EutP PF10662.9 BAM40834.1 - 0.068 12.9 0.9 0.39 10.5 0.9 2.2 1 1 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation BrnT_toxin PF04365.13 BAM40834.1 - 0.077 13.3 0.4 2.2 8.7 0.1 2.4 2 1 0 2 2 2 0 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system AAA_29 PF13555.6 BAM40834.1 - 0.12 12.2 0.1 0.34 10.7 0.1 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 BAM40834.1 - 0.15 12.6 1.9 0.31 11.5 1.7 1.8 1 1 0 1 1 1 0 ABC transporter NACHT PF05729.12 BAM40834.1 - 0.16 11.9 0.0 0.28 11.1 0.0 1.3 1 0 0 1 1 1 0 NACHT domain Ribosomal_S9 PF00380.19 BAM40835.1 - 2e-23 83.2 0.0 3.1e-23 82.6 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Peptidase_M60 PF13402.6 BAM40835.1 - 0.045 13.3 0.4 0.063 12.8 0.4 1.2 1 0 0 1 1 1 0 Peptidase M60, enhancin and enhancin-like Peptidase_C93 PF06035.11 BAM40835.1 - 0.11 12.3 0.4 0.17 11.7 0.4 1.2 1 0 0 1 1 1 0 Bacterial transglutaminase-like cysteine proteinase BTLCP ASL_C PF08328.11 BAM40836.1 - 8e-31 106.5 0.0 1.5e-30 105.7 0.0 1.5 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminal Lyase_1 PF00206.20 BAM40836.1 - 8.8e-23 81.2 0.0 3.3e-13 49.7 0.0 2.3 2 0 0 2 2 2 2 Lyase KKLCAg1 PF15204.6 BAM40836.1 - 0.039 14.1 0.1 3.9 7.6 0.0 2.5 2 0 0 2 2 2 0 Kita-kyushu lung cancer antigen 1 CPBP PF02517.16 BAM40838.1 - 6.8e-12 45.6 4.4 6.8e-12 45.6 4.4 2.3 2 1 0 2 2 2 1 CPBP intramembrane metalloprotease TFIIA_gamma_C PF02751.14 BAM40838.1 - 0.058 13.6 0.1 0.14 12.3 0.1 1.6 1 0 0 1 1 1 0 Transcription initiation factor IIA, gamma subunit Cas_VVA1548 PF09652.10 BAM40840.1 - 0.041 14.1 0.0 0.087 13.1 0.0 1.5 1 0 0 1 1 1 0 Putative CRISPR-associated protein (Cas_VVA1548) MADF_DNA_bdg PF10545.9 BAM40840.1 - 0.088 13.1 0.0 0.31 11.4 0.0 1.9 2 0 0 2 2 2 0 Alcohol dehydrogenase transcription factor Myb/SANT-like IL3 PF02059.15 BAM40840.1 - 0.24 11.5 2.3 3.8 7.6 0.6 3.1 2 1 1 3 3 3 0 Interleukin-3 DUF4793 PF16041.5 BAM40840.1 - 0.74 10.0 5.3 0.39 10.9 2.8 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4793) CDKN3 PF05706.12 BAM40842.1 - 0.0023 17.6 0.4 0.0038 16.9 0.4 1.3 1 0 0 1 1 1 1 Cyclin-dependent kinase inhibitor 3 (CDKN3) NUDIX PF00293.28 BAM40844.1 - 2.6e-07 30.8 0.0 3.6e-07 30.3 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain Zip PF02535.22 BAM40845.1 - 9.8e-34 117.0 8.1 1.3e-33 116.6 8.1 1.1 1 0 0 1 1 1 1 ZIP Zinc transporter DUF1077 PF06417.12 BAM40845.1 - 0.57 10.2 4.5 0.48 10.5 1.3 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1077) DUF4539 PF15072.6 BAM40846.1 - 2.4e-17 62.7 0.4 4.1e-17 62.0 0.4 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4539) tRNA_anti-codon PF01336.25 BAM40846.1 - 0.13 12.2 0.0 0.23 11.5 0.0 1.3 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain SWIB PF02201.18 BAM40848.1 - 5.9e-06 26.1 0.5 1.7e-05 24.6 0.1 2.0 2 0 0 2 2 2 1 SWIB/MDM2 domain Mqo PF06039.15 BAM40851.1 - 2.4e-17 62.7 0.0 1e-16 60.6 0.0 2.0 1 1 0 1 1 1 1 Malate:quinone oxidoreductase (Mqo) DAO PF01266.24 BAM40851.1 - 2.1e-13 50.6 0.0 3.4e-13 49.9 0.0 1.3 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 BAM40851.1 - 2.9e-06 26.8 0.0 2.3e-05 23.8 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 BAM40851.1 - 0.02 14.1 0.0 0.43 9.8 0.0 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 BAM40851.1 - 0.028 14.7 0.0 0.058 13.6 0.0 1.5 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain K_oxygenase PF13434.6 BAM40851.1 - 0.05 12.7 0.0 0.19 10.8 0.0 1.8 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) NAD_binding_9 PF13454.6 BAM40851.1 - 0.087 12.8 0.0 3.2 7.7 0.0 2.2 2 0 0 2 2 2 0 FAD-NAD(P)-binding Clat_adaptor_s PF01217.20 BAM40852.1 - 7.4e-06 25.9 0.3 9.1e-06 25.7 0.3 1.1 1 0 0 1 1 1 1 Clathrin adaptor complex small chain Ribosomal_L15e PF00827.17 BAM40853.1 - 4.4e-91 303.8 8.8 5.1e-91 303.6 8.8 1.0 1 0 0 1 1 1 1 Ribosomal L15 Hepatitis_core PF00906.20 BAM40853.1 - 2.8 7.5 8.4 1.3 8.6 0.1 2.1 2 0 0 2 2 2 0 Hepatitis core antigen Rhomboid PF01694.22 BAM40855.1 - 5.9e-17 62.1 10.5 4e-11 43.1 0.7 2.3 2 1 0 2 2 2 2 Rhomboid family zf-HC5HC2H_2 PF13832.6 BAM40856.1 - 2.1e-15 56.8 25.1 4.9e-10 39.5 6.1 5.6 6 1 0 6 6 6 2 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 BAM40856.1 - 1.5e-12 47.6 20.7 2e-08 34.4 6.0 6.2 5 1 0 5 5 5 3 PHD-like zinc-binding domain PHD PF00628.29 BAM40856.1 - 9.9e-05 22.2 9.9 9.9e-05 22.2 9.9 8.1 8 2 2 10 10 10 2 PHD-finger EST1 PF10374.9 BAM40856.1 - 0.12 13.0 0.1 0.12 13.0 0.1 4.7 5 1 0 5 5 5 0 Telomerase activating protein Est1 Sec63 PF02889.16 BAM40858.1 - 3.7e-127 422.8 6.0 1.2e-78 263.8 0.1 2.9 3 0 0 3 3 3 2 Sec63 Brl domain DEAD PF00270.29 BAM40858.1 - 3e-38 131.3 4.0 9.7e-26 90.6 0.1 3.5 3 0 0 3 3 3 2 DEAD/DEAH box helicase Helicase_PWI PF18149.1 BAM40858.1 - 3.8e-34 117.2 6.4 3.8e-34 117.2 6.4 2.8 3 0 0 3 3 3 1 N-terminal helicase PWI domain ResIII PF04851.15 BAM40858.1 - 3.8e-11 43.3 9.7 6.9e-10 39.2 0.0 3.8 4 0 0 4 4 4 2 Type III restriction enzyme, res subunit Helicase_C PF00271.31 BAM40858.1 - 3.1e-08 33.9 4.3 2.1e-05 24.8 0.0 5.1 4 2 0 4 4 4 1 Helicase conserved C-terminal domain T2SSE PF00437.20 BAM40858.1 - 0.026 13.6 0.0 0.14 11.2 0.0 2.4 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_22 PF13401.6 BAM40858.1 - 0.042 14.1 1.1 3.3 8.0 1.1 3.6 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.6 BAM40858.1 - 0.3 11.4 2.4 8.3 6.7 0.6 3.4 2 1 0 2 2 2 0 AAA domain AAA_11 PF13086.6 BAM40858.1 - 4 7.1 14.4 0.25 11.1 0.1 4.0 4 1 0 4 4 4 0 AAA domain RNA_pol_Rpb2_6 PF00562.28 BAM40860.1 - 2.5e-122 408.7 0.1 4.2e-122 408.0 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 BAM40860.1 - 8.3e-44 149.5 0.4 1.3e-43 148.9 0.4 1.3 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_7 PF04560.20 BAM40860.1 - 4.7e-32 110.2 0.1 1.3e-31 108.8 0.1 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_4 PF04566.13 BAM40860.1 - 2.2e-21 75.9 0.5 5.1e-21 74.7 0.5 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_2 PF04561.14 BAM40860.1 - 3e-20 72.7 1.2 8.3e-20 71.2 1.2 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_3 PF04565.16 BAM40860.1 - 5.3e-19 68.2 0.0 1.1e-18 67.1 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_5 PF04567.17 BAM40860.1 - 1.4e-08 35.1 1.0 8.2e-08 32.7 0.4 2.6 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 5 Ribosom_S12_S23 PF00164.25 BAM40861.1 - 2.6e-49 165.6 0.4 3.4e-49 165.2 0.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Ribosomal_L30 PF00327.20 BAM40862.1 - 2.2e-17 62.7 2.0 6.6e-17 61.1 2.0 1.9 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_L30_N PF08079.12 BAM40862.1 - 1.5e-14 54.0 15.9 2.5e-14 53.3 15.9 1.4 1 0 0 1 1 1 1 Ribosomal L30 N-terminal domain EB1 PF03271.17 BAM40863.1 - 2.1e-09 37.5 0.2 1.1e-08 35.2 0.4 2.1 2 0 0 2 2 2 1 EB1-like C-terminal motif CH PF00307.31 BAM40863.1 - 7.4e-09 35.8 0.4 7.4e-09 35.8 0.4 2.3 2 1 0 2 2 2 1 Calponin homology (CH) domain DnaB PF00772.21 BAM40863.1 - 0.013 15.6 0.1 0.097 12.8 0.0 2.4 2 1 0 2 2 2 0 DnaB-like helicase N terminal domain CH_2 PF06294.11 BAM40863.1 - 0.083 13.0 0.4 0.083 13.0 0.4 2.2 2 0 0 2 2 2 0 CH-like domain in sperm protein Fungal_TACC PF12709.7 BAM40863.1 - 0.36 11.3 7.0 0.31 11.5 3.8 2.5 1 1 1 2 2 2 0 Fungal Transforming acidic coiled-coil (TACC) proteins DUF148 PF02520.17 BAM40863.1 - 0.74 10.0 9.9 3.3 7.9 5.7 2.6 2 1 0 2 2 2 0 Domain of unknown function DUF148 DUF848 PF05852.11 BAM40863.1 - 3.6 7.7 6.8 7 6.8 2.8 2.3 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) Spc7 PF08317.11 BAM40864.1 - 1.6e-05 23.9 3.2 2.6e-05 23.2 3.2 1.4 1 0 0 1 1 1 1 Spc7 kinetochore protein ATG16 PF08614.11 BAM40864.1 - 4e-05 23.9 5.7 4e-05 23.9 5.7 1.9 2 1 0 2 2 2 1 Autophagy protein 16 (ATG16) Trimer_CC PF08954.11 BAM40864.1 - 5.7e-05 22.6 7.6 0.0042 16.6 1.5 3.0 2 1 0 3 3 2 2 Trimerisation motif TMF_DNA_bd PF12329.8 BAM40864.1 - 9.4e-05 22.3 9.0 0.00021 21.2 7.7 2.0 2 0 0 2 2 2 1 TATA element modulatory factor 1 DNA binding APG6_N PF17675.1 BAM40864.1 - 0.00024 21.7 6.2 0.00024 21.7 6.2 1.5 2 0 0 2 2 1 1 Apg6 coiled-coil region Sec34 PF04136.15 BAM40864.1 - 0.00047 20.1 3.8 0.00096 19.1 3.8 1.5 1 0 0 1 1 1 1 Sec34-like family TMCO5 PF14992.6 BAM40864.1 - 0.00054 19.6 3.2 0.00072 19.2 3.2 1.2 1 0 0 1 1 1 1 TMCO5 family KLRAQ PF10205.9 BAM40864.1 - 0.0024 18.1 4.2 0.0055 16.9 4.2 1.7 1 0 0 1 1 1 1 Predicted coiled-coil domain-containing protein DivIC PF04977.15 BAM40864.1 - 0.0037 17.0 4.7 0.0098 15.6 4.7 1.7 1 0 0 1 1 1 1 Septum formation initiator MAD PF05557.13 BAM40864.1 - 0.004 15.6 4.4 0.0078 14.6 4.4 1.5 1 0 0 1 1 1 1 Mitotic checkpoint protein Jnk-SapK_ap_N PF09744.9 BAM40864.1 - 0.0056 16.9 5.5 0.012 15.8 5.5 1.6 1 0 0 1 1 1 1 JNK_SAPK-associated protein-1 DUF3450 PF11932.8 BAM40864.1 - 0.0062 15.9 3.6 0.0095 15.3 3.6 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) ZapB PF06005.12 BAM40864.1 - 0.0065 16.9 8.9 0.011 16.2 7.9 1.9 2 0 0 2 2 1 1 Cell division protein ZapB ADIP PF11559.8 BAM40864.1 - 0.0082 16.2 6.7 0.016 15.3 6.7 1.4 1 0 0 1 1 1 1 Afadin- and alpha -actinin-Binding AAA_13 PF13166.6 BAM40864.1 - 0.0085 14.8 1.9 0.014 14.1 1.9 1.3 1 0 0 1 1 1 1 AAA domain DUF4795 PF16043.5 BAM40864.1 - 0.0091 15.6 1.7 0.014 15.1 1.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4795) Uso1_p115_C PF04871.13 BAM40864.1 - 0.0092 16.4 6.2 0.017 15.5 6.2 1.3 1 0 0 1 1 1 1 Uso1 / p115 like vesicle tethering protein, C terminal region CALCOCO1 PF07888.11 BAM40864.1 - 0.0093 14.9 3.5 0.013 14.4 3.5 1.1 1 0 0 1 1 1 1 Calcium binding and coiled-coil domain (CALCOCO1) like EzrA PF06160.12 BAM40864.1 - 0.0094 14.2 4.7 0.014 13.7 4.7 1.2 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA Prominin PF05478.11 BAM40864.1 - 0.01 13.8 1.9 0.014 13.4 1.9 1.2 1 0 0 1 1 1 0 Prominin Exonuc_VII_L PF02601.15 BAM40864.1 - 0.015 14.9 1.9 0.023 14.3 1.9 1.3 1 0 0 1 1 1 0 Exonuclease VII, large subunit Rab5-bind PF09311.11 BAM40864.1 - 0.015 14.7 5.3 0.019 14.3 4.5 1.4 2 0 0 2 2 1 0 Rabaptin-like protein Fib_alpha PF08702.10 BAM40864.1 - 0.021 15.0 6.6 0.095 12.9 2.3 2.4 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family DUF4710 PF15828.5 BAM40864.1 - 0.023 14.8 2.0 0.043 13.9 1.3 1.8 2 0 0 2 2 1 0 Domain of unknown function (DUF4710) Rootletin PF15035.6 BAM40864.1 - 0.024 14.7 5.5 0.042 13.9 5.5 1.3 1 0 0 1 1 1 0 Ciliary rootlet component, centrosome cohesion BLOC1_2 PF10046.9 BAM40864.1 - 0.025 14.9 7.7 0.073 13.4 4.0 2.7 3 0 0 3 3 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 CENP-H PF05837.12 BAM40864.1 - 0.026 14.9 5.6 0.051 14.0 5.6 1.5 1 0 0 1 1 1 0 Centromere protein H (CENP-H) CEP63 PF17045.5 BAM40864.1 - 0.029 14.3 7.0 0.02 14.8 5.1 1.6 2 0 0 2 2 1 0 Centrosomal protein of 63 kDa GIT_CC PF16559.5 BAM40864.1 - 0.051 13.5 6.6 0.18 11.7 6.4 2.0 1 1 1 2 2 2 0 GIT coiled-coil Rho guanine nucleotide exchange factor YabA PF06156.13 BAM40864.1 - 0.054 14.1 4.0 0.075 13.7 3.1 1.8 2 0 0 2 2 1 0 Initiation control protein YabA HAUS-augmin3 PF14932.6 BAM40864.1 - 0.066 12.8 5.8 0.37 10.3 5.3 1.9 2 0 0 2 2 2 0 HAUS augmin-like complex subunit 3 SpecificRecomb PF10136.9 BAM40864.1 - 0.088 11.1 0.4 0.13 10.6 0.4 1.2 1 0 0 1 1 1 0 Site-specific recombinase ALIX_LYPXL_bnd PF13949.6 BAM40864.1 - 0.091 12.0 7.2 0.023 14.0 3.5 1.7 2 0 0 2 2 2 0 ALIX V-shaped domain binding to HIV DUF3552 PF12072.8 BAM40864.1 - 0.092 12.2 7.4 0.21 11.0 6.3 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF3552) Syntaxin-6_N PF09177.11 BAM40864.1 - 0.096 13.2 2.4 0.22 12.1 2.4 1.7 1 0 0 1 1 1 0 Syntaxin 6, N-terminal UPF0242 PF06785.11 BAM40864.1 - 0.11 12.6 8.1 0.21 11.7 5.6 2.0 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0242) N-terminus V_ATPase_I PF01496.19 BAM40864.1 - 0.11 10.4 1.1 0.15 9.9 1.1 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FapA PF03961.13 BAM40864.1 - 0.12 11.0 1.0 0.16 10.6 1.0 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A BRE1 PF08647.11 BAM40864.1 - 0.12 12.4 7.4 0.27 11.3 7.4 1.6 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase Tho2 PF11262.8 BAM40864.1 - 0.12 11.5 2.8 0.074 12.2 1.2 1.4 2 0 0 2 2 1 0 Transcription factor/nuclear export subunit protein 2 TPR_MLP1_2 PF07926.12 BAM40864.1 - 0.19 11.8 8.5 0.083 13.0 5.2 1.9 2 1 0 2 2 1 0 TPR/MLP1/MLP2-like protein zf-C4H2 PF10146.9 BAM40864.1 - 0.2 12.0 4.5 0.27 11.5 4.3 1.4 1 1 0 1 1 1 0 Zinc finger-containing protein YscO PF07321.12 BAM40864.1 - 0.22 11.4 5.1 0.77 9.7 3.5 2.1 2 0 0 2 2 2 0 Type III secretion protein YscO Occludin_ELL PF07303.13 BAM40864.1 - 0.24 12.1 2.8 3.4 8.5 3.0 2.6 1 1 2 3 3 2 0 Occludin homology domain STAT_alpha PF01017.20 BAM40864.1 - 0.27 11.1 6.6 0.5 10.2 6.6 1.3 1 0 0 1 1 1 0 STAT protein, all-alpha domain TMF_TATA_bd PF12325.8 BAM40864.1 - 0.32 11.2 8.3 3.4 7.9 6.7 2.2 2 1 0 2 2 1 0 TATA element modulatory factor 1 TATA binding DUF812 PF05667.11 BAM40864.1 - 0.35 9.7 7.9 0.18 10.6 5.5 1.6 2 0 0 2 2 2 0 Protein of unknown function (DUF812) DASH_Dad3 PF08656.10 BAM40864.1 - 0.48 10.5 5.4 1.5 9.0 5.4 1.9 1 1 0 1 1 1 0 DASH complex subunit Dad3 Fez1 PF06818.15 BAM40864.1 - 0.51 10.8 8.8 0.84 10.1 8.8 1.6 1 1 0 1 1 1 0 Fez1 SlyX PF04102.12 BAM40864.1 - 0.62 10.7 7.4 7.9 7.2 7.4 2.4 1 1 0 1 1 1 0 SlyX DUF16 PF01519.16 BAM40864.1 - 0.65 10.5 7.5 0.76 10.3 6.0 1.8 1 1 0 1 1 1 0 Protein of unknown function DUF16 DUF1664 PF07889.12 BAM40864.1 - 0.67 10.0 3.7 3 7.9 3.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) DUF948 PF06103.11 BAM40864.1 - 0.69 10.2 4.1 2.2 8.6 4.1 1.9 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) DUF2205 PF10224.9 BAM40864.1 - 0.74 9.8 5.7 1.5 8.9 5.7 1.6 1 0 0 1 1 1 0 Short coiled-coil protein KxDL PF10241.9 BAM40864.1 - 0.83 10.0 8.2 1.3 9.4 6.5 2.1 2 1 0 2 2 1 0 Uncharacterized conserved protein Cnn_1N PF07989.11 BAM40864.1 - 0.83 9.9 8.6 5.8 7.1 8.7 2.2 1 1 0 1 1 1 0 Centrosomin N-terminal motif 1 bZIP_1 PF00170.21 BAM40864.1 - 0.84 9.8 11.8 0.31 11.2 5.1 2.7 2 1 0 3 3 2 0 bZIP transcription factor XhlA PF10779.9 BAM40864.1 - 1.4 9.2 4.9 3.5 7.9 4.9 1.8 1 0 0 1 1 1 0 Haemolysin XhlA WD40_alt PF14077.6 BAM40864.1 - 1.4 8.9 6.5 7.7 6.5 0.0 3.3 2 1 0 3 3 2 0 Alternative WD40 repeat motif Syntaxin_2 PF14523.6 BAM40864.1 - 1.5 9.3 9.1 2 8.8 7.0 2.0 2 0 0 2 2 2 0 Syntaxin-like protein FlaC_arch PF05377.11 BAM40864.1 - 3.6 8.1 6.8 4.4 7.8 3.0 2.5 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) Spc24 PF08286.11 BAM40864.1 - 5.4 7.3 10.4 3.8 7.8 6.5 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Swi5 PF07061.11 BAM40864.1 - 9.1 6.5 8.3 4.9 7.3 3.4 2.9 3 1 1 4 4 3 0 Swi5 FAINT PF04385.15 BAM40868.1 - 8.6e-23 80.2 21.8 1.4e-09 37.9 2.7 4.9 4 0 0 4 4 4 3 Domain of unknown function, DUF529 Hydrolase_4 PF12146.8 BAM40868.1 - 1.1e-21 77.2 0.0 1e-13 51.1 0.0 2.6 3 0 0 3 3 3 2 Serine aminopeptidase, S33 Abhydrolase_3 PF07859.13 BAM40868.1 - 0.01 15.7 0.0 0.024 14.5 0.0 1.7 1 1 0 1 1 1 0 alpha/beta hydrolase fold Abhydrolase_2 PF02230.16 BAM40868.1 - 0.019 14.8 0.0 6 6.6 0.0 2.4 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Lipase_3 PF01764.25 BAM40868.1 - 0.031 14.2 0.0 0.077 12.9 0.0 1.6 1 0 0 1 1 1 0 Lipase (class 3) Abhydrolase_1 PF00561.20 BAM40868.1 - 0.036 13.7 0.6 0.51 9.9 0.6 2.5 1 1 0 1 1 1 0 alpha/beta hydrolase fold DUF2974 PF11187.8 BAM40868.1 - 0.082 12.4 0.0 0.18 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) FEZ PF07763.13 BAM40869.1 - 0.096 12.4 0.1 0.1 12.3 0.1 1.0 1 0 0 1 1 1 0 FEZ-like protein RRM_1 PF00076.22 BAM40870.1 - 1.6e-07 31.0 1.6 1.3e-06 28.1 0.1 3.1 4 0 0 4 4 4 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) zf-Tim10_DDP PF02953.15 BAM40871.1 - 1.6e-15 56.5 1.1 2e-15 56.1 1.1 1.2 1 0 0 1 1 1 1 Tim10/DDP family zinc finger MPC PF03650.13 BAM40872.1 - 4.4e-34 116.9 0.1 5e-34 116.7 0.1 1.1 1 0 0 1 1 1 1 Mitochondrial pyruvate carriers WD40 PF00400.32 BAM40873.1 - 3.6e-40 135.2 24.1 7.7e-07 29.7 0.2 7.2 7 0 0 7 7 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM40873.1 - 2.5e-13 50.1 1.7 0.0055 17.0 0.0 5.9 3 2 2 5 5 5 4 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 BAM40873.1 - 0.0001 21.4 6.7 0.88 8.5 0.0 3.8 2 1 1 3 3 3 3 WD40 region of Ge1, enhancer of mRNA-decapping protein IKI3 PF04762.12 BAM40873.1 - 0.099 10.6 1.2 0.22 9.4 0.6 1.9 1 1 1 2 2 2 0 IKI3 family zf-C2H2 PF00096.26 BAM40874.1 - 4.4e-21 74.1 47.8 5.6e-05 23.4 4.8 7.3 7 0 0 7 7 7 6 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 BAM40874.1 - 2.7e-14 52.6 40.2 0.00079 20.1 3.2 7.3 7 0 0 7 7 7 5 C2H2-type zinc finger zf-H2C2_2 PF13465.6 BAM40874.1 - 6.5e-09 35.8 43.3 0.0004 20.7 0.1 7.7 8 0 0 8 8 8 3 Zinc-finger double domain zf-met PF12874.7 BAM40874.1 - 3.4e-08 33.6 21.6 3.8e-06 27.1 1.5 6.2 6 0 0 6 6 6 1 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 BAM40874.1 - 4.3e-05 23.7 21.6 0.0025 18.0 2.4 6.4 6 0 0 6 6 6 2 Zinc-finger double-stranded RNA-binding zf-C2H2_8 PF15909.5 BAM40874.1 - 0.00026 21.2 20.9 0.45 10.9 4.6 4.1 1 1 2 4 4 4 3 C2H2-type zinc ribbon RNA_POL_M_15KD PF02150.16 BAM40874.1 - 0.011 15.6 2.8 12 5.9 0.0 4.2 4 0 0 4 4 4 0 RNA polymerases M/15 Kd subunit zf-C2H2_11 PF16622.5 BAM40874.1 - 0.055 13.2 20.3 0.47 10.2 0.9 4.6 5 0 0 5 5 4 0 zinc-finger C2H2-type zf-RRN7 PF11781.8 BAM40874.1 - 0.057 13.1 16.5 6.4 6.6 0.1 5.8 6 0 0 6 6 6 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 IBR PF01485.21 BAM40874.1 - 0.085 13.1 19.7 0.18 12.1 2.2 4.0 3 1 1 4 4 4 0 IBR domain, a half RING-finger domain zf-C2H2_aberr PF17017.5 BAM40874.1 - 0.17 12.0 17.7 2.3 8.3 0.5 4.3 2 2 2 4 4 4 0 Aberrant zinc-finger zf_UBZ PF18439.1 BAM40874.1 - 0.25 11.0 9.3 6.5 6.4 0.0 5.1 5 0 0 5 5 5 0 Ubiquitin-Binding Zinc Finger zf_Hakai PF18408.1 BAM40874.1 - 0.35 10.6 0.1 0.35 10.6 0.1 3.8 5 0 0 5 5 4 0 C2H2 Hakai zinc finger domain zinc_ribbon_12 PF11331.8 BAM40874.1 - 0.95 9.3 0.1 0.95 9.3 0.1 3.9 5 0 0 5 5 5 0 Probable zinc-ribbon domain zf-C2H2_6 PF13912.6 BAM40874.1 - 1.8 8.6 38.2 2.1 8.5 1.6 6.4 7 0 0 7 7 7 0 C2H2-type zinc finger zinc_ribbon_5 PF13719.6 BAM40874.1 - 2 8.3 13.1 2.7 7.8 0.5 4.1 4 0 0 4 4 4 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 BAM40874.1 - 2.6 8.3 15.5 6.3 7.0 0.2 4.5 6 0 0 6 6 4 0 Zinc ribbon domain CpXC PF14353.6 BAM40874.1 - 3.7 7.6 11.1 5.6 7.0 0.2 4.0 2 2 1 3 3 3 0 CpXC protein LSM PF01423.22 BAM40875.1 - 9.2e-16 57.3 0.1 1.1e-15 57.0 0.1 1.1 1 0 0 1 1 1 1 LSM domain DAO PF01266.24 BAM40878.1 - 3.5e-41 142.0 0.0 4.8e-41 141.5 0.0 1.2 1 0 0 1 1 1 1 FAD dependent oxidoreductase DAO_C PF16901.5 BAM40878.1 - 1.1e-37 128.7 0.0 2.1e-37 127.8 0.0 1.5 1 0 0 1 1 1 1 C-terminal domain of alpha-glycerophosphate oxidase FAD_binding_2 PF00890.24 BAM40878.1 - 8.8e-08 31.6 0.6 1.2e-05 24.6 0.4 2.2 2 0 0 2 2 2 2 FAD binding domain FAD_binding_3 PF01494.19 BAM40878.1 - 0.00037 19.8 0.1 0.0021 17.3 0.1 2.0 2 0 0 2 2 2 1 FAD binding domain Pyr_redox_2 PF07992.14 BAM40878.1 - 0.00082 18.7 0.0 0.0017 17.6 0.0 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 BAM40878.1 - 0.0035 16.5 0.8 0.019 14.0 0.2 2.0 2 0 0 2 2 2 1 Glucose inhibited division protein A FAD_oxidored PF12831.7 BAM40878.1 - 0.004 16.6 0.4 0.0075 15.7 0.0 1.6 2 0 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 BAM40878.1 - 0.0057 16.9 0.1 0.011 15.9 0.1 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 BAM40878.1 - 0.026 13.8 0.1 0.11 11.7 0.0 2.0 3 0 0 3 3 3 0 Thi4 family K_oxygenase PF13434.6 BAM40878.1 - 0.038 13.1 0.0 1 8.4 0.0 2.2 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) Lycopene_cycl PF05834.12 BAM40878.1 - 0.063 12.3 0.1 0.1 11.7 0.1 1.3 1 0 0 1 1 1 0 Lycopene cyclase protein GMC_oxred_N PF00732.19 BAM40878.1 - 0.087 12.2 0.4 1.1 8.5 0.1 2.1 2 0 0 2 2 2 0 GMC oxidoreductase Pyr_redox PF00070.27 BAM40878.1 - 0.15 12.7 0.1 0.43 11.2 0.1 1.8 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Secretin_N_2 PF07655.13 BAM40879.1 - 0.012 16.1 6.4 0.012 16.1 6.4 6.0 6 2 0 6 6 6 0 Secretin N-terminal domain W2 PF02020.18 BAM40880.1 - 0.66 10.1 5.8 2.6 8.2 5.8 2.1 1 1 0 1 1 1 0 eIF4-gamma/eIF5/eIF2-epsilon RF-1 PF00472.20 BAM40884.1 - 5.9e-11 42.3 0.0 7e-11 42.1 0.0 1.1 1 0 0 1 1 1 1 RF-1 domain Cpn60_TCP1 PF00118.24 BAM40886.1 - 4e-147 490.8 4.9 4.5e-147 490.6 4.9 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Spc7 PF08317.11 BAM40887.1 - 0.069 12.0 88.4 0.22 10.4 7.7 4.2 1 1 3 4 4 4 0 Spc7 kinetochore protein Corona_NS2A PF05213.12 BAM40888.1 - 0.037 13.4 0.0 0.064 12.6 0.0 1.3 1 0 0 1 1 1 0 Coronavirus NS2A protein HMA PF00403.26 BAM40888.1 - 0.11 12.9 0.0 0.4 11.2 0.0 1.9 2 0 0 2 2 2 0 Heavy-metal-associated domain Mago-bind PF09282.10 BAM40889.1 - 8.3e-14 51.1 3.1 1.5e-13 50.4 3.1 1.4 1 0 0 1 1 1 1 Mago binding DUF2981 PF11200.8 BAM40889.1 - 3.8 7.1 6.8 4.8 6.8 6.8 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) eIF-5_eIF-2B PF01873.17 BAM40891.1 - 8.6e-35 119.1 0.0 1.4e-34 118.4 0.0 1.4 1 0 0 1 1 1 1 Domain found in IF2B/IF5 W2 PF02020.18 BAM40891.1 - 1.7e-07 31.2 0.0 4.3e-07 30.0 0.0 1.7 1 0 0 1 1 1 1 eIF4-gamma/eIF5/eIF2-epsilon Ski_Sno PF02437.17 BAM40891.1 - 0.052 13.3 0.1 0.1 12.4 0.1 1.4 1 0 0 1 1 1 0 SKI/SNO/DAC family Ribosomal_L7Ae PF01248.26 BAM40893.1 - 6.2e-22 77.2 0.1 7.8e-22 76.8 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family NB-LRR PF12061.8 BAM40893.1 - 0.14 11.4 0.1 0.21 10.9 0.1 1.4 1 0 0 1 1 1 0 Late blight resistance protein R1 Ribosomal_S19e PF01090.19 BAM40894.1 - 8.7e-50 168.0 0.0 1e-49 167.8 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e GDI PF00996.18 BAM40895.1 - 1.3e-180 600.6 0.1 1.6e-180 600.3 0.1 1.0 1 0 0 1 1 1 1 GDP dissociation inhibitor NAD_binding_8 PF13450.6 BAM40895.1 - 0.052 13.8 0.0 0.11 12.8 0.0 1.5 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain SH3_14 PF18343.1 BAM40895.1 - 0.06 13.4 0.3 0.75 9.9 0.0 2.8 4 0 0 4 4 4 0 Dda helicase SH3 domain SWIRM PF04433.17 BAM40897.1 - 1.5e-21 76.5 0.1 5e-21 74.8 0.1 2.0 1 0 0 1 1 1 1 SWIRM domain Myb_DNA-binding PF00249.31 BAM40897.1 - 1.2e-10 41.4 0.0 2.7e-10 40.3 0.0 1.7 1 0 0 1 1 1 1 Myb-like DNA-binding domain Myb_DNA-bind_6 PF13921.6 BAM40897.1 - 7.9e-06 26.0 0.0 2.5e-05 24.4 0.0 1.9 1 0 0 1 1 1 1 Myb-like DNA-binding domain SWIRM-assoc_1 PF16495.5 BAM40897.1 - 7.7e-05 22.6 4.8 0.00017 21.5 4.8 1.6 1 0 0 1 1 1 1 SWIRM-associated region 1 Myb_DNA-bind_7 PF15963.5 BAM40897.1 - 0.004 17.0 2.6 0.005 16.7 0.1 2.5 2 0 0 2 2 2 1 Myb DNA-binding like DUF1951 PF09188.10 BAM40899.1 - 0.061 13.3 0.6 0.15 12.0 0.1 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1951) LRR_12 PF18837.1 BAM40899.1 - 0.11 12.2 0.7 0.27 10.9 0.0 2.0 2 0 0 2 2 2 0 Leucine-rich repeat PPTA PF01239.22 BAM40900.1 - 3e-26 90.3 9.2 3.2e-06 26.7 0.2 4.8 4 0 0 4 4 4 4 Protein prenyltransferase alpha subunit repeat Ribosomal_S17e PF00833.18 BAM40903.1 - 3.7e-58 194.8 0.3 4.3e-58 194.6 0.3 1.0 1 0 0 1 1 1 1 Ribosomal S17 Arm-DNA-bind_2 PF12167.8 BAM40903.1 - 0.038 13.9 0.1 0.066 13.1 0.1 1.4 1 0 0 1 1 1 0 Arm DNA-binding domain Met_10 PF02475.16 BAM40904.1 - 2.3e-35 122.1 1.2 2.3e-35 122.1 1.2 2.4 2 1 0 2 2 2 1 Met-10+ like-protein Laminin_II PF06009.12 BAM40904.1 - 0.013 15.5 2.3 0.014 15.4 0.1 2.1 2 0 0 2 2 2 0 Laminin Domain II RyR PF02026.16 BAM40904.1 - 0.12 12.5 1.8 8.8 6.6 0.2 2.6 2 0 0 2 2 2 0 RyR domain CSN5_C PF18323.1 BAM40904.1 - 0.79 10.7 6.8 0.41 11.6 2.6 2.4 2 0 0 2 2 2 0 Cop9 signalosome subunit 5 C-terminal domain SET PF00856.28 BAM40905.1 - 6.6e-07 29.9 0.1 7.8e-07 29.6 0.1 1.2 1 0 0 1 1 1 1 SET domain EF-hand_11 PF08976.11 BAM40906.1 - 0.44 11.4 3.7 11 6.9 0.3 3.6 2 1 1 3 3 3 0 EF-hand domain Ribosomal_L28e PF01778.17 BAM40907.1 - 8e-28 97.5 0.3 8e-28 97.5 0.3 1.8 2 0 0 2 2 2 1 Ribosomal L28e protein family Mak16 PF04874.14 BAM40907.1 - 4.7e-17 62.4 14.9 1.3e-16 61.0 14.9 1.8 1 1 0 1 1 1 1 Mak16 protein C-terminal region DUF2250 PF10007.9 BAM40907.1 - 0.095 12.8 1.9 0.23 11.6 1.9 1.6 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) PBECR1 PF18809.1 BAM40907.1 - 0.36 11.5 4.1 0.21 12.2 0.9 2.2 1 1 0 2 2 2 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1 LZ_Tnp_IS66 PF13007.7 BAM40907.1 - 0.38 11.6 5.2 0.29 12.0 1.3 2.3 2 0 0 2 2 2 0 Transposase C of IS166 homeodomain DUF3523 PF12037.8 BAM40908.1 - 7.4e-85 284.5 23.5 1.1e-84 283.9 23.5 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF3523) AAA PF00004.29 BAM40908.1 - 3.1e-22 79.4 0.0 7.3e-22 78.2 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 BAM40908.1 - 4.2e-06 27.3 0.4 0.0033 17.8 0.0 3.1 2 1 1 3 3 3 1 AAA ATPase domain RuvB_N PF05496.12 BAM40908.1 - 8.3e-05 22.4 0.0 0.00032 20.5 0.0 2.1 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 BAM40908.1 - 0.00016 22.0 2.8 0.032 14.5 0.0 3.2 2 1 0 3 3 3 1 AAA domain AAA_24 PF13479.6 BAM40908.1 - 0.00055 19.7 0.0 0.0021 17.8 0.0 2.1 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 BAM40908.1 - 0.0018 17.7 1.0 0.016 14.6 0.0 2.7 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI Sigma54_activ_2 PF14532.6 BAM40908.1 - 0.0029 17.7 0.0 0.0086 16.2 0.0 1.9 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_7 PF12775.7 BAM40908.1 - 0.0076 15.8 0.3 0.027 14.0 0.0 2.1 2 0 0 2 2 2 1 P-loop containing dynein motor region IstB_IS21 PF01695.17 BAM40908.1 - 0.01 15.6 0.0 0.033 13.9 0.0 1.9 1 0 0 1 1 1 0 IstB-like ATP binding protein ATPase PF06745.13 BAM40908.1 - 0.014 14.8 0.0 0.014 14.8 0.0 3.0 3 1 1 4 4 4 0 KaiC RNA_helicase PF00910.22 BAM40908.1 - 0.021 15.2 0.0 0.067 13.6 0.0 1.9 1 0 0 1 1 1 0 RNA helicase AAA_lid_3 PF17862.1 BAM40908.1 - 0.022 14.6 0.0 0.075 12.8 0.0 1.9 1 0 0 1 1 1 0 AAA+ lid domain AAA_5 PF07728.14 BAM40908.1 - 0.023 14.7 0.2 0.023 14.7 0.2 3.3 3 1 0 3 3 2 0 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 BAM40908.1 - 0.025 14.7 0.9 0.087 13.0 0.0 2.4 2 1 0 2 2 2 0 AAA domain AAA_18 PF13238.6 BAM40908.1 - 0.03 14.9 0.1 0.03 14.9 0.1 3.1 2 2 0 2 2 2 0 AAA domain AAA_25 PF13481.6 BAM40908.1 - 0.12 12.0 0.0 0.3 10.6 0.0 1.6 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 BAM40908.1 - 0.13 12.2 0.0 0.13 12.2 0.0 2.5 4 0 0 4 4 4 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_11 PF13086.6 BAM40908.1 - 0.32 10.8 0.0 0.32 10.8 0.0 3.2 2 1 0 2 2 1 0 AAA domain AAA_28 PF13521.6 BAM40908.1 - 0.78 10.0 0.0 0.78 10.0 0.0 2.9 2 1 0 2 2 2 0 AAA domain Ins_P5_2-kin PF06090.12 BAM40909.1 - 7.1e-19 68.4 0.1 1.9e-18 67.0 0.1 1.8 1 1 0 1 1 1 1 Inositol-pentakisphosphate 2-kinase HTH_16 PF12645.7 BAM40910.1 - 0.57 10.3 3.6 11 6.2 3.6 2.3 1 1 0 1 1 1 0 Helix-turn-helix domain Ribosomal_S3Ae PF01015.18 BAM40912.1 - 2e-86 288.7 1.8 2.4e-86 288.5 1.8 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family TMA7 PF09072.10 BAM40913.1 - 7.1e-07 30.0 12.2 8.7e-07 29.7 12.2 1.2 1 0 0 1 1 1 1 Translation machinery associated TMA7 GTP_EFTU PF00009.27 BAM40914.1 - 1.2e-52 178.3 0.0 1.6e-52 177.9 0.0 1.1 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 BAM40914.1 - 6.1e-19 68.4 0.0 1.6e-18 67.1 0.0 1.7 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 BAM40914.1 - 2.1e-16 60.0 2.7 4e-16 59.2 2.7 1.5 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 BAM40914.1 - 4.5e-05 23.5 0.0 9.3e-05 22.5 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 BAM40914.1 - 0.0028 17.6 0.1 0.0076 16.2 0.0 1.7 2 0 0 2 2 2 1 RsgA GTPase cobW PF02492.19 BAM40914.1 - 0.078 12.6 0.1 0.2 11.2 0.0 1.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.9 BAM40914.1 - 0.42 10.4 1.4 9.8 5.9 0.1 3.1 4 0 0 4 4 4 0 Ethanolamine utilisation - propanediol utilisation Pkinase PF00069.25 BAM40915.1 - 1.2e-10 41.2 1.1 2.3e-08 33.7 0.3 2.9 2 1 0 2 2 2 1 Protein kinase domain Kinase-like PF14531.6 BAM40915.1 - 0.0021 17.4 0.0 1.2 8.4 0.0 2.5 1 1 0 2 2 2 2 Kinase-like Spore_III_AF PF09581.10 BAM40915.1 - 0.0062 16.6 0.3 0.016 15.3 0.3 1.6 1 1 0 1 1 1 1 Stage III sporulation protein AF (Spore_III_AF) YnfE PF17452.2 BAM40915.1 - 0.12 12.6 2.0 0.15 12.4 0.4 2.0 2 0 0 2 2 2 0 Uncharacterized YnfE-like APG6_N PF17675.1 BAM40915.1 - 0.23 12.0 10.5 0.75 10.3 7.2 3.0 2 1 0 2 2 2 0 Apg6 coiled-coil region RelB_N PF18506.1 BAM40915.1 - 9 6.2 7.2 0.85 9.5 1.4 2.1 2 0 0 2 2 2 0 RelB Antitoxin alpha helical domain SRP40_C PF05022.12 BAM40916.1 - 2e-17 63.8 2.6 2e-17 63.8 2.6 1.7 2 0 0 2 2 2 1 SRP40, C-terminal domain Rpr2 PF04032.16 BAM40917.1 - 7.2e-05 23.0 3.4 0.00011 22.4 3.4 1.3 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain DZR PF12773.7 BAM40917.1 - 0.0031 17.5 2.9 0.0049 16.9 2.9 1.3 1 0 0 1 1 1 1 Double zinc ribbon zf_C2H2_13 PF18508.1 BAM40917.1 - 2 8.1 8.4 0.1 12.2 1.4 2.4 2 1 0 2 2 2 0 Zinc finger domain TAP35_44 PF07265.11 BAM40919.1 - 0.12 12.4 1.1 0.14 12.2 1.1 1.2 1 0 0 1 1 1 0 Tapetum specific protein TAP35/TAP44 Glyco_hydro_31 PF01055.26 BAM40920.1 - 0.03 13.5 0.0 0.044 13.0 0.0 1.1 1 0 0 1 1 1 0 Glycosyl hydrolases family 31 TAF PF02969.17 BAM40921.1 - 3.2e-07 30.4 1.5 2.7e-06 27.4 0.8 2.7 2 1 1 3 3 3 1 TATA box binding protein associated factor (TAF) TAF6_C PF07571.13 BAM40921.1 - 0.00098 19.4 0.1 0.0046 17.2 0.1 2.2 1 1 0 1 1 1 1 TAF6 C-terminal HEAT repeat domain SprT-like PF10263.9 BAM40921.1 - 0.12 12.3 0.0 0.32 10.9 0.0 1.7 1 0 0 1 1 1 0 SprT-like family DUF1428 PF07237.11 BAM40921.1 - 0.13 12.6 0.0 0.25 11.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1428) Topoisom_bac PF01131.20 BAM40922.1 - 5.6e-99 332.0 0.0 8.7e-99 331.3 0.0 1.2 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 BAM40922.1 - 0.045 14.0 0.0 0.28 11.4 0.0 2.2 2 0 0 2 2 2 0 Toprim domain Porphyrn_cat_1 PF18206.1 BAM40922.1 - 0.084 13.5 0.1 0.37 11.4 0.1 2.1 2 0 0 2 2 2 0 Porphyranase catalytic subdomain 1 RRM_1 PF00076.22 BAM40923.1 - 6.1e-39 131.7 0.1 5e-15 55.1 0.0 3.5 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 BAM40923.1 - 1.3e-07 31.4 0.0 0.0091 15.8 0.0 3.1 3 0 0 3 3 3 2 Occluded RNA-recognition motif DUF1866 PF08952.11 BAM40923.1 - 3.4e-05 23.7 0.1 0.039 13.8 0.0 2.5 2 0 0 2 2 2 2 Domain of unknown function (DUF1866) RRM_3 PF08777.11 BAM40923.1 - 9.6e-05 22.4 0.5 0.89 9.6 0.0 3.6 3 0 0 3 3 3 2 RNA binding motif Nup35_RRM_2 PF14605.6 BAM40923.1 - 0.022 14.7 0.1 1.4 9.0 0.0 3.1 3 0 0 3 3 3 0 Nup53/35/40-type RNA recognition motif DUF4551 PF15087.6 BAM40923.1 - 3.3 6.4 22.3 5 5.8 22.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4551) DUF936 PF06075.12 BAM40923.1 - 3.9 6.3 32.3 5.7 5.7 32.3 1.3 1 0 0 1 1 1 0 Plant protein of unknown function (DUF936) DUF3273 PF11677.8 BAM40925.1 - 2.4e-103 345.1 9.7 2.7e-103 344.9 9.7 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3273) Vps52 PF04129.12 BAM40926.1 - 5.6e-31 107.9 15.4 9e-31 107.2 15.4 1.3 1 0 0 1 1 1 1 Vps52 / Sac2 family Laminin_II PF06009.12 BAM40926.1 - 2.2 8.3 5.7 8.8 6.3 2.6 3.0 1 1 1 2 2 2 0 Laminin Domain II V-ATPase_G PF03179.15 BAM40927.1 - 3.2e-14 53.3 4.1 3.8e-14 53.1 4.1 1.0 1 0 0 1 1 1 1 Vacuolar (H+)-ATPase G subunit ATP-synt_B PF00430.18 BAM40927.1 - 3.2e-05 24.0 5.4 4.1e-05 23.7 5.4 1.2 1 0 0 1 1 1 1 ATP synthase B/B' CF(0) DUF3301 PF11743.8 BAM40927.1 - 0.044 13.4 0.3 0.06 13.0 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3301) Mgr1 PF08602.10 BAM40927.1 - 0.085 11.7 1.7 0.087 11.6 1.7 1.0 1 0 0 1 1 1 0 Mgr1-like, i-AAA protease complex subunit Acetyltransf_1 PF00583.25 BAM40928.1 - 4.5e-12 46.2 0.0 6.4e-12 45.7 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 BAM40928.1 - 0.00021 21.6 0.0 0.00038 20.8 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 BAM40928.1 - 0.00065 19.6 0.0 0.0012 18.8 0.0 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 BAM40928.1 - 0.012 15.6 0.0 0.023 14.7 0.0 1.4 1 0 0 1 1 1 0 FR47-like protein ODC_AZ PF02100.17 BAM40928.1 - 0.031 14.2 0.0 0.052 13.5 0.0 1.4 1 0 0 1 1 1 0 Ornithine decarboxylase antizyme Ribosomal_L23 PF00276.20 BAM40929.1 - 2e-12 47.3 0.1 2e-12 47.3 0.1 3.2 2 2 0 2 2 2 1 Ribosomal protein L23 Ribosomal_L23eN PF03939.13 BAM40929.1 - 8e-05 22.8 15.0 0.00019 21.6 15.0 1.7 1 0 0 1 1 1 1 Ribosomal protein L23, N-terminal domain DUF1198 PF06711.11 BAM40929.1 - 0.011 15.8 0.1 0.034 14.2 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1198) SRPRB PF09439.10 BAM40929.1 - 0.015 14.8 0.3 0.022 14.2 0.3 1.4 1 1 0 1 1 1 0 Signal recognition particle receptor beta subunit Paf1 PF03985.13 BAM40930.1 - 2.2e-07 30.3 20.6 0.0067 15.5 16.9 3.8 2 1 0 2 2 2 2 Paf1 TFIIE-A_C PF11521.8 BAM40930.1 - 0.16 12.2 0.1 0.16 12.2 0.1 3.1 2 1 0 2 2 2 0 C-terminal general transcription factor TFIIE alpha Orthopox_B11R PF07033.11 BAM40931.1 - 1.7 8.5 4.6 8.2 6.3 0.1 3.1 2 0 0 2 2 2 0 Orthopoxvirus B11R protein Got1 PF04178.12 BAM40932.1 - 3.5e-24 85.4 23.2 5.5e-24 84.8 23.2 1.3 1 0 0 1 1 1 1 Got1/Sft2-like family RCC1 PF00415.18 BAM40934.1 - 1.3e-36 125.0 2.4 3.4e-09 37.2 0.0 8.4 8 0 0 8 8 8 5 Regulator of chromosome condensation (RCC1) repeat RCC1_2 PF13540.6 BAM40934.1 - 1.2e-23 82.3 11.0 1.8e-06 27.6 0.1 6.0 7 0 0 7 7 7 4 Regulator of chromosome condensation (RCC1) repeat zf-RanBP PF00641.18 BAM40934.1 - 0.009 15.3 8.7 0.02 14.2 8.7 1.5 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others Kelch_4 PF13418.6 BAM40934.1 - 0.039 14.0 1.2 4.1 7.5 0.1 3.1 2 0 0 2 2 2 0 Galactose oxidase, central domain eIF2A PF08662.11 BAM40934.1 - 0.081 12.8 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 Eukaryotic translation initiation factor eIF2A CCDC106 PF15794.5 BAM40934.1 - 3 7.5 5.9 3.1 7.5 3.9 2.0 2 0 0 2 2 2 0 Coiled-coil domain-containing protein 106 TAXi_N PF14543.6 BAM40935.1 - 5.4e-24 85.4 2.0 5.4e-24 85.4 2.0 1.9 2 0 0 2 2 2 1 Xylanase inhibitor N-terminal Asp PF00026.23 BAM40935.1 - 1.3e-23 83.9 7.7 1.8e-22 80.2 7.7 2.0 1 1 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_C PF14541.6 BAM40935.1 - 3.9e-16 59.3 0.1 6.2e-16 58.6 0.1 1.3 1 0 0 1 1 1 1 Xylanase inhibitor C-terminal RNA_POL_M_15KD PF02150.16 BAM40935.1 - 0.088 12.7 1.7 0.93 9.4 1.4 2.5 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit UCH PF00443.29 BAM40936.1 - 4.3e-25 88.7 2.5 4.3e-25 88.7 2.5 2.9 3 2 0 3 3 3 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 BAM40936.1 - 1.4e-09 38.0 13.1 3.5e-07 30.1 1.0 3.4 2 1 1 3 3 3 2 Ubiquitin carboxyl-terminal hydrolase MMS19_N PF14500.6 BAM40936.1 - 0.055 13.0 0.2 6.8 6.2 0.0 2.8 3 0 0 3 3 3 0 Dos2-interacting transcription regulator of RNA-Pol-II TssD PF17642.1 BAM40936.1 - 0.093 12.5 1.1 0.54 10.1 1.0 2.1 2 0 0 2 2 2 0 Hemolysin coregulated protein Hcp (TssD) LYTB PF02401.18 BAM40937.1 - 1.7e-79 266.8 0.9 1.9e-79 266.6 0.9 1.0 1 0 0 1 1 1 1 LytB protein PCP PF02429.15 BAM40937.1 - 0.038 14.3 0.1 0.097 13.0 0.1 1.6 2 0 0 2 2 2 0 Peridinin-chlorophyll A binding protein Ribosomal_S2 PF00318.20 BAM40937.1 - 0.042 13.1 0.2 3.5 6.8 0.0 2.4 2 0 0 2 2 2 0 Ribosomal protein S2 DUF3228 PF11539.8 BAM40938.1 - 5.9e-82 273.9 0.1 6.7e-82 273.7 0.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3228) DUF2250 PF10007.9 BAM40938.1 - 0.035 14.2 2.0 0.063 13.4 1.4 1.7 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) Sec23_helical PF04815.15 BAM40938.1 - 0.064 13.1 0.0 8.6 6.2 0.0 2.2 2 0 0 2 2 2 0 Sec23/Sec24 helical domain Pyr_redox_2 PF07992.14 BAM40939.1 - 1.6e-45 155.6 0.1 2.2e-45 155.2 0.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 BAM40939.1 - 1.7e-15 57.3 4.1 9.1e-14 51.8 0.4 3.1 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Rieske PF00355.26 BAM40939.1 - 1.9e-12 47.0 0.1 6.9e-12 45.2 0.0 2.0 2 0 0 2 2 2 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 BAM40939.1 - 6.3e-06 26.1 0.1 3.4e-05 23.7 0.0 2.2 3 0 0 3 3 3 1 Rieske-like [2Fe-2S] domain Pyr_redox_3 PF13738.6 BAM40939.1 - 1.5e-05 24.4 0.7 0.016 14.5 0.0 2.3 1 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Reductase_C PF14759.6 BAM40939.1 - 0.00018 22.0 0.0 0.00047 20.7 0.0 1.7 1 0 0 1 1 1 1 Reductase C-terminal GIDA PF01134.22 BAM40939.1 - 0.0026 16.9 1.2 0.34 9.9 0.0 3.0 2 1 1 3 3 3 1 Glucose inhibited division protein A DAO PF01266.24 BAM40939.1 - 0.0061 16.2 0.1 3.1 7.3 0.0 2.6 2 0 0 2 2 2 2 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 BAM40939.1 - 0.013 15.5 1.4 0.13 12.3 0.0 2.7 3 0 0 3 3 3 0 FAD-NAD(P)-binding HI0933_like PF03486.14 BAM40939.1 - 0.042 12.5 0.2 1.4 7.5 0.0 2.3 2 0 0 2 2 2 0 HI0933-like protein ApbA PF02558.16 BAM40939.1 - 0.061 13.0 0.1 1.1 8.9 0.0 2.7 1 1 2 3 3 3 0 Ketopantoate reductase PanE/ApbA Vps39_2 PF10367.9 BAM40939.1 - 0.19 12.2 0.1 0.61 10.5 0.0 1.8 2 0 0 2 2 2 0 Vacuolar sorting protein 39 domain 2 Amino_oxidase PF01593.24 BAM40939.1 - 0.76 9.0 3.2 1.2 8.4 0.2 2.4 2 1 0 3 3 3 0 Flavin containing amine oxidoreductase TrkA_N PF02254.18 BAM40939.1 - 0.78 10.0 2.9 11 6.3 0.1 3.3 4 0 0 4 4 4 0 TrkA-N domain Chorein_N PF12624.7 BAM40941.1 - 5.8e-28 97.3 1.2 3.6e-27 94.8 0.0 3.1 3 0 0 3 3 3 1 N-terminal region of Chorein or VPS13 VPS13 PF16908.5 BAM40941.1 - 1.5e-05 24.9 2.9 1.5e-05 24.9 2.9 2.7 2 1 1 3 3 3 1 Vacuolar sorting-associated protein 13, N-terminal ATG_C PF09333.11 BAM40941.1 - 9.4e-05 22.7 0.0 0.00023 21.5 0.0 1.6 1 0 0 1 1 1 1 Autophagy-related protein C terminal domain DEAD PF00270.29 BAM40942.1 - 1.8e-17 63.7 0.0 3.8e-17 62.6 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 BAM40942.1 - 4.1e-13 49.7 0.0 1.4e-12 47.9 0.0 2.0 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 BAM40942.1 - 0.0078 16.5 0.0 0.033 14.5 0.0 2.2 1 0 0 1 1 1 1 Helicase conserved C-terminal domain S_100 PF01023.19 BAM40942.1 - 0.029 14.1 11.1 0.22 11.2 3.6 3.6 4 0 0 4 4 4 0 S-100/ICaBP type calcium binding domain Ras PF00071.22 BAM40943.1 - 6.1e-57 191.7 0.3 7.5e-57 191.5 0.3 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 BAM40943.1 - 6.9e-34 116.6 0.1 1.1e-33 115.9 0.1 1.3 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 BAM40943.1 - 2e-14 53.4 0.0 2.4e-14 53.2 0.0 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 BAM40943.1 - 3.6e-08 33.5 0.0 6.3e-08 32.7 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 BAM40943.1 - 7.6e-06 25.6 0.4 0.0012 18.5 0.1 2.4 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 BAM40943.1 - 2.4e-05 23.8 0.1 3e-05 23.5 0.1 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region G-alpha PF00503.20 BAM40943.1 - 4.2e-05 22.9 5.6 0.048 12.8 0.2 2.5 1 1 1 2 2 2 2 G-protein alpha subunit RsgA_GTPase PF03193.16 BAM40943.1 - 0.00015 21.7 0.6 0.0037 17.2 0.1 2.6 1 1 2 3 3 3 1 RsgA GTPase SRPRB PF09439.10 BAM40943.1 - 0.0015 18.0 0.0 0.0022 17.5 0.0 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Septin PF00735.18 BAM40943.1 - 0.0019 17.6 0.1 0.0059 15.9 0.1 1.8 2 0 0 2 2 2 1 Septin ATP_bind_1 PF03029.17 BAM40943.1 - 0.0022 17.8 0.3 0.2 11.4 0.1 2.1 1 1 1 2 2 2 1 Conserved hypothetical ATP binding protein TniB PF05621.11 BAM40943.1 - 0.0027 17.1 0.0 0.0049 16.3 0.0 1.4 1 0 0 1 1 1 1 Bacterial TniB protein AAA_16 PF13191.6 BAM40943.1 - 0.0028 18.1 0.0 0.0038 17.6 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain ATPase_2 PF01637.18 BAM40943.1 - 0.003 17.5 0.4 0.0087 16.0 0.4 1.9 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_22 PF13401.6 BAM40943.1 - 0.0054 17.0 0.0 0.011 16.0 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 BAM40943.1 - 0.0078 16.0 0.1 0.014 15.1 0.1 1.6 1 1 0 1 1 1 1 AAA domain cobW PF02492.19 BAM40943.1 - 0.012 15.2 0.1 0.042 13.4 0.0 1.8 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain NACHT PF05729.12 BAM40943.1 - 0.025 14.5 0.0 0.041 13.8 0.0 1.3 1 0 0 1 1 1 0 NACHT domain FeoB_N PF02421.18 BAM40943.1 - 0.034 13.7 0.2 0.53 9.8 0.0 2.4 2 1 1 3 3 3 0 Ferrous iron transport protein B NB-ARC PF00931.22 BAM40943.1 - 0.034 13.3 0.1 0.058 12.6 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain AAA_7 PF12775.7 BAM40943.1 - 0.036 13.6 0.0 0.072 12.6 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region ABC_tran PF00005.27 BAM40943.1 - 0.043 14.3 0.6 0.082 13.4 0.6 1.8 1 1 0 1 1 1 0 ABC transporter RNA_helicase PF00910.22 BAM40943.1 - 0.05 14.0 0.0 0.14 12.6 0.0 1.8 1 0 0 1 1 1 0 RNA helicase PduV-EutP PF10662.9 BAM40943.1 - 0.058 13.1 0.3 0.14 11.9 0.1 1.8 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation AAA_14 PF13173.6 BAM40943.1 - 0.1 12.6 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 BAM40943.1 - 0.11 12.4 0.1 0.21 11.5 0.0 1.5 2 0 0 2 2 2 0 NTPase Rer1 PF03248.13 BAM40944.1 - 3.4e-54 183.1 13.4 3.9e-54 182.9 13.4 1.0 1 0 0 1 1 1 1 Rer1 family NiFe_hyd_SSU_C PF14720.6 BAM40945.1 - 1.6 9.1 4.5 26 5.2 0.2 2.5 2 0 0 2 2 2 0 NiFe/NiFeSe hydrogenase small subunit C-terminal Cullin PF00888.22 BAM40946.1 - 1.2e-54 186.0 39.9 3.2e-54 184.6 39.9 1.6 1 1 0 1 1 1 1 Cullin family Cullin_Nedd8 PF10557.9 BAM40946.1 - 0.00011 22.2 1.2 0.0029 17.6 0.0 3.1 2 0 0 2 2 2 1 Cullin protein neddylation domain DOT1 PF08123.13 BAM40947.1 - 0.00053 19.6 2.2 0.00055 19.5 0.1 2.0 3 0 0 3 3 3 1 Histone methylation protein DOT1 DUF4446 PF14584.6 BAM40947.1 - 0.13 12.3 0.4 6.8 6.7 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) zf-RanBP PF00641.18 BAM40948.1 - 2.5e-06 26.7 2.0 2.5e-06 26.7 2.0 1.8 2 0 0 2 2 2 1 Zn-finger in Ran binding protein and others zf-H2C2_2 PF13465.6 BAM40948.1 - 0.043 14.2 2.0 0.043 14.2 2.0 4.8 5 1 0 5 5 5 0 Zinc-finger double domain Zip PF02535.22 BAM40948.1 - 8.6 5.5 15.0 9.8 5.3 15.0 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter Presenilin PF01080.17 BAM40948.1 - 9.3 4.9 10.9 9.2 4.9 10.9 1.1 1 0 0 1 1 1 0 Presenilin Steroid_dh PF02544.16 BAM40950.1 - 4.8e-32 111.0 10.1 4.8e-32 111.0 10.1 1.5 2 0 0 2 2 2 1 3-oxo-5-alpha-steroid 4-dehydrogenase UN_NPL4 PF11543.8 BAM40950.1 - 0.16 12.4 0.0 0.26 11.8 0.0 1.3 1 0 0 1 1 1 0 Nuclear pore localisation protein NPL4 Alba PF01918.21 BAM40951.1 - 7.1e-17 61.0 0.1 9.7e-17 60.6 0.1 1.2 1 0 0 1 1 1 1 Alba ATP_synt_H PF05493.13 BAM40952.1 - 4.2e-06 27.1 7.7 0.0002 21.8 7.7 2.1 1 1 0 1 1 1 1 ATP synthase subunit H Phtf-FEM1B_bdg PF12129.8 BAM40952.1 - 0.0042 16.9 0.3 0.0048 16.7 0.3 1.1 1 0 0 1 1 1 1 Male germ-cell putative homeodomain transcription factor Peptidase_M56 PF05569.11 BAM40952.1 - 0.018 14.2 0.4 0.02 14.1 0.4 1.0 1 0 0 1 1 1 0 BlaR1 peptidase M56 DUF2182 PF09948.9 BAM40952.1 - 0.038 13.9 0.3 0.055 13.4 0.3 1.3 1 0 0 1 1 1 0 Predicted metal-binding integral membrane protein (DUF2182) AAA_12 PF13087.6 BAM40953.1 - 1.1e-57 194.9 0.0 5.8e-57 192.5 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_11 PF13086.6 BAM40953.1 - 1.3e-39 136.6 2.7 2.1e-24 86.7 0.1 3.3 2 1 1 3 3 3 2 AAA domain AAA_30 PF13604.6 BAM40953.1 - 6.3e-10 39.1 0.0 1.9e-09 37.5 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 BAM40953.1 - 6.9e-10 39.4 0.0 4e-09 36.9 0.0 2.4 2 1 0 2 2 2 1 AAA domain ResIII PF04851.15 BAM40953.1 - 1.5e-05 25.1 0.0 8.1e-05 22.7 0.0 2.3 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit dsrm PF00035.26 BAM40953.1 - 0.00075 20.2 6.0 1.2 9.9 0.4 3.8 3 0 0 3 3 3 2 Double-stranded RNA binding motif PhoH PF02562.16 BAM40953.1 - 0.00098 18.6 0.0 0.23 10.9 0.0 2.8 2 0 0 2 2 2 1 PhoH-like protein AAA PF00004.29 BAM40953.1 - 0.0013 19.2 0.0 0.031 14.7 0.0 2.9 1 1 1 2 2 2 1 ATPase family associated with various cellular activities (AAA) DUF2075 PF09848.9 BAM40953.1 - 0.0026 17.1 0.1 0.21 10.8 0.0 2.9 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) NACHT PF05729.12 BAM40953.1 - 0.0047 16.9 0.0 0.015 15.2 0.0 1.9 1 0 0 1 1 1 1 NACHT domain IstB_IS21 PF01695.17 BAM40953.1 - 0.01 15.6 0.0 0.024 14.4 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_16 PF13191.6 BAM40953.1 - 0.015 15.6 0.0 0.051 14.0 0.0 1.8 1 1 0 1 1 1 0 AAA ATPase domain SH2_2 PF14633.6 BAM40956.1 - 2.4e-21 76.1 0.0 2.4e-21 76.1 0.0 3.0 3 0 0 3 3 3 1 SH2 domain RRM_1 PF00076.22 BAM40956.1 - 4.2e-12 45.7 0.1 9.2e-12 44.6 0.1 1.6 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) HTH_44 PF14641.6 BAM40956.1 - 6.6e-09 36.2 2.9 6.6e-09 36.2 2.9 2.8 2 0 0 2 2 2 1 Helix-turn-helix DNA-binding domain of SPT6 HHH_7 PF14635.6 BAM40956.1 - 1.7e-08 34.7 0.5 0.00027 21.3 0.1 2.9 2 0 0 2 2 2 2 Helix-hairpin-helix motif RRM_3 PF08777.11 BAM40956.1 - 3.6e-05 23.7 0.1 0.00022 21.2 0.1 2.5 1 0 0 1 1 1 1 RNA binding motif ADIP PF11559.8 BAM40957.1 - 0.0057 16.7 2.7 0.0057 16.7 2.7 4.0 4 1 0 5 5 5 1 Afadin- and alpha -actinin-Binding bZIP_1 PF00170.21 BAM40957.1 - 0.83 9.8 14.7 0.21 11.7 7.6 3.3 2 0 0 2 2 2 0 bZIP transcription factor HALZ PF02183.18 BAM40957.1 - 0.91 9.8 16.1 1.8 8.9 1.3 3.8 4 0 0 4 4 4 0 Homeobox associated leucine zipper ATG16 PF08614.11 BAM40958.1 - 0.056 13.7 27.1 0.36 11.0 7.8 2.8 1 1 1 2 2 2 0 Autophagy protein 16 (ATG16) Methyltransf_21 PF05050.12 BAM40958.1 - 2.9 7.9 6.8 0.9 9.5 2.0 2.3 1 1 1 2 2 2 0 Methyltransferase FkbM domain EF-hand_4 PF12763.7 BAM40959.1 - 0.11 12.4 2.5 0.19 11.7 0.2 2.5 3 0 0 3 3 3 0 Cytoskeletal-regulatory complex EF hand EF-hand_7 PF13499.6 BAM40961.1 - 3.6e-25 88.2 2.8 1.9e-14 53.8 1.2 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_1 PF00036.32 BAM40961.1 - 3e-24 82.7 8.2 1.9e-07 30.1 0.0 4.2 4 0 0 4 4 4 3 EF hand EF-hand_6 PF13405.6 BAM40961.1 - 7.6e-21 72.2 6.6 3.1e-08 32.9 0.0 4.3 4 1 0 4 4 4 3 EF-hand domain EF-hand_8 PF13833.6 BAM40961.1 - 6.7e-18 64.3 10.8 8.7e-12 44.7 0.3 4.1 1 1 3 4 4 4 4 EF-hand domain pair EF-hand_5 PF13202.6 BAM40961.1 - 1e-09 37.4 7.3 0.00021 20.6 0.3 3.4 3 0 0 3 3 3 3 EF hand EF-hand_9 PF14658.6 BAM40961.1 - 2e-09 37.6 0.1 1.8e-05 25.0 0.0 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_14 PF17959.1 BAM40961.1 - 4.4e-07 30.1 0.4 0.024 15.0 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain EF-hand_11 PF08976.11 BAM40961.1 - 0.0002 22.2 0.2 0.014 16.3 0.1 2.2 1 1 1 2 2 2 1 EF-hand domain EF-hand_4 PF12763.7 BAM40961.1 - 0.0038 17.2 2.8 0.67 9.9 0.2 3.0 1 1 1 3 3 3 1 Cytoskeletal-regulatory complex EF hand SPARC_Ca_bdg PF10591.9 BAM40961.1 - 0.05 13.9 0.1 1.6 9.0 0.1 2.1 1 1 1 2 2 2 0 Secreted protein acidic and rich in cysteine Ca binding region SUB1_ProdP9 PF18213.1 BAM40961.1 - 0.079 12.8 0.1 0.18 11.7 0.1 1.6 1 0 0 1 1 1 0 SUB1 protease Prodomain ProdP9 PMBR PF09373.10 BAM40961.1 - 0.12 12.6 0.2 18 5.7 0.0 3.7 3 1 1 4 4 4 0 Pseudomurein-binding repeat DUF1002 PF06207.11 BAM40961.1 - 0.14 11.7 0.1 1.5 8.3 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF1002) Ctr PF04145.15 BAM40962.1 - 0.0007 20.2 2.1 0.16 12.6 0.0 3.6 3 0 0 3 3 3 2 Ctr copper transporter family DUF5078 PF16877.5 BAM40963.1 - 0.035 14.6 0.5 11 6.5 0.1 3.7 3 0 0 3 3 3 0 Domain of unknown function (DUF5078) Ribosomal_L28e PF01778.17 BAM40965.1 - 4.1e-22 79.1 1.6 4.9e-22 78.8 1.6 1.1 1 0 0 1 1 1 1 Ribosomal L28e protein family Ribosomal_L35Ae PF01247.18 BAM40966.1 - 1.2e-44 150.3 2.0 1.6e-44 150.0 2.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L35Ae RimM PF01782.18 BAM40966.1 - 0.0018 18.4 0.7 0.45 10.8 0.1 2.2 2 0 0 2 2 2 2 RimM N-terminal domain Porin_3 PF01459.22 BAM40967.1 - 2.4e-09 37.1 0.3 1e-08 35.0 0.0 2.0 1 1 1 2 2 2 1 Eukaryotic porin cobW PF02492.19 BAM40968.1 - 8.3e-40 136.2 0.4 1.6e-39 135.3 0.4 1.4 1 1 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain CobW_C PF07683.14 BAM40968.1 - 0.00039 20.3 0.0 0.0018 18.2 0.0 2.1 2 1 0 2 2 2 1 Cobalamin synthesis protein cobW C-terminal domain MeaB PF03308.16 BAM40968.1 - 0.0081 15.2 3.0 1.5 7.8 0.1 2.6 3 0 0 3 3 3 2 Methylmalonyl Co-A mutase-associated GTPase MeaB NTPase_1 PF03266.15 BAM40968.1 - 0.013 15.5 0.6 0.026 14.4 0.6 1.5 1 0 0 1 1 1 0 NTPase AAA_22 PF13401.6 BAM40968.1 - 0.018 15.3 0.4 0.067 13.5 0.1 2.0 1 1 0 2 2 2 0 AAA domain CHASE5 PF17149.4 BAM40968.1 - 0.024 14.6 3.2 0.12 12.3 1.0 2.8 3 0 0 3 3 3 0 Periplasmic sensor domain found in signal transduction proteins AAA_16 PF13191.6 BAM40968.1 - 0.028 14.8 0.0 0.053 13.9 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_33 PF13671.6 BAM40968.1 - 0.033 14.4 0.5 0.56 10.4 0.1 2.2 2 0 0 2 2 2 0 AAA domain AAA PF00004.29 BAM40968.1 - 0.04 14.3 0.1 0.092 13.2 0.1 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MobB PF03205.14 BAM40968.1 - 0.047 13.6 0.6 0.17 11.8 0.6 2.0 1 1 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_30 PF13604.6 BAM40968.1 - 0.048 13.4 0.0 0.079 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 BAM40968.1 - 0.051 13.6 0.1 0.11 12.5 0.1 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Viral_helicase1 PF01443.18 BAM40968.1 - 0.067 12.9 0.3 0.18 11.6 0.1 1.8 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase NACHT PF05729.12 BAM40968.1 - 0.11 12.4 0.0 0.24 11.3 0.0 1.6 1 0 0 1 1 1 0 NACHT domain AAA_18 PF13238.6 BAM40968.1 - 0.16 12.5 1.1 0.65 10.5 0.1 2.3 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 BAM40968.1 - 4.2 7.8 8.2 0.72 10.3 0.3 2.8 3 0 0 3 3 3 0 AAA domain BOP1NT PF08145.12 BAM40969.1 - 1.3e-90 303.9 8.9 1.3e-90 303.9 8.9 2.3 2 0 0 2 2 2 1 BOP1NT (NUC169) domain DUF2205 PF10224.9 BAM40969.1 - 0.0019 18.2 3.0 0.0019 18.2 3.0 1.9 2 0 0 2 2 2 1 Short coiled-coil protein KASH_CCD PF14662.6 BAM40969.1 - 0.009 15.9 2.9 0.02 14.7 1.4 2.2 2 0 0 2 2 2 1 Coiled-coil region of CCDC155 or KASH NRBF2 PF08961.10 BAM40969.1 - 0.029 14.0 1.0 0.07 12.7 1.0 1.6 1 0 0 1 1 1 0 Nuclear receptor-binding factor 2, autophagy regulator bZIP_1 PF00170.21 BAM40969.1 - 0.86 9.8 8.1 0.34 11.0 3.8 2.4 1 1 1 2 2 2 0 bZIP transcription factor YabA PF06156.13 BAM40969.1 - 1.1 9.9 8.2 0.056 14.1 1.1 2.6 3 0 0 3 3 3 0 Initiation control protein YabA Clathrin_lg_ch PF01086.17 BAM40971.1 - 0.00037 20.6 9.8 0.00055 20.1 9.8 1.3 1 0 0 1 1 1 1 Clathrin light chain FixO PF02433.15 BAM40971.1 - 0.031 13.7 1.2 0.041 13.3 1.2 1.1 1 0 0 1 1 1 0 Cytochrome C oxidase, mono-heme subunit/FixO Zmiz1_N PF18028.1 BAM40971.1 - 0.11 12.8 2.8 0.76 10.1 2.8 2.2 1 1 0 1 1 1 0 Zmiz1 N-terminal tetratricopeptide repeat domain DUF4473 PF14747.6 BAM40971.1 - 0.11 13.0 2.3 0.28 11.8 0.6 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4473) Ydr279_N PF17745.1 BAM40972.1 - 7.6e-05 22.9 0.1 0.00019 21.7 0.1 1.7 1 0 0 1 1 1 1 Ydr279p protein triple barrel domain zf-SAP30 PF13866.6 BAM40972.1 - 0.029 14.5 0.2 0.13 12.4 0.1 2.1 1 1 1 2 2 2 0 SAP30 zinc-finger COX15-CtaA PF02628.15 BAM40973.1 - 2e-88 296.6 2.4 2.4e-88 296.3 2.4 1.1 1 0 0 1 1 1 1 Cytochrome oxidase assembly protein DUF5353 PF17304.2 BAM40973.1 - 0.12 12.1 4.6 1.3 8.8 0.3 3.4 3 0 0 3 3 3 0 Family of unknown function (DUF5353) Peptidase_M24 PF00557.24 BAM40974.1 - 8.8e-40 136.6 0.0 1.1e-39 136.3 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 MAM33 PF02330.16 BAM40975.1 - 9.2e-33 114.0 0.2 4.1e-32 111.9 0.2 1.8 1 1 0 1 1 1 1 Mitochondrial glycoprotein Lectin_like PF18560.1 BAM40975.1 - 0.083 13.0 0.1 0.34 11.1 0.0 1.9 2 0 0 2 2 2 0 Lectin like domain AAA_5 PF07728.14 BAM40976.1 - 2.6e-90 299.6 0.0 2.2e-21 76.3 0.0 7.0 6 0 0 6 6 6 6 AAA domain (dynein-related subfamily) AAA_3 PF07726.11 BAM40976.1 - 4.7e-24 84.7 0.0 1.1e-07 31.7 0.0 4.9 4 0 0 4 4 4 4 ATPase family associated with various cellular activities (AAA) Dynein_heavy PF03028.15 BAM40976.1 - 2.1e-20 73.0 0.0 4.6e-06 26.7 0.0 7.2 6 0 0 6 6 6 3 Dynein heavy chain region D6 P-loop domain AAA_7 PF12775.7 BAM40976.1 - 5.3e-18 65.2 2.9 6e-06 25.9 0.0 5.3 5 0 0 5 5 5 4 P-loop containing dynein motor region AAA PF00004.29 BAM40976.1 - 3.8e-17 63.0 0.1 0.0007 20.0 0.0 5.2 4 0 0 4 4 4 4 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 BAM40976.1 - 4.8e-16 59.6 0.0 0.0035 17.8 0.0 4.7 4 0 0 4 4 4 4 AAA ATPase domain AAA_22 PF13401.6 BAM40976.1 - 1.8e-13 51.0 0.0 0.0027 18.0 0.0 5.1 4 0 0 4 4 4 3 AAA domain AAA_6 PF12774.7 BAM40976.1 - 8.8e-12 44.6 0.1 0.0019 17.3 0.0 5.6 5 0 0 5 5 5 2 Hydrolytic ATP binding site of dynein motor region TsaE PF02367.17 BAM40976.1 - 9.2e-12 45.1 1.0 0.1 12.6 0.1 4.7 4 0 0 4 4 4 3 Threonylcarbamoyl adenosine biosynthesis protein TsaE Sigma54_activat PF00158.26 BAM40976.1 - 1.1e-10 41.4 0.0 0.2 11.3 0.0 4.9 4 0 0 4 4 4 3 Sigma-54 interaction domain AAA_lid_7 PF17867.1 BAM40976.1 - 2.6e-10 40.4 0.0 1.5e-07 31.6 0.1 3.6 2 0 0 2 2 2 1 Midasin AAA lid domain AAA_lid_5 PF17865.1 BAM40976.1 - 3.6e-10 39.9 1.7 1.9e-09 37.5 0.1 3.3 2 0 0 2 2 1 1 Midasin AAA lid domain Mg_chelatase PF01078.21 BAM40976.1 - 1.2e-09 37.9 0.1 0.014 14.8 0.0 5.9 5 1 0 5 5 5 2 Magnesium chelatase, subunit ChlI ABC_tran PF00005.27 BAM40976.1 - 4.4e-09 37.0 0.3 0.073 13.6 0.0 4.5 3 0 0 3 3 3 3 ABC transporter T2SSE PF00437.20 BAM40976.1 - 5.6e-09 35.4 0.3 0.073 12.1 0.0 4.0 4 0 0 4 4 4 3 Type II/IV secretion system protein Sigma54_activ_2 PF14532.6 BAM40976.1 - 2.3e-07 31.0 0.3 0.11 12.7 0.0 4.3 4 0 0 4 4 4 2 Sigma-54 interaction domain NACHT PF05729.12 BAM40976.1 - 2.4e-07 30.8 0.9 0.27 11.2 0.1 4.8 4 0 0 4 4 4 2 NACHT domain TniB PF05621.11 BAM40976.1 - 8.8e-07 28.5 0.0 0.42 10.0 0.0 3.7 3 0 0 3 3 3 2 Bacterial TniB protein IstB_IS21 PF01695.17 BAM40976.1 - 1.4e-06 28.2 0.0 1.8 8.3 0.0 4.5 4 0 0 4 4 4 2 IstB-like ATP binding protein AAA_33 PF13671.6 BAM40976.1 - 6.5e-06 26.4 0.0 6.6 6.9 0.0 5.1 4 0 0 4 4 4 0 AAA domain AAA_18 PF13238.6 BAM40976.1 - 9.4e-06 26.2 12.3 1.2 9.7 0.0 7.2 6 0 0 6 6 6 2 AAA domain Roc PF08477.13 BAM40976.1 - 2.6e-05 24.4 0.8 1.3 9.3 0.0 4.4 4 0 0 4 4 3 1 Ras of Complex, Roc, domain of DAPkinase AAA_30 PF13604.6 BAM40976.1 - 5.1e-05 23.1 0.0 0.66 9.7 0.0 4.2 4 0 0 4 4 4 1 AAA domain RuvB_N PF05496.12 BAM40976.1 - 7.3e-05 22.6 0.1 0.18 11.5 0.0 4.7 5 0 0 5 5 5 1 Holliday junction DNA helicase RuvB P-loop domain SRP54 PF00448.22 BAM40976.1 - 9.8e-05 22.1 1.5 2.4 7.7 0.1 3.7 3 0 0 3 3 3 2 SRP54-type protein, GTPase domain RNA_helicase PF00910.22 BAM40976.1 - 0.00014 22.2 9.3 4.9 7.6 0.0 5.7 5 0 0 5 5 4 1 RNA helicase PduV-EutP PF10662.9 BAM40976.1 - 0.00014 21.6 0.4 3.6 7.3 0.0 3.8 3 0 0 3 3 3 2 Ethanolamine utilisation - propanediol utilisation AAA_29 PF13555.6 BAM40976.1 - 0.00028 20.5 0.1 2 8.2 0.0 4.2 4 0 0 4 4 4 1 P-loop containing region of AAA domain NTPase_1 PF03266.15 BAM40976.1 - 0.00075 19.4 4.8 2.4 8.0 0.0 4.5 4 0 0 4 4 4 1 NTPase DEAD PF00270.29 BAM40976.1 - 0.0024 17.7 0.2 1.9 8.2 0.0 3.8 3 0 0 3 3 3 1 DEAD/DEAH box helicase AAA_25 PF13481.6 BAM40976.1 - 0.0027 17.3 0.0 7.5 6.1 0.0 3.7 4 0 0 4 4 4 0 AAA domain ATPase PF06745.13 BAM40976.1 - 0.0064 15.9 1.1 0.27 10.5 0.0 3.0 3 0 0 3 3 3 1 KaiC FtsK_SpoIIIE PF01580.18 BAM40976.1 - 0.027 13.9 0.8 9.6 5.5 0.0 3.5 3 0 0 3 3 3 0 FtsK/SpoIIIE family AAA_19 PF13245.6 BAM40976.1 - 0.097 13.0 7.0 19 5.6 0.0 5.0 6 0 0 6 6 3 0 AAA domain UPF0122 PF04297.14 BAM40977.1 - 0.017 15.3 0.0 0.033 14.4 0.0 1.4 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like DUF326 PF03860.16 BAM40979.1 - 0.057 13.4 3.4 0.14 12.2 3.4 1.6 1 0 0 1 1 1 0 Domain of Unknown Function (DUF326) TPR_1 PF00515.28 BAM40980.1 - 2.3e-56 185.4 43.3 2.5e-07 30.3 1.3 9.6 9 0 0 9 9 9 9 Tetratricopeptide repeat TPR_2 PF07719.17 BAM40980.1 - 3e-48 158.1 31.9 3.2e-07 29.9 0.0 9.6 9 0 0 9 9 9 9 Tetratricopeptide repeat TPR_8 PF13181.6 BAM40980.1 - 1.3e-31 106.2 35.5 0.001 19.1 0.7 9.9 9 0 0 9 9 9 8 Tetratricopeptide repeat TPR_11 PF13414.6 BAM40980.1 - 9.1e-27 92.5 27.5 1.2e-07 31.3 0.9 8.8 6 2 3 9 9 8 6 TPR repeat TPR_12 PF13424.6 BAM40980.1 - 2.1e-23 82.4 10.6 1.8e-08 34.5 0.1 7.3 4 3 2 6 6 6 5 Tetratricopeptide repeat STI1 PF17830.1 BAM40980.1 - 1.1e-19 70.1 7.7 1e-15 57.4 1.0 3.1 2 0 0 2 2 2 2 STI1 domain TPR_17 PF13431.6 BAM40980.1 - 3.2e-19 67.8 15.8 0.0026 18.0 0.4 7.8 7 0 0 7 7 6 5 Tetratricopeptide repeat TPR_19 PF14559.6 BAM40980.1 - 4.2e-18 65.6 17.5 1.1e-06 29.0 0.2 7.1 5 2 3 8 8 8 4 Tetratricopeptide repeat TPR_14 PF13428.6 BAM40980.1 - 1.2e-17 63.1 2.1 0.22 12.4 0.0 8.4 6 2 2 8 8 8 3 Tetratricopeptide repeat TPR_16 PF13432.6 BAM40980.1 - 6.2e-16 58.8 0.0 0.0021 18.6 0.1 6.2 5 1 1 6 6 6 3 Tetratricopeptide repeat TPR_7 PF13176.6 BAM40980.1 - 6.8e-11 41.4 11.8 0.0014 18.5 0.1 8.1 9 0 0 9 9 8 2 Tetratricopeptide repeat TPR_9 PF13371.6 BAM40980.1 - 7.2e-10 38.9 0.0 0.43 10.8 0.0 6.0 3 2 3 6 6 6 2 Tetratricopeptide repeat TPR_6 PF13174.6 BAM40980.1 - 3.4e-07 30.5 18.6 2.6 8.9 0.1 8.4 9 0 0 9 9 7 2 Tetratricopeptide repeat ANAPC3 PF12895.7 BAM40980.1 - 8.8e-07 29.1 23.8 0.00024 21.3 3.0 6.6 4 3 2 6 6 6 3 Anaphase-promoting complex, cyclosome, subunit 3 Fis1_TPR_C PF14853.6 BAM40980.1 - 5.6e-06 26.3 25.4 0.31 11.1 0.1 9.0 10 0 0 10 10 9 2 Fis1 C-terminal tetratricopeptide repeat TPR_10 PF13374.6 BAM40980.1 - 7.4e-06 25.7 8.5 7 6.7 0.0 7.3 8 0 0 8 8 8 0 Tetratricopeptide repeat SHNi-TPR PF10516.9 BAM40980.1 - 9.5e-05 21.8 8.6 5 6.7 0.0 6.4 7 0 0 7 7 7 1 SHNi-TPR TPR_20 PF14561.6 BAM40980.1 - 0.00049 20.4 0.9 1.5 9.2 0.0 4.5 3 1 0 3 3 3 1 Tetratricopeptide repeat DUF3856 PF12968.7 BAM40980.1 - 0.0014 18.7 7.2 2.2 8.4 0.1 5.1 3 2 0 4 4 4 1 Domain of Unknown Function (DUF3856) TPR_21 PF09976.9 BAM40980.1 - 0.0037 17.0 13.1 5.8 6.6 0.1 5.5 2 2 2 5 5 5 1 Tetratricopeptide repeat-like domain Coatomer_E PF04733.14 BAM40980.1 - 0.0046 16.4 8.4 0.28 10.6 2.5 3.8 2 1 2 4 4 4 2 Coatomer epsilon subunit COPI_C PF06957.11 BAM40980.1 - 0.014 14.2 4.6 0.22 10.3 0.0 2.7 3 0 0 3 3 3 0 Coatomer (COPI) alpha subunit C-terminus Alkyl_sulf_dimr PF14863.6 BAM40980.1 - 0.022 15.2 2.7 0.11 13.0 0.2 3.1 3 0 0 3 3 3 0 Alkyl sulfatase dimerisation SPO22 PF08631.10 BAM40980.1 - 0.031 13.8 2.9 3.8 6.9 0.3 3.6 3 0 0 3 3 3 0 Meiosis protein SPO22/ZIP4 like Flavodoxin_3 PF12641.7 BAM40980.1 - 0.049 13.3 6.0 1.9 8.2 0.1 4.2 5 0 0 5 5 4 0 Flavodoxin domain PPR PF01535.20 BAM40980.1 - 0.37 11.1 13.9 2.2 8.7 0.1 5.9 6 1 1 7 7 7 0 PPR repeat RPN7 PF10602.9 BAM40980.1 - 1 9.0 15.6 5.7 6.6 1.9 4.2 2 1 1 3 3 3 0 26S proteasome subunit RPN7 TOM20_plant PF06552.12 BAM40980.1 - 1.9 8.2 11.5 10 5.8 0.0 4.9 5 1 0 5 5 5 0 Plant specific mitochondrial import receptor subunit TOM20 TPR_3 PF07720.12 BAM40980.1 - 2 8.5 19.1 0.32 11.0 0.2 5.7 6 0 0 6 6 6 0 Tetratricopeptide repeat MIT PF04212.18 BAM40980.1 - 5.4 7.2 22.7 2.8 8.1 0.7 7.1 7 1 1 8 8 7 0 MIT (microtubule interacting and transport) domain TGT PF01702.18 BAM40981.1 - 5.2e-25 88.3 0.0 9.1e-25 87.5 0.0 1.4 1 1 0 1 1 1 1 Queuine tRNA-ribosyltransferase MRP-S25 PF13741.6 BAM40982.1 - 8.1e-05 22.3 0.2 0.15 11.6 0.0 2.1 2 0 0 2 2 2 2 Mitochondrial ribosomal protein S25 MRP-S23 PF10484.9 BAM40982.1 - 0.0002 21.6 1.0 0.0028 17.9 1.0 2.2 1 1 0 1 1 1 1 Mitochondrial ribosomal protein S23 Lipoprotein_X PF03305.13 BAM40982.1 - 0.03 14.1 0.1 0.037 13.8 0.1 1.2 1 0 0 1 1 1 0 Mycoplasma MG185/MG260 protein UpxZ PF06603.11 BAM40982.1 - 0.17 12.2 0.0 0.43 10.9 0.0 1.7 1 0 0 1 1 1 0 UpxZ family of transcription anti-terminator antagonists zf-MYND PF01753.18 BAM40983.1 - 9.4e-05 22.4 3.7 0.00016 21.7 1.7 2.4 2 0 0 2 2 2 1 MYND finger zf-Mss51 PF13824.6 BAM40983.1 - 0.00015 21.8 0.8 0.00064 19.8 0.8 2.1 1 0 0 1 1 1 1 Zinc-finger of mitochondrial splicing suppressor 51 zf-C6H2 PF15801.5 BAM40983.1 - 0.0099 16.2 3.5 0.051 13.9 3.5 2.2 1 0 0 1 1 1 1 zf-MYND-like zinc finger, mRNA-binding AIG1 PF04548.16 BAM40983.1 - 0.051 12.9 0.0 0.083 12.2 0.0 1.3 1 0 0 1 1 1 0 AIG1 family zf-RING_7 PF02591.15 BAM40983.1 - 0.098 12.9 0.0 0.33 11.2 0.0 1.9 1 0 0 1 1 1 0 C4-type zinc ribbon domain FAINT PF04385.15 BAM40984.1 - 0.001 19.0 4.9 0.001 19.0 4.9 1.8 2 0 0 2 2 2 1 Domain of unknown function, DUF529 Cmc1 PF08583.10 BAM40986.1 - 3.5e-07 30.1 7.6 3.7e-07 30.1 6.0 1.9 1 1 0 1 1 1 1 Cytochrome c oxidase biogenesis protein Cmc1 like NuA4 PF09340.10 BAM40986.1 - 3.2e-06 26.9 0.1 3.2e-06 26.9 0.1 2.6 2 1 0 2 2 2 1 Histone acetyltransferase subunit NuA4 NDUF_B7 PF05676.13 BAM40986.1 - 0.062 13.0 2.8 0.14 11.9 2.8 1.5 1 0 0 1 1 1 0 NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) CX9C PF16860.5 BAM40986.1 - 0.73 9.9 8.9 0.042 13.9 3.2 1.9 2 0 0 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, MMR_HSR1 PF01926.23 BAM40987.1 - 2.9e-18 66.0 0.0 7.6e-18 64.7 0.0 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase YchF-GTPase_C PF06071.13 BAM40987.1 - 5.1e-16 58.6 1.9 2.6e-10 40.3 0.0 2.9 2 1 1 3 3 3 2 Protein of unknown function (DUF933) FeoB_N PF02421.18 BAM40987.1 - 1.7e-05 24.4 0.3 3.7e-05 23.3 0.0 1.7 2 0 0 2 2 2 1 Ferrous iron transport protein B AAA PF00004.29 BAM40987.1 - 0.02 15.3 0.2 0.069 13.6 0.0 2.0 3 0 0 3 3 3 0 ATPase family associated with various cellular activities (AAA) Dynamin_N PF00350.23 BAM40987.1 - 0.095 12.7 0.4 13 5.8 0.0 3.2 2 1 1 3 3 3 0 Dynamin family Cwf_Cwc_15 PF04889.12 BAM40988.1 - 7.4e-42 143.8 23.6 6.2e-39 134.2 23.6 2.0 1 1 0 1 1 1 1 Cwf15/Cwc15 cell cycle control protein AAA_23 PF13476.6 BAM40988.1 - 0.071 13.6 15.2 0.098 13.2 15.2 1.2 1 0 0 1 1 1 0 AAA domain MFAP1 PF06991.11 BAM40988.1 - 0.12 12.2 20.4 0.18 11.7 20.4 1.3 1 0 0 1 1 1 0 Microfibril-associated/Pre-mRNA processing RTX PF02382.15 BAM40988.1 - 0.26 10.9 6.7 0.33 10.6 6.7 1.1 1 0 0 1 1 1 0 N-terminal domain in RTX protein SecD-TM1 PF13721.6 BAM40988.1 - 1.3 9.5 3.3 9.4 6.8 0.3 2.3 2 0 0 2 2 2 0 SecD export protein N-terminal TM region FYVE_2 PF02318.16 BAM40988.1 - 2.5 8.3 9.9 0.11 12.7 2.5 2.2 2 1 0 2 2 2 0 FYVE-type zinc finger BING4CT PF08149.11 BAM40989.1 - 2.3e-33 113.8 0.0 1.7e-31 107.9 0.0 3.1 3 0 0 3 3 3 1 BING4CT (NUC141) domain WD40 PF00400.32 BAM40989.1 - 0.00024 21.8 1.5 0.35 11.8 0.4 4.6 5 0 0 5 5 5 1 WD domain, G-beta repeat WD40_like PF17005.5 BAM40989.1 - 0.00024 20.5 0.1 0.023 14.1 0.1 2.4 2 0 0 2 2 2 2 WD40-like domain DNA_pol_E_B PF04042.16 BAM40990.1 - 3e-05 23.5 0.0 6.5e-05 22.4 0.0 1.5 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B ADP_PFK_GK PF04587.15 BAM40990.1 - 0.04 12.5 0.0 0.054 12.1 0.0 1.1 1 0 0 1 1 1 0 ADP-specific Phosphofructokinase/Glucokinase conserved region DNA_pol_E_B PF04042.16 BAM40991.1 - 1.3e-07 31.2 0.0 1.6e-07 30.9 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase alpha/epsilon subunit B SMK-1 PF04802.15 BAM40992.1 - 4.2e-24 85.5 9.8 4.2e-24 85.5 9.8 1.9 2 0 0 2 2 2 1 Component of IIS longevity pathway SMK-1 CotJB PF12652.7 BAM40992.1 - 0.51 10.6 3.5 4.9 7.5 0.2 2.6 2 0 0 2 2 2 0 CotJB protein BD_b_sandwich PF18820.1 BAM40994.1 - 0.11 12.5 0.1 0.13 12.2 0.1 1.1 1 0 0 1 1 1 0 Bdellovibrio Beta-sandwich CECR6_TMEM121 PF14997.6 BAM40995.1 - 5.9e-18 65.4 5.8 5.9e-18 65.4 5.8 3.4 2 1 0 3 3 3 1 CECR6/TMEM121 family CSD PF00313.22 BAM40996.1 - 3.6e-23 81.2 0.1 4.8e-23 80.8 0.1 1.2 1 0 0 1 1 1 1 'Cold-shock' DNA-binding domain OB_RNB PF08206.11 BAM40996.1 - 0.00085 19.0 0.1 0.0025 17.5 0.1 1.8 2 0 0 2 2 2 1 Ribonuclease B OB domain A2M PF00207.22 BAM40996.1 - 0.19 11.6 0.0 0.29 11.0 0.0 1.2 1 0 0 1 1 1 0 Alpha-2-macroglobulin family ATP-synt_ab PF00006.25 BAM40997.1 - 7.1e-72 241.5 0.0 9.8e-72 241.0 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_C PF00306.27 BAM40997.1 - 1.9e-44 151.0 0.3 3.1e-44 150.3 0.3 1.3 1 0 0 1 1 1 1 ATP synthase alpha/beta chain, C terminal domain ATP-synt_ab_N PF02874.23 BAM40997.1 - 1e-14 54.8 1.6 2.7e-14 53.4 1.6 1.8 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 BAM40997.1 - 0.0024 18.0 0.6 0.0053 16.9 0.6 1.6 1 0 0 1 1 1 1 HAS barrel domain HTH_IclR PF09339.10 BAM40997.1 - 0.11 12.3 0.0 1.4 8.7 0.0 2.4 2 0 0 2 2 2 0 IclR helix-turn-helix domain Terpene_synth_C PF03936.16 BAM40998.1 - 0.031 13.6 0.0 0.036 13.4 0.0 1.1 1 0 0 1 1 1 0 Terpene synthase family, metal binding domain Sec1 PF00995.23 BAM40999.1 - 9.7e-86 289.2 21.7 1.1e-85 289.0 21.7 1.0 1 0 0 1 1 1 1 Sec1 family TFIID-18kDa PF02269.16 BAM40999.1 - 0.069 13.2 0.0 0.3 11.2 0.0 2.1 2 0 0 2 2 2 0 Transcription initiation factor IID, 18kD subunit Ribosomal_S30 PF04758.14 BAM41000.1 - 1e-25 89.7 9.5 1.1e-25 89.5 9.5 1.0 1 0 0 1 1 1 1 Ribosomal protein S30 PIG-P PF08510.12 BAM41001.1 - 0.027 14.4 0.0 0.027 14.4 0.0 1.5 2 0 0 2 2 2 0 PIG-P NPFF PF15085.6 BAM41001.1 - 0.057 13.8 0.1 0.092 13.1 0.1 1.3 1 0 0 1 1 1 0 Neuropeptide FF GTA_holin_3TM PF11351.8 BAM41001.1 - 0.16 12.5 0.0 5.5 7.6 0.0 2.2 2 0 0 2 2 2 0 Holin of 3TMs, for gene-transfer release RFC1 PF08519.12 BAM41002.1 - 1.4e-34 119.6 0.8 1.4e-34 119.6 0.8 2.6 2 0 0 2 2 2 1 Replication factor RFC1 C terminal domain BRCT PF00533.26 BAM41002.1 - 3.2e-10 40.2 0.3 3.4e-09 37.0 0.0 2.7 2 0 0 2 2 2 1 BRCA1 C Terminus (BRCT) domain AAA PF00004.29 BAM41002.1 - 7.8e-10 39.3 0.0 2.6e-09 37.6 0.0 2.0 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 BAM41002.1 - 8.9e-06 25.7 0.0 0.00011 22.2 0.0 2.9 1 1 0 1 1 1 1 Rad17 P-loop domain AAA_22 PF13401.6 BAM41002.1 - 0.0005 20.3 0.2 0.0049 17.1 0.0 2.7 2 1 0 2 2 2 1 AAA domain RuvB_N PF05496.12 BAM41002.1 - 0.0012 18.6 0.0 0.0029 17.4 0.0 1.7 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_assoc_2 PF16193.5 BAM41002.1 - 0.0034 17.7 0.0 0.019 15.3 0.0 2.5 1 0 0 1 1 1 1 AAA C-terminal domain AAA_16 PF13191.6 BAM41002.1 - 0.006 17.0 0.1 0.023 15.1 0.1 2.0 1 1 0 1 1 1 1 AAA ATPase domain Sigma54_activ_2 PF14532.6 BAM41002.1 - 0.013 15.7 0.1 0.11 12.7 0.0 2.4 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_18 PF13238.6 BAM41002.1 - 0.059 13.9 2.1 0.59 10.7 0.0 3.4 2 0 0 2 2 2 0 AAA domain PGA2 PF07543.12 BAM41003.1 - 0.065 13.2 0.0 0.12 12.3 0.0 1.5 1 0 0 1 1 1 0 Protein trafficking PGA2 DUF4149 PF13664.6 BAM41003.1 - 0.7 10.2 10.6 0.45 10.9 5.2 2.7 3 1 0 3 3 3 0 Domain of unknown function (DUF4149) WD40 PF00400.32 BAM41005.1 - 2.8e-06 28.0 0.2 0.075 13.9 0.1 4.1 5 0 0 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM41005.1 - 2.1e-05 24.7 0.8 0.00061 20.0 0.1 2.5 2 0 0 2 2 2 1 Anaphase-promoting complex subunit 4 WD40 domain Nup160 PF11715.8 BAM41005.1 - 0.021 13.5 0.1 0.026 13.2 0.1 1.2 1 0 0 1 1 1 0 Nucleoporin Nup120/160 Fcf1 PF04900.12 BAM41006.1 - 0.0044 17.4 0.0 0.0075 16.7 0.0 1.4 1 0 0 1 1 1 1 Fcf1 PIN_9 PF18477.1 BAM41006.1 - 0.065 13.6 0.0 0.083 13.2 0.0 1.1 1 0 0 1 1 1 0 PIN like domain rRNA_processing PF08524.11 BAM41008.1 - 3.6e-06 27.1 30.2 0.00015 21.9 30.2 2.1 1 1 0 1 1 1 1 rRNA processing ATP-synt_E PF05680.12 BAM41008.1 - 1.1 9.7 12.6 5 7.5 5.4 2.3 2 0 0 2 2 2 0 ATP synthase E chain EMG1 PF03587.14 BAM41009.1 - 8.6e-35 120.2 0.1 1.3e-34 119.6 0.1 1.3 1 1 0 1 1 1 1 EMG1/NEP1 methyltransferase DMAP_binding PF06464.11 BAM41009.1 - 0.053 14.3 0.1 0.13 13.1 0.1 1.6 1 0 0 1 1 1 0 DMAP1-binding Domain Staphylcoagulse PF04022.12 BAM41010.1 - 0.012 15.2 0.5 0.024 14.1 0.5 1.6 1 0 0 1 1 1 0 Staphylocoagulase repeat Med31 PF05669.12 BAM41011.1 - 4.2e-29 100.4 6.1 4.2e-29 100.4 6.1 3.2 3 0 0 3 3 3 1 SOH1 MyTH4 PF00784.17 BAM41011.1 - 0.08 13.4 0.1 0.63 10.6 0.0 2.5 3 0 0 3 3 3 0 MyTH4 domain Xpo1 PF08389.12 BAM41011.1 - 0.29 11.2 4.1 0.32 11.1 0.1 3.2 3 0 0 3 3 3 0 Exportin 1-like protein ubiquitin PF00240.23 BAM41012.1 - 3.4e-07 29.9 0.3 8.4e-07 28.6 0.3 1.6 1 1 0 1 1 1 1 Ubiquitin family Ubiquitin_2 PF14560.6 BAM41012.1 - 0.00024 21.5 0.2 0.0012 19.3 0.2 1.8 1 1 0 1 1 1 1 Ubiquitin-like domain Ubiquitin_4 PF18036.1 BAM41012.1 - 0.025 14.6 0.3 0.25 11.4 0.2 1.9 1 1 1 2 2 2 0 Ubiquitin-like domain DHHC PF01529.20 BAM41013.1 - 1.9e-31 108.9 17.0 1.9e-31 108.9 17.0 2.2 2 0 0 2 2 2 1 DHHC palmitoyltransferase Bac_export_2 PF01312.19 BAM41013.1 - 0.46 9.7 2.7 0.37 10.0 0.3 1.7 2 0 0 2 2 2 0 FlhB HrpN YscU SpaS Family 7tm_7 PF08395.12 BAM41013.1 - 0.69 9.1 19.7 0.24 10.6 8.0 2.3 2 0 0 2 2 2 0 7tm Chemosensory receptor DUF2254 PF10011.9 BAM41013.1 - 1.2 7.9 3.6 2.5 6.8 3.6 1.4 1 0 0 1 1 1 0 Predicted membrane protein (DUF2254) Bromo_TP PF07524.13 BAM41014.1 - 0.0027 17.7 0.0 0.0044 17.0 0.0 1.3 1 0 0 1 1 1 1 Bromodomain associated DnaJ PF00226.31 BAM41015.1 - 5.2e-20 71.3 1.5 6.1e-12 45.5 0.3 2.8 2 0 0 2 2 2 2 DnaJ domain DUF3395 PF11875.8 BAM41015.1 - 8.1e-10 38.8 0.0 1.8e-09 37.7 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF3395) IPK PF03770.16 BAM41016.1 - 2.2e-18 66.8 2.0 4.8e-18 65.7 2.0 1.5 1 1 0 1 1 1 1 Inositol polyphosphate kinase Rib_5-P_isom_A PF06026.14 BAM41017.1 - 7.2e-43 146.2 0.1 1e-42 145.7 0.1 1.2 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 BAM41017.1 - 0.0029 17.5 0.1 0.17 11.8 0.0 2.2 2 0 0 2 2 2 1 DeoR C terminal sensor domain HEM4 PF02602.15 BAM41017.1 - 0.0042 16.5 0.0 0.0069 15.8 0.0 1.3 1 0 0 1 1 1 1 Uroporphyrinogen-III synthase HemD Sugar-bind PF04198.13 BAM41017.1 - 0.093 11.9 0.1 0.14 11.3 0.1 1.2 1 0 0 1 1 1 0 Putative sugar-binding domain DUF3213 PF11491.8 BAM41017.1 - 0.11 12.7 0.4 0.46 10.7 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3213) Synaptobrevin PF00957.21 BAM41018.1 - 0.0037 17.0 7.8 0.004 16.9 0.6 2.4 1 1 1 2 2 2 1 Synaptobrevin DUF2408 PF10303.9 BAM41018.1 - 0.0053 17.3 5.2 0.007 16.9 5.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2408) CorA PF01544.18 BAM41018.1 - 0.043 13.1 2.0 0.1 11.9 2.0 1.6 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein Syntaxin_2 PF14523.6 BAM41018.1 - 0.34 11.3 9.5 0.13 12.7 4.3 2.1 1 1 1 2 2 2 0 Syntaxin-like protein Sec20 PF03908.13 BAM41018.1 - 2.7 8.0 6.6 1.4 8.8 0.3 2.8 2 1 0 3 3 3 0 Sec20 DUF1690 PF07956.11 BAM41018.1 - 9 6.7 10.8 43 4.5 10.8 2.0 1 1 0 1 1 1 0 Protein of Unknown function (DUF1690) E3_UFM1_ligase PF09743.9 BAM41019.1 - 3.3e-67 227.0 3.7 8.6e-67 225.6 3.7 1.7 1 0 0 1 1 1 1 E3 UFM1-protein ligase 1 baeRF_family12 PF18856.1 BAM41019.1 - 0.03 14.9 0.0 0.14 12.8 0.0 2.1 2 0 0 2 2 2 0 Bacterial archaeo-eukaryotic release factor family 12 EnY2 PF10163.9 BAM41019.1 - 0.034 14.5 0.8 2.6 8.5 0.1 3.6 3 0 0 3 3 3 0 Transcription factor e(y)2 CS PF04969.16 BAM41020.1 - 2.6e-08 34.8 2.4 4.1e-08 34.1 2.4 1.3 1 0 0 1 1 1 1 CS domain SGS PF05002.15 BAM41020.1 - 0.00077 19.5 0.5 0.0017 18.4 0.5 1.5 1 0 0 1 1 1 1 SGS domain Siah-Interact_N PF09032.11 BAM41020.1 - 0.018 15.3 0.1 0.077 13.3 0.0 2.0 2 0 0 2 2 2 0 Siah interacting protein, N terminal CTP_transf_like PF01467.26 BAM41021.1 - 1.6e-11 44.6 0.0 2.7e-11 43.8 0.0 1.4 1 1 0 1 1 1 1 Cytidylyltransferase-like DUF3889 PF13028.6 BAM41021.1 - 0.0048 16.8 0.3 0.0087 16.0 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF3889) FAINT PF04385.15 BAM41022.1 - 0.0015 18.5 0.0 0.0034 17.4 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function, DUF529 Med6 PF04934.14 BAM41023.1 - 0.076 12.8 0.0 0.22 11.3 0.0 1.6 2 0 0 2 2 2 0 MED6 mediator sub complex component FAINT PF04385.15 BAM41025.1 - 0.011 15.7 1.4 0.031 14.3 1.4 1.8 1 0 0 1 1 1 0 Domain of unknown function, DUF529 BACK PF07707.15 BAM41029.1 - 0.0002 21.4 0.0 0.00068 19.7 0.0 1.9 1 1 0 1 1 1 1 BTB And C-terminal Kelch BTB PF00651.31 BAM41029.1 - 0.0018 18.4 0.0 0.0053 17.0 0.0 1.8 1 0 0 1 1 1 1 BTB/POZ domain Csd3_N PF18059.1 BAM41030.1 - 0.12 12.9 1.8 0.22 12.1 0.3 2.2 2 0 0 2 2 2 0 Csd3 N-terminal Sde2_N_Ubi PF13019.6 BAM41031.1 - 4.6e-15 55.8 0.4 7.9e-15 55.1 0.2 1.5 1 1 0 1 1 1 1 Silencing defective 2 N-terminal ubiquitin domain YfhD PF14151.6 BAM41031.1 - 0.19 11.9 2.7 8.1 6.7 1.4 2.6 2 0 0 2 2 2 0 YfhD-like protein PRELI PF04707.14 BAM41032.1 - 7e-17 61.7 0.0 8.5e-17 61.4 0.0 1.1 1 0 0 1 1 1 1 PRELI-like family Helicase_C_2 PF13307.6 BAM41033.1 - 8.6e-44 149.7 0.3 2.2e-43 148.4 0.1 1.9 2 0 0 2 2 2 1 Helicase C-terminal domain DEAD_2 PF06733.15 BAM41033.1 - 1.8e-35 122.1 4.8 4.6e-35 120.8 4.8 1.7 1 0 0 1 1 1 1 DEAD_2 HBB PF06777.11 BAM41033.1 - 1.4e-05 24.8 0.1 4.7e-05 23.1 0.1 1.9 1 0 0 1 1 1 1 Helical and beta-bridge domain ResIII PF04851.15 BAM41033.1 - 0.0021 18.1 0.0 0.4 10.7 0.0 3.0 2 1 0 3 3 3 1 Type III restriction enzyme, res subunit SNF2_N PF00176.23 BAM41033.1 - 0.0093 14.7 0.0 0.024 13.4 0.0 1.6 1 1 0 1 1 1 1 SNF2 family N-terminal domain Leptin PF02024.15 BAM41033.1 - 0.019 14.8 0.0 0.074 12.8 0.0 2.0 1 0 0 1 1 1 0 Leptin DEAD PF00270.29 BAM41033.1 - 0.026 14.3 0.0 0.22 11.3 0.0 2.4 3 0 0 3 3 3 0 DEAD/DEAH box helicase Arg_decarbox_C PF17944.1 BAM41033.1 - 0.088 13.4 0.1 9.4 6.9 0.0 3.1 2 0 0 2 2 2 0 Arginine decarboxylase C-terminal helical extension SAC3_GANP PF03399.16 BAM41034.1 - 4.3e-08 32.9 12.1 4.3e-08 32.9 12.1 4.2 3 1 0 3 3 3 2 SAC3/GANP family DUF4144 PF13642.6 BAM41034.1 - 0.029 14.9 1.8 0.081 13.5 0.3 2.4 2 0 0 2 2 2 0 protein structure with unknown function Prenyltrans PF00432.21 BAM41035.1 - 1.5e-41 139.8 11.9 4.5e-10 39.1 0.1 5.8 6 0 0 6 6 6 5 Prenyltransferase and squalene oxidase repeat SQHop_cyclase_N PF13249.6 BAM41035.1 - 6.4e-06 25.5 0.0 0.34 10.0 0.0 4.0 1 1 4 5 5 5 4 Squalene-hopene cyclase N-terminal domain SQHop_cyclase_C PF13243.6 BAM41035.1 - 0.00062 19.0 0.0 0.018 14.1 0.0 2.7 1 1 2 3 3 3 1 Squalene-hopene cyclase C-terminal domain TED_complement PF07678.14 BAM41035.1 - 0.0053 15.8 0.0 0.098 11.7 0.0 2.4 2 1 0 2 2 2 1 A-macroglobulin TED domain APG6_N PF17675.1 BAM41036.1 - 9.2 6.8 15.7 3.5 8.2 0.0 3.3 3 0 0 3 3 3 0 Apg6 coiled-coil region MMR_HSR1 PF01926.23 BAM41037.1 - 7.7e-46 154.9 0.4 2.2e-22 79.3 0.0 2.3 2 0 0 2 2 2 2 50S ribosome-binding GTPase KH_dom-like PF14714.6 BAM41037.1 - 7.7e-25 87.0 0.2 1.9e-24 85.7 0.2 1.7 1 0 0 1 1 1 1 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FeoB_N PF02421.18 BAM41037.1 - 2.6e-20 72.5 0.0 1.6e-09 37.5 0.0 2.2 2 0 0 2 2 2 2 Ferrous iron transport protein B GTP_EFTU PF00009.27 BAM41037.1 - 1.3e-14 54.2 0.5 1.1e-07 31.6 0.2 4.3 2 2 0 2 2 2 2 Elongation factor Tu GTP binding domain AIG1 PF04548.16 BAM41037.1 - 2.9e-11 43.1 0.7 0.00011 21.6 0.0 2.5 2 1 0 2 2 2 2 AIG1 family Dynamin_N PF00350.23 BAM41037.1 - 3.6e-11 43.4 3.7 0.029 14.4 0.2 4.4 2 2 2 4 4 4 3 Dynamin family SRPRB PF09439.10 BAM41037.1 - 6.7e-10 38.7 2.4 0.00058 19.3 0.0 2.7 2 1 0 2 2 2 2 Signal recognition particle receptor beta subunit Ras PF00071.22 BAM41037.1 - 8e-10 38.5 0.3 1.8e-05 24.4 0.1 2.6 2 1 0 2 2 2 2 Ras family Roc PF08477.13 BAM41037.1 - 1e-07 32.2 0.4 0.016 15.4 0.1 2.9 2 1 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 BAM41037.1 - 9.7e-06 25.1 1.1 0.05 13.0 0.2 2.7 2 1 0 2 2 2 2 ADP-ribosylation factor family RsgA_GTPase PF03193.16 BAM41037.1 - 1e-05 25.5 1.5 1.1 9.1 0.0 4.0 3 1 1 4 4 4 2 RsgA GTPase AAA_22 PF13401.6 BAM41037.1 - 0.001 19.3 0.0 0.012 15.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain cobW PF02492.19 BAM41037.1 - 0.017 14.7 0.6 0.28 10.8 0.0 2.7 2 1 1 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain ABC_tran PF00005.27 BAM41037.1 - 0.026 15.0 0.6 3.8 8.0 0.0 2.6 2 1 0 2 2 2 0 ABC transporter AAA_16 PF13191.6 BAM41037.1 - 0.085 13.2 0.0 2.5 8.4 0.0 2.9 1 1 1 2 2 2 0 AAA ATPase domain AAA_18 PF13238.6 BAM41037.1 - 0.15 12.6 0.5 1.6 9.3 0.0 2.8 3 0 0 3 3 2 0 AAA domain zf-CSL PF05207.13 BAM41038.1 - 2.8e-17 62.2 2.2 3.7e-17 61.8 2.2 1.2 1 0 0 1 1 1 1 CSL zinc finger YGGT PF02325.17 BAM41039.1 - 0.00011 22.6 3.2 0.00025 21.4 3.2 1.6 1 0 0 1 1 1 1 YGGT family ESCRT-II PF05871.12 BAM41040.1 - 5e-13 49.5 0.0 1.6e-12 47.8 0.0 1.8 1 1 0 1 1 1 1 ESCRT-II complex subunit DDRGK PF09756.9 BAM41041.1 - 6.3e-50 169.4 29.0 6.3e-50 169.4 29.0 1.5 1 1 1 2 2 2 1 DDRGK domain NAM-associated PF14303.6 BAM41041.1 - 0.0012 19.6 15.0 0.0019 18.9 15.0 1.2 1 0 0 1 1 1 1 No apical meristem-associated C-terminal domain SID-1_RNA_chan PF13965.6 BAM41041.1 - 0.0087 14.5 0.7 0.01 14.3 0.7 1.1 1 0 0 1 1 1 1 dsRNA-gated channel SID-1 eIF3_subunit PF08597.10 BAM41041.1 - 0.44 10.4 25.0 0.64 9.9 25.0 1.2 1 0 0 1 1 1 0 Translation initiation factor eIF3 subunit MMR1 PF08505.10 BAM41041.1 - 0.54 10.5 12.4 0.74 10.1 12.4 1.1 1 0 0 1 1 1 0 Mitochondrial Myo2 receptor-related protein Cytochrom_C PF00034.21 BAM41041.1 - 1.4 10.1 10.2 1.7e+03 0.2 10.2 2.8 1 1 0 1 1 1 0 Cytochrome c Atg14 PF10186.9 BAM41041.1 - 8.5 5.4 15.5 12 4.8 15.5 1.3 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 CLN3 PF02487.17 BAM41041.1 - 10 5.1 8.3 2.4 7.1 0.0 2.1 1 1 1 2 2 2 0 CLN3 protein PolyA_pol PF01743.20 BAM41042.1 - 2.8e-26 92.4 0.0 8.1e-26 90.9 0.0 1.8 1 0 0 1 1 1 1 Poly A polymerase head domain PolyA_pol_RNAbd PF12627.7 BAM41042.1 - 0.00022 20.9 0.0 0.00063 19.5 0.0 1.8 1 0 0 1 1 1 1 Probable RNA and SrmB- binding site of polymerase A ExbD PF02472.16 BAM41042.1 - 0.049 13.8 0.1 2.6 8.2 0.0 2.9 3 0 0 3 3 3 0 Biopolymer transport protein ExbD/TolR DHHC PF01529.20 BAM41045.1 - 3e-31 108.3 17.1 3e-31 108.3 17.1 2.8 2 2 1 3 3 3 1 DHHC palmitoyltransferase DUF2304 PF10066.9 BAM41045.1 - 6 7.1 16.8 3.5 7.9 0.2 3.6 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2304) CRPA PF05745.11 BAM41045.1 - 8.2 6.4 6.2 0.88 9.6 0.2 2.3 3 0 0 3 3 3 0 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) Pkinase PF00069.25 BAM41046.1 - 1.8e-58 198.0 0.0 4.6e-58 196.7 0.0 1.8 1 0 0 1 1 1 1 Protein kinase domain cNMP_binding PF00027.29 BAM41046.1 - 1.1e-57 192.1 1.5 2e-18 66.3 0.0 4.6 4 0 0 4 4 4 4 Cyclic nucleotide-binding domain Pkinase_Tyr PF07714.17 BAM41046.1 - 9.2e-27 93.9 0.0 1.9e-26 92.9 0.0 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 BAM41046.1 - 1.3e-07 31.2 0.0 2.7e-07 30.2 0.0 1.4 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 BAM41046.1 - 0.012 15.0 0.0 0.025 13.9 0.0 1.5 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 BAM41046.1 - 0.13 12.1 0.0 0.25 11.3 0.0 1.3 1 0 0 1 1 1 0 Phosphotransferase enzyme family Cupin_2 PF07883.11 BAM41046.1 - 0.5 10.1 6.7 7.8 6.3 0.1 4.0 4 0 0 4 4 4 0 Cupin domain Zip PF02535.22 BAM41048.1 - 1.7e-18 66.9 13.9 5.4e-18 65.3 13.9 1.6 1 1 0 1 1 1 1 ZIP Zinc transporter Microcin PF03526.13 BAM41048.1 - 0.15 11.9 1.5 0.18 11.6 0.2 1.8 2 0 0 2 2 2 0 Colicin E1 (microcin) immunity protein DUF1129 PF06570.11 BAM41048.1 - 0.24 10.8 2.4 0.56 9.7 2.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1129) Ribosomal_L3 PF00297.22 BAM41049.1 - 2e-12 46.8 4.6 3.9e-12 45.8 2.6 2.1 1 1 1 2 2 2 1 Ribosomal protein L3 RRM_1 PF00076.22 BAM41050.1 - 9.8e-29 99.0 2.5 1.1e-14 54.0 0.0 3.0 2 1 1 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 BAM41050.1 - 5.8e-12 45.6 3.9 0.00016 21.7 0.0 3.4 2 1 1 3 3 3 2 RNA recognition motif Nup35_RRM_2 PF14605.6 BAM41050.1 - 1.3e-05 25.1 0.1 0.061 13.3 0.0 2.6 2 0 0 2 2 2 2 Nup53/35/40-type RNA recognition motif RL PF17797.1 BAM41050.1 - 0.0099 15.8 0.1 5.9 6.9 0.0 2.5 2 0 0 2 2 2 2 RL domain RNA_bind PF08675.11 BAM41050.1 - 0.034 14.2 0.3 0.19 11.8 0.0 2.3 2 1 0 2 2 2 0 RNA binding domain DUF4651 PF15513.6 BAM41050.1 - 0.076 12.8 0.0 0.34 10.7 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4651) LSM PF01423.22 BAM41051.1 - 2.7e-16 59.0 1.3 2.7e-16 59.0 0.3 1.5 2 0 0 2 2 2 1 LSM domain SM-ATX PF14438.6 BAM41051.1 - 0.0009 19.3 0.1 0.0016 18.5 0.0 1.5 1 1 0 1 1 1 1 Ataxin 2 SM domain DUF3201 PF11447.8 BAM41052.1 - 0.046 13.3 0.3 0.26 10.8 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3201) Telomerase_RBD PF12009.8 BAM41054.1 - 5.2e-25 88.1 0.9 5.2e-25 88.1 0.9 2.4 3 0 0 3 3 3 1 Telomerase ribonucleoprotein complex - RNA binding domain RVT_1 PF00078.27 BAM41054.1 - 5.7e-13 48.9 0.1 2.4e-07 30.5 0.0 2.6 2 0 0 2 2 2 2 Reverse transcriptase (RNA-dependent DNA polymerase) Macro PF01661.21 BAM41055.1 - 0.00029 20.9 0.0 0.00053 20.0 0.0 1.4 1 0 0 1 1 1 1 Macro domain Ribosomal_L19 PF01245.20 BAM41055.1 - 1.7 8.6 4.6 3.9 7.4 2.8 2.4 1 1 1 2 2 2 0 Ribosomal protein L19 DUF4218 PF13960.6 BAM41057.1 - 0.038 13.6 0.0 0.26 10.9 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4218) zf-ribbon_3 PF13248.6 BAM41057.1 - 0.054 12.9 2.8 0.29 10.6 2.8 2.1 1 1 0 1 1 1 0 zinc-ribbon domain Pro_3_hydrox_C PF05373.11 BAM41057.1 - 0.067 13.3 0.8 0.17 12.0 0.1 1.9 2 0 0 2 2 2 0 L-proline 3-hydroxylase, C-terminal Zn_Tnp_IS91 PF14319.6 BAM41057.1 - 0.15 12.1 1.9 0.16 12.0 0.6 1.8 2 0 0 2 2 2 0 Transposase zinc-binding domain zf-C3HC4_2 PF13923.6 BAM41057.1 - 2 8.4 7.7 0.56 10.1 3.9 2.0 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) C1_1 PF00130.22 BAM41057.1 - 2 8.4 6.4 2.1 8.3 2.0 2.1 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) ADD_ATRX PF17981.1 BAM41057.1 - 6.5 6.7 7.9 13 5.7 3.7 2.4 1 1 1 2 2 2 0 Cysteine Rich ADD domain TTRAP PF14203.6 BAM41058.1 - 0.04 13.9 3.5 0.27 11.3 0.9 2.8 2 0 0 2 2 2 0 Putative tranposon-transfer assisting protein c-SKI_SMAD_bind PF08782.10 BAM41058.1 - 0.057 13.6 0.8 0.76 10.1 0.1 2.5 2 0 0 2 2 2 0 c-SKI Smad4 binding domain RhoGEF PF00621.20 BAM41058.1 - 0.39 10.9 6.5 0.4 10.9 0.1 2.9 2 1 0 2 2 2 0 RhoGEF domain DUF4116 PF13475.6 BAM41058.1 - 1.2 8.9 5.6 1.5 8.6 0.2 3.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4116) Sdh5 PF03937.16 BAM41059.1 - 5.1e-05 23.1 0.9 9.8e-05 22.3 0.9 1.4 1 0 0 1 1 1 1 Flavinator of succinate dehydrogenase AP2 PF00847.20 BAM41060.1 - 5.4e-28 97.0 12.2 3.9e-14 52.6 1.5 2.4 2 0 0 2 2 2 2 AP2 domain DUF1610 PF07754.11 BAM41062.1 - 0.00015 21.7 1.6 0.081 12.9 0.4 3.0 3 0 0 3 3 3 2 Domain of unknown function (DUF1610) Rubredoxin PF00301.20 BAM41062.1 - 0.0019 18.1 2.2 0.2 11.7 2.2 2.4 1 1 0 1 1 1 1 Rubredoxin Neurokinin_B PF03823.14 BAM41062.1 - 0.012 15.6 0.0 0.024 14.6 0.0 1.5 1 0 0 1 1 1 0 Neurokinin B Nudix_N_2 PF14803.6 BAM41062.1 - 0.013 15.4 1.5 1.1 9.2 0.1 2.4 2 0 0 2 2 2 0 Nudix N-terminal Zn_Tnp_IS1595 PF12760.7 BAM41062.1 - 0.019 14.9 1.5 0.41 10.7 0.2 2.4 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zf-Mss51 PF13824.6 BAM41062.1 - 0.024 14.7 3.1 5.9 7.1 3.1 2.6 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF35_N PF12172.8 BAM41062.1 - 0.054 13.4 5.0 0.21 11.5 0.2 2.4 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc_ribbon_10 PF10058.9 BAM41062.1 - 0.15 11.8 2.1 7.5 6.4 0.1 2.4 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein CpXC PF14353.6 BAM41062.1 - 0.18 11.9 2.6 12 6.0 0.4 3.0 2 1 1 3 3 3 0 CpXC protein zf-ribbon_3 PF13248.6 BAM41062.1 - 0.18 11.2 0.5 0.18 11.2 0.5 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zf-IS66 PF13005.7 BAM41062.1 - 0.23 11.9 1.6 9.8 6.7 0.1 2.3 2 0 0 2 2 2 0 zinc-finger binding domain of transposase IS66 zinc_ribbon_2 PF13240.6 BAM41062.1 - 0.23 11.2 3.7 0.61 9.9 0.4 2.6 2 0 0 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 BAM41062.1 - 0.24 10.9 3.2 1.6 8.3 0.2 2.5 3 0 0 3 3 3 0 TFIIB zinc-binding Zn_ribbon_SprT PF17283.2 BAM41062.1 - 0.32 10.9 4.0 7.4 6.6 0.5 2.6 2 0 0 2 2 2 0 SprT-like zinc ribbon domain Zn-ribbon_8 PF09723.10 BAM41062.1 - 0.53 10.4 6.3 0.45 10.7 4.0 2.1 2 1 0 2 2 2 0 Zinc ribbon domain DUF2752 PF10825.8 BAM41062.1 - 3.2 7.9 6.2 31 4.7 0.4 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF2752) zf-C2H2 PF00096.26 BAM41062.1 - 3.2 8.4 5.8 34 5.2 0.2 3.1 3 0 0 3 3 2 0 Zinc finger, C2H2 type zf-RING_7 PF02591.15 BAM41062.1 - 6.3 7.1 7.8 11 6.3 3.9 2.7 2 1 0 2 2 2 0 C4-type zinc ribbon domain Ribonuc_red_lgC PF02867.15 BAM41063.1 - 1.1e-186 621.5 0.0 1.6e-186 620.9 0.0 1.3 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 BAM41063.1 - 2.6e-23 81.8 0.1 1.1e-22 79.8 0.0 2.2 2 0 0 2 2 2 1 Ribonucleotide reductase, all-alpha domain ATP-cone PF03477.16 BAM41063.1 - 7.8e-11 42.4 0.0 2e-10 41.1 0.0 1.8 1 0 0 1 1 1 1 ATP cone domain CLP_protease PF00574.23 BAM41064.1 - 3e-33 115.3 0.0 6.9e-33 114.0 0.0 1.6 1 0 0 1 1 1 1 Clp protease Glycos_trans_3N PF02885.17 BAM41064.1 - 0.031 14.1 0.0 0.44 10.4 0.0 2.7 3 0 0 3 3 3 0 Glycosyl transferase family, helical bundle domain EF_assoc_1 PF08355.12 BAM41064.1 - 0.23 11.1 0.3 4.1 7.1 0.0 3.0 3 1 0 3 3 3 0 EF hand associated FAST_1 PF06743.15 BAM41064.1 - 1.5 8.9 10.6 8.4 6.4 0.4 4.9 5 0 0 5 5 5 0 FAST kinase-like protein, subdomain 1 DUF5409 PF17421.2 BAM41064.1 - 6.7 7.5 8.1 5.6 7.8 0.2 4.1 4 0 0 4 4 4 0 Family of unknown function (DUF5409) HIT PF01230.23 BAM41065.1 - 2.4e-22 79.5 0.1 9.7e-22 77.5 0.0 1.7 2 0 0 2 2 2 1 HIT domain DcpS_C PF11969.8 BAM41065.1 - 4.1e-05 24.0 0.0 6.6e-05 23.4 0.0 1.3 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding RCC1 PF00415.18 BAM41066.1 - 1.2e-107 352.4 40.5 1.4e-12 48.0 0.3 15.3 14 1 0 14 14 14 13 Regulator of chromosome condensation (RCC1) repeat DEAD PF00270.29 BAM41066.1 - 9.2e-49 165.6 0.0 2.9e-48 163.9 0.0 2.0 1 0 0 1 1 1 1 DEAD/DEAH box helicase RCC1_2 PF13540.6 BAM41066.1 - 5.6e-45 150.3 89.9 9.5e-08 31.6 1.4 14.6 15 1 0 15 15 15 10 Regulator of chromosome condensation (RCC1) repeat Helicase_C PF00271.31 BAM41066.1 - 9.2e-28 96.8 1.1 1.7e-26 92.7 0.0 3.0 3 0 0 3 3 3 1 Helicase conserved C-terminal domain NPAT_C PF15712.5 BAM41066.1 - 3.5 6.2 25.3 7.6 5.1 25.3 1.5 1 0 0 1 1 1 0 NPAT C terminus TPT PF03151.16 BAM41067.1 - 2.4e-80 270.0 16.4 2.8e-80 269.8 16.4 1.0 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 BAM41067.1 - 8.5e-08 32.5 22.2 0.0011 19.1 10.8 2.4 2 0 0 2 2 2 2 EamA-like transporter family UAA PF08449.11 BAM41067.1 - 0.00013 21.3 10.7 0.00019 20.8 10.7 1.3 1 0 0 1 1 1 1 UAA transporter family DUF2183 PF09949.9 BAM41068.1 - 1.1e-05 25.6 0.0 6.2e-05 23.3 0.0 2.2 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2183) IL15 PF02372.15 BAM41068.1 - 0.27 11.3 0.1 0.27 11.3 0.1 2.0 3 0 0 3 3 3 0 Interleukin 15 Ank_2 PF12796.7 BAM41069.1 - 9.1e-21 74.2 1.5 9e-12 45.4 0.2 3.3 2 1 1 3 3 3 2 Ankyrin repeats (3 copies) Ank PF00023.30 BAM41069.1 - 5.1e-19 67.8 2.0 5.2e-06 26.7 0.0 4.1 3 0 0 3 3 3 3 Ankyrin repeat Ank_4 PF13637.6 BAM41069.1 - 8e-18 64.6 0.2 4.3e-12 46.3 0.0 3.0 1 1 1 2 2 2 2 Ankyrin repeats (many copies) Ank_5 PF13857.6 BAM41069.1 - 2.5e-16 59.5 0.3 9.2e-06 25.8 0.5 3.8 1 1 2 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 BAM41069.1 - 2.2e-15 55.2 0.2 0.00019 21.6 0.0 5.2 5 0 0 5 5 5 3 Ankyrin repeat SET PF00856.28 BAM41069.1 - 0.015 15.7 0.0 0.034 14.6 0.0 1.7 1 0 0 1 1 1 0 SET domain Pyr_redox_2 PF07992.14 BAM41070.1 - 7.3e-43 146.9 0.0 9.6e-43 146.5 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 BAM41070.1 - 3.1e-09 37.2 0.0 4e-07 30.5 0.0 2.7 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase LIF_OSM PF01291.17 BAM41070.1 - 0.14 12.3 0.0 0.26 11.4 0.0 1.5 1 0 0 1 1 1 0 LIF / OSM family Pyr_redox_3 PF13738.6 BAM41070.1 - 0.14 11.3 0.0 21 4.2 0.0 2.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase UQ_con PF00179.26 BAM41071.1 - 1.4e-42 144.7 0.0 1.6e-42 144.5 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme HNH_repeat PF18780.1 BAM41071.1 - 0.097 12.5 0.1 0.19 11.5 0.1 1.4 1 0 0 1 1 1 0 Homing endonuclease repeat RWD PF05773.22 BAM41071.1 - 0.14 12.5 0.5 0.27 11.6 0.4 1.7 1 1 0 1 1 1 0 RWD domain MFS_1 PF07690.16 BAM41072.1 - 1.5e-17 63.6 14.4 1.5e-17 63.6 14.4 1.7 1 1 0 1 1 1 1 Major Facilitator Superfamily Sld5 PF05916.11 BAM41073.1 - 8.6e-07 29.4 0.0 3.9e-06 27.3 0.0 1.9 1 1 1 2 2 2 1 GINS complex protein MFS_1 PF07690.16 BAM41074.1 - 2e-16 59.9 9.2 2e-16 59.9 9.2 1.9 2 1 0 2 2 2 1 Major Facilitator Superfamily MFS_1 PF07690.16 BAM41075.1 - 7.8e-17 61.2 22.4 1e-16 60.9 22.4 1.2 1 0 0 1 1 1 1 Major Facilitator Superfamily PDR_CDR PF06422.12 BAM41076.1 - 4 7.4 5.9 0.77 9.7 1.4 2.1 2 0 0 2 2 2 0 CDR ABC transporter Elf1 PF05129.13 BAM41077.1 - 5.6e-23 80.8 2.0 9.8e-23 80.0 2.0 1.4 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like Ribosomal_S17e PF00833.18 BAM41077.1 - 0.011 15.6 1.0 0.027 14.4 1.0 1.6 1 0 0 1 1 1 0 Ribosomal S17 Vps36-NZF-N PF16988.5 BAM41077.1 - 0.016 14.6 0.1 0.037 13.4 0.1 1.6 1 0 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain TFIIS_C PF01096.18 BAM41077.1 - 0.032 14.1 1.1 0.13 12.2 1.1 2.0 1 1 0 1 1 1 0 Transcription factor S-II (TFIIS) Zn-ribbon_8 PF09723.10 BAM41077.1 - 0.13 12.4 1.2 0.76 9.9 1.3 2.2 1 1 1 2 2 2 0 Zinc ribbon domain CorA PF01544.18 BAM41078.1 - 1.8e-05 24.2 4.5 6.9e-05 22.3 4.5 2.0 1 1 0 1 1 1 1 CorA-like Mg2+ transporter protein DUF5082 PF16888.5 BAM41078.1 - 0.62 10.3 6.6 0.19 12.0 2.8 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) DNA_ligase_A_M PF01068.21 BAM41079.1 - 6.1e-58 195.8 0.4 1.6e-57 194.4 0.0 1.9 2 0 0 2 2 2 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 BAM41079.1 - 2.1e-29 103.1 0.1 3.4e-29 102.4 0.1 1.3 1 0 0 1 1 1 1 DNA ligase N terminus DNA_ligase_A_C PF04679.15 BAM41079.1 - 7.8e-26 90.6 0.0 1.6e-25 89.6 0.0 1.5 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region DNA_ligase_OB_2 PF14743.6 BAM41079.1 - 0.033 14.2 0.2 5.3 7.1 0.1 2.8 2 0 0 2 2 2 0 DNA ligase OB-like domain PUB PF09409.10 BAM41080.1 - 4.8e-10 39.2 1.6 9.6e-10 38.3 1.6 1.5 1 0 0 1 1 1 1 PUB domain ubiquitin PF00240.23 BAM41080.1 - 0.24 11.2 1.6 23 4.8 0.0 3.2 2 1 0 3 3 3 0 Ubiquitin family RLL PF10036.9 BAM41081.1 - 7.6e-12 45.6 5.5 1.5e-11 44.7 5.5 1.4 1 1 0 1 1 1 1 RNA transcription, translation and transport factor protein SET PF00856.28 BAM41082.1 - 1.4e-05 25.6 0.0 8.3e-05 23.0 0.0 2.3 2 0 0 2 2 2 1 SET domain CUT PF02376.15 BAM41082.1 - 0.1 12.8 0.1 0.7 10.1 0.0 2.2 2 0 0 2 2 2 0 CUT domain TFIIE_beta PF02186.15 BAM41085.1 - 0.019 15.2 2.0 0.057 13.7 0.3 2.9 2 0 0 2 2 2 0 TFIIE beta subunit core domain G6PD_C PF02781.16 BAM41086.1 - 2.3e-62 210.8 0.0 3.7e-62 210.2 0.0 1.2 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, C-terminal domain G6PD_N PF00479.22 BAM41086.1 - 1.4e-36 126.8 0.0 2.8e-36 125.8 0.0 1.5 1 0 0 1 1 1 1 Glucose-6-phosphate dehydrogenase, NAD binding domain Glucosamine_iso PF01182.20 BAM41086.1 - 9.6e-36 123.8 0.0 1.7e-35 122.9 0.0 1.4 1 0 0 1 1 1 1 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VMA21 PF09446.10 BAM41087.1 - 0.0032 17.6 6.1 0.0043 17.1 6.1 1.2 1 0 0 1 1 1 1 VMA21-like domain Phage_holin_3_6 PF07332.11 BAM41087.1 - 0.012 15.6 1.4 0.013 15.5 1.4 1.1 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III DUF410 PF04190.13 BAM41088.1 - 5.2e-37 128.0 0.9 6.9e-37 127.6 0.9 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF410) SNAP PF14938.6 BAM41088.1 - 0.0015 18.0 1.3 0.0022 17.5 0.3 1.7 2 1 0 2 2 2 1 Soluble NSF attachment protein, SNAP DUF3175 PF11373.8 BAM41088.1 - 0.011 15.9 0.7 0.029 14.5 0.1 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3175) Styelin PF17562.2 BAM41088.1 - 0.039 14.3 0.1 0.15 12.4 0.1 2.0 1 0 0 1 1 1 0 Styelin R3H-assoc PF13902.6 BAM41088.1 - 0.13 12.7 0.0 0.3 11.4 0.0 1.7 1 0 0 1 1 1 0 R3H-associated N-terminal domain TPR_17 PF13431.6 BAM41088.1 - 0.28 11.7 5.4 18 6.0 0.0 3.5 3 0 0 3 3 3 0 Tetratricopeptide repeat Beta-Casp PF10996.8 BAM41089.1 - 6.2e-26 90.8 0.0 1.6e-25 89.6 0.0 1.7 1 0 0 1 1 1 1 Beta-Casp domain RMMBL PF07521.12 BAM41089.1 - 1.9e-18 66.1 0.0 4.3e-18 65.0 0.0 1.6 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain CPSF73-100_C PF11718.8 BAM41089.1 - 5.3e-18 65.4 6.8 9.2e-18 64.6 6.8 1.4 1 0 0 1 1 1 1 Pre-mRNA 3'-end-processing endonuclease polyadenylation factor C-term Lactamase_B_6 PF16661.5 BAM41089.1 - 3.5e-15 55.9 0.0 8.8e-15 54.6 0.0 1.6 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B PF00753.27 BAM41089.1 - 7.4e-14 52.2 0.0 4.2e-13 49.8 0.0 2.0 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 BAM41089.1 - 4.7e-05 23.0 0.0 0.11 12.0 0.0 3.0 3 0 0 3 3 3 2 Beta-lactamase superfamily domain Beta_lactamase3 PF17030.5 BAM41089.1 - 8.1e-05 22.0 1.0 0.00059 19.1 0.0 2.4 2 1 0 2 2 2 1 Putative beta-lactamase-like family Lactamase_B_3 PF13483.6 BAM41089.1 - 0.01 15.8 0.0 0.043 13.7 0.0 2.0 1 1 0 1 1 1 0 Beta-lactamase superfamily domain Acetyltransf_8 PF13523.6 BAM41089.1 - 0.2 11.3 0.1 14 5.3 0.0 2.3 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain DUF4328 PF14219.6 BAM41090.1 - 0.034 13.7 1.0 0.046 13.3 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4328) Claudin_2 PF13903.6 BAM41090.1 - 3.5 7.3 12.4 0.71 9.6 0.3 2.6 2 1 0 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction Hist_deacetyl PF00850.19 BAM41091.1 - 6.1e-73 246.0 0.3 1.5e-72 244.7 0.0 1.8 2 0 0 2 2 2 1 Histone deacetylase domain Ank_4 PF13637.6 BAM41091.1 - 5.1e-06 26.9 0.3 0.016 15.8 0.0 3.0 2 0 0 2 2 2 2 Ankyrin repeats (many copies) Ank_2 PF12796.7 BAM41091.1 - 0.0008 19.9 0.0 0.51 11.0 0.0 2.9 2 0 0 2 2 2 2 Ankyrin repeats (3 copies) Ank_3 PF13606.6 BAM41091.1 - 0.015 15.8 0.2 6.7 7.6 0.0 3.4 2 0 0 2 2 2 0 Ankyrin repeat Vps23_core PF09454.10 BAM41092.1 - 0.0071 16.3 0.4 0.1 12.6 0.0 2.8 3 0 0 3 3 3 1 Vps23 core domain Vps51 PF08700.11 BAM41093.1 - 8.4e-15 54.6 4.3 2.7e-14 53.0 0.6 2.9 2 0 0 2 2 2 1 Vps51/Vps67 Pox_RNA_Pol_22 PF05273.13 BAM41093.1 - 0.0099 15.7 0.2 0.031 14.0 0.0 2.0 2 0 0 2 2 2 1 Poxvirus RNA polymerase 22 kDa subunit COG5 PF10392.9 BAM41093.1 - 0.012 15.8 5.1 0.015 15.5 1.2 2.9 2 0 0 2 2 2 0 Golgi transport complex subunit 5 DLP_helical PF18709.1 BAM41093.1 - 0.056 12.6 1.0 7.1 5.7 0.3 2.7 2 1 0 2 2 2 0 Dynamin-like helical domain Methyltr_RsmB-F PF01189.17 BAM41094.1 - 7.9e-24 84.4 0.0 2.9e-23 82.5 0.0 1.9 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_31 PF13847.6 BAM41094.1 - 4.1e-07 29.9 0.0 1.3e-06 28.2 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 BAM41094.1 - 0.00049 20.8 0.1 0.0076 16.9 0.0 2.7 3 0 0 3 3 3 1 Methyltransferase domain Methyltransf_23 PF13489.6 BAM41094.1 - 0.057 13.3 0.1 1 9.2 0.0 2.7 2 1 0 2 2 2 0 Methyltransferase domain UCH PF00443.29 BAM41096.1 - 3.9e-44 151.1 4.6 1e-43 149.7 4.6 1.8 1 0 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 BAM41096.1 - 5.8e-15 55.7 0.5 5.8e-15 55.7 0.5 2.9 3 1 0 3 3 3 1 Ubiquitin carboxyl-terminal hydrolase USP7_C2 PF14533.6 BAM41096.1 - 3.1e-07 30.3 0.1 1.4e-06 28.2 0.0 2.1 2 0 0 2 2 2 1 Ubiquitin-specific protease C-terminal DNA_mis_repair PF01119.19 BAM41097.1 - 5.9e-25 87.3 0.0 1.3e-24 86.2 0.0 1.6 1 0 0 1 1 1 1 DNA mismatch repair protein, C-terminal domain MutL_C PF08676.11 BAM41097.1 - 3.8e-18 65.7 0.1 1.4e-15 57.4 0.1 3.4 2 1 0 2 2 2 1 MutL C terminal dimerisation domain HATPase_c_3 PF13589.6 BAM41097.1 - 1.5e-09 37.8 0.0 3.3e-08 33.5 0.0 2.5 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 BAM41097.1 - 2e-05 25.0 0.0 5.7e-05 23.6 0.0 1.8 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DUF3348 PF11828.8 BAM41097.1 - 0.04 13.6 0.7 0.063 13.0 0.7 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3348) AAA PF00004.29 BAM41098.1 - 2.6e-85 283.5 0.0 1.1e-43 148.8 0.1 2.6 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 BAM41098.1 - 2e-28 97.9 4.1 2.8e-13 49.4 0.0 3.2 3 0 0 3 3 2 2 AAA+ lid domain RuvB_N PF05496.12 BAM41098.1 - 2.7e-15 56.5 0.0 1.7e-06 27.9 0.0 2.7 2 1 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 BAM41098.1 - 2e-14 53.8 0.1 8.5e-08 32.3 0.1 3.3 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_2 PF07724.14 BAM41098.1 - 1.8e-13 51.0 0.0 6.4e-06 26.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 BAM41098.1 - 2.3e-13 50.9 0.2 4.7e-05 23.8 0.0 3.9 3 2 0 3 3 2 2 AAA ATPase domain AAA_33 PF13671.6 BAM41098.1 - 6.5e-12 45.8 0.0 2.2e-06 27.9 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_14 PF13173.6 BAM41098.1 - 6e-11 42.5 0.0 0.0001 22.4 0.0 2.7 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 BAM41098.1 - 7.3e-10 39.2 0.3 0.0068 16.7 0.1 4.1 2 2 1 3 3 2 2 AAA domain TIP49 PF06068.13 BAM41098.1 - 2.7e-08 33.4 0.2 0.0056 15.9 0.0 2.8 3 0 0 3 3 2 2 TIP49 P-loop domain AAA_18 PF13238.6 BAM41098.1 - 5.4e-08 33.4 0.0 0.012 16.1 0.0 2.9 2 0 0 2 2 2 2 AAA domain Bac_DnaA PF00308.18 BAM41098.1 - 5.6e-08 32.9 1.1 0.0003 20.7 0.0 3.1 3 0 0 3 3 3 2 Bacterial dnaA protein Viral_helicase1 PF01443.18 BAM41098.1 - 5.8e-08 32.8 0.0 0.0035 17.1 0.0 2.4 2 0 0 2 2 2 2 Viral (Superfamily 1) RNA helicase RNA_helicase PF00910.22 BAM41098.1 - 6.3e-08 33.0 0.0 0.014 15.8 0.0 2.8 2 0 0 2 2 2 2 RNA helicase IstB_IS21 PF01695.17 BAM41098.1 - 3.4e-07 30.2 0.0 0.019 14.7 0.0 2.4 2 0 0 2 2 2 2 IstB-like ATP binding protein Vps4_C PF09336.10 BAM41098.1 - 4.3e-07 29.8 0.1 8.4e-05 22.5 0.0 2.9 2 0 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_3 PF07726.11 BAM41098.1 - 7.4e-07 29.1 0.0 0.0042 17.0 0.0 2.8 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 BAM41098.1 - 1.2e-06 28.9 0.0 0.027 14.7 0.0 2.6 2 0 0 2 2 2 2 AAA domain Mg_chelatase PF01078.21 BAM41098.1 - 1.3e-06 28.0 0.2 0.029 13.8 0.0 2.7 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI NB-ARC PF00931.22 BAM41098.1 - 2.9e-06 26.7 0.1 0.38 9.9 0.0 3.3 3 0 0 3 3 3 2 NB-ARC domain NACHT PF05729.12 BAM41098.1 - 4.1e-06 26.8 0.0 0.18 11.7 0.0 3.0 2 2 1 3 3 3 2 NACHT domain ABC_tran PF00005.27 BAM41098.1 - 6.8e-06 26.6 0.5 0.23 12.0 0.1 2.9 3 1 0 3 3 2 2 ABC transporter AAA_17 PF13207.6 BAM41098.1 - 9.1e-06 26.1 0.1 0.23 11.9 0.0 3.1 3 0 0 3 3 2 2 AAA domain Rad17 PF03215.15 BAM41098.1 - 1e-05 25.6 0.0 0.07 13.0 0.0 2.5 2 0 0 2 2 2 2 Rad17 P-loop domain CDC48_N PF02359.18 BAM41098.1 - 1.1e-05 25.5 1.9 2.6e-05 24.3 1.9 1.6 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain Zeta_toxin PF06414.12 BAM41098.1 - 1.4e-05 24.4 0.0 0.069 12.4 0.0 2.6 2 0 0 2 2 2 2 Zeta toxin Sigma54_activat PF00158.26 BAM41098.1 - 1.6e-05 24.7 0.4 0.56 9.9 0.2 3.7 2 2 0 2 2 2 2 Sigma-54 interaction domain Sigma54_activ_2 PF14532.6 BAM41098.1 - 1.8e-05 24.9 0.0 0.3 11.2 0.0 2.6 2 0 0 2 2 2 2 Sigma-54 interaction domain TsaE PF02367.17 BAM41098.1 - 2.1e-05 24.5 0.0 0.27 11.2 0.0 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_7 PF12775.7 BAM41098.1 - 2.9e-05 23.7 0.0 0.091 12.3 0.0 2.8 3 0 0 3 3 2 2 P-loop containing dynein motor region ATPase_2 PF01637.18 BAM41098.1 - 4.6e-05 23.4 5.5 0.48 10.3 0.0 4.2 3 2 1 4 4 4 2 ATPase domain predominantly from Archaea AAA_25 PF13481.6 BAM41098.1 - 6.6e-05 22.6 0.5 1.4 8.5 0.0 4.2 4 0 0 4 4 4 1 AAA domain Parvo_NS1 PF01057.17 BAM41098.1 - 6.9e-05 22.1 0.2 0.026 13.6 0.0 2.3 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 ATPase PF06745.13 BAM41098.1 - 0.00035 20.0 0.5 0.91 8.8 0.1 3.1 2 1 0 2 2 2 2 KaiC AAA_11 PF13086.6 BAM41098.1 - 0.00037 20.4 0.0 0.84 9.4 0.0 2.9 3 0 0 3 3 2 2 AAA domain AAA_24 PF13479.6 BAM41098.1 - 0.0011 18.7 0.1 1.5 8.5 0.0 3.1 3 0 0 3 3 3 1 AAA domain ResIII PF04851.15 BAM41098.1 - 0.0011 19.0 0.0 0.47 10.4 0.0 2.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit PhoH PF02562.16 BAM41098.1 - 0.002 17.6 0.1 1.1 8.7 0.0 2.5 2 0 0 2 2 2 1 PhoH-like protein DUF2075 PF09848.9 BAM41098.1 - 0.0027 17.0 0.0 0.77 8.9 0.0 2.3 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) NTPase_1 PF03266.15 BAM41098.1 - 0.0036 17.2 0.2 16 5.4 0.0 3.8 2 1 1 3 3 3 0 NTPase Hydin_ADK PF17213.3 BAM41098.1 - 0.0043 17.4 0.8 1.2 9.4 0.1 3.3 3 0 0 3 3 3 1 Hydin Adenylate kinase-like domain Cytidylate_kin2 PF13189.6 BAM41098.1 - 0.0061 16.7 0.0 2.4 8.2 0.0 2.6 2 0 0 2 2 2 1 Cytidylate kinase-like family AAA_19 PF13245.6 BAM41098.1 - 0.0075 16.6 0.7 6.3 7.1 0.2 3.0 3 1 0 4 4 2 0 AAA domain DUF815 PF05673.13 BAM41098.1 - 0.01 15.0 0.0 0.75 8.9 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF815) DAP3 PF10236.9 BAM41098.1 - 0.014 14.6 0.3 6.8 5.8 0.0 3.0 3 1 1 4 4 4 0 Mitochondrial ribosomal death-associated protein 3 ADK PF00406.22 BAM41098.1 - 0.016 15.4 1.1 51 3.9 0.0 3.7 3 1 0 3 3 3 0 Adenylate kinase SKI PF01202.22 BAM41098.1 - 0.017 15.2 0.0 9.7 6.3 0.0 2.6 2 0 0 2 2 2 0 Shikimate kinase Cytidylate_kin PF02224.18 BAM41098.1 - 0.02 14.6 0.1 3.4 7.4 0.0 2.6 2 0 0 2 2 2 0 Cytidylate kinase AAA_30 PF13604.6 BAM41098.1 - 0.023 14.4 0.1 4.5 7.0 0.0 2.4 2 0 0 2 2 2 0 AAA domain PduV-EutP PF10662.9 BAM41098.1 - 0.054 13.2 0.0 7.1 6.4 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation tRNA_lig_kinase PF08303.11 BAM41098.1 - 0.055 13.6 1.9 0.16 12.0 0.0 2.7 3 0 0 3 3 3 0 tRNA ligase kinase domain KAP_NTPase PF07693.14 BAM41098.1 - 0.066 12.5 0.0 4.3 6.5 0.0 2.5 2 1 0 2 2 2 0 KAP family P-loop domain Molydop_binding PF01568.21 BAM41098.1 - 0.083 12.9 0.1 0.2 11.7 0.1 1.5 1 0 0 1 1 1 0 Molydopterin dinucleotide binding domain Torsin PF06309.11 BAM41098.1 - 0.098 12.8 0.0 4.6 7.4 0.0 2.8 2 0 0 2 2 2 0 Torsin AAA_23 PF13476.6 BAM41098.1 - 0.24 11.9 8.2 23 5.4 0.1 4.2 4 1 0 4 4 4 0 AAA domain tRNA-synt_2 PF00152.20 BAM41099.1 - 3.4e-71 239.9 0.0 4.4e-71 239.5 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 BAM41099.1 - 4.7e-08 32.9 0.0 8.5e-08 32.1 0.0 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 BAM41099.1 - 0.0097 15.4 0.2 2 7.8 0.0 2.2 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) tRNA_anti_2 PF13742.6 BAM41099.1 - 0.031 14.5 0.1 0.08 13.2 0.1 1.6 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain Ribosomal_L34e PF01199.18 BAM41100.1 - 2.5e-39 133.5 8.1 2.5e-39 133.5 8.1 2.2 2 0 0 2 2 2 1 Ribosomal protein L34e zf-3CxxC_2 PF17180.4 BAM41100.1 - 0.94 10.3 6.9 0.91 10.3 4.9 2.1 2 1 0 2 2 2 0 Zinc-binding domain FBA_2 PF07735.17 BAM41101.1 - 0.068 13.3 0.4 0.25 11.5 0.4 2.0 1 0 0 1 1 1 0 F-box associated SecIII_SopE_N PF05364.14 BAM41102.1 - 0.029 14.4 1.0 0.22 11.6 0.1 2.2 2 0 0 2 2 2 0 Salmonella type III secretion SopE effector N-terminus XPA_C PF05181.12 BAM41102.1 - 0.084 12.8 0.4 5.8 7.0 0.0 2.6 3 0 0 3 3 3 0 XPA protein C-terminus Keratin_assoc PF09775.9 BAM41103.1 - 0.06 13.0 4.0 0.095 12.4 2.4 2.2 1 1 1 2 2 2 0 Keratinocyte-associated protein 2 Beta-Casp PF10996.8 BAM41105.1 - 6.1 7.2 6.0 9.8 6.5 0.3 3.5 2 2 0 2 2 2 0 Beta-Casp domain DUF2730 PF10805.8 BAM41106.1 - 0.0043 17.1 1.9 0.01 15.9 1.9 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF2730) FlxA PF14282.6 BAM41106.1 - 0.034 14.1 0.5 0.059 13.4 0.5 1.3 1 0 0 1 1 1 0 FlxA-like protein CCDC-167 PF15188.6 BAM41106.1 - 0.43 10.9 6.4 1.1 9.7 6.4 1.7 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 167 DivIC PF04977.15 BAM41106.1 - 5.4 6.9 7.0 6.2 6.7 0.3 2.5 1 1 1 2 2 2 0 Septum formation initiator Ssl1 PF04056.14 BAM41107.1 - 6.4e-37 127.2 0.0 1.1e-36 126.4 0.0 1.3 1 0 0 1 1 1 1 Ssl1-like VWA_2 PF13519.6 BAM41107.1 - 4.2e-09 37.0 0.0 7.5e-09 36.2 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain C1_4 PF07975.12 BAM41107.1 - 1.2e-05 25.4 10.2 1.2e-05 25.4 10.2 3.2 3 1 0 3 3 3 1 TFIIH C1-like domain VWA PF00092.28 BAM41107.1 - 6.2e-05 23.3 0.0 0.0001 22.6 0.0 1.3 1 0 0 1 1 1 1 von Willebrand factor type A domain zf-U1 PF06220.12 BAM41107.1 - 0.07 12.9 2.2 0.18 11.6 2.2 1.7 1 0 0 1 1 1 0 U1 zinc finger HNH PF01844.23 BAM41107.1 - 2 8.6 10.8 1.4 9.1 0.1 3.4 3 0 0 3 3 3 0 HNH endonuclease Clathrin PF00637.20 BAM41108.1 - 4.1e-119 393.1 86.9 3.3e-22 78.9 1.6 9.4 8 1 0 8 8 8 7 Region in Clathrin and VPS Clathrin_H_link PF13838.6 BAM41108.1 - 8e-19 67.3 0.3 1.1e-17 63.7 0.2 3.2 2 0 0 2 2 2 1 Clathrin-H-link Clathrin_propel PF01394.20 BAM41108.1 - 0.0011 19.2 0.1 3.5 8.1 0.0 3.0 2 0 0 2 2 2 2 Clathrin propeller repeat TPR_14 PF13428.6 BAM41108.1 - 0.0085 16.8 0.6 0.85 10.6 0.0 4.9 6 0 0 6 6 6 1 Tetratricopeptide repeat TPR_7 PF13176.6 BAM41108.1 - 0.04 13.9 7.4 24 5.2 0.0 6.2 7 0 0 7 7 7 0 Tetratricopeptide repeat TPR_19 PF14559.6 BAM41108.1 - 0.051 14.1 0.2 29 5.3 0.0 4.6 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_1 PF00515.28 BAM41108.1 - 0.45 10.4 11.6 7.8 6.5 0.2 5.7 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_2 PF07719.17 BAM41108.1 - 0.72 10.1 12.7 13 6.2 0.1 6.1 7 0 0 7 7 7 0 Tetratricopeptide repeat TPR_8 PF13181.6 BAM41108.1 - 1.2 9.5 14.1 31 5.1 0.0 6.9 7 0 0 7 7 7 0 Tetratricopeptide repeat PhoLip_ATPase_C PF16212.5 BAM41109.1 - 1.4e-64 218.3 28.9 1.4e-64 218.3 28.9 2.9 3 0 0 3 3 3 1 Phospholipid-translocating P-type ATPase C-terminal PhoLip_ATPase_N PF16209.5 BAM41109.1 - 7.5e-19 67.2 2.7 3.4e-18 65.1 2.7 2.2 1 0 0 1 1 1 1 Phospholipid-translocating ATPase N-terminal E1-E2_ATPase PF00122.20 BAM41109.1 - 4.2e-05 23.2 9.4 0.00015 21.4 0.0 3.4 3 0 0 3 3 3 2 E1-E2 ATPase Hydrolase PF00702.26 BAM41109.1 - 8.8e-05 22.9 0.0 0.0059 16.9 0.0 2.3 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 BAM41109.1 - 0.025 14.3 0.1 0.063 13.0 0.1 1.7 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Inh PF02974.14 BAM41109.1 - 0.079 13.0 0.1 0.26 11.4 0.1 1.8 1 0 0 1 1 1 0 Protease inhibitor Inh DEAD PF00270.29 BAM41110.1 - 8.5e-48 162.4 0.0 2.8e-47 160.7 0.0 1.9 1 1 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM41110.1 - 1.4e-32 112.3 0.0 9.6e-32 109.6 0.1 2.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain HDA2-3 PF11496.8 BAM41110.1 - 0.015 14.5 1.6 0.017 14.3 0.1 1.8 2 0 0 2 2 2 0 Class II histone deacetylase complex subunits 2 and 3 GED PF02212.18 BAM41111.1 - 0.013 15.6 0.2 0.018 15.2 0.2 1.1 1 0 0 1 1 1 0 Dynamin GTPase effector domain Med6 PF04934.14 BAM41112.1 - 2.2e-18 66.3 0.2 3.3e-18 65.7 0.2 1.3 1 0 0 1 1 1 1 MED6 mediator sub complex component Sua5_yciO_yrdC PF01300.18 BAM41113.1 - 1.7e-41 141.7 0.0 3.4e-41 140.7 0.0 1.4 1 0 0 1 1 1 1 Telomere recombination SUA5 PF03481.13 BAM41113.1 - 2.5e-12 47.5 0.0 6e-12 46.3 0.0 1.6 1 0 0 1 1 1 1 Putative GTP-binding controlling metal-binding Elf1 PF05129.13 BAM41113.1 - 0.42 10.7 2.5 4.2 7.5 0.1 3.2 2 1 1 3 3 3 0 Transcription elongation factor Elf1 like SRP14 PF02290.15 BAM41114.1 - 3.1e-15 56.3 0.1 3.4e-15 56.2 0.1 1.0 1 0 0 1 1 1 1 Signal recognition particle 14kD protein AAA PF00004.29 BAM41116.1 - 1.9e-13 50.9 0.3 9.1e-13 48.8 0.0 2.3 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 BAM41116.1 - 4.3e-13 49.7 0.0 9.9e-13 48.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAM41116.1 - 4.6e-09 36.9 0.0 1e-06 29.2 0.0 2.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_lid_10 PF17872.1 BAM41116.1 - 0.00015 21.8 0.1 0.00052 20.1 0.1 1.9 1 0 0 1 1 1 1 AAA lid domain AAA_14 PF13173.6 BAM41116.1 - 0.0019 18.2 0.4 0.014 15.4 0.1 2.6 2 1 0 2 2 2 1 AAA domain Rad17 PF03215.15 BAM41116.1 - 0.0024 17.8 0.0 0.0068 16.3 0.0 1.7 1 0 0 1 1 1 1 Rad17 P-loop domain NACHT PF05729.12 BAM41116.1 - 0.0027 17.7 0.0 0.0047 16.9 0.0 1.4 1 0 0 1 1 1 1 NACHT domain AAA_19 PF13245.6 BAM41116.1 - 0.026 14.9 0.2 0.1 12.9 0.1 2.0 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 BAM41116.1 - 0.03 14.0 0.0 0.051 13.3 0.0 1.3 1 0 0 1 1 1 0 AAA domain MeaB PF03308.16 BAM41116.1 - 0.049 12.6 0.2 0.097 11.6 0.2 1.4 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Lipase_bact_N PF12262.8 BAM41116.1 - 0.073 12.4 0.1 0.13 11.6 0.1 1.3 1 0 0 1 1 1 0 Bacterial virulence factor lipase N-terminal DUF1397 PF07165.11 BAM41116.1 - 0.22 10.9 1.4 6.6 6.1 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1397) AAA_5 PF07728.14 BAM41116.1 - 0.27 11.2 3.8 7.6 6.5 0.1 3.6 4 1 0 4 4 4 0 AAA domain (dynein-related subfamily) HMG_box PF00505.19 BAM41118.1 - 1.4e-22 79.9 1.1 2e-22 79.4 1.1 1.2 1 0 0 1 1 1 1 HMG (high mobility group) box HMG_box_2 PF09011.10 BAM41118.1 - 1.2e-15 57.8 1.2 1.7e-15 57.3 1.2 1.2 1 0 0 1 1 1 1 HMG-box domain HMG_box_5 PF14887.6 BAM41118.1 - 0.002 18.1 1.3 0.0031 17.5 0.9 1.7 1 1 0 1 1 1 1 HMG (high mobility group) box 5 TRAUB PF08164.12 BAM41119.1 - 4.7e-10 39.9 2.1 1e-09 38.8 2.1 1.6 1 0 0 1 1 1 1 Apoptosis-antagonizing transcription factor, C-terminal AATF-Che1 PF13339.6 BAM41119.1 - 0.015 16.0 5.8 0.055 14.1 5.8 2.0 1 1 0 1 1 1 0 Apoptosis antagonizing transcription factor NFACT-R_1 PF05670.13 BAM41120.1 - 1.3e-28 99.8 0.0 7.2e-28 97.4 0.0 2.3 1 1 0 1 1 1 1 NFACT protein RNA binding domain FbpA PF05833.11 BAM41120.1 - 6.6e-27 94.4 12.5 2.6e-26 92.4 12.5 2.1 1 1 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) NFACT-C PF11923.8 BAM41120.1 - 4.1e-15 55.6 0.0 4.1e-15 55.6 0.0 3.6 4 0 0 4 4 4 1 NFACT protein C-terminal domain Rav1p_C PF12234.8 BAM41121.1 - 4.1e-24 85.0 5.8 6.8e-22 77.6 2.8 3.2 3 0 0 3 3 3 2 RAVE protein 1 C terminal zf-SAP30 PF13866.6 BAM41121.1 - 0.038 14.1 0.0 0.15 12.2 0.0 2.0 1 0 0 1 1 1 0 SAP30 zinc-finger RNase_Zc3h12a_2 PF14626.6 BAM41121.1 - 0.45 10.7 4.6 9.1 6.5 0.3 3.6 3 0 0 3 3 3 0 Zc3h12a-like Ribonuclease NYN domain A_deaminase PF00962.22 BAM41125.1 - 1.4e-125 419.0 0.4 1.9e-125 418.6 0.4 1.2 1 0 0 1 1 1 1 Adenosine/AMP deaminase DUF5121 PF17165.4 BAM41126.1 - 0.062 13.7 0.2 0.11 13.0 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF5121) Peptidase_M24 PF00557.24 BAM41129.1 - 1.1e-45 155.9 0.1 1.4e-24 86.9 0.0 2.2 2 0 0 2 2 2 2 Metallopeptidase family M24 FHA PF00498.26 BAM41130.1 - 1.2e-19 70.4 0.6 2.1e-09 37.6 0.7 3.2 3 0 0 3 3 3 2 FHA domain zf-C3HC4_4 PF15227.6 BAM41130.1 - 4.5e-09 36.3 11.1 1.2e-08 35.0 11.1 1.8 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-C3HC4_3 PF13920.6 BAM41130.1 - 5.1e-09 35.9 4.8 9e-09 35.1 4.8 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 BAM41130.1 - 2.7e-08 33.5 8.0 5.9e-08 32.4 8.0 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 BAM41130.1 - 3.3e-08 33.4 7.0 1.2e-07 31.6 7.0 2.0 1 1 1 2 2 2 1 RING-type zinc-finger zf-C3HC4 PF00097.25 BAM41130.1 - 4.7e-07 29.6 7.3 1e-06 28.5 7.3 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 BAM41130.1 - 1.9e-06 28.1 8.0 1.9e-06 28.1 8.0 1.8 2 0 0 2 2 1 1 Ring finger domain Prok-RING_4 PF14447.6 BAM41130.1 - 5.2e-05 23.0 6.4 0.00019 21.2 6.4 2.0 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-RING_5 PF14634.6 BAM41130.1 - 5.9e-05 22.9 8.5 0.00015 21.7 8.5 1.7 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_10 PF16685.5 BAM41130.1 - 0.0059 16.7 2.9 0.015 15.4 2.9 1.6 1 0 0 1 1 1 1 zinc RING finger of MSL2 U-box PF04564.15 BAM41130.1 - 0.008 16.3 0.3 0.12 12.5 0.0 2.6 2 0 0 2 2 2 1 U-box domain zf-RING_4 PF14570.6 BAM41130.1 - 0.013 15.3 2.4 0.013 15.3 2.4 1.8 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain zf-Nse PF11789.8 BAM41130.1 - 0.097 12.5 1.8 0.25 11.2 1.8 1.8 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit zf-RING_6 PF14835.6 BAM41130.1 - 0.14 12.0 4.3 0.27 11.1 4.3 1.5 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-rbx1 PF12678.7 BAM41130.1 - 0.34 11.2 9.2 0.06 13.6 4.9 2.1 2 0 0 2 2 2 0 RING-H2 zinc finger domain dCMP_cyt_deam_1 PF00383.23 BAM41135.1 - 1.4e-10 41.0 1.6 2.5e-10 40.1 1.6 1.4 1 0 0 1 1 1 1 Cytidine and deoxycytidylate deaminase zinc-binding region MafB19-deam PF14437.6 BAM41135.1 - 1.3e-06 28.2 3.4 1.6e-06 27.9 1.6 2.2 2 1 0 2 2 2 1 MafB19-like deaminase DUF3444 PF11926.8 BAM41135.1 - 0.085 12.5 0.2 0.17 11.5 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3444) Spc7_C2 PF15577.6 BAM41136.1 - 0.13 12.3 0.6 0.33 11.1 0.6 1.6 1 0 0 1 1 1 0 Spc7_C2 DUF2207 PF09972.9 BAM41136.1 - 0.35 9.6 2.7 0.85 8.3 2.6 1.8 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) CactinC_cactus PF09732.9 BAM41138.1 - 3.9e-49 165.7 3.4 9.1e-49 164.6 3.4 1.6 1 0 0 1 1 1 1 Cactus-binding C-terminus of cactin protein Cactin_mid PF10312.9 BAM41138.1 - 3.7e-33 114.9 3.4 3.7e-33 114.9 3.4 2.0 2 0 0 2 2 2 1 Conserved mid region of cactin SF3A2 PF16835.5 BAM41138.1 - 0.074 13.4 0.1 0.44 11.0 0.0 2.3 2 0 0 2 2 2 0 Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) SHNi-TPR PF10516.9 BAM41139.1 - 1.2e-09 37.5 0.0 2.7e-09 36.3 0.0 1.7 1 0 0 1 1 1 1 SHNi-TPR TPR_2 PF07719.17 BAM41139.1 - 2e-06 27.5 0.4 0.037 14.2 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_12 PF13424.6 BAM41139.1 - 2.4e-05 24.5 0.2 0.014 15.7 0.0 2.5 2 0 0 2 2 2 2 Tetratricopeptide repeat TPR_1 PF00515.28 BAM41139.1 - 3.1e-05 23.6 0.3 0.054 13.3 0.0 3.2 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_11 PF13414.6 BAM41139.1 - 0.00013 21.6 0.0 0.00072 19.2 0.0 2.1 2 0 0 2 2 2 1 TPR repeat TPR_8 PF13181.6 BAM41139.1 - 0.0006 19.8 3.3 0.32 11.3 0.0 3.7 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_16 PF13432.6 BAM41139.1 - 0.0066 17.1 0.0 0.14 12.8 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat ANAPC3 PF12895.7 BAM41139.1 - 0.029 14.6 3.0 6.3 7.1 0.5 3.1 2 1 1 3 3 3 0 Anaphase-promoting complex, cyclosome, subunit 3 ELL PF10390.9 BAM41139.1 - 0.076 12.5 1.7 0.12 11.8 1.7 1.3 1 0 0 1 1 1 0 RNA polymerase II elongation factor ELL Myb_DNA-bind_7 PF15963.5 BAM41140.1 - 7.1e-21 73.9 2.5 7.1e-21 73.9 2.5 2.8 2 0 0 2 2 2 1 Myb DNA-binding like DUF726 PF05277.12 BAM41141.1 - 6e-70 235.9 0.5 1.4e-59 201.8 0.1 3.0 2 1 0 2 2 2 2 Protein of unknown function (DUF726) Cutinase PF01083.22 BAM41141.1 - 0.036 14.0 0.0 0.088 12.8 0.0 1.6 1 0 0 1 1 1 0 Cutinase DUF737 PF05300.11 BAM41141.1 - 0.037 14.4 3.0 0.067 13.5 0.2 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF737) UQ_con PF00179.26 BAM41143.1 - 2.1e-54 183.0 0.1 2.3e-54 182.8 0.1 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 BAM41143.1 - 6.2e-05 22.7 0.0 8.1e-05 22.3 0.0 1.1 1 0 0 1 1 1 1 Prokaryotic E2 family B RWD PF05773.22 BAM41143.1 - 0.012 15.9 0.1 0.013 15.8 0.1 1.3 1 1 0 1 1 1 0 RWD domain UEV PF05743.13 BAM41143.1 - 0.018 14.9 0.1 0.032 14.1 0.1 1.4 1 0 0 1 1 1 0 UEV domain NAP PF00956.18 BAM41144.1 - 4.5e-61 206.4 11.5 7.3e-59 199.2 11.5 2.1 1 1 0 1 1 1 1 Nucleosome assembly protein (NAP) FCH PF00611.23 BAM41144.1 - 0.0037 17.5 0.0 0.0092 16.2 0.0 1.7 1 0 0 1 1 1 1 Fes/CIP4, and EFC/F-BAR homology domain Ribosomal_L12_N PF16320.5 BAM41144.1 - 0.021 14.5 0.7 0.52 10.1 0.4 2.4 2 0 0 2 2 2 0 Ribosomal protein L7/L12 dimerisation domain Proteasome PF00227.26 BAM41145.1 - 2.7e-32 111.8 0.1 3.1e-32 111.6 0.1 1.0 1 0 0 1 1 1 1 Proteasome subunit RtcR PF06956.11 BAM41145.1 - 0.14 11.6 0.0 0.21 11.0 0.0 1.2 1 0 0 1 1 1 0 Regulator of RNA terminal phosphate cyclase PCNA_N PF00705.18 BAM41146.1 - 2e-43 147.1 1.8 2e-43 147.1 1.8 1.7 2 0 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 BAM41146.1 - 1e-27 96.8 0.0 1.9e-27 96.0 0.0 1.5 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, C-terminal domain Rad9 PF04139.13 BAM41146.1 - 0.002 17.6 0.3 0.0027 17.2 0.3 1.1 1 0 0 1 1 1 1 Rad9 EMC3_TMCO1 PF01956.16 BAM41147.1 - 7e-20 71.4 1.2 8.5e-20 71.2 1.2 1.0 1 0 0 1 1 1 1 Integral membrane protein EMC3/TMCO1-like DUF3021 PF11457.8 BAM41147.1 - 0.59 10.5 4.7 1.8 8.9 0.0 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF3021) TIP49 PF06068.13 BAM41148.1 - 1.4e-155 517.9 0.0 1.6e-155 517.6 0.0 1.0 1 0 0 1 1 1 1 TIP49 P-loop domain TIP49_C PF17856.1 BAM41148.1 - 2.8e-20 72.2 0.8 6.6e-20 71.0 0.1 2.1 2 0 0 2 2 1 1 TIP49 AAA-lid domain AAA_22 PF13401.6 BAM41148.1 - 1.6e-08 34.9 0.1 0.0016 18.7 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA PF00004.29 BAM41148.1 - 2.1e-07 31.5 0.2 2.4e-05 24.8 0.0 2.5 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 BAM41148.1 - 2e-06 27.4 0.8 0.00021 20.7 0.2 2.6 3 0 0 3 3 3 1 Magnesium chelatase, subunit ChlI RuvB_N PF05496.12 BAM41148.1 - 1.5e-05 24.8 0.2 0.008 15.9 0.0 2.5 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain Zeta_toxin PF06414.12 BAM41148.1 - 6.9e-05 22.2 0.1 0.00014 21.2 0.1 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_16 PF13191.6 BAM41148.1 - 0.00014 22.3 0.1 0.00053 20.4 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain DnaB_C PF03796.15 BAM41148.1 - 0.00021 20.7 0.1 0.00055 19.4 0.1 1.7 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain AAA_5 PF07728.14 BAM41148.1 - 0.00044 20.3 0.1 0.0057 16.6 0.0 2.5 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_19 PF13245.6 BAM41148.1 - 0.00077 19.8 2.8 0.029 14.7 2.8 2.7 1 1 0 1 1 1 1 AAA domain Sigma54_activat PF00158.26 BAM41148.1 - 0.001 18.8 0.1 0.13 12.0 0.1 2.4 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_17 PF13207.6 BAM41148.1 - 0.0029 18.1 0.0 0.0082 16.6 0.0 1.8 1 0 0 1 1 1 1 AAA domain CPT PF07931.12 BAM41148.1 - 0.0069 16.3 0.0 0.031 14.1 0.0 2.0 2 0 0 2 2 2 1 Chloramphenicol phosphotransferase-like protein AAA_25 PF13481.6 BAM41148.1 - 0.0076 15.8 0.0 0.015 14.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 BAM41148.1 - 0.011 15.6 0.0 0.021 14.7 0.0 1.4 1 0 0 1 1 1 0 NACHT domain AAA_18 PF13238.6 BAM41148.1 - 0.032 14.8 0.0 0.093 13.3 0.0 2.0 1 1 0 1 1 1 0 AAA domain ResIII PF04851.15 BAM41148.1 - 0.037 14.0 0.1 5.4 7.0 0.0 2.3 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_23 PF13476.6 BAM41148.1 - 0.04 14.4 0.4 0.079 13.4 0.4 1.4 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 BAM41148.1 - 0.043 13.5 0.3 2.3 7.9 0.1 2.2 2 0 0 2 2 2 0 AAA domain DUF2075 PF09848.9 BAM41148.1 - 0.043 13.1 0.2 0.084 12.1 0.0 1.5 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) ATPase PF06745.13 BAM41148.1 - 0.049 13.0 0.9 0.083 12.2 0.9 1.5 1 1 0 1 1 1 0 KaiC APS_kinase PF01583.20 BAM41148.1 - 0.053 13.4 0.0 0.1 12.5 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase TsaE PF02367.17 BAM41148.1 - 0.064 13.3 0.1 0.15 12.1 0.1 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 BAM41148.1 - 0.07 13.3 0.0 0.15 12.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 BAM41148.1 - 0.076 12.5 0.1 0.2 11.1 0.0 1.7 2 0 0 2 2 2 0 P-loop containing dynein motor region KTI12 PF08433.10 BAM41148.1 - 0.086 12.3 0.0 0.15 11.4 0.0 1.4 1 0 0 1 1 1 0 Chromatin associated protein KTI12 AAA_29 PF13555.6 BAM41148.1 - 0.16 11.7 0.5 2.3 8.0 0.2 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain Caveolin PF01146.17 BAM41150.1 - 6 6.8 8.5 2 8.4 2.1 2.9 3 0 0 3 3 3 0 Caveolin Vps51 PF08700.11 BAM41152.1 - 0.015 15.4 2.5 0.015 15.4 2.5 3.2 3 0 0 3 3 3 0 Vps51/Vps67 DUF4298 PF14131.6 BAM41152.1 - 0.049 13.6 2.0 0.87 9.6 0.1 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4298) RITA PF17066.5 BAM41155.1 - 0.26 10.8 0.0 0.27 10.8 0.0 1.0 1 0 0 1 1 1 0 RBPJ-interacting and tubulin associated protein DUF382 PF04037.13 BAM41156.1 - 1.4e-52 177.2 3.9 1.4e-52 177.2 3.9 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF382) PSP PF04046.16 BAM41156.1 - 9.2e-22 76.7 3.9 2e-21 75.6 2.7 2.2 2 0 0 2 2 2 1 PSP UPF0172 PF03665.13 BAM41156.1 - 0.01 15.9 0.9 0.028 14.5 0.9 1.7 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0172) EST1 PF10374.9 BAM41156.1 - 2.1 9.0 6.6 0.64 10.6 2.1 2.4 3 0 0 3 3 3 0 Telomerase activating protein Est1 TPR_1 PF00515.28 BAM41157.1 - 1.4e-14 53.2 1.7 3.7e-05 23.4 0.4 3.6 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 BAM41157.1 - 1e-13 50.2 0.7 0.0054 16.7 0.0 3.6 3 0 0 3 3 3 3 Tetratricopeptide repeat TPR_12 PF13424.6 BAM41157.1 - 2.4e-09 37.3 4.7 7.3e-07 29.4 0.2 2.4 1 1 1 2 2 2 2 Tetratricopeptide repeat TPR_7 PF13176.6 BAM41157.1 - 5e-07 29.3 1.0 0.012 15.6 0.4 3.4 3 1 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 BAM41157.1 - 1.4e-05 24.9 3.8 0.054 13.7 0.1 3.8 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_11 PF13414.6 BAM41157.1 - 0.00046 19.8 0.2 6.7 6.5 0.0 3.4 2 1 1 3 3 3 2 TPR repeat TPR_14 PF13428.6 BAM41157.1 - 0.026 15.3 0.4 31 5.8 0.0 3.3 2 1 1 3 3 3 0 Tetratricopeptide repeat SPO22 PF08631.10 BAM41157.1 - 0.036 13.5 0.0 0.062 12.8 0.0 1.3 1 0 0 1 1 1 0 Meiosis protein SPO22/ZIP4 like TPR_9 PF13371.6 BAM41157.1 - 0.11 12.6 2.0 2.8 8.1 0.2 2.5 2 1 0 2 2 2 0 Tetratricopeptide repeat DEAD PF00270.29 BAM41158.1 - 8.4e-32 110.3 0.1 1.6e-31 109.4 0.1 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM41158.1 - 1.6e-18 67.1 0.0 6e-18 65.2 0.0 2.1 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM41158.1 - 6.4e-07 29.5 0.0 1.8e-06 28.1 0.0 1.8 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 BAM41158.1 - 0.017 15.4 1.2 0.095 13.0 0.2 2.8 2 1 1 3 3 3 0 AAA domain DUF2185 PF09951.9 BAM41158.1 - 0.071 13.0 0.1 11 6.0 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2185) AAA PF00004.29 BAM41159.1 - 1.3e-15 58.0 0.0 2.8e-15 56.9 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rep_fac_C PF08542.11 BAM41159.1 - 1.8e-14 53.9 0.0 4.9e-14 52.5 0.0 1.8 1 0 0 1 1 1 1 Replication factor C C-terminal domain DNA_pol3_delta2 PF13177.6 BAM41159.1 - 1.9e-09 37.5 0.4 4.6e-07 29.7 1.0 2.4 1 1 1 2 2 2 1 DNA polymerase III, delta subunit Rad17 PF03215.15 BAM41159.1 - 1e-06 28.8 0.0 3.1e-06 27.2 0.0 1.9 1 1 0 1 1 1 1 Rad17 P-loop domain AAA_16 PF13191.6 BAM41159.1 - 6.4e-06 26.7 0.2 0.0031 17.9 0.0 2.5 1 1 1 2 2 2 1 AAA ATPase domain AAA_24 PF13479.6 BAM41159.1 - 1.5e-05 24.8 0.0 2.5e-05 24.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.6 BAM41159.1 - 2e-05 24.7 0.0 3.3e-05 23.9 0.0 1.4 1 0 0 1 1 1 1 AAA domain RuvB_N PF05496.12 BAM41159.1 - 2.7e-05 24.0 0.0 6.9e-05 22.6 0.0 1.8 1 1 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 BAM41159.1 - 3.3e-05 24.2 0.8 0.014 15.7 0.1 2.5 1 1 1 2 2 2 1 AAA domain DNA_pol3_delta PF06144.13 BAM41159.1 - 0.00011 22.0 0.5 0.00022 21.0 0.5 1.4 1 0 0 1 1 1 1 DNA polymerase III, delta subunit AAA_5 PF07728.14 BAM41159.1 - 0.00015 21.8 0.1 0.00041 20.4 0.1 1.7 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 BAM41159.1 - 0.00026 20.5 0.0 0.00041 19.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_19 PF13245.6 BAM41159.1 - 0.00041 20.7 0.1 0.0018 18.6 0.1 1.8 1 1 0 1 1 1 1 AAA domain TniB PF05621.11 BAM41159.1 - 0.00043 19.7 0.3 0.17 11.3 0.0 2.3 2 0 0 2 2 2 1 Bacterial TniB protein AAA_11 PF13086.6 BAM41159.1 - 0.0011 18.8 0.0 0.0017 18.2 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_18 PF13238.6 BAM41159.1 - 0.0011 19.5 0.0 0.0022 18.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 BAM41159.1 - 0.0011 18.3 0.0 0.0024 17.3 0.0 1.7 1 1 0 1 1 1 1 Magnesium chelatase, subunit ChlI Viral_helicase1 PF01443.18 BAM41159.1 - 0.0015 18.3 0.0 0.0028 17.4 0.0 1.4 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase AAA_25 PF13481.6 BAM41159.1 - 0.0019 17.8 0.1 0.0064 16.1 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_assoc_2 PF16193.5 BAM41159.1 - 0.0037 17.6 0.0 0.015 15.6 0.0 2.1 2 0 0 2 2 1 1 AAA C-terminal domain KTI12 PF08433.10 BAM41159.1 - 0.0086 15.6 0.0 0.014 14.8 0.0 1.4 1 0 0 1 1 1 1 Chromatin associated protein KTI12 IstB_IS21 PF01695.17 BAM41159.1 - 0.012 15.4 0.0 0.023 14.5 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein NTPase_1 PF03266.15 BAM41159.1 - 0.013 15.4 1.0 1.4 8.8 0.1 2.5 1 1 0 2 2 2 0 NTPase AAA_3 PF07726.11 BAM41159.1 - 0.013 15.3 0.0 0.024 14.5 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) TIP49 PF06068.13 BAM41159.1 - 0.019 14.2 0.1 0.027 13.7 0.1 1.2 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_30 PF13604.6 BAM41159.1 - 0.034 13.9 0.0 0.061 13.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 BAM41159.1 - 0.035 13.3 0.0 0.079 12.1 0.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF815) Sigma54_activ_2 PF14532.6 BAM41159.1 - 0.047 13.8 0.1 0.23 11.5 0.1 2.1 1 1 0 1 1 1 0 Sigma-54 interaction domain DEAD PF00270.29 BAM41159.1 - 0.058 13.2 0.9 2.9 7.6 0.0 2.6 2 1 1 3 3 3 0 DEAD/DEAH box helicase FtsK_SpoIIIE PF01580.18 BAM41159.1 - 0.064 12.6 0.0 0.14 11.5 0.0 1.5 1 0 0 1 1 1 0 FtsK/SpoIIIE family RNA_helicase PF00910.22 BAM41159.1 - 0.065 13.6 0.0 0.2 12.1 0.0 1.8 2 0 0 2 2 1 0 RNA helicase AAA_33 PF13671.6 BAM41159.1 - 0.067 13.4 0.2 0.14 12.3 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 BAM41159.1 - 0.069 13.4 0.0 0.13 12.5 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_2 PF07724.14 BAM41159.1 - 0.096 12.8 0.0 0.17 11.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain (Cdc48 subfamily) ATPase PF06745.13 BAM41159.1 - 0.33 10.2 3.4 8.1 5.7 0.7 2.4 1 1 0 2 2 2 0 KaiC Mito_carr PF00153.27 BAM41160.1 - 9.2e-48 160.1 0.8 4.5e-20 71.4 0.1 3.2 3 0 0 3 3 3 3 Mitochondrial carrier protein RBFA PF02033.18 BAM41161.1 - 1.1e-09 38.7 0.0 4.9e-09 36.6 0.0 2.1 1 0 0 1 1 1 1 Ribosome-binding factor A DUF3496 PF12001.8 BAM41161.1 - 0.9 9.9 6.6 2.7 8.4 0.7 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF3496) Ribosomal_L30 PF00327.20 BAM41161.1 - 1.6 8.7 5.0 1.1 9.2 2.0 2.2 2 0 0 2 2 2 0 Ribosomal protein L30p/L7e S4 PF01479.25 BAM41162.1 - 1.5e-09 37.4 0.1 7.6e-09 35.1 0.1 2.0 2 0 0 2 2 2 1 S4 domain Ribosomal_S4 PF00163.19 BAM41162.1 - 5.2e-09 36.9 0.6 7.7e-09 36.3 0.6 1.5 1 0 0 1 1 1 1 Ribosomal protein S4/S9 N-terminal domain Mac-1 PF09028.10 BAM41162.1 - 0.04 13.0 0.1 0.051 12.6 0.1 1.1 1 0 0 1 1 1 0 Mac 1 Ribosomal_S28e PF01200.18 BAM41163.1 - 1.3e-32 111.5 0.7 1.5e-32 111.4 0.7 1.0 1 0 0 1 1 1 1 Ribosomal protein S28e MORN PF02493.20 BAM41164.1 - 1.1e-28 97.4 53.0 6.5e-06 25.7 3.0 8.5 8 0 0 8 8 8 7 MORN repeat ParA PF10609.9 BAM41165.1 - 4.2e-72 242.5 0.0 5e-72 242.3 0.0 1.1 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 BAM41165.1 - 3e-13 49.9 0.0 4e-13 49.5 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 BAM41165.1 - 7.3e-10 39.0 0.4 5.7e-09 36.1 0.4 2.0 1 1 0 1 1 1 1 AAA domain MipZ PF09140.11 BAM41165.1 - 1e-07 31.6 0.0 2.7e-07 30.2 0.0 1.7 1 1 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.15 BAM41165.1 - 9.1e-07 28.4 2.5 4e-05 22.9 0.7 2.9 1 1 1 3 3 3 1 Anion-transporting ATPase MeaB PF03308.16 BAM41165.1 - 0.00084 18.4 0.3 0.0013 17.7 0.3 1.2 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB CBP_BcsQ PF06564.12 BAM41165.1 - 0.00084 18.9 0.2 0.14 11.6 0.2 2.1 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ Fer4_NifH PF00142.18 BAM41165.1 - 0.0056 16.2 0.0 0.0087 15.5 0.0 1.3 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NB-ARC PF00931.22 BAM41165.1 - 0.025 13.8 0.3 0.051 12.7 0.1 1.5 2 0 0 2 2 2 0 NB-ARC domain SRP54 PF00448.22 BAM41165.1 - 0.026 14.2 0.1 0.28 10.8 0.1 2.0 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_26 PF13500.6 BAM41165.1 - 0.027 14.3 0.1 0.075 12.8 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_25 PF13481.6 BAM41165.1 - 0.033 13.8 0.0 0.061 12.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain CLP1_P PF16575.5 BAM41165.1 - 0.041 13.7 0.0 0.077 12.8 0.0 1.5 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop APS_kinase PF01583.20 BAM41165.1 - 0.046 13.6 0.1 0.074 12.9 0.1 1.3 1 0 0 1 1 1 0 Adenylylsulphate kinase VirC1 PF07015.11 BAM41165.1 - 0.095 12.0 0.0 0.18 11.1 0.0 1.4 1 0 0 1 1 1 0 VirC1 protein RsgA_GTPase PF03193.16 BAM41165.1 - 0.097 12.6 0.1 0.21 11.5 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA PF00004.29 BAM41165.1 - 0.12 12.8 0.1 1.2 9.5 0.1 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 BAM41165.1 - 0.21 11.3 0.0 0.51 10.0 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein DNA_primase_lrg PF04104.14 BAM41166.1 - 7e-54 183.0 0.6 5.3e-52 176.8 0.6 2.6 1 1 0 1 1 1 1 Eukaryotic and archaeal DNA primase, large subunit SPRY PF00622.28 BAM41167.1 - 1.5e-08 34.8 0.1 8.2e-07 29.2 0.1 2.5 2 0 0 2 2 2 2 SPRY domain Prenyltransf PF01255.19 BAM41168.1 - 1.6e-37 129.2 0.0 1.9e-37 128.9 0.0 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase DUF1576 PF07613.11 BAM41168.1 - 0.15 11.6 0.1 0.22 11.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1576) Thioredoxin PF00085.20 BAM41169.1 - 2.3e-45 152.8 1.0 2.7e-27 94.7 0.3 3.2 3 0 0 3 3 3 2 Thioredoxin Thioredoxin_6 PF13848.6 BAM41169.1 - 1.9e-21 76.8 7.6 1.2e-11 44.8 0.1 4.5 5 1 0 5 5 5 3 Thioredoxin-like domain OST3_OST6 PF04756.13 BAM41169.1 - 2.3e-11 43.6 2.6 6e-06 25.8 0.1 2.9 2 1 1 3 3 3 2 OST3 / OST6 family, transporter family Thioredoxin_7 PF13899.6 BAM41169.1 - 5.8e-11 42.4 0.3 1.2e-05 25.4 0.2 2.6 2 0 0 2 2 2 2 Thioredoxin-like Thioredoxin_8 PF13905.6 BAM41169.1 - 1.9e-10 40.9 9.0 0.0003 21.0 0.2 4.9 4 2 0 4 4 4 2 Thioredoxin-like Thioredoxin_2 PF13098.6 BAM41169.1 - 4.1e-10 40.1 4.9 4.3e-06 27.1 0.0 3.9 3 1 0 3 3 3 2 Thioredoxin-like domain AhpC-TSA PF00578.21 BAM41169.1 - 6.6e-07 29.3 0.3 0.00033 20.6 0.1 2.8 2 0 0 2 2 2 2 AhpC/TSA family ERp29_N PF07912.13 BAM41169.1 - 4.2e-05 23.7 1.4 0.023 14.9 0.1 2.7 3 0 0 3 3 3 2 ERp29, N-terminal domain TraF PF13728.6 BAM41169.1 - 0.0052 16.6 0.1 1.8 8.3 0.0 2.5 2 0 0 2 2 2 2 F plasmid transfer operon protein Redoxin PF08534.10 BAM41169.1 - 0.014 15.2 0.2 1.2 8.8 0.1 2.6 2 0 0 2 2 2 0 Redoxin Thioredoxin_3 PF13192.6 BAM41169.1 - 0.025 14.6 0.4 2.4 8.3 0.0 3.1 3 0 0 3 3 3 0 Thioredoxin domain DUF3786 PF12654.7 BAM41169.1 - 0.11 12.1 1.2 0.43 10.1 0.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3786) 2OG-FeII_Oxy_3 PF13640.6 BAM41170.1 - 2.1e-09 38.1 0.0 4.5e-09 37.1 0.0 1.5 2 0 0 2 2 2 1 2OG-Fe(II) oxygenase superfamily 2OG-FeII_Oxy_4 PF13661.6 BAM41170.1 - 0.032 14.9 0.0 0.073 13.7 0.0 1.7 1 0 0 1 1 1 0 2OG-Fe(II) oxygenase superfamily LSM PF01423.22 BAM41171.1 - 6.5e-17 61.0 0.1 7.6e-17 60.8 0.1 1.1 1 0 0 1 1 1 1 LSM domain tRNA-synt_1 PF00133.22 BAM41173.1 - 2.9e-33 115.0 6.3 8.6e-20 70.5 0.2 4.6 3 2 1 4 4 4 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 BAM41173.1 - 8.6e-25 87.3 3.4 8e-16 57.8 0.0 3.4 4 0 0 4 4 4 2 tRNA synthetases class I (M) Anticodon_1 PF08264.13 BAM41173.1 - 5.2e-10 39.5 0.2 1.5e-09 38.0 0.0 2.0 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 BAM41173.1 - 0.0004 19.8 0.2 0.0096 15.3 0.1 2.3 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 BAM41173.1 - 0.001 18.6 0.1 0.0046 16.5 0.0 2.0 2 0 0 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 ubiquitin PF00240.23 BAM41176.1 - 4.1e-18 64.9 0.0 8.1e-18 63.9 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin family Rad60-SLD PF11976.8 BAM41176.1 - 8.9e-06 25.5 0.0 1.8e-05 24.5 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin-2 like Rad60 SUMO-like Rad60-SLD_2 PF13881.6 BAM41176.1 - 0.012 15.8 0.0 0.025 14.7 0.0 1.5 1 0 0 1 1 1 0 Ubiquitin-2 like Rad60 SUMO-like Ubiquitin_2 PF14560.6 BAM41176.1 - 0.041 14.3 0.0 0.11 13.0 0.0 1.7 1 0 0 1 1 1 0 Ubiquitin-like domain Methyltransf_11 PF08241.12 BAM41177.1 - 4.5e-14 52.9 0.0 9.9e-14 51.8 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 BAM41177.1 - 3.5e-11 43.2 0.0 5.3e-11 42.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 BAM41177.1 - 5.2e-11 43.1 0.0 1.4e-10 41.7 0.0 1.7 2 0 0 2 2 2 1 Methyltransferase domain Ubie_methyltran PF01209.18 BAM41177.1 - 2.2e-07 30.5 0.0 4.5e-07 29.4 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 BAM41177.1 - 1.8e-06 27.8 0.0 3.4e-06 26.9 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 BAM41177.1 - 0.00083 20.1 0.0 0.0029 18.3 0.0 1.9 1 1 0 1 1 1 1 Methyltransferase domain Tim17 PF02466.19 BAM41178.1 - 4.1e-21 75.4 3.1 5.1e-21 75.1 3.1 1.1 1 0 0 1 1 1 1 Tim17/Tim22/Tim23/Pmp24 family ERO1 PF04137.15 BAM41179.1 - 6.4e-60 203.2 11.1 8.7e-60 202.8 11.1 1.2 1 0 0 1 1 1 1 Endoplasmic Reticulum Oxidoreductin 1 (ERO1) Beach PF02138.18 BAM41180.1 - 1.9e-95 319.4 0.2 6.5e-95 317.6 0.2 1.8 1 1 0 1 1 1 1 Beige/BEACH domain WD40 PF00400.32 BAM41180.1 - 0.26 12.2 0.8 33 5.6 0.0 3.5 3 0 0 3 3 3 0 WD domain, G-beta repeat 60KD_IMP PF02096.20 BAM41181.1 - 2.1e-10 40.8 2.1 2.9e-10 40.3 2.1 1.2 1 0 0 1 1 1 1 60Kd inner membrane protein Band_7 PF01145.25 BAM41182.1 - 1.5e-24 87.0 0.1 2.5e-24 86.2 0.0 1.4 1 1 0 1 1 1 1 SPFH domain / Band 7 family BT1 PF03092.16 BAM41183.1 - 4.3e-55 186.9 19.8 2e-37 128.6 8.5 2.0 2 0 0 2 2 2 2 BT1 family Ku_C PF03730.14 BAM41184.1 - 0.27 12.0 0.1 0.27 12.0 0.1 3.1 3 0 0 3 3 3 0 Ku70/Ku80 C-terminal arm PPR_2 PF13041.6 BAM41187.1 - 2.2e-59 197.4 21.1 8.1e-15 54.8 0.1 8.1 3 1 5 8 8 8 8 PPR repeat family PPR_1 PF12854.7 BAM41187.1 - 1.9e-50 168.2 2.2 3.5e-08 33.0 0.0 8.7 8 0 0 8 8 8 8 PPR repeat PPR PF01535.20 BAM41187.1 - 1.1e-46 153.9 22.4 3.7e-07 29.9 0.0 10.2 10 0 0 10 10 10 9 PPR repeat PPR_3 PF13812.6 BAM41187.1 - 5.7e-42 141.6 12.7 1.3e-14 54.0 0.5 6.4 4 1 1 6 6 6 5 Pentatricopeptide repeat domain PPR_long PF17177.4 BAM41187.1 - 5.5e-20 71.7 0.1 9.5e-13 48.0 0.0 5.3 4 2 2 6 6 6 3 Pentacotripeptide-repeat region of PRORP ATP13 PF12921.7 BAM41187.1 - 1.6e-07 31.2 1.9 0.79 9.6 0.0 5.8 3 2 2 5 5 5 3 Mitochondrial ATPase expression RPM2 PF08579.11 BAM41187.1 - 0.00014 22.2 1.5 0.12 12.8 0.0 4.8 2 1 2 4 4 4 1 Mitochondrial ribonuclease P subunit (RPM2) DUF2048 PF09752.9 BAM41188.1 - 0.073 12.2 1.4 0.12 11.4 1.4 1.3 1 0 0 1 1 1 0 Abhydrolase domain containing 18 FHIPEP PF00771.20 BAM41188.1 - 4.1 5.7 7.5 1.7 7.0 4.6 1.6 1 1 1 2 2 2 0 FHIPEP family Brix PF04427.18 BAM41189.1 - 8.6e-22 78.2 0.4 9.6e-22 78.0 0.4 1.0 1 0 0 1 1 1 1 Brix domain MtrG PF04210.13 BAM41189.1 - 0.075 12.9 0.0 0.13 12.2 0.0 1.3 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit G Gaa1 PF04114.14 BAM41191.1 - 1.5e-24 86.9 23.7 7.9e-23 81.2 9.6 3.5 2 2 0 2 2 2 2 Gaa1-like, GPI transamidase component PLDc PF00614.22 BAM41192.1 - 0.014 15.5 0.0 0.027 14.6 0.0 1.5 1 0 0 1 1 1 0 Phospholipase D Active site motif ERCC4 PF02732.15 BAM41193.1 - 5.8e-17 62.3 0.1 5.8e-17 62.3 0.1 2.8 2 1 0 2 2 2 1 ERCC4 domain MetOD2 PF18548.1 BAM41193.1 - 0.03 14.4 0.0 0.17 12.0 0.0 2.3 1 0 0 1 1 1 0 Metanogen output domain 2 HA2 PF04408.23 BAM41194.1 - 6.4e-19 68.2 0.0 2.7e-18 66.2 0.0 2.1 1 0 0 1 1 1 1 Helicase associated domain (HA2) OB_NTP_bind PF07717.16 BAM41194.1 - 3.9e-15 56.0 0.0 1.1e-14 54.6 0.0 1.8 1 0 0 1 1 1 1 Oligonucleotide/oligosaccharide-binding (OB)-fold Helicase_C PF00271.31 BAM41194.1 - 2.4e-12 47.2 0.0 7e-12 45.7 0.0 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain AAA_22 PF13401.6 BAM41194.1 - 0.00058 20.1 0.1 0.0037 17.5 0.0 2.4 2 0 0 2 2 2 1 AAA domain DEAD PF00270.29 BAM41194.1 - 0.00087 19.1 0.2 0.0043 16.8 0.2 2.1 1 1 0 1 1 1 1 DEAD/DEAH box helicase AAA_30 PF13604.6 BAM41194.1 - 0.0016 18.2 0.0 0.0029 17.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_19 PF13245.6 BAM41194.1 - 0.018 15.4 0.0 0.042 14.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain ATPase PF06745.13 BAM41194.1 - 0.021 14.2 0.1 0.051 12.9 0.1 1.6 1 0 0 1 1 1 0 KaiC Flavi_DEAD PF07652.14 BAM41194.1 - 0.021 14.8 0.0 0.046 13.7 0.0 1.6 1 0 0 1 1 1 0 Flavivirus DEAD domain T2SSE PF00437.20 BAM41194.1 - 0.032 13.3 0.0 0.07 12.2 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein SRP54 PF00448.22 BAM41194.1 - 0.038 13.6 0.0 0.084 12.5 0.0 1.6 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain ResIII PF04851.15 BAM41194.1 - 0.057 13.4 0.0 12 5.8 0.0 2.8 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit Roc PF08477.13 BAM41194.1 - 0.085 13.1 0.2 8.4 6.6 0.0 2.8 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase ABC_tran PF00005.27 BAM41194.1 - 0.68 10.5 0.0 0.68 10.5 0.0 2.7 3 0 0 3 3 2 0 ABC transporter NUC173 PF08161.12 BAM41195.1 - 2.2e-06 27.5 0.0 7.1e-06 25.8 0.0 1.8 1 0 0 1 1 1 1 NUC173 domain DS PF01916.17 BAM41195.1 - 0.03 13.6 0.0 0.052 12.8 0.0 1.3 1 0 0 1 1 1 0 Deoxyhypusine synthase DEK_C PF08766.11 BAM41196.1 - 0.033 14.1 0.1 0.043 13.7 0.1 1.2 1 0 0 1 1 1 0 DEK C terminal domain Antimicrobial_7 PF08102.11 BAM41196.1 - 0.15 12.3 0.0 0.23 11.7 0.0 1.3 1 0 0 1 1 1 0 Scorpion antimicrobial peptide HCV_NS5a PF01506.19 BAM41197.1 - 0.17 11.8 0.5 0.39 10.6 0.5 1.6 1 0 0 1 1 1 0 Hepatitis C virus non-structural 5a protein membrane anchor CTD_bind PF04818.13 BAM41198.1 - 0.022 15.6 1.7 0.1 13.4 1.7 2.2 1 1 0 1 1 1 0 RNA polymerase II-binding domain. Phostensin_N PF13916.6 BAM41199.1 - 0.00024 21.4 0.1 0.00046 20.5 0.1 1.4 1 0 0 1 1 1 1 PP1-regulatory protein, Phostensin N-terminal Tugs PF17840.1 BAM41199.1 - 0.046 13.9 0.2 0.11 12.7 0.2 1.7 1 1 0 1 1 1 0 Tethering Ubl4a to BAGS domain Orthopox_B11R PF07033.11 BAM41199.1 - 0.05 13.4 2.4 0.14 12.0 0.1 2.4 2 0 0 2 2 2 0 Orthopoxvirus B11R protein DUF4602 PF15375.6 BAM41200.1 - 6.4e-06 26.5 20.4 3.1e-05 24.3 20.4 2.1 1 1 0 1 1 1 1 Domain of unknown function (DUF4602) CLN3 PF02487.17 BAM41200.1 - 0.53 9.3 0.7 0.84 8.6 0.7 1.2 1 0 0 1 1 1 0 CLN3 protein Pet100 PF09803.9 BAM41200.1 - 4 8.0 8.8 0.3 11.7 0.8 3.0 3 1 0 3 3 3 0 Pet100 tRNA-synt_2 PF00152.20 BAM41201.1 - 1.1e-77 261.2 0.0 1.4e-77 260.9 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 BAM41201.1 - 7.4e-10 38.7 0.0 1.8e-09 37.4 0.0 1.7 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 BAM41201.1 - 1.2e-09 38.0 0.0 9.7e-06 25.2 0.0 2.6 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) LSM PF01423.22 BAM41202.1 - 1.1e-13 50.6 0.0 1.5e-13 50.2 0.0 1.2 1 0 0 1 1 1 1 LSM domain Hfq PF17209.3 BAM41202.1 - 0.0087 15.7 0.0 0.013 15.1 0.0 1.3 1 0 0 1 1 1 1 Hfq protein DNA_pol_A_exo1 PF01612.20 BAM41203.1 - 2.1e-42 144.8 1.8 2.1e-42 144.8 1.8 1.7 2 0 0 2 2 2 1 3'-5' exonuclease DUF4407 PF14362.6 BAM41203.1 - 4.4 6.6 6.0 7.9 5.7 6.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) BCL9 PF11502.8 BAM41204.1 - 6 6.7 8.1 20 5.0 2.9 2.7 1 1 1 2 2 2 0 B-cell lymphoma 9 protein ERCC4 PF02732.15 BAM41205.1 - 2.7e-21 76.4 0.6 4.2e-17 62.8 0.1 3.0 3 0 0 3 3 3 2 ERCC4 domain HHH_8 PF14716.6 BAM41205.1 - 0.13 12.7 0.0 0.38 11.2 0.0 1.9 1 0 0 1 1 1 0 Helix-hairpin-helix domain Vps4_C PF09336.10 BAM41205.1 - 0.17 11.9 0.2 0.48 10.5 0.0 1.9 2 0 0 2 2 2 0 Vps4 C terminal oligomerisation domain SNARE PF05739.19 BAM41206.1 - 0.084 12.9 0.1 0.22 11.6 0.1 1.7 1 0 0 1 1 1 0 SNARE domain Syntaxin PF00804.25 BAM41206.1 - 0.11 12.2 4.7 0.17 11.6 0.1 2.8 3 0 0 3 3 3 0 Syntaxin zf-C2H2_9 PF16293.5 BAM41206.1 - 0.11 12.3 0.2 0.45 10.4 0.0 2.1 2 0 0 2 2 2 0 C2H2 type zinc-finger (1 copy) Syntaxin_2 PF14523.6 BAM41206.1 - 0.75 10.2 6.6 0.095 13.1 0.7 2.2 2 0 0 2 2 2 0 Syntaxin-like protein DUF4636 PF15468.6 BAM41207.1 - 0.069 12.8 0.1 0.13 11.9 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4636) DUF3385 PF11865.8 BAM41207.1 - 4 7.3 8.3 0.5 10.2 0.1 3.4 3 1 0 3 3 3 0 Domain of unknown function (DUF3385) DUF818 PF05677.12 BAM41208.1 - 0.05 12.5 0.0 0.05 12.5 0.0 1.7 2 0 0 2 2 2 0 Chlamydia CHLPS protein (DUF818) RE_SinI PF09570.10 BAM41209.1 - 0.1 11.8 0.1 0.16 11.2 0.0 1.4 2 0 0 2 2 2 0 SinI restriction endonuclease PET117 PF15786.5 BAM41210.1 - 4.3e-05 23.7 0.1 4.7e-05 23.6 0.1 1.0 1 0 0 1 1 1 1 PET assembly of cytochrome c oxidase, mitochondrial Xpo1 PF08389.12 BAM41211.1 - 1.5e-05 25.1 1.2 1.5e-05 25.1 1.2 5.1 5 0 0 5 5 5 1 Exportin 1-like protein TFIIB PF00382.19 BAM41212.1 - 5.1e-25 87.3 0.1 2e-12 47.0 0.0 2.4 2 0 0 2 2 2 2 Transcription factor TFIIB repeat BRF1 PF07741.13 BAM41212.1 - 2.7e-12 46.9 0.2 7.6e-12 45.5 0.2 1.8 1 0 0 1 1 1 1 Brf1-like TBP-binding domain TF_Zn_Ribbon PF08271.12 BAM41212.1 - 3.9e-06 26.3 0.2 8.7e-06 25.2 0.2 1.7 1 0 0 1 1 1 1 TFIIB zinc-binding A2L_zn_ribbon PF08792.10 BAM41212.1 - 0.0013 18.4 2.6 0.0047 16.6 2.3 2.1 2 0 0 2 2 2 1 A2L zinc ribbon domain ALIX_LYPXL_bnd PF13949.6 BAM41212.1 - 0.038 13.3 0.2 0.066 12.5 0.2 1.3 1 0 0 1 1 1 0 ALIX V-shaped domain binding to HIV YhfH PF14149.6 BAM41212.1 - 0.076 13.0 0.6 0.16 12.0 0.0 1.8 1 1 1 2 2 2 0 YhfH-like protein DZR PF12773.7 BAM41212.1 - 0.097 12.7 0.6 0.27 11.3 0.6 1.7 1 0 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.6 BAM41212.1 - 0.12 12.1 1.0 3.1 7.6 0.0 2.7 2 0 0 2 2 2 0 zinc-ribbon domain FliJ PF02050.16 BAM41212.1 - 0.54 10.5 0.1 0.54 10.5 0.1 2.2 2 0 0 2 2 2 0 Flagellar FliJ protein E1-E2_ATPase PF00122.20 BAM41213.1 - 1.6e-21 76.6 0.3 6.6e-16 58.3 0.8 3.5 3 1 0 3 3 3 2 E1-E2 ATPase Hydrolase PF00702.26 BAM41213.1 - 1.2e-13 51.8 0.1 1.8e-06 28.4 0.0 3.3 2 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 BAM41213.1 - 0.0042 16.9 0.0 0.02 14.6 0.0 2.0 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase FAM199X PF15814.5 BAM41213.1 - 0.13 11.3 0.4 0.35 9.9 0.2 1.7 2 0 0 2 2 2 0 Protein family FAM199X MFS_1 PF07690.16 BAM41214.1 - 3.7e-18 65.6 21.3 3.7e-18 65.6 21.3 1.5 2 0 0 2 2 2 1 Major Facilitator Superfamily DUF3341 PF11821.8 BAM41214.1 - 0.48 10.1 13.0 0.45 10.2 0.3 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF3341) DEAD PF00270.29 BAM41215.1 - 3.2e-36 124.7 0.0 5.4e-36 124.0 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM41215.1 - 2.1e-26 92.4 0.2 6.9e-26 90.8 0.2 1.9 3 0 0 3 3 3 1 Helicase conserved C-terminal domain CMS1 PF14617.6 BAM41215.1 - 0.022 14.1 0.0 0.045 13.1 0.0 1.5 1 0 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit UTP25 PF06862.12 BAM41215.1 - 0.023 13.5 0.1 0.077 11.8 0.1 1.8 1 1 0 1 1 1 0 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 ResIII PF04851.15 BAM41215.1 - 0.038 14.0 0.0 0.067 13.2 0.0 1.3 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit PITH PF06201.13 BAM41216.1 - 9.5e-26 90.8 0.1 1.2e-25 90.5 0.1 1.1 1 0 0 1 1 1 1 PITH domain Ribosomal_L37ae PF01780.19 BAM41217.1 - 1.9e-37 127.2 6.0 2.2e-37 127.0 6.0 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family Zn_Tnp_IS1595 PF12760.7 BAM41217.1 - 0.00014 21.7 3.0 0.00021 21.2 3.0 1.2 1 0 0 1 1 1 1 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 BAM41217.1 - 0.0053 16.6 0.7 0.0086 16.0 0.7 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Lar_restr_allev PF14354.6 BAM41217.1 - 0.017 15.5 0.4 0.025 14.9 0.4 1.4 1 0 0 1 1 1 0 Restriction alleviation protein Lar Elf1 PF05129.13 BAM41217.1 - 0.053 13.6 1.0 0.099 12.7 1.0 1.6 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like Rep_fac-A_C PF08646.10 BAM41217.1 - 0.1 12.4 0.8 0.13 12.0 0.8 1.3 1 1 0 1 1 1 0 Replication factor-A C terminal domain zf-BED PF02892.15 BAM41217.1 - 0.42 10.7 2.7 12 6.0 0.5 2.3 1 1 1 2 2 2 0 BED zinc finger MRNIP PF15749.5 BAM41217.1 - 0.52 11.0 4.6 1.2 9.9 2.0 2.1 1 1 1 2 2 2 0 MRN-interacting protein SecE PF00584.20 BAM41218.1 - 2.3e-13 49.9 0.0 2.8e-13 49.5 0.0 1.2 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex Sec20 PF03908.13 BAM41218.1 - 0.17 11.8 0.0 0.22 11.4 0.0 1.1 1 0 0 1 1 1 0 Sec20 SNF PF00209.18 BAM41219.1 - 1.4e-17 63.6 31.3 1.4e-17 63.6 31.3 1.9 2 0 0 2 2 2 1 Sodium:neurotransmitter symporter family MCPsignal PF00015.21 BAM41222.1 - 0.054 13.3 1.7 0.16 11.7 1.7 1.8 1 0 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Period_C PF12114.8 BAM41222.1 - 2.9 7.4 8.7 0.76 9.3 2.3 2.9 2 0 0 2 2 2 0 Period protein 2/3C-terminal region NAD_kinase PF01513.21 BAM41223.1 - 6.6e-60 202.8 0.1 8.8e-60 202.4 0.1 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 BAM41223.1 - 0.00021 20.9 0.0 0.00054 19.6 0.0 1.7 1 0 0 1 1 1 1 Diacylglycerol kinase catalytic domain DUF5055 PF16478.5 BAM41223.1 - 0.014 15.6 0.2 0.042 14.1 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF5055) YgbB PF02542.16 BAM41224.1 - 8.2e-50 169.1 0.0 9.9e-50 168.8 0.0 1.1 1 0 0 1 1 1 1 YgbB family DUF452 PF04301.13 BAM41225.1 - 0.01 15.4 0.0 0.015 14.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF452) DUF2039 PF10217.9 BAM41225.1 - 0.14 12.6 2.2 0.31 11.4 2.2 1.5 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2039) zf-RING_2 PF13639.6 BAM41225.1 - 0.14 12.5 1.6 0.53 10.7 1.6 1.9 1 1 0 1 1 1 0 Ring finger domain DUF4460 PF14687.6 BAM41226.1 - 0.024 14.7 0.2 0.053 13.6 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4460) Hydrolase_4 PF12146.8 BAM41227.1 - 3e-14 52.9 0.0 2.7e-09 36.6 0.0 2.1 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 BAM41227.1 - 9.3e-11 41.9 0.3 1e-05 25.3 0.0 2.1 1 1 1 2 2 2 2 alpha/beta hydrolase fold DUF818 PF05677.12 BAM41227.1 - 9.9e-08 31.3 0.8 1.4e-05 24.3 0.4 2.1 2 0 0 2 2 2 2 Chlamydia CHLPS protein (DUF818) Abhydrolase_6 PF12697.7 BAM41227.1 - 0.00018 22.2 0.0 0.1 13.2 0.0 2.1 1 1 1 2 2 2 2 Alpha/beta hydrolase family DUF1057 PF06342.12 BAM41227.1 - 0.00024 20.2 0.4 0.0016 17.6 0.1 1.9 1 1 1 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF1057) Abhydrolase_2 PF02230.16 BAM41227.1 - 0.00031 20.6 0.0 0.00083 19.2 0.0 1.7 1 1 0 1 1 1 1 Phospholipase/Carboxylesterase FSH1 PF03959.13 BAM41227.1 - 0.00034 20.3 0.0 0.00059 19.5 0.0 1.3 1 0 0 1 1 1 1 Serine hydrolase (FSH1) BAAT_C PF08840.11 BAM41227.1 - 0.0017 18.3 0.0 2.3 8.1 0.0 2.2 2 0 0 2 2 2 2 BAAT / Acyl-CoA thioester hydrolase C terminal Ser_hydrolase PF06821.13 BAM41227.1 - 0.0043 16.9 0.0 0.007 16.2 0.0 1.2 1 0 0 1 1 1 1 Serine hydrolase Peptidase_S9 PF00326.21 BAM41227.1 - 0.014 14.8 0.0 0.11 11.9 0.0 2.1 1 1 0 1 1 1 0 Prolyl oligopeptidase family Asp2 PF16929.5 BAM41227.1 - 0.12 11.3 0.1 0.18 10.8 0.1 1.1 1 0 0 1 1 1 0 Accessory Sec system GspB-transporter DLH PF01738.18 BAM41227.1 - 0.13 11.8 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 Dienelactone hydrolase family TBD PF12845.7 BAM41228.1 - 0.46 10.4 4.1 9.2 6.2 0.7 2.9 2 0 0 2 2 2 0 TBD domain Mito_carr PF00153.27 BAM41229.1 - 6e-27 93.4 0.3 2.9e-18 65.6 0.0 2.1 2 0 0 2 2 2 2 Mitochondrial carrier protein Peptidase_C1 PF00112.23 BAM41232.1 - 2.8e-31 109.3 1.3 9.4e-26 91.2 2.3 2.9 2 1 0 2 2 2 2 Papain family cysteine protease CathepsinC_exc PF08773.11 BAM41232.1 - 8.8e-07 29.2 0.3 1.7e-06 28.3 0.3 1.5 1 0 0 1 1 1 1 Cathepsin C exclusion domain Peptidase_C1_2 PF03051.15 BAM41232.1 - 1.3e-05 24.2 0.2 0.00013 20.9 0.0 2.0 2 0 0 2 2 2 1 Peptidase C1-like family TcpA PF05946.12 BAM41233.1 - 0.086 13.0 0.1 0.12 12.5 0.1 1.1 1 0 0 1 1 1 0 Toxin-coregulated pilus subunit TcpA Peptidase_M61_N PF17899.1 BAM41235.1 - 0.0039 17.3 0.1 0.0055 16.8 0.1 1.2 1 0 0 1 1 1 1 Peptidase M61 N-terminal domain SDF PF00375.18 BAM41235.1 - 0.011 14.8 0.2 0.012 14.6 0.2 1.2 1 0 0 1 1 1 0 Sodium:dicarboxylate symporter family DUF3913 PF13052.6 BAM41235.1 - 0.084 13.1 0.3 0.24 11.7 0.3 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3913) DUF2603 PF10788.9 BAM41237.1 - 0.031 14.3 0.1 0.21 11.6 0.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2603) RNA_GG_bind PF10258.9 BAM41238.1 - 4.2e-21 74.8 0.4 4.2e-21 74.8 0.4 1.8 2 0 0 2 2 2 1 PHAX RNA-binding domain CAMSAP_CH PF11971.8 BAM41238.1 - 0.099 12.5 0.2 0.16 11.9 0.2 1.3 1 0 0 1 1 1 0 CAMSAP CH domain Pro_isomerase PF00160.21 BAM41239.1 - 1.7e-48 164.9 0.1 3e-47 160.8 0.1 1.9 1 1 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Sld7_N PF18636.1 BAM41239.1 - 0.03 14.7 0.0 0.048 14.0 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial morphogenesis protein SLD7 N-terminal domain WD40 PF00400.32 BAM41240.1 - 9.7e-06 26.2 0.3 1.5 9.8 0.0 4.4 4 0 0 4 4 4 2 WD domain, G-beta repeat BBS2_Mid PF14783.6 BAM41240.1 - 0.01 15.9 0.0 1.2 9.2 0.0 2.4 2 0 0 2 2 2 0 Ciliary BBSome complex subunit 2, middle region ANAPC4_WD40 PF12894.7 BAM41240.1 - 0.029 14.6 0.3 0.074 13.3 0.0 1.9 2 0 0 2 2 2 0 Anaphase-promoting complex subunit 4 WD40 domain FCP1_C PF09309.10 BAM41240.1 - 0.049 13.5 1.7 0.096 12.5 1.7 1.4 1 0 0 1 1 1 0 FCP1, C-terminal Benyvirus_14KDa PF07255.11 BAM41240.1 - 0.61 10.3 4.0 0.44 10.8 0.8 2.3 2 1 1 3 3 3 0 Benyvirus 14KDa protein BT1 PF03092.16 BAM41241.1 - 1.9e-42 145.2 17.3 1.3e-22 79.8 1.2 2.0 2 0 0 2 2 2 2 BT1 family MFS_1 PF07690.16 BAM41241.1 - 1e-13 51.0 24.1 1.2e-13 50.8 22.6 1.8 1 1 0 1 1 1 1 Major Facilitator Superfamily MFS_2 PF13347.6 BAM41241.1 - 1.1e-08 34.1 18.0 1.1e-08 34.1 18.0 2.5 1 1 1 2 2 2 1 MFS/sugar transport protein MFS_1_like PF12832.7 BAM41241.1 - 7.2e-06 25.1 15.9 7.2e-06 25.1 15.9 1.7 1 1 1 2 2 2 1 MFS_1 like family PUCC PF03209.15 BAM41241.1 - 0.14 11.2 6.9 0.031 13.3 2.2 2.4 2 1 1 3 3 3 0 PUCC protein BT1 PF03092.16 BAM41242.1 - 3.8e-46 157.4 19.1 9.4e-25 86.8 3.1 2.1 2 0 0 2 2 2 2 BT1 family MFS_1 PF07690.16 BAM41242.1 - 1.3e-12 47.4 27.2 1.3e-12 47.4 27.2 1.8 2 0 0 2 2 2 1 Major Facilitator Superfamily PUCC PF03209.15 BAM41242.1 - 0.031 13.3 7.6 0.089 11.8 6.4 2.1 1 1 0 1 1 1 0 PUCC protein SPOB_ab PF14682.6 BAM41242.1 - 0.14 12.2 0.0 0.26 11.4 0.0 1.4 1 0 0 1 1 1 0 Sporulation initiation phospho-transferase B, C-terminal DUF676 PF05057.14 BAM41243.1 - 3.7e-11 43.0 0.0 1e-10 41.5 0.0 1.7 1 1 0 1 1 1 1 Putative serine esterase (DUF676) Palm_thioest PF02089.15 BAM41243.1 - 0.0002 21.3 0.0 0.00063 19.7 0.0 1.9 2 0 0 2 2 2 1 Palmitoyl protein thioesterase PGAP1 PF07819.13 BAM41243.1 - 0.0031 17.3 0.0 0.01 15.6 0.0 1.9 1 1 0 1 1 1 1 PGAP1-like protein LCAT PF02450.15 BAM41243.1 - 0.051 12.7 0.0 0.081 12.1 0.0 1.3 1 0 0 1 1 1 0 Lecithin:cholesterol acyltransferase MSL2-CXC PF16682.5 BAM41243.1 - 7.8 6.7 12.6 0.56 10.4 6.6 2.1 2 0 0 2 2 2 0 CXC domain of E3 ubiquitin-protein ligase MSL2 PGI PF00342.19 BAM41244.1 - 2.8e-159 530.8 0.0 3.5e-159 530.5 0.0 1.0 1 0 0 1 1 1 1 Phosphoglucose isomerase FAINT PF04385.15 BAM41245.1 - 0.019 15.0 0.4 0.034 14.2 0.4 1.4 1 0 0 1 1 1 0 Domain of unknown function, DUF529 WGG PF10273.9 BAM41246.1 - 2.3e-16 60.2 0.2 4.4e-16 59.3 0.2 1.4 1 0 0 1 1 1 1 Pre-rRNA-processing protein TSR2 PIG-U PF06728.13 BAM41246.1 - 8.7e-07 28.3 29.1 1.8e-06 27.2 27.4 2.1 1 1 0 1 1 1 1 GPI transamidase subunit PIG-U ER_lumen_recept PF00810.18 BAM41247.1 - 4e-34 118.6 6.7 4e-34 118.6 6.7 2.6 3 0 0 3 3 3 1 ER lumen protein retaining receptor DUF3989 PF13150.6 BAM41247.1 - 0.016 15.0 0.1 0.042 13.6 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3989) CLTH PF10607.9 BAM41248.1 - 6.3e-23 81.3 1.5 6.3e-23 81.3 1.5 2.4 2 0 0 2 2 2 1 CTLH/CRA C-terminal to LisH motif domain LisH_2 PF16045.5 BAM41248.1 - 0.0016 17.5 0.0 0.0036 16.3 0.0 1.7 1 0 0 1 1 1 1 LisH TniQ PF06527.11 BAM41248.1 - 0.026 15.3 0.0 0.056 14.2 0.0 1.6 1 0 0 1 1 1 0 TniQ Baculo_PEP_C PF04513.12 BAM41248.1 - 0.31 11.1 6.0 0.34 11.0 0.1 2.7 2 2 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus MFS_1 PF07690.16 BAM41249.1 - 7e-22 77.8 12.3 1.4e-21 76.8 12.2 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 BAM41249.1 - 7e-14 51.5 26.5 8e-14 51.3 5.2 2.2 2 0 0 2 2 2 2 Sugar (and other) transporter OATP PF03137.20 BAM41249.1 - 2e-09 36.3 27.2 8.6e-08 30.9 10.5 4.2 1 1 2 3 3 3 3 Organic Anion Transporter Polypeptide (OATP) family MFS_4 PF06779.14 BAM41249.1 - 0.0044 16.4 2.9 0.0044 16.4 2.9 2.2 2 1 1 3 3 3 1 Uncharacterised MFS-type transporter YbfB MFS_1 PF07690.16 BAM41250.1 - 1.3e-21 76.9 21.3 1.5e-19 70.2 0.9 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 BAM41250.1 - 1.3e-14 53.9 24.6 5.4e-14 51.9 11.3 2.2 2 0 0 2 2 2 2 Sugar (and other) transporter OATP PF03137.20 BAM41250.1 - 5.4e-05 21.7 18.4 0.00062 18.2 0.3 3.2 2 1 1 3 3 3 3 Organic Anion Transporter Polypeptide (OATP) family DUF2516 PF10724.9 BAM41250.1 - 0.015 15.6 0.8 6.8 7.0 0.3 3.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2516) DUF5345 PF17280.2 BAM41250.1 - 0.87 9.6 3.2 2.7 8.0 3.2 1.9 1 0 0 1 1 1 0 Family of unknown function (DUF5345) LapA_dom PF06305.11 BAM41250.1 - 2.2 8.1 6.6 3.4 7.5 0.1 2.9 2 0 0 2 2 2 0 Lipopolysaccharide assembly protein A domain MFS_1 PF07690.16 BAM41251.1 - 2.7e-14 52.9 43.6 7.5e-14 51.4 17.5 2.8 1 1 0 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 BAM41251.1 - 3.8e-12 45.8 9.1 3.8e-12 45.8 9.1 2.5 3 0 0 3 3 3 2 Sugar (and other) transporter OATP PF03137.20 BAM41251.1 - 0.00015 20.2 32.1 0.0092 14.3 0.9 4.2 2 2 2 4 4 4 4 Organic Anion Transporter Polypeptide (OATP) family DUF2516 PF10724.9 BAM41251.1 - 0.7 10.2 6.7 4.9 7.5 1.3 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2516) MFS_1 PF07690.16 BAM41252.1 - 8.1e-47 159.8 48.8 8.2e-27 94.0 13.9 4.3 2 1 3 5 5 5 4 Major Facilitator Superfamily Sugar_tr PF00083.24 BAM41252.1 - 7e-19 68.0 38.0 1.9e-11 43.5 13.2 4.4 4 1 0 4 4 4 2 Sugar (and other) transporter OATP PF03137.20 BAM41252.1 - 3e-14 52.2 61.6 1.8e-07 29.9 10.8 7.3 2 2 4 7 7 7 6 Organic Anion Transporter Polypeptide (OATP) family MFS_4 PF06779.14 BAM41252.1 - 2.1e-05 24.0 17.8 0.00034 20.0 0.9 2.9 3 0 0 3 3 3 2 Uncharacterised MFS-type transporter YbfB DUF562 PF04763.12 BAM41252.1 - 0.028 13.9 0.9 0.73 9.3 0.4 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF562) DUF2374 PF09574.10 BAM41252.1 - 0.043 13.7 5.7 0.62 9.9 0.2 3.1 2 0 0 2 2 2 0 Protein of unknown function (Duf2374) MPC PF03650.13 BAM41252.1 - 0.58 10.3 2.9 1.3 9.2 0.3 2.8 2 0 0 2 2 2 0 Mitochondrial pyruvate carriers Arf PF00025.21 BAM41254.1 - 4.1e-20 72.0 0.2 9.9e-20 70.7 0.2 1.6 1 1 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 BAM41254.1 - 8e-05 22.7 0.1 0.00025 21.1 0.1 1.8 2 1 0 2 2 2 1 50S ribosome-binding GTPase cobW PF02492.19 BAM41254.1 - 0.00067 19.3 0.2 1.1 8.8 0.1 2.2 2 0 0 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 BAM41254.1 - 0.001 19.5 0.0 0.0018 18.7 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain SRPRB PF09439.10 BAM41254.1 - 0.0023 17.4 0.1 0.0046 16.4 0.1 1.4 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit AAA_18 PF13238.6 BAM41254.1 - 0.0066 17.0 0.1 0.013 16.1 0.1 1.7 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 BAM41254.1 - 0.008 15.2 0.0 0.44 9.5 0.0 2.2 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB RsgA_GTPase PF03193.16 BAM41254.1 - 0.058 13.3 0.1 5.4 6.9 0.0 2.3 2 1 0 2 2 2 0 RsgA GTPase NOG1 PF06858.14 BAM41254.1 - 0.073 12.9 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 Nucleolar GTP-binding protein 1 (NOG1) FeoB_N PF02421.18 BAM41254.1 - 0.11 12.0 0.7 0.55 9.7 0.7 2.0 1 1 0 1 1 1 0 Ferrous iron transport protein B Zeta_toxin PF06414.12 BAM41254.1 - 0.17 11.1 0.0 0.32 10.3 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin FtsK_SpoIIIE PF01580.18 BAM41254.1 - 0.17 11.2 0.1 14 4.9 0.0 2.7 3 0 0 3 3 3 0 FtsK/SpoIIIE family RRM_1 PF00076.22 BAM41256.1 - 1.2e-13 50.6 0.1 2.1e-13 49.9 0.1 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) XS PF03468.14 BAM41256.1 - 0.12 12.7 2.2 0.81 10.0 2.1 2.2 1 1 1 2 2 2 0 XS domain UQ_con PF00179.26 BAM41257.1 - 9.2e-47 158.2 0.1 5.9e-46 155.6 0.1 1.8 1 1 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 BAM41257.1 - 0.033 13.9 0.0 0.1 12.3 0.0 1.8 1 1 0 1 1 1 0 Prokaryotic E2 family B DNA_pol_P_Exo PF18049.1 BAM41257.1 - 0.084 12.3 0.0 0.11 11.9 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase nu pseudo-exo Nudc_N PF14050.6 BAM41258.1 - 6.6e-16 58.1 1.7 1.1e-15 57.3 1.7 1.4 1 0 0 1 1 1 1 N-terminal conserved domain of Nudc. CS PF04969.16 BAM41258.1 - 7e-14 52.6 1.4 1.2e-13 51.9 1.4 1.4 1 0 0 1 1 1 1 CS domain PHM7_cyt PF14703.6 BAM41259.1 - 0.00028 21.1 0.4 0.24 11.6 0.1 2.6 2 1 1 3 3 3 2 Cytosolic domain of 10TM putative phosphate transporter RRM_1 PF00076.22 BAM41259.1 - 0.034 14.0 0.1 0.14 12.0 0.0 2.0 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Protoglobin PF11563.8 BAM41259.1 - 0.1 12.5 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Protoglobin MHC2-interact PF09307.10 BAM41259.1 - 0.18 11.8 0.2 0.46 10.5 0.2 1.6 1 0 0 1 1 1 0 CLIP, MHC2 interacting DUF4818 PF16089.5 BAM41259.1 - 0.28 11.7 3.8 3.4 8.2 0.7 3.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4818) DUF485 PF04341.12 BAM41259.1 - 6 6.9 9.8 0.26 11.2 0.4 3.5 3 0 0 3 3 3 0 Protein of unknown function, DUF485 Zip PF02535.22 BAM41260.1 - 0.33 10.1 0.5 0.38 9.9 0.5 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter ArfGap PF01412.18 BAM41260.1 - 2.7 8.1 7.3 13 5.9 7.3 2.2 1 1 0 1 1 1 0 Putative GTPase activating protein for Arf ApoA-II PF04711.13 BAM41261.1 - 1 9.6 0.0 1 9.6 0.0 3.4 4 0 0 4 4 4 0 Apolipoprotein A-II (ApoA-II) RPA_C PF08784.11 BAM41261.1 - 2.4 8.9 7.8 16 6.2 0.7 2.8 2 0 0 2 2 2 0 Replication protein A C terminal Ribosomal_L12_N PF16320.5 BAM41262.1 - 1.7e-13 50.0 0.2 3.9e-13 48.9 0.2 1.7 1 0 0 1 1 1 1 Ribosomal protein L7/L12 dimerisation domain Ribosomal_L12 PF00542.19 BAM41262.1 - 5.6e-07 29.8 1.6 9.5e-07 29.1 0.2 1.9 2 0 0 2 2 2 1 Ribosomal protein L7/L12 C-terminal domain DUF3847 PF12958.7 BAM41262.1 - 0.028 14.5 0.1 0.028 14.5 0.1 2.2 4 0 0 4 4 4 0 Protein of unknown function (DUF3847) Raptor_N PF14538.6 BAM41263.1 - 0.045 13.7 0.2 0.23 11.4 0.2 2.1 1 1 0 1 1 1 0 Raptor N-terminal CASPase like domain Spidroin_MaSp PF11260.8 BAM41263.1 - 0.13 12.6 3.7 0.49 10.7 0.7 3.0 2 0 0 2 2 2 0 Major ampullate spidroin 1 and 2 APG6_N PF17675.1 BAM41264.1 - 0.2 12.2 8.7 0.11 13.0 0.9 2.6 2 1 0 3 3 3 0 Apg6 coiled-coil region DUF2730 PF10805.8 BAM41264.1 - 0.32 11.1 3.4 0.29 11.3 1.0 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF2730) CS PF04969.16 BAM41265.1 - 2.8e-08 34.7 3.1 3.4e-08 34.4 1.7 1.8 2 0 0 2 2 2 1 CS domain DnaJ PF00226.31 BAM41266.1 - 0.026 14.7 1.5 0.13 12.4 0.7 2.7 2 0 0 2 2 2 0 DnaJ domain CSTF2_hinge PF14327.6 BAM41266.1 - 0.19 12.2 3.1 0.44 11.0 1.6 2.4 2 0 0 2 2 2 0 Hinge domain of cleavage stimulation factor subunit 2 HSCB_C PF07743.13 BAM41266.1 - 1.4 9.5 29.4 0.03 14.8 6.2 6.3 5 2 1 6 6 6 0 HSCB C-terminal oligomerisation domain Peptidase_C10 PF01640.17 BAM41266.1 - 4.2 7.6 6.7 0.61 10.4 0.6 2.6 2 1 0 2 2 2 0 Peptidase C10 family Biotin_lipoyl PF00364.22 BAM41267.1 - 4.7e-12 45.6 0.3 8.4e-12 44.8 0.3 1.4 1 0 0 1 1 1 1 Biotin-requiring enzyme Aldo_ket_red PF00248.21 BAM41268.1 - 3.3e-57 193.9 0.0 5.7e-57 193.1 0.0 1.3 1 0 0 1 1 1 1 Aldo/keto reductase family Citrate_synt PF00285.21 BAM41269.1 - 7.8e-18 64.7 0.0 4.1e-16 59.0 0.0 2.5 1 1 0 1 1 1 1 Citrate synthase, C-terminal domain LEM PF03020.15 BAM41269.1 - 0.14 11.8 0.1 0.29 10.7 0.1 1.5 1 0 0 1 1 1 0 LEM domain RRM_1 PF00076.22 BAM41271.1 - 5.6e-05 22.9 0.0 0.00012 21.8 0.0 1.5 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Pkinase PF00069.25 BAM41272.1 - 1.4e-28 100.1 0.0 1.8e-28 99.7 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM41272.1 - 1e-16 61.0 0.0 1.3e-16 60.7 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 BAM41272.1 - 7.7e-09 34.8 0.1 1e-08 34.4 0.1 1.2 1 0 0 1 1 1 1 Fungal protein kinase APH PF01636.23 BAM41272.1 - 8.2e-05 22.6 0.0 0.0014 18.6 0.0 2.2 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 BAM41272.1 - 0.015 14.3 0.2 0.015 14.3 0.2 1.6 2 0 0 2 2 2 0 Poxvirus serine/threonine protein kinase SMC_N PF02463.19 BAM41273.1 - 2.1e-29 102.6 65.0 6.9e-28 97.6 65.0 2.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain SMC_hinge PF06470.13 BAM41273.1 - 1.3e-22 80.3 0.1 5e-22 78.4 0.1 2.2 1 0 0 1 1 1 1 SMC proteins Flexible Hinge Domain AAA_21 PF13304.6 BAM41273.1 - 4.7e-13 49.6 1.1 6.3e-09 36.1 0.1 4.2 5 0 0 5 5 5 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 BAM41273.1 - 2.4e-09 37.4 20.4 2.4e-09 37.4 20.4 5.6 1 1 3 5 5 5 2 AAA ATPase domain AAA_23 PF13476.6 BAM41273.1 - 3.2e-09 37.6 20.2 3.2e-09 37.6 20.2 7.9 2 2 1 3 3 3 1 AAA domain AAA_29 PF13555.6 BAM41273.1 - 0.0032 17.2 0.0 0.011 15.5 0.0 2.0 1 0 0 1 1 1 1 P-loop containing region of AAA domain SbcCD_C PF13558.6 BAM41273.1 - 0.0073 16.5 0.0 0.064 13.5 0.0 2.8 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit BSD PF03909.17 BAM41273.1 - 0.33 11.0 3.1 13 5.9 0.0 4.4 3 0 0 3 3 3 0 BSD domain FAINT PF04385.15 BAM41276.1 - 1.8e-09 37.5 6.8 6.6e-06 26.1 1.0 2.5 2 0 0 2 2 2 2 Domain of unknown function, DUF529 Bac_A_amyl_C PF18612.1 BAM41276.1 - 0.059 13.1 0.1 0.16 11.7 0.1 1.7 1 0 0 1 1 1 0 Bacterial Alpha amylase C-terminal domain Methyltransf_8 PF05148.15 BAM41277.1 - 6.3e-74 248.5 0.1 8.1e-74 248.2 0.1 1.1 1 0 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_11 PF08241.12 BAM41277.1 - 0.00057 20.5 0.1 0.0048 17.5 0.1 2.3 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 BAM41277.1 - 0.021 15.5 0.0 0.3 11.8 0.0 2.3 1 1 1 2 2 2 0 Methyltransferase domain MTS PF05175.14 BAM41277.1 - 0.064 12.8 0.0 1.3 8.5 0.0 2.2 1 1 1 2 2 2 0 Methyltransferase small domain Ubie_methyltran PF01209.18 BAM41277.1 - 0.07 12.5 0.0 0.11 11.9 0.0 1.3 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Elong-fact-P_C PF09285.11 BAM41278.1 - 2.8e-08 33.4 0.0 7.3e-08 32.0 0.0 1.7 1 0 0 1 1 1 1 Elongation factor P, C-terminal EFP_N PF08207.12 BAM41278.1 - 0.00067 19.6 0.1 0.0011 19.0 0.1 1.4 1 0 0 1 1 1 1 Elongation factor P (EF-P) KOW-like domain MetallophosN PF16371.5 BAM41278.1 - 0.016 15.5 0.1 0.042 14.1 0.1 1.8 1 0 0 1 1 1 0 N terminal of Calcineurin-like phosphoesterase RsgA_N PF16745.5 BAM41278.1 - 0.14 12.0 0.0 0.29 10.9 0.0 1.5 1 0 0 1 1 1 0 RsgA N-terminal domain Asp PF00026.23 BAM41279.1 - 7.5e-58 196.4 0.0 9.4e-58 196.1 0.0 1.1 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 BAM41279.1 - 9.9e-08 32.4 3.2 1.2e-05 25.6 0.4 3.2 2 1 0 2 2 2 1 Xylanase inhibitor N-terminal IF2_N PF04760.15 BAM41280.1 - 0.05 13.4 0.5 6.9 6.6 0.2 3.2 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region TMEM252 PF15664.5 BAM41280.1 - 0.053 13.2 0.4 0.14 11.9 0.4 1.7 1 0 0 1 1 1 0 Transmembrane protein 252 family PocR PF10114.9 BAM41280.1 - 0.15 11.9 1.2 0.42 10.4 0.1 2.4 2 0 0 2 2 2 0 Sensory domain found in PocR Hydin_ADK PF17213.3 BAM41280.1 - 3.1 8.0 4.5 7.3 6.8 4.4 1.8 1 1 0 1 1 1 0 Hydin Adenylate kinase-like domain Arv1 PF04161.13 BAM41281.1 - 6.8e-23 81.9 14.8 2.8e-21 76.7 14.8 2.4 1 1 0 1 1 1 1 Arv1-like family RF-1 PF00472.20 BAM41282.1 - 2.1e-27 95.3 2.3 3.4e-27 94.7 2.3 1.3 1 0 0 1 1 1 1 RF-1 domain PCRF PF03462.18 BAM41282.1 - 6e-18 65.4 1.2 1e-16 61.4 0.2 3.0 2 1 0 2 2 2 1 PCRF domain PAS_10 PF13596.6 BAM41282.1 - 0.07 13.7 1.6 0.22 12.1 0.1 2.4 2 1 0 2 2 2 0 PAS domain Ribosomal_S6 PF01250.17 BAM41283.1 - 1.4e-08 34.9 0.6 5.4e-08 33.0 0.1 2.1 2 0 0 2 2 2 1 Ribosomal protein S6 FemAB_like PF04339.12 BAM41283.1 - 0.092 11.9 0.6 0.13 11.3 0.6 1.2 1 0 0 1 1 1 0 Peptidogalycan biosysnthesis/recognition SEP PF08059.13 BAM41284.1 - 1.6e-18 67.0 0.1 2.7e-18 66.3 0.1 1.3 1 0 0 1 1 1 1 SEP domain UBX PF00789.20 BAM41284.1 - 9.2e-06 25.8 0.0 3.1e-05 24.1 0.0 1.8 2 0 0 2 2 2 1 UBX domain CNV-Replicase_N PF16688.5 BAM41286.1 - 0.074 13.4 0.2 0.19 12.1 0.2 1.6 1 0 0 1 1 1 0 Replicase polyprotein N-term from Coronavirus nsp1 CRR7 PF12095.8 BAM41286.1 - 0.18 12.3 2.1 0.77 10.3 2.1 2.1 1 0 0 1 1 1 0 Protein CHLORORESPIRATORY REDUCTION 7 Pkinase PF00069.25 BAM41287.1 - 3.5e-31 108.5 0.0 2.1e-25 89.6 0.0 2.3 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 BAM41287.1 - 3.5e-22 78.9 0.0 1.9e-15 56.8 0.0 2.2 2 0 0 2 2 2 2 Protein tyrosine kinase Kinase-like PF14531.6 BAM41287.1 - 0.0024 17.3 0.0 0.0043 16.4 0.0 1.3 1 0 0 1 1 1 1 Kinase-like APH PF01636.23 BAM41287.1 - 0.058 13.3 0.0 0.11 12.4 0.0 1.4 1 0 0 1 1 1 0 Phosphotransferase enzyme family zf-CCCH PF00642.24 BAM41289.1 - 1.1e-10 41.1 13.8 1.6e-05 24.6 4.4 2.5 2 0 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 BAM41289.1 - 6.3e-06 26.1 15.1 0.0022 18.0 5.3 2.7 2 0 0 2 2 2 2 Zinc finger domain Torus PF16131.5 BAM41289.1 - 5.6e-05 23.8 3.3 0.22 12.3 0.5 2.4 2 0 0 2 2 2 2 Torus domain RRM_1 PF00076.22 BAM41289.1 - 0.0013 18.5 0.0 0.0057 16.5 0.0 2.0 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Stealth_CR3 PF17102.5 BAM41289.1 - 0.0085 16.0 1.3 0.0085 16.0 1.3 2.0 2 1 0 2 2 2 1 Stealth protein CR3, conserved region 3 zf-CCCH_3 PF15663.5 BAM41289.1 - 0.0094 16.2 3.7 2 8.6 1.1 2.3 2 0 0 2 2 2 2 Zinc-finger containing family zf-CCCH_4 PF18044.1 BAM41289.1 - 0.19 11.6 15.2 0.89 9.4 6.5 2.6 2 0 0 2 2 2 0 CCCH-type zinc finger Proteasome PF00227.26 BAM41290.1 - 1.2e-32 112.9 0.0 2.7e-32 111.8 0.0 1.6 1 1 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 BAM41290.1 - 4.2e-14 51.9 0.1 7.4e-14 51.1 0.1 1.4 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature zf-4CXXC_R1 PF10497.9 BAM41290.1 - 0.094 13.0 0.4 0.094 13.0 0.4 1.6 2 0 0 2 2 2 0 Zinc-finger domain of monoamine-oxidase A repressor R1 PROCN PF08083.11 BAM41291.1 - 6.6e-227 752.9 7.0 1.1e-226 752.3 7.0 1.3 1 0 0 1 1 1 1 PROCN (NUC071) domain PRP8_domainIV PF12134.8 BAM41291.1 - 2.8e-123 409.9 1.0 4.6e-123 409.2 1.0 1.3 1 0 0 1 1 1 1 PRP8 domain IV core U6-snRNA_bdg PF10596.9 BAM41291.1 - 9.2e-89 295.4 2.9 2.2e-88 294.2 2.9 1.7 1 0 0 1 1 1 1 U6-snRNA interacting domain of PrP8 PRO8NT PF08082.11 BAM41291.1 - 5.2e-85 283.0 3.2 1.6e-84 281.4 3.2 1.9 1 0 0 1 1 1 1 PRO8NT (NUC069), PrP8 N-terminal domain U5_2-snRNA_bdg PF10597.9 BAM41291.1 - 5.7e-71 236.8 0.1 1.1e-70 235.9 0.1 1.5 1 0 0 1 1 1 1 U5-snRNA binding site 2 of PrP8 RRM_4 PF10598.9 BAM41291.1 - 3.5e-43 145.8 0.2 8.9e-43 144.5 0.2 1.7 1 0 0 1 1 1 1 RNA recognition motif of the spliceosomal PrP8 PROCT PF08084.11 BAM41291.1 - 1.8e-27 95.7 1.4 4.4e-26 91.2 1.4 2.6 1 1 0 1 1 1 1 PROCT (NUC072) domain EamA PF00892.20 BAM41292.1 - 1.5e-09 38.2 19.5 1.6e-08 34.8 10.1 2.1 2 0 0 2 2 2 2 EamA-like transporter family AAA PF00004.29 BAM41294.1 - 9.2e-12 45.5 0.0 1.6e-11 44.7 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) RWP-RK PF02042.15 BAM41294.1 - 0.06 13.3 0.7 0.4 10.7 0.1 2.5 3 0 0 3 3 3 0 RWP-RK domain MMR_HSR1 PF01926.23 BAM41295.1 - 7.9e-21 74.3 0.0 1.8e-19 69.9 0.0 2.4 2 0 0 2 2 2 1 50S ribosome-binding GTPase KH_dom-like PF14714.6 BAM41295.1 - 1.9e-20 73.0 0.0 1.6e-19 70.0 0.0 2.4 2 0 0 2 2 2 1 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RsgA_GTPase PF03193.16 BAM41295.1 - 2.8e-05 24.1 0.2 0.0031 17.5 0.1 2.3 2 0 0 2 2 2 1 RsgA GTPase FeoB_N PF02421.18 BAM41295.1 - 0.00013 21.6 0.0 0.0005 19.6 0.0 2.0 2 0 0 2 2 2 1 Ferrous iron transport protein B AIG1 PF04548.16 BAM41295.1 - 0.005 16.2 0.1 0.0081 15.5 0.1 1.3 1 0 0 1 1 1 1 AIG1 family GTP_EFTU PF00009.27 BAM41295.1 - 0.01 15.4 0.0 5.7 6.4 0.0 2.5 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain Septin PF00735.18 BAM41295.1 - 0.095 12.0 0.0 0.15 11.3 0.0 1.3 1 0 0 1 1 1 0 Septin SRPRB PF09439.10 BAM41295.1 - 0.13 11.6 0.0 0.36 10.2 0.0 1.7 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit Sporozoite_P67 PF05642.11 BAM41296.1 - 4e-06 25.3 13.4 4e-06 25.3 13.4 11.1 2 2 5 8 8 8 1 Sporozoite P67 surface antigen DUF3933 PF13069.6 BAM41296.1 - 0.036 13.9 0.1 0.084 12.7 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3933) CENP-B_dimeris PF09026.10 BAM41296.1 - 1.5 9.3 23.3 4.4 7.8 23.3 1.8 1 0 0 1 1 1 0 Centromere protein B dimerisation domain DNA_pol_phi PF04931.13 BAM41296.1 - 3.6 5.6 17.9 6.4 4.8 17.9 1.3 1 0 0 1 1 1 0 DNA polymerase phi BolA PF01722.18 BAM41297.1 - 0.022 15.0 0.0 0.03 14.6 0.0 1.3 1 0 0 1 1 1 0 BolA-like protein Peptidase_C1 PF00112.23 BAM41298.1 - 1.2e-60 205.3 0.2 1.9e-60 204.7 0.2 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 BAM41298.1 - 3.3e-08 33.8 4.7 7.5e-08 32.7 4.7 1.7 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 BAM41298.1 - 2.6e-07 29.8 0.6 1.1e-05 24.4 0.1 2.2 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C1 PF00112.23 BAM41299.1 - 3.3e-48 164.7 0.1 5.4e-48 164.0 0.1 1.3 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 BAM41299.1 - 6e-08 33.0 8.6 6.8e-08 32.8 4.2 2.6 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1 PF00112.23 BAM41300.1 - 3.5e-58 197.3 0.1 6.4e-58 196.4 0.1 1.4 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 BAM41300.1 - 1.3e-11 44.8 3.5 2.7e-11 43.7 2.3 2.2 2 0 0 2 2 2 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 BAM41300.1 - 1.4e-07 30.7 0.7 2.6e-05 23.2 0.2 2.5 2 0 0 2 2 2 2 Peptidase C1-like family Peptidase_C1 PF00112.23 BAM41301.1 - 7e-56 189.7 0.0 1.2e-55 188.9 0.0 1.4 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 BAM41301.1 - 6e-08 33.0 2.1 1.8e-07 31.5 2.1 1.8 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 BAM41301.1 - 1.4e-06 27.4 0.2 4.1e-05 22.5 0.1 2.3 2 0 0 2 2 2 1 Peptidase C1-like family Tetraspanin PF00335.20 BAM41301.1 - 0.0009 19.0 0.1 0.0013 18.5 0.1 1.2 1 0 0 1 1 1 1 Tetraspanin family Dynamin_M PF01031.20 BAM41301.1 - 0.035 13.3 3.1 0.057 12.6 3.1 1.3 1 0 0 1 1 1 0 Dynamin central region Imm58 PF15581.6 BAM41301.1 - 0.085 13.0 0.1 0.21 11.7 0.1 1.6 1 0 0 1 1 1 0 Immunity protein 58 Insulin_TMD PF17870.1 BAM41301.1 - 0.33 11.0 1.8 0.66 10.1 1.8 1.5 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment GerD PF17898.1 BAM41301.1 - 0.43 10.5 2.1 0.84 9.6 0.8 2.1 2 1 0 2 2 2 0 Spore germination GerD central core domain Peptidase_C1 PF00112.23 BAM41302.1 - 3.6e-48 164.5 0.2 5.6e-48 163.9 0.2 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 BAM41302.1 - 2.6e-06 27.8 3.2 6.2e-06 26.5 3.2 1.7 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 BAM41302.1 - 0.00014 20.8 0.2 0.00079 18.3 0.0 1.9 2 0 0 2 2 2 1 Peptidase C1-like family NUC130_3NT PF08158.12 BAM41302.1 - 0.058 13.7 0.0 0.13 12.6 0.0 1.6 1 0 0 1 1 1 0 NUC130/3NT domain DUF1195 PF06708.11 BAM41302.1 - 0.077 12.8 0.1 0.19 11.5 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF1195) Peptidase_C1 PF00112.23 BAM41304.1 - 9.4e-62 208.9 1.8 1.3e-61 208.5 1.8 1.2 1 0 0 1 1 1 1 Papain family cysteine protease Inhibitor_I29 PF08246.12 BAM41304.1 - 1.8e-08 34.7 3.9 5.8e-08 33.1 3.9 1.9 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 BAM41304.1 - 0.00011 21.1 0.3 0.0057 15.5 0.1 2.3 2 0 0 2 2 2 1 Peptidase C1-like family DUF2063 PF09836.9 BAM41304.1 - 0.014 15.6 0.2 3.4 8.0 0.0 2.5 2 0 0 2 2 2 0 Putative DNA-binding domain Dynamin_M PF01031.20 BAM41304.1 - 0.041 13.1 0.5 0.063 12.5 0.5 1.2 1 0 0 1 1 1 0 Dynamin central region Stork_head PF10264.9 BAM41304.1 - 0.044 13.9 0.0 16 5.7 0.0 2.4 2 0 0 2 2 2 0 Winged helix Storkhead-box1 domain Gypsy PF07253.11 BAM41304.1 - 0.072 11.6 1.0 1 7.8 0.0 2.0 2 0 0 2 2 2 0 Gypsy protein DUF5316 PF17247.2 BAM41304.1 - 0.17 11.9 0.5 2.4 8.3 0.0 2.4 2 0 0 2 2 2 0 Family of unknown function (DUF5316) GTP_EFTU PF00009.27 BAM41305.1 - 3.2e-45 154.1 0.3 1.7e-44 151.7 0.1 2.0 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 BAM41305.1 - 9.2e-12 44.8 0.3 2.8e-11 43.3 0.3 1.9 1 0 0 1 1 1 1 Elongation factor G C-terminus MMR_HSR1 PF01926.23 BAM41305.1 - 3e-06 27.3 0.1 7.7e-06 26.0 0.1 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase EFG_II PF14492.6 BAM41305.1 - 0.00013 21.9 0.0 0.00045 20.3 0.0 2.0 2 0 0 2 2 2 1 Elongation Factor G, domain II FeoB_N PF02421.18 BAM41305.1 - 0.0033 17.0 1.3 0.013 15.1 0.1 2.6 2 1 0 2 2 2 1 Ferrous iron transport protein B TGS PF02824.21 BAM41305.1 - 0.01 15.8 0.2 0.062 13.4 0.0 2.3 2 0 0 2 2 2 0 TGS domain Septin PF00735.18 BAM41305.1 - 0.015 14.6 1.1 0.021 14.1 0.1 1.6 2 0 0 2 2 2 0 Septin GTP_EFTU_D2 PF03144.25 BAM41305.1 - 0.019 15.3 2.7 0.025 15.0 0.8 2.1 2 0 0 2 2 2 0 Elongation factor Tu domain 2 S4 PF01479.25 BAM41305.1 - 0.059 13.1 0.5 0.12 12.1 0.5 1.5 1 0 0 1 1 1 0 S4 domain ATP-synt_Eps PF04627.13 BAM41306.1 - 2.3e-15 56.3 0.3 2.9e-15 56.0 0.3 1.1 1 0 0 1 1 1 1 Mitochondrial ATP synthase epsilon chain MIF4G PF02854.19 BAM41308.1 - 9.8e-30 103.8 3.2 1.3e-29 103.4 3.2 1.2 1 0 0 1 1 1 1 MIF4G domain HigB_toxin PF09907.9 BAM41308.1 - 0.035 14.3 0.0 0.1 12.8 0.0 1.8 1 0 0 1 1 1 0 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system AHD PF17793.1 BAM41308.1 - 0.11 12.4 0.7 1.3 8.8 0.1 2.8 2 1 0 2 2 2 0 ANC1 homology domain (AHD) WD40 PF00400.32 BAM41309.1 - 2.6e-07 31.2 3.4 0.34 11.9 0.0 4.8 5 0 0 5 5 5 3 WD domain, G-beta repeat WD40_like PF17005.5 BAM41309.1 - 0.0014 18.0 0.1 0.097 12.0 0.0 2.4 3 0 0 3 3 3 2 WD40-like domain TetR PF13972.6 BAM41310.1 - 0.26 11.0 1.6 12 5.6 0.2 2.8 2 0 0 2 2 2 0 Bacterial transcriptional repressor AAA_14 PF13173.6 BAM41311.1 - 0.097 12.7 0.3 0.15 12.1 0.3 1.3 1 0 0 1 1 1 0 AAA domain tRNA_anti-codon PF01336.25 BAM41312.1 - 0.0026 17.7 0.0 0.0062 16.5 0.0 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain Frataxin_Cyay PF01491.16 BAM41313.1 - 1.5e-09 37.9 0.2 1.5e-09 37.9 0.2 3.4 4 1 0 4 4 4 1 Frataxin-like domain BRICHOS PF04089.14 BAM41313.1 - 0.84 9.9 0.0 0.84 9.9 0.0 2.9 3 0 0 3 3 3 0 BRICHOS domain Cas6b_C PF17262.2 BAM41313.1 - 2.1 8.5 10.1 13 5.9 0.3 4.2 3 1 1 4 4 4 0 Cas6b C-terminal domain Ribosomal_L2_C PF03947.18 BAM41314.1 - 3.8e-44 149.9 0.1 6.9e-44 149.1 0.1 1.4 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 BAM41314.1 - 2.5e-27 94.6 0.2 8e-27 93.0 0.2 1.9 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain s48_45 PF07422.13 BAM41315.1 - 4.2e-22 78.8 36.5 8.5e-15 55.3 3.4 5.3 5 0 0 5 5 5 4 Sexual stage antigen s48/45 domain SecB PF02556.14 BAM41315.1 - 0.1 12.5 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 Preprotein translocase subunit SecB Herpes_capsid PF06112.11 BAM41315.1 - 4.2 7.4 12.7 1.1 9.3 9.4 1.6 2 0 0 2 2 2 0 Gammaherpesvirus capsid protein PRP38 PF03371.15 BAM41316.1 - 5.2e-57 192.5 0.0 5.9e-57 192.3 0.0 1.0 1 0 0 1 1 1 1 PRP38 family CKS PF01111.19 BAM41317.1 - 6.8e-18 64.7 0.1 1.4e-17 63.7 0.1 1.5 1 0 0 1 1 1 1 Cyclin-dependent kinase regulatory subunit DUF2461 PF09365.10 BAM41318.1 - 0.049 13.6 0.6 0.36 10.7 0.1 2.1 2 0 0 2 2 2 0 Conserved hypothetical protein (DUF2461) DUF1100 PF06500.11 BAM41318.1 - 0.078 11.8 0.3 0.097 11.4 0.3 1.3 1 1 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF1100) S1-P1_nuclease PF02265.16 BAM41319.1 - 1.8e-11 44.3 0.0 2e-10 40.9 0.0 2.1 1 1 0 1 1 1 1 S1/P1 Nuclease MARVEL PF01284.23 BAM41319.1 - 0.025 14.6 1.1 0.031 14.3 0.1 1.6 2 0 0 2 2 2 0 Membrane-associating domain SHP PF03579.13 BAM41319.1 - 0.043 13.8 0.4 0.11 12.5 0.4 1.6 1 0 0 1 1 1 0 Small hydrophobic protein Orf78 PF06024.12 BAM41319.1 - 0.084 13.2 1.6 0.17 12.2 1.6 1.5 1 0 0 1 1 1 0 Orf78 (ac78) TMEM132D_C PF15706.5 BAM41319.1 - 0.14 11.9 0.2 0.31 10.8 0.2 1.5 1 0 0 1 1 1 0 Mature oligodendrocyte transmembrane protein, TMEM132D, C-term DUF5383 PF17355.2 BAM41319.1 - 3.8 7.9 5.0 6.7 7.1 4.5 1.8 1 1 0 1 1 1 0 Family of unknown function (DUF5383) FAINT PF04385.15 BAM41320.1 - 4.9e-11 42.5 5.1 0.0052 16.8 0.4 4.2 4 0 0 4 4 4 3 Domain of unknown function, DUF529 RabGAP-TBC PF00566.18 BAM41321.1 - 2.6e-52 177.6 2.0 2.6e-52 177.6 2.0 2.3 2 1 0 2 2 2 1 Rab-GTPase-TBC domain Autophagy_act_C PF03987.15 BAM41322.1 - 4e-15 56.1 0.1 1.1e-14 54.7 0.1 1.8 2 0 0 2 2 2 1 Autophagocytosis associated protein, active-site domain Autophagy_N PF03986.13 BAM41322.1 - 4.1e-12 46.2 0.0 7.2e-12 45.4 0.0 1.4 1 0 0 1 1 1 1 Autophagocytosis associated protein (Atg3), N-terminal domain NDUF_B5 PF09781.9 BAM41322.1 - 0.13 11.9 0.0 0.2 11.2 0.0 1.3 1 0 0 1 1 1 0 NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit ATP_bind_3 PF01171.20 BAM41323.1 - 8.7e-25 87.5 2.9 2.4e-15 56.8 0.1 3.3 3 0 0 3 3 3 3 PP-loop family Mistic PF11458.8 BAM41323.1 - 0.099 12.6 1.4 0.21 11.6 0.3 2.1 2 0 0 2 2 2 0 Membrane-integrating protein Mistic Acatn PF13000.7 BAM41324.1 - 1.7e-56 191.9 21.6 2.4e-52 178.2 5.3 3.1 1 1 1 2 2 2 2 Acetyl-coenzyme A transporter 1 ATP_bind_1 PF03029.17 BAM41327.1 - 9e-63 212.3 0.7 7.3e-48 163.4 0.4 2.3 2 1 0 2 2 2 2 Conserved hypothetical ATP binding protein CLP1_P PF16575.5 BAM41327.1 - 0.00033 20.5 0.0 0.00081 19.2 0.0 1.6 2 0 0 2 2 2 1 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_18 PF13238.6 BAM41327.1 - 0.0018 18.8 0.9 0.012 16.1 0.1 2.5 2 1 0 2 2 2 1 AAA domain AAA_14 PF13173.6 BAM41327.1 - 0.008 16.2 0.0 0.026 14.6 0.0 1.8 1 0 0 1 1 1 1 AAA domain G-alpha PF00503.20 BAM41327.1 - 0.048 12.8 0.3 3 6.9 0.0 2.3 2 0 0 2 2 2 0 G-protein alpha subunit AAA_24 PF13479.6 BAM41327.1 - 0.064 13.0 0.0 0.16 11.7 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_17 PF13207.6 BAM41327.1 - 0.12 12.8 0.0 0.34 11.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 BAM41327.1 - 0.13 12.0 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 BAM41327.1 - 0.14 12.5 0.1 1.8 9.0 0.0 2.2 2 0 0 2 2 2 0 RNA helicase AAA_5 PF07728.14 BAM41327.1 - 0.15 12.0 0.0 0.31 11.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) PhoH PF02562.16 BAM41327.1 - 0.18 11.2 0.0 14 5.1 0.0 2.2 2 0 0 2 2 2 0 PhoH-like protein TBP PF00352.21 BAM41329.1 - 3.5e-12 46.1 0.5 0.00019 21.3 0.1 3.0 2 1 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) Fur_reg_FbpB PF13040.6 BAM41329.1 - 0.044 13.3 1.2 0.14 11.8 0.5 2.3 2 0 0 2 2 2 0 Fur-regulated basic protein B GYR PF02756.14 BAM41329.1 - 3.4 7.5 4.7 5.9 6.7 4.7 1.4 1 0 0 1 1 1 0 GYR motif DEAD PF00270.29 BAM41330.1 - 1.9e-14 53.8 0.0 5e-14 52.4 0.0 1.7 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM41330.1 - 7.7e-07 29.4 0.2 4.8e-06 26.9 0.0 2.4 3 1 1 4 4 4 1 Helicase conserved C-terminal domain Pox_G5 PF04599.12 BAM41330.1 - 0.0014 17.8 0.2 0.0025 16.9 0.2 1.4 1 0 0 1 1 1 1 Poxvirus G5 protein ECH_2 PF16113.5 BAM41331.1 - 5.4e-15 55.7 0.0 1.3e-14 54.4 0.0 1.7 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_1 PF00378.20 BAM41331.1 - 7.1e-05 22.2 0.0 0.015 14.6 0.0 2.5 1 1 0 1 1 1 1 Enoyl-CoA hydratase/isomerase RICH PF05062.12 BAM41331.1 - 0.79 10.1 10.0 0.25 11.7 1.5 3.7 3 1 1 4 4 4 0 RICH domain DUF573 PF04504.14 BAM41331.1 - 6.6 7.5 8.0 10 6.8 0.1 3.7 3 0 0 3 3 3 0 Protein of unknown function, DUF573 GRASP55_65 PF04495.14 BAM41332.1 - 5.2e-56 188.8 0.1 4.1e-43 147.0 0.1 2.2 1 1 1 2 2 2 2 GRASP55/65 PDZ-like domain PDZ_2 PF13180.6 BAM41332.1 - 4e-06 27.1 0.0 0.059 13.7 0.0 2.4 2 0 0 2 2 2 2 PDZ domain PDZ_6 PF17820.1 BAM41332.1 - 0.0085 15.9 0.0 4.6 7.2 0.0 2.5 2 0 0 2 2 2 2 PDZ domain Dsh_C PF12316.8 BAM41334.1 - 0.0031 18.0 3.0 0.0031 18.0 3.0 1.9 1 1 1 2 2 2 1 Segment polarity protein dishevelled (Dsh) C terminal CDC27 PF09507.10 BAM41334.1 - 0.0075 15.7 25.1 0.012 15.0 25.1 1.3 1 0 0 1 1 1 1 DNA polymerase subunit Cdc27 Mannosyl_trans2 PF04188.13 BAM41335.1 - 1.1e-17 64.6 34.9 1e-16 61.3 34.9 2.1 1 1 0 1 1 1 1 Mannosyltransferase (PIG-V) UPF0014 PF03649.13 BAM41335.1 - 0.0044 16.4 4.7 0.0084 15.5 3.6 2.2 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0014) DNA_pol_phi PF04931.13 BAM41336.1 - 5.7e-13 47.9 44.2 2.7e-11 42.3 0.1 3.5 4 0 0 4 4 4 2 DNA polymerase phi TFIIA PF03153.13 BAM41336.1 - 0.4 10.6 30.6 0.019 15.0 23.5 2.2 2 0 0 2 2 2 0 Transcription factor IIA, alpha/beta subunit R_equi_Vir PF05526.11 BAM41336.1 - 2.8 7.8 4.9 0.52 10.1 0.1 2.2 2 0 0 2 2 2 0 Rhodococcus equi virulence-associated protein zf-HIT PF04438.16 BAM41338.1 - 1.6e-09 37.5 9.1 1.6e-09 37.5 9.1 2.0 2 0 0 2 2 2 1 HIT zinc finger Guanylate_cyc PF00211.20 BAM41339.1 - 1.2e-18 67.4 0.5 6.2e-08 32.5 0.0 3.5 2 2 0 3 3 3 2 Adenylate and Guanylate cyclase catalytic domain DUF5377 PF17347.2 BAM41339.1 - 0.3 11.5 1.2 5 7.6 0.2 2.9 3 0 0 3 3 3 0 Family of unknown function (DUF5377) Sec34 PF04136.15 BAM41340.1 - 9.7e-06 25.5 14.8 9.7e-06 25.5 14.8 3.4 4 0 0 4 4 4 1 Sec34-like family Syntaxin-6_N PF09177.11 BAM41340.1 - 0.058 13.9 0.2 0.058 13.9 0.2 4.1 5 0 0 5 5 5 0 Syntaxin 6, N-terminal SlyX PF04102.12 BAM41340.1 - 0.26 11.9 1.6 1.5 9.5 0.2 2.8 2 0 0 2 2 2 0 SlyX polyprenyl_synt PF00348.17 BAM41342.1 - 1.4e-51 175.0 0.9 2.4e-51 174.3 0.9 1.4 1 0 0 1 1 1 1 Polyprenyl synthetase HEPPP_synt_1 PF07307.11 BAM41342.1 - 0.003 17.2 0.2 0.0064 16.1 0.2 1.5 1 0 0 1 1 1 1 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 DUF1487 PF07368.11 BAM41343.1 - 0.00025 20.6 0.5 0.0003 20.3 0.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1487) FH2 PF02181.23 BAM41344.1 - 1.4e-32 113.2 2.4 1.4e-32 113.2 2.4 2.8 2 1 0 2 2 2 1 Formin Homology 2 Domain PTEN_C2 PF10409.9 BAM41344.1 - 1.6e-06 27.9 0.0 5.8e-06 26.1 0.0 2.0 1 0 0 1 1 1 1 C2 domain of PTEN tumour-suppressor protein OTCace_N PF02729.21 BAM41344.1 - 0.062 13.3 0.3 0.19 11.8 0.3 1.8 1 0 0 1 1 1 0 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MCM PF00493.23 BAM41346.1 - 1.3e-86 289.3 0.0 2.1e-86 288.6 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain MCM_lid PF17855.1 BAM41346.1 - 3.8e-19 68.9 0.6 1.2e-18 67.3 0.6 1.9 1 0 0 1 1 1 1 MCM AAA-lid domain MCM_OB PF17207.3 BAM41346.1 - 4.3e-17 62.1 0.0 7.6e-17 61.3 0.0 1.4 1 0 0 1 1 1 1 MCM OB domain AAA_5 PF07728.14 BAM41346.1 - 4.3e-10 39.7 0.1 1.9e-09 37.6 0.0 2.2 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) MCM_N PF14551.6 BAM41346.1 - 6.5e-10 39.5 2.8 3.4e-09 37.2 2.8 2.3 1 0 0 1 1 1 1 MCM N-terminal domain Mg_chelatase PF01078.21 BAM41346.1 - 3.2e-07 30.0 0.0 0.00029 20.3 0.0 2.5 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 BAM41346.1 - 5.7e-05 23.0 0.0 0.00026 20.9 0.0 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 BAM41346.1 - 0.0036 17.0 0.6 0.074 12.7 0.0 3.0 3 1 0 3 3 3 1 Sigma-54 interaction domain AAA_16 PF13191.6 BAM41346.1 - 0.0098 16.3 0.3 0.78 10.1 0.1 2.6 1 1 0 2 2 2 1 AAA ATPase domain YccV-like PF08755.11 BAM41346.1 - 0.036 14.6 0.8 0.11 13.0 0.4 2.0 1 1 1 2 2 2 0 Hemimethylated DNA-binding protein YccV like Roc PF08477.13 BAM41346.1 - 0.075 13.3 0.9 7.1 6.9 0.0 2.7 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase DEAD PF00270.29 BAM41346.1 - 0.15 11.8 1.7 6.6 6.5 0.0 3.7 4 0 0 4 4 4 0 DEAD/DEAH box helicase Ribosomal_S13 PF00416.22 BAM41346.1 - 4 7.8 5.1 1.1 9.6 0.2 2.6 3 0 0 3 3 3 0 Ribosomal protein S13/S18 DUF900 PF05990.12 BAM41347.1 - 7.8e-24 84.5 0.0 6.2e-23 81.5 0.0 2.0 2 0 0 2 2 2 1 Alpha/beta hydrolase of unknown function (DUF900) Med7 PF05983.11 BAM41347.1 - 0.059 13.5 0.2 0.14 12.2 0.2 1.6 1 0 0 1 1 1 0 MED7 protein DUF4500 PF14937.6 BAM41347.1 - 0.073 13.1 1.3 0.28 11.2 1.3 2.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4500) DUF4943 PF16301.5 BAM41347.1 - 0.08 13.0 0.0 0.51 10.3 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4943) FAINT PF04385.15 BAM41348.1 - 1.6e-17 63.3 17.0 1.9e-06 27.8 0.8 5.5 5 0 0 5 5 5 4 Domain of unknown function, DUF529 Corona_3 PF04694.12 BAM41348.1 - 0.18 12.2 0.1 0.49 10.8 0.1 1.7 1 0 0 1 1 1 0 Coronavirus ORF3 protein D123 PF07065.14 BAM41349.1 - 8 5.5 8.6 0.12 11.5 1.1 1.8 2 0 0 2 2 2 0 D123 Tubulin PF00091.25 BAM41350.1 - 9.4e-69 231.6 0.0 8.7e-68 228.4 0.0 2.1 2 0 0 2 2 2 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 BAM41350.1 - 2e-24 86.1 1.1 3.5e-24 85.4 1.1 1.4 1 0 0 1 1 1 1 Tubulin C-terminal domain Misat_Tub_SegII PF10644.9 BAM41350.1 - 6.7e-06 26.4 0.0 1.6e-05 25.2 0.0 1.7 1 0 0 1 1 1 1 Misato Segment II tubulin-like domain Tubulin_2 PF13809.6 BAM41350.1 - 0.0067 15.7 0.0 0.011 15.0 0.0 1.3 1 0 0 1 1 1 1 Tubulin like tRNA-synt_2b PF00587.25 BAM41351.1 - 6.2e-37 127.3 0.1 1.1e-36 126.4 0.1 1.4 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 BAM41351.1 - 1.5e-09 38.0 9.5 1.1e-08 35.3 9.1 2.2 1 1 1 2 2 2 1 Seryl-tRNA synthetase N-terminal domain PCRF PF03462.18 BAM41351.1 - 0.051 13.4 1.1 0.1 12.5 1.1 1.4 1 0 0 1 1 1 0 PCRF domain DUF4254 PF14063.6 BAM41351.1 - 0.063 13.1 0.1 0.13 12.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4254) DUF1667 PF07892.11 BAM41351.1 - 0.087 12.9 0.0 0.24 11.5 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1667) Cas_GSU0054 PF09609.10 BAM41351.1 - 0.18 10.5 0.0 0.26 9.9 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein, GSU0054 family (Cas_GSU0054) RTC PF01137.21 BAM41352.1 - 2.3e-20 72.7 0.0 4.1e-20 71.9 0.0 1.3 1 1 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.13 BAM41352.1 - 2e-07 31.4 0.0 3.7e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain FSA_C PF10479.9 BAM41352.1 - 6.8 4.7 8.0 12 3.9 8.0 1.3 1 0 0 1 1 1 0 Fragile site-associated protein C-terminus FAD_binding_2 PF00890.24 BAM41353.1 - 2.5e-107 359.6 0.7 7.7e-100 334.9 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain Succ_DH_flav_C PF02910.20 BAM41353.1 - 3.2e-35 120.9 0.1 5e-35 120.3 0.1 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term GIDA PF01134.22 BAM41353.1 - 0.0007 18.8 0.9 0.17 10.9 1.2 2.3 2 0 0 2 2 2 2 Glucose inhibited division protein A Pyr_redox_2 PF07992.14 BAM41353.1 - 0.00097 18.5 0.1 0.01 15.1 0.0 2.4 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 BAM41353.1 - 0.0077 15.5 0.1 0.012 14.9 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 BAM41353.1 - 0.12 11.6 1.1 4.6 6.4 0.7 2.2 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 BAM41353.1 - 0.15 11.2 0.2 7.4 5.7 0.1 2.5 2 0 0 2 2 2 0 Thi4 family HI0933_like PF03486.14 BAM41353.1 - 0.17 10.6 0.8 0.86 8.2 0.5 2.3 3 0 0 3 3 3 0 HI0933-like protein Ribosomal_L27 PF01016.19 BAM41354.1 - 4.1e-24 84.4 0.3 6.6e-24 83.7 0.3 1.3 1 0 0 1 1 1 1 Ribosomal L27 protein Pyr_redox_2 PF07992.14 BAM41355.1 - 1.4e-61 208.3 3.8 1.7e-61 208.0 3.8 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 BAM41355.1 - 8.8e-33 112.9 0.0 1.8e-32 111.9 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 BAM41355.1 - 4.2e-20 72.1 3.5 2.1e-16 60.2 0.5 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 BAM41355.1 - 8.1e-10 38.0 5.8 0.00026 19.8 0.1 3.9 3 1 1 4 4 4 3 HI0933-like protein NAD_binding_8 PF13450.6 BAM41355.1 - 8.6e-10 38.7 0.3 1.1e-05 25.6 0.1 2.6 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain Pyr_redox_3 PF13738.6 BAM41355.1 - 1.4e-09 37.6 1.3 0.00013 21.4 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 BAM41355.1 - 2.5e-08 33.4 2.2 7.1e-06 25.3 0.4 3.2 3 0 0 3 3 3 1 FAD binding domain GIDA PF01134.22 BAM41355.1 - 3.4e-08 33.0 4.8 5.2e-06 25.8 2.1 2.8 2 1 0 2 2 2 2 Glucose inhibited division protein A FAD_oxidored PF12831.7 BAM41355.1 - 3.5e-08 33.2 0.2 3.5e-08 33.2 0.2 1.7 2 0 0 2 2 2 1 FAD dependent oxidoreductase DAO PF01266.24 BAM41355.1 - 2.6e-07 30.5 5.8 0.021 14.4 0.4 3.8 3 1 1 4 4 4 2 FAD dependent oxidoreductase Thi4 PF01946.17 BAM41355.1 - 2.4e-06 27.0 0.0 2.8e-05 23.5 0.0 2.2 2 0 0 2 2 2 1 Thi4 family AlaDh_PNT_C PF01262.21 BAM41355.1 - 2.3e-05 23.8 0.5 0.001 18.4 0.4 2.3 2 0 0 2 2 2 1 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 BAM41355.1 - 0.0014 18.6 1.8 0.042 13.7 0.1 2.4 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 BAM41355.1 - 0.0069 15.5 1.2 0.32 10.0 0.1 2.3 2 0 0 2 2 2 1 Lycopene cyclase protein K_oxygenase PF13434.6 BAM41355.1 - 0.014 14.5 0.6 1.3 8.1 0.0 2.6 3 0 0 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) NAD_Gly3P_dh_N PF01210.23 BAM41355.1 - 0.015 15.3 0.4 0.12 12.4 0.1 2.3 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus XdhC_C PF13478.6 BAM41355.1 - 0.026 15.0 0.0 3.7 8.1 0.0 2.4 2 0 0 2 2 2 0 XdhC Rossmann domain FAD_binding_3 PF01494.19 BAM41355.1 - 0.49 9.6 3.5 11 5.2 0.4 2.4 2 1 0 2 2 2 0 FAD binding domain FAINT PF04385.15 BAM41356.1 - 2.1e-22 79.0 125.8 9.5e-07 28.8 7.0 15.6 13 2 1 14 14 14 13 Domain of unknown function, DUF529 DUF2624 PF11116.8 BAM41356.1 - 0.52 11.2 2.2 27 5.7 0.3 3.8 5 0 0 5 5 5 0 Protein of unknown function (DUF2624) Skp1 PF01466.19 BAM41357.1 - 2e-20 72.6 0.1 3.4e-20 71.9 0.1 1.4 1 0 0 1 1 1 1 Skp1 family, dimerisation domain Skp1_POZ PF03931.15 BAM41357.1 - 3.6e-18 65.5 1.6 7.4e-18 64.5 1.6 1.5 1 0 0 1 1 1 1 Skp1 family, tetramerisation domain Myb_DNA-binding PF00249.31 BAM41357.1 - 0.07 13.3 0.1 9.9 6.5 0.0 3.1 3 0 0 3 3 3 0 Myb-like DNA-binding domain SCAN PF02023.17 BAM41357.1 - 0.11 12.3 0.0 0.2 11.5 0.0 1.5 1 1 0 1 1 1 0 SCAN domain Nsp1_C PF05064.13 BAM41357.1 - 0.15 11.9 0.0 0.28 11.0 0.0 1.4 1 0 0 1 1 1 0 Nsp1-like C-terminal region Prefoldin_2 PF01920.20 BAM41359.1 - 1.8e-05 24.7 5.8 2.3e-05 24.3 5.8 1.2 1 0 0 1 1 1 1 Prefoldin subunit Cauli_AT PF03233.13 BAM41359.1 - 0.084 12.8 6.4 0.093 12.7 6.4 1.1 1 0 0 1 1 1 0 Aphid transmission protein Ribosomal_L24e PF01246.20 BAM41360.1 - 4.1e-31 107.0 4.6 4.1e-31 107.0 4.6 1.9 2 0 0 2 2 2 1 Ribosomal protein L24e zf-FCS PF06467.14 BAM41360.1 - 0.11 12.4 7.0 0.22 11.5 7.0 1.5 1 0 0 1 1 1 0 MYM-type Zinc finger with FCS sequence motif SYF2 PF08231.12 BAM41361.1 - 3.9e-33 115.1 14.5 3.9e-33 115.1 14.5 1.9 2 0 0 2 2 2 1 SYF2 splicing factor Pro_isomerase PF00160.21 BAM41361.1 - 2.6e-20 73.3 0.0 6.7e-20 72.0 0.0 1.8 1 1 0 1 1 1 1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Collectrin PF16959.5 BAM41362.1 - 0.19 11.5 1.5 0.48 10.2 1.5 1.6 1 0 0 1 1 1 0 Renal amino acid transporter DUF5355 PF17306.2 BAM41363.1 - 0.076 12.1 0.3 0.075 12.1 0.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5355) DUF5355 PF17306.2 BAM41365.1 - 0.076 12.1 0.3 0.075 12.1 0.3 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF5355) DUF4162 PF13732.6 BAM41366.1 - 0.027 15.2 0.6 0.12 13.1 0.0 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4162) Collectrin PF16959.5 BAM41366.1 - 0.17 11.6 1.1 0.39 10.5 1.1 1.5 1 0 0 1 1 1 0 Renal amino acid transporter IMPDH PF00478.25 BAM41368.1 - 1.5e-119 399.0 4.5 1.7e-119 398.9 4.5 1.0 1 0 0 1 1 1 1 IMP dehydrogenase / GMP reductase domain CBS PF00571.28 BAM41368.1 - 4.4e-13 49.5 2.4 3.8e-05 24.0 0.0 4.8 5 1 1 6 6 6 2 CBS domain NMO PF03060.15 BAM41368.1 - 1.1e-11 44.8 1.9 9.2e-06 25.3 0.2 2.5 3 0 0 3 3 3 2 Nitronate monooxygenase FMN_dh PF01070.18 BAM41368.1 - 3.2e-09 36.3 5.4 3.2e-08 33.0 4.2 2.8 3 1 0 3 3 3 1 FMN-dependent dehydrogenase His_biosynth PF00977.21 BAM41368.1 - 0.00026 20.5 3.4 0.0096 15.4 3.2 2.3 1 1 1 2 2 2 2 Histidine biosynthesis protein Glu_synthase PF01645.17 BAM41368.1 - 0.00078 18.7 3.3 0.0011 18.2 2.4 1.6 1 1 1 2 2 2 1 Conserved region in glutamate synthase ThiG PF05690.14 BAM41368.1 - 0.0014 18.0 1.9 0.02 14.2 0.9 2.3 1 1 1 2 2 2 2 Thiazole biosynthesis protein ThiG B12-binding PF02310.19 BAM41368.1 - 0.0076 16.3 0.1 0.018 15.0 0.1 1.6 1 0 0 1 1 1 1 B12 binding domain Aldolase PF01081.19 BAM41368.1 - 0.053 12.9 0.6 0.12 11.8 0.6 1.6 1 1 0 1 1 1 0 KDPG and KHG aldolase DHO_dh PF01180.21 BAM41368.1 - 0.25 10.5 4.6 0.15 11.2 0.4 2.4 1 1 0 2 2 2 0 Dihydroorotate dehydrogenase PcrB PF01884.17 BAM41368.1 - 0.47 9.9 7.9 14 5.1 0.0 4.3 3 1 2 5 5 5 0 PcrB family TMP_2 PF06791.13 BAM41369.1 - 6.8 6.3 10.0 5.4 6.6 0.1 2.5 2 0 0 2 2 2 0 Prophage tail length tape measure protein DEAD PF00270.29 BAM41371.1 - 1.8e-28 99.5 1.0 2.3e-28 99.1 0.1 1.5 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM41371.1 - 3.6e-25 88.5 0.2 2.2e-23 82.7 0.0 2.7 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM41371.1 - 5.5e-06 26.5 0.1 1.1e-05 25.5 0.1 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit UTP25 PF06862.12 BAM41371.1 - 0.0015 17.4 1.0 0.25 10.1 0.1 2.2 2 0 0 2 2 2 2 Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 T4SS-DNA_transf PF02534.14 BAM41371.1 - 0.02 13.7 0.0 0.032 13.1 0.0 1.3 1 0 0 1 1 1 0 Type IV secretory system Conjugative DNA transfer Microtub_bd PF16796.5 BAM41371.1 - 0.028 14.3 0.0 0.059 13.3 0.0 1.5 1 0 0 1 1 1 0 Microtubule binding Prp19 PF08606.11 BAM41372.1 - 1.2e-28 98.8 0.4 2.4e-28 97.9 0.4 1.5 1 0 0 1 1 1 1 Prp19/Pso4-like WD40 PF00400.32 BAM41372.1 - 4.6e-21 74.7 15.5 0.00082 20.1 0.0 7.6 8 0 0 8 8 8 6 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM41372.1 - 3.7e-08 33.6 0.3 0.24 11.7 0.2 5.1 1 1 5 6 6 6 4 Anaphase-promoting complex subunit 4 WD40 domain U-box PF04564.15 BAM41372.1 - 2e-06 27.9 0.0 5.3e-06 26.5 0.0 1.7 1 0 0 1 1 1 1 U-box domain zf-Nse PF11789.8 BAM41372.1 - 0.021 14.6 0.1 0.086 12.7 0.1 2.0 2 0 0 2 2 2 0 Zinc-finger of the MIZ type in Nse subunit Hira PF07569.11 BAM41372.1 - 0.047 13.4 0.0 5.7 6.6 0.0 2.4 1 1 0 2 2 2 0 TUP1-like enhancer of split WD40_like PF17005.5 BAM41372.1 - 0.1 11.9 0.0 15 4.8 0.0 2.5 2 1 1 3 3 3 0 WD40-like domain ING PF12998.7 BAM41373.1 - 0.0077 16.8 5.5 0.016 15.8 5.5 1.5 1 0 0 1 1 1 1 Inhibitor of growth proteins N-terminal histone-binding Cob_adeno_trans PF01923.18 BAM41373.1 - 0.14 12.3 0.4 18 5.4 0.0 2.6 2 1 0 2 2 2 0 Cobalamin adenosyltransferase Spidroin_N PF16763.5 BAM41373.1 - 0.14 12.2 0.1 0.3 11.1 0.1 1.5 1 0 0 1 1 1 0 Major ampullate spidroin 1, spider silk protein 1, N-term Gp-FAR-1 PF05823.12 BAM41373.1 - 0.7 10.2 4.2 7.3 6.9 0.2 2.2 1 1 1 2 2 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) RIH_assoc PF08454.11 BAM41373.1 - 1.3 8.9 7.8 4.6 7.2 2.9 2.8 2 1 0 2 2 2 0 RyR and IP3R Homology associated FAINT PF04385.15 BAM41374.1 - 3e-09 36.8 1.0 3e-09 36.8 1.0 3.6 3 1 0 3 3 3 2 Domain of unknown function, DUF529 DUF1827 PF08860.10 BAM41374.1 - 0.0077 16.5 0.3 0.024 14.9 0.3 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF1827) SF3b1 PF08920.10 BAM41375.1 - 4.3e-25 88.5 3.8 1.2e-24 87.1 3.8 1.7 1 0 0 1 1 1 1 Splicing factor 3B subunit 1 HEAT_2 PF13646.6 BAM41375.1 - 3.1e-12 46.7 5.0 0.061 13.7 0.0 8.2 7 2 2 9 9 8 3 HEAT repeats HEAT PF02985.22 BAM41375.1 - 4.8e-11 41.9 4.9 0.044 14.1 0.0 8.9 9 0 0 9 9 8 1 HEAT repeat HEAT_EZ PF13513.6 BAM41375.1 - 9.1e-11 42.0 4.9 0.07 13.7 0.0 8.7 9 2 2 11 11 11 3 HEAT-like repeat Cnd1 PF12717.7 BAM41375.1 - 0.00043 20.4 0.1 2.9 7.9 0.0 5.0 4 1 1 5 5 5 1 non-SMC mitotic condensation complex subunit 1 CLASP_N PF12348.8 BAM41375.1 - 0.00053 19.6 0.2 0.73 9.4 0.0 3.3 3 0 0 3 3 3 1 CLASP N terminal Adaptin_N PF01602.20 BAM41375.1 - 0.0006 18.5 3.7 0.1 11.1 0.0 3.9 3 1 0 4 4 4 1 Adaptin N terminal region NUC173 PF08161.12 BAM41375.1 - 0.00064 19.4 0.1 2.1 7.9 0.0 4.7 3 2 2 5 5 5 1 NUC173 domain Arm PF00514.23 BAM41375.1 - 0.00099 19.1 1.5 37 4.5 0.1 5.5 5 0 0 5 5 5 0 Armadillo/beta-catenin-like repeat Vac14_Fab1_bd PF12755.7 BAM41375.1 - 0.0048 17.5 0.0 0.35 11.5 0.0 3.2 2 0 0 2 2 2 1 Vacuolar 14 Fab1-binding region Dopey_N PF04118.14 BAM41375.1 - 0.0074 15.4 0.8 10 5.2 0.1 3.4 3 0 0 3 3 3 1 Dopey, N-terminal MMS19_C PF12460.8 BAM41375.1 - 0.012 14.8 0.0 12 4.9 0.0 3.9 4 0 0 4 4 4 0 RNAPII transcription regulator C-terminal UME PF08064.13 BAM41375.1 - 0.023 14.6 4.7 32 4.5 0.0 5.8 6 1 1 7 7 7 0 UME (NUC010) domain NupH_GANP PF16768.5 BAM41375.1 - 0.053 13.2 0.0 0.083 12.6 0.0 1.2 1 0 0 1 1 1 0 Nucleoporin homology of Germinal-centre associated nuclear protein UPF0220 PF05255.11 BAM41375.1 - 0.093 12.3 0.1 0.16 11.5 0.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0220) TetR_C_23 PF17931.1 BAM41375.1 - 0.11 12.6 2.2 0.92 9.6 0.1 3.0 2 1 1 3 3 3 0 Tetracyclin repressor-like, C-terminal domain CTD PF12815.7 BAM41375.1 - 0.85 10.2 4.1 2.4 8.8 4.1 1.7 1 0 0 1 1 1 0 Spt5 C-terminal nonapeptide repeat binding Spt4 Cpn60_TCP1 PF00118.24 BAM41377.1 - 3.5e-133 444.8 6.8 5.7e-78 262.7 8.3 3.1 1 1 1 2 2 2 2 TCP-1/cpn60 chaperonin family DUF5100 PF17029.5 BAM41377.1 - 0.045 13.6 0.1 0.15 12.0 0.1 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF5100) ATP-synt_10 PF05176.14 BAM41378.1 - 0.015 14.5 0.0 0.029 13.6 0.0 1.4 1 0 0 1 1 1 0 ATP10 protein DUF572 PF04502.13 BAM41379.1 - 9e-36 124.1 28.4 8.7e-34 117.6 28.4 2.1 1 1 0 1 1 1 1 Family of unknown function (DUF572) ABC_tran PF00005.27 BAM41382.1 - 8.7e-33 113.7 0.0 1.1e-17 64.8 0.0 2.9 2 1 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 BAM41382.1 - 1.8e-06 27.9 17.8 1.8e-06 27.9 17.8 3.7 3 1 1 4 4 2 1 ABC transporter transmembrane region RsgA_GTPase PF03193.16 BAM41382.1 - 2e-05 24.5 0.6 0.073 13.0 0.1 2.8 2 0 0 2 2 2 2 RsgA GTPase MeaB PF03308.16 BAM41382.1 - 5.8e-05 22.2 0.1 0.0054 15.8 0.1 2.2 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB Zeta_toxin PF06414.12 BAM41382.1 - 6.7e-05 22.3 0.5 0.11 11.7 0.1 2.5 2 0 0 2 2 2 2 Zeta toxin AAA_29 PF13555.6 BAM41382.1 - 0.00022 20.9 0.7 0.34 10.7 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_16 PF13191.6 BAM41382.1 - 0.00032 21.1 0.1 0.33 11.3 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain T2SSE PF00437.20 BAM41382.1 - 0.0012 18.0 0.4 1 8.4 0.0 2.3 2 0 0 2 2 2 2 Type II/IV secretion system protein AAA_30 PF13604.6 BAM41382.1 - 0.0019 18.0 0.7 0.12 12.1 0.1 2.3 2 0 0 2 2 2 1 AAA domain AAA_23 PF13476.6 BAM41382.1 - 0.0019 18.7 1.3 1.9 9.0 0.1 2.7 2 0 0 2 2 2 2 AAA domain SMC_N PF02463.19 BAM41382.1 - 0.01 15.3 1.8 0.045 13.2 0.2 2.5 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 BAM41382.1 - 0.028 14.2 0.6 3.1 7.5 0.1 2.6 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system FtsK_SpoIIIE PF01580.18 BAM41382.1 - 0.03 13.7 0.6 0.85 8.9 0.1 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family MMR_HSR1 PF01926.23 BAM41382.1 - 0.042 13.9 0.8 1.4 9.0 0.1 2.8 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_22 PF13401.6 BAM41382.1 - 0.066 13.5 0.5 17 5.7 0.0 2.8 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 BAM41382.1 - 0.069 12.7 0.0 6.4 6.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 BAM41382.1 - 0.08 12.6 0.1 0.18 11.4 0.1 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain NB-ARC PF00931.22 BAM41382.1 - 0.13 11.4 1.6 0.77 8.9 0.3 2.5 2 0 0 2 2 2 0 NB-ARC domain TsaE PF02367.17 BAM41382.1 - 0.14 12.2 0.1 12 5.9 0.0 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE TrwB_AAD_bind PF10412.9 BAM41382.1 - 0.15 11.0 0.9 6.5 5.5 0.0 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain AAA_33 PF13671.6 BAM41382.1 - 0.17 12.0 1.5 22 5.2 0.0 3.0 3 0 0 3 3 3 0 AAA domain ATP_bind_1 PF03029.17 BAM41382.1 - 0.24 11.2 4.4 9 6.0 0.0 2.9 3 0 0 3 3 3 0 Conserved hypothetical ATP binding protein MobB PF03205.14 BAM41382.1 - 0.28 11.1 2.7 2.1 8.2 0.3 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B cobW PF02492.19 BAM41382.1 - 0.6 9.7 7.1 3.4 7.2 0.2 2.7 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain NACHT PF05729.12 BAM41382.1 - 1.2 9.1 6.1 11 5.9 0.3 3.1 3 0 0 3 3 3 0 NACHT domain DUF87 PF01935.17 BAM41382.1 - 1.5 8.9 9.0 2.5 8.1 0.2 2.9 3 0 0 3 3 3 0 Helicase HerA, central domain ATPase_2 PF01637.18 BAM41382.1 - 7.2 6.5 9.7 3.5 7.5 0.1 3.8 5 0 0 5 5 3 0 ATPase domain predominantly from Archaea Cpn60_TCP1 PF00118.24 BAM41384.1 - 7.4e-83 278.8 8.2 5.5e-81 272.7 8.2 2.2 1 1 0 1 1 1 1 TCP-1/cpn60 chaperonin family NTP_transf_2 PF01909.23 BAM41385.1 - 2.6e-07 30.8 0.9 5.7e-07 29.7 0.0 2.1 3 0 0 3 3 3 1 Nucleotidyltransferase domain Polbeta PF18765.1 BAM41385.1 - 0.0018 18.3 0.3 0.011 15.8 0.0 2.5 2 0 0 2 2 2 1 Polymerase beta, Nucleotidyltransferase Thioredoxin PF00085.20 BAM41386.1 - 0.0061 16.5 0.0 0.013 15.5 0.0 1.6 1 0 0 1 1 1 1 Thioredoxin Ly49 PF08391.10 BAM41386.1 - 0.022 15.1 9.3 0.036 14.4 5.7 2.5 1 1 0 2 2 2 0 Ly49-like protein, N-terminal region MetOD2 PF18548.1 BAM41386.1 - 0.12 12.5 2.6 0.28 11.3 1.5 2.2 2 0 0 2 2 2 0 Metanogen output domain 2 Iron_permease PF04120.12 BAM41386.1 - 0.18 11.6 4.2 0.41 10.4 4.2 1.5 1 0 0 1 1 1 0 Low affinity iron permease S_4TM PF18159.1 BAM41386.1 - 0.4 9.9 3.3 0.65 9.2 3.3 1.2 1 0 0 1 1 1 0 SMODS-associating 4TM effector domain DUF4577 PF15145.6 BAM41386.1 - 6.5 6.8 9.2 93 3.1 9.2 2.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4577) WD40 PF00400.32 BAM41387.1 - 2.2e-20 72.6 10.0 1.2e-05 25.9 0.1 8.0 8 0 0 8 8 8 4 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM41387.1 - 1.5e-11 44.4 0.1 0.022 15.1 0.0 5.2 4 1 0 4 4 4 4 Anaphase-promoting complex subunit 4 WD40 domain PD40 PF07676.12 BAM41387.1 - 0.00082 19.3 0.8 10 6.2 0.1 4.0 3 0 0 3 3 3 2 WD40-like Beta Propeller Repeat TFIIIC_delta PF12657.7 BAM41387.1 - 0.00087 19.3 5.3 1.1 9.1 0.1 5.1 3 1 1 4 4 4 1 Transcription factor IIIC subunit delta N-term Ge1_WD40 PF16529.5 BAM41387.1 - 0.0038 16.2 0.9 0.19 10.7 0.0 3.1 3 1 0 3 3 3 1 WD40 region of Ge1, enhancer of mRNA-decapping protein DNA_pol_B PF00136.21 BAM41388.1 - 9.7e-104 347.6 13.2 2e-103 346.6 13.2 1.6 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 BAM41388.1 - 1.3e-27 96.9 11.2 1.3e-27 96.9 11.2 2.6 2 0 0 2 2 2 1 DNA polymerase family B, exonuclease domain DNA_pol_alpha_N PF12254.8 BAM41388.1 - 2.4e-08 33.9 7.3 8.5e-08 32.2 7.3 2.0 1 0 0 1 1 1 1 DNA polymerase alpha subunit p180 N terminal PRP38 PF03371.15 BAM41388.1 - 0.16 11.9 5.6 0.042 13.7 0.8 2.5 3 0 0 3 3 3 0 PRP38 family LIN52 PF10044.9 BAM41388.1 - 4.6 8.0 6.9 5 7.9 0.1 4.0 3 0 0 3 3 3 0 Retinal tissue protein RRM_1 PF00076.22 BAM41389.1 - 5.8e-12 45.3 0.2 0.00024 20.9 0.0 4.6 3 2 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 BAM41389.1 - 0.048 13.5 0.0 10 6.1 0.0 2.5 2 0 0 2 2 2 0 Occluded RNA-recognition motif Dsh_C PF12316.8 BAM41389.1 - 1.8 9.0 6.8 3.7 7.9 6.8 1.6 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal Hydrolase_4 PF12146.8 BAM41390.1 - 2.3e-18 66.4 0.0 4.5e-09 35.9 0.0 2.5 2 0 0 2 2 2 2 Serine aminopeptidase, S33 FAINT PF04385.15 BAM41390.1 - 4.6e-17 61.9 12.2 6.3e-06 26.2 0.1 4.4 4 0 0 4 4 4 3 Domain of unknown function, DUF529 Abhydrolase_1 PF00561.20 BAM41390.1 - 5.8e-08 32.7 0.0 0.044 13.4 0.0 3.5 2 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_4 PF08386.10 BAM41390.1 - 0.00069 19.7 0.0 0.0016 18.5 0.0 1.6 1 0 0 1 1 1 1 TAP-like protein Abhydrolase_6 PF12697.7 BAM41390.1 - 0.069 13.7 0.0 25 5.4 0.1 2.7 2 1 0 2 2 2 0 Alpha/beta hydrolase family RNA_pol_A_bac PF01000.26 BAM41391.1 - 0.00013 22.3 0.0 0.00094 19.5 0.0 2.1 1 1 0 1 1 1 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 BAM41391.1 - 0.018 14.4 0.2 0.076 12.4 0.0 2.0 2 0 0 2 2 2 0 RNA polymerase Rpb3/Rpb11 dimerisation domain FAINT PF04385.15 BAM41392.1 - 8.4e-17 61.0 25.5 2.9e-06 27.2 0.4 6.6 6 0 0 6 6 6 5 Domain of unknown function, DUF529 FAINT PF04385.15 BAM41394.1 - 9e-08 32.1 25.9 0.002 18.1 2.1 5.8 4 1 0 4 4 4 3 Domain of unknown function, DUF529 Fer2 PF00111.27 BAM41394.1 - 0.04 13.9 0.0 0.11 12.4 0.0 1.7 1 0 0 1 1 1 0 2Fe-2S iron-sulfur cluster binding domain DUF5300 PF17224.3 BAM41394.1 - 0.061 13.6 1.8 0.87 9.9 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF5300) FAINT PF04385.15 BAM41395.1 - 0.027 14.5 3.7 1.2 9.3 0.3 3.6 3 0 0 3 3 3 0 Domain of unknown function, DUF529 CBM_X2 PF03442.14 BAM41395.1 - 0.032 14.4 0.1 1.5 9.0 0.0 2.7 2 1 0 2 2 2 0 Carbohydrate binding domain X2 DEAD PF00270.29 BAM41396.1 - 1.6e-43 148.5 0.1 4.3e-43 147.1 0.1 1.8 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM41396.1 - 7.1e-26 90.7 0.1 1.1e-24 86.9 0.0 2.7 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM41396.1 - 3.2e-07 30.5 0.0 1.5e-06 28.3 0.0 2.1 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit RNA_pol_Rpb1_1 PF04997.12 BAM41396.1 - 0.013 14.8 0.0 0.013 14.8 0.0 2.1 3 0 0 3 3 3 0 RNA polymerase Rpb1, domain 1 AAA_22 PF13401.6 BAM41396.1 - 0.052 13.8 1.5 0.3 11.4 0.3 2.7 2 1 0 2 2 2 0 AAA domain GTP_EFTU PF00009.27 BAM41397.1 - 2.4e-31 108.8 4.6 7.7e-30 103.9 4.6 2.6 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 BAM41397.1 - 1.5e-09 38.0 0.2 1.2e-08 35.1 0.2 2.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase Ras PF00071.22 BAM41397.1 - 2.5e-07 30.4 1.0 1.8e-06 27.7 0.4 2.5 2 0 0 2 2 2 1 Ras family IF-2 PF11987.8 BAM41397.1 - 1.9e-06 27.9 4.3 0.017 15.2 0.3 4.3 3 0 0 3 3 3 2 Translation-initiation factor 2 RsgA_GTPase PF03193.16 BAM41397.1 - 2.3e-06 27.6 6.1 0.00012 22.0 0.3 3.3 2 1 1 3 3 3 2 RsgA GTPase FeoB_N PF02421.18 BAM41397.1 - 1.2e-05 24.9 0.8 5.1e-05 22.8 0.8 2.2 1 1 0 1 1 1 1 Ferrous iron transport protein B PduV-EutP PF10662.9 BAM41397.1 - 0.00016 21.5 1.9 0.00032 20.5 0.6 2.2 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation MMR_HSR1_Xtn PF16897.5 BAM41397.1 - 0.00057 19.9 2.1 0.0011 18.9 0.1 2.6 3 0 0 3 3 3 1 C-terminal region of MMR_HSR1 domain Dynamin_N PF00350.23 BAM41397.1 - 0.0017 18.4 0.4 0.023 14.8 0.4 3.1 1 1 0 1 1 1 1 Dynamin family Roc PF08477.13 BAM41397.1 - 0.0078 16.4 0.1 0.035 14.3 0.1 2.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase MnmE_helical PF12631.7 BAM41397.1 - 0.017 15.3 0.9 0.077 13.2 0.1 2.7 1 1 0 2 2 2 0 MnmE helical domain FtsK_alpha PF17854.1 BAM41397.1 - 0.048 13.8 2.4 0.35 11.0 0.2 3.2 3 0 0 3 3 3 0 FtsK alpha domain GTP_EFTU_D2 PF03144.25 BAM41397.1 - 0.051 14.0 0.1 0.19 12.1 0.1 2.0 1 0 0 1 1 1 0 Elongation factor Tu domain 2 Poly_export PF02563.16 BAM41397.1 - 0.051 13.8 0.9 0.18 12.0 0.2 2.4 2 0 0 2 2 2 0 Polysaccharide biosynthesis/export protein Ribosomal_L21p PF00829.21 BAM41398.1 - 4.6e-22 78.2 0.0 6.6e-22 77.7 0.0 1.2 1 0 0 1 1 1 1 Ribosomal prokaryotic L21 protein Band_7 PF01145.25 BAM41402.1 - 1e-26 94.0 3.0 1.4e-26 93.6 0.0 2.4 2 0 0 2 2 2 1 SPFH domain / Band 7 family Band_7_C PF16200.5 BAM41402.1 - 4e-15 55.6 3.4 4.7e-15 55.4 1.0 2.2 2 0 0 2 2 2 1 C-terminal region of band_7 Band_7_1 PF13421.6 BAM41402.1 - 0.0054 16.5 0.0 0.018 14.8 0.0 1.9 1 0 0 1 1 1 1 SPFH domain-Band 7 family DUF5133 PF17196.4 BAM41402.1 - 0.12 12.5 0.2 0.29 11.4 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF5133) DUF1151 PF06625.11 BAM41402.1 - 2.6 8.0 6.5 0.54 10.2 2.5 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1151) RNA_pol_Rpb1_5 PF04998.17 BAM41403.1 - 6.3e-100 334.0 0.2 1.2e-99 333.1 0.2 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_1 PF04997.12 BAM41403.1 - 1.9e-98 329.7 1.6 2.5e-98 329.3 0.1 1.9 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 BAM41403.1 - 3.8e-73 245.2 0.0 7.3e-73 244.3 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_6 PF04992.14 BAM41403.1 - 1e-49 169.0 0.4 1e-49 169.0 0.4 1.7 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 6 RNA_pol_Rpb1_3 PF04983.18 BAM41403.1 - 1.1e-45 155.3 0.0 2.7e-45 154.1 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 BAM41403.1 - 6.2e-37 125.9 0.2 1.6e-36 124.5 0.2 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_R PF05001.13 BAM41403.1 - 2.8e-11 43.2 214.8 0.0052 17.1 12.3 13.4 5 3 6 15 15 15 11 RNA polymerase Rpb1 C-terminal repeat RNA_pol_Rpb1_7 PF04990.12 BAM41403.1 - 5.9e-07 29.6 3.4 2e-06 27.8 1.0 2.4 1 1 1 2 2 2 1 RNA polymerase Rpb1, domain 7 dNK PF01712.19 BAM41403.1 - 0.084 12.7 0.5 0.18 11.6 0.5 1.5 1 0 0 1 1 1 0 Deoxynucleoside kinase CDC50 PF03381.15 BAM41404.1 - 1.4e-25 90.4 0.5 3.2e-25 89.2 0.1 1.7 1 1 1 2 2 2 1 LEM3 (ligand-effect modulator 3) family / CDC50 family Cpn60_TCP1 PF00118.24 BAM41405.1 - 1.3e-143 479.2 4.8 1.6e-143 479.0 4.8 1.1 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Rax2 PF12768.7 BAM41406.1 - 0.12 11.8 0.1 0.19 11.2 0.1 1.3 1 0 0 1 1 1 0 Cortical protein marker for cell polarity FAINT PF04385.15 BAM41407.1 - 1.3e-15 57.2 0.8 6.4e-06 26.1 0.6 4.6 4 0 0 4 4 4 4 Domain of unknown function, DUF529 Methyltransf_16 PF10294.9 BAM41408.1 - 7.2e-14 51.9 0.7 7.4e-06 25.8 0.3 2.3 1 1 0 2 2 2 2 Lysine methyltransferase Methyltransf_23 PF13489.6 BAM41408.1 - 6e-10 39.2 0.0 1.1e-09 38.3 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAM41408.1 - 7.1e-05 22.6 0.2 0.0034 17.2 0.0 2.5 2 1 1 3 3 3 1 Methyltransferase domain Methyltransf_12 PF08242.12 BAM41408.1 - 0.00032 21.4 0.0 0.054 14.2 0.0 2.4 2 0 0 2 2 2 1 Methyltransferase domain DUF5462 PF17547.2 BAM41408.1 - 0.00042 19.7 0.8 0.0031 16.9 0.1 2.4 3 0 0 3 3 3 1 Family of unknown function (DUF5462) Methyltransf_25 PF13649.6 BAM41408.1 - 0.0012 19.5 0.0 0.34 11.6 0.0 2.4 2 0 0 2 2 2 1 Methyltransferase domain MTS PF05175.14 BAM41408.1 - 0.018 14.6 0.0 0.084 12.4 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase small domain Methyltransf_11 PF08241.12 BAM41408.1 - 0.034 14.8 0.0 0.71 10.6 0.0 2.4 1 1 0 2 2 2 0 Methyltransferase domain UPF0086 PF01868.16 BAM41408.1 - 0.047 13.6 0.0 0.11 12.4 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function UPF0086 DUF4878 PF12870.7 BAM41408.1 - 0.15 12.4 0.3 0.15 12.4 0.3 2.2 3 0 0 3 3 3 0 Domain of unknown function (DUF4878) Ank_2 PF12796.7 BAM41410.1 - 5.5e-30 103.8 0.4 2.9e-14 53.4 0.0 3.6 2 1 1 3 3 3 3 Ankyrin repeats (3 copies) Ank_4 PF13637.6 BAM41410.1 - 3.4e-25 88.1 0.1 1.2e-09 38.6 0.0 4.2 3 1 2 5 5 5 4 Ankyrin repeats (many copies) RNA_GG_bind PF10258.9 BAM41410.1 - 8.5e-25 86.6 0.0 2.8e-24 84.9 0.0 2.0 1 0 0 1 1 1 1 PHAX RNA-binding domain Ank_5 PF13857.6 BAM41410.1 - 4.2e-20 71.6 0.6 0.00017 21.8 0.0 6.2 1 1 5 6 6 6 5 Ankyrin repeats (many copies) Ank_3 PF13606.6 BAM41410.1 - 2.2e-18 64.4 0.2 0.0026 18.1 0.0 6.1 5 0 0 5 5 5 3 Ankyrin repeat Ank PF00023.30 BAM41410.1 - 1.3e-17 63.4 0.0 0.0003 21.1 0.0 5.8 6 0 0 6 6 6 3 Ankyrin repeat PhoD PF09423.10 BAM41410.1 - 1.5e-09 37.3 0.9 2.5e-06 26.8 0.0 2.8 3 0 0 3 3 3 2 PhoD-like phosphatase Metallophos PF00149.28 BAM41410.1 - 0.1 13.1 0.0 0.83 10.1 0.0 2.5 3 0 0 3 3 3 0 Calcineurin-like phosphoesterase SAP PF02037.27 BAM41411.1 - 2.2e-11 43.3 0.0 5.7e-11 41.9 0.0 1.8 1 0 0 1 1 1 1 SAP domain CAP_C PF08603.11 BAM41412.1 - 1e-36 125.9 9.1 1.1e-36 125.8 9.1 1.0 1 0 0 1 1 1 1 Adenylate cyclase associated (CAP) C terminal TBCC PF07986.12 BAM41412.1 - 1.7e-05 24.6 3.9 2.1e-05 24.2 3.9 1.2 1 0 0 1 1 1 1 Tubulin binding cofactor C SLATT_4 PF18186.1 BAM41413.1 - 0.059 13.0 0.5 0.096 12.3 0.5 1.2 1 0 0 1 1 1 0 SMODS and SLOG-associating 2TM effector domain family 4 TIC20 PF16166.5 BAM41413.1 - 0.081 12.7 0.5 0.13 12.0 0.5 1.3 1 0 0 1 1 1 0 Chloroplast import apparatus Tic20-like Hemagglutinin PF00509.18 BAM41413.1 - 0.27 9.6 0.1 0.64 8.4 0.0 1.6 2 0 0 2 2 2 0 Haemagglutinin FtsJ PF01728.19 BAM41415.1 - 1.4e-35 123.0 0.1 3.8e-25 89.0 0.0 2.4 2 0 0 2 2 2 2 FtsJ-like methyltransferase Beta-Casp PF10996.8 BAM41416.1 - 1.3e-22 80.1 0.0 5.1e-22 78.3 0.0 2.1 1 0 0 1 1 1 1 Beta-Casp domain RMMBL PF07521.12 BAM41416.1 - 8.3e-19 67.3 0.1 2e-18 66.1 0.1 1.7 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_6 PF16661.5 BAM41416.1 - 5.1e-15 55.4 0.0 1.1e-14 54.3 0.0 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B PF00753.27 BAM41416.1 - 9.8e-09 35.5 0.4 8.5e-06 25.9 0.3 3.2 2 1 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 BAM41416.1 - 9.3e-07 28.5 0.0 3.6e-06 26.6 0.0 1.9 2 1 0 2 2 2 1 Beta-lactamase superfamily domain DUF1664 PF07889.12 BAM41416.1 - 0.49 10.4 2.3 1.4 8.9 0.6 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) DUF5071 PF16804.5 BAM41417.1 - 0.27 11.5 0.0 0.27 11.5 0.0 3.5 4 0 0 4 4 4 0 Domain of unknown function (DUF5071) Striatin PF08232.12 BAM41417.1 - 0.75 10.4 3.8 0.64 10.6 1.3 2.1 2 0 0 2 2 2 0 Striatin family Dsh_C PF12316.8 BAM41417.1 - 4 7.8 6.0 11 6.3 6.0 1.7 1 0 0 1 1 1 0 Segment polarity protein dishevelled (Dsh) C terminal V-SNARE PF05008.15 BAM41418.1 - 0.082 13.3 0.6 0.19 12.1 0.6 1.6 1 0 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus ABC_tran PF00005.27 BAM41420.1 - 1.4e-17 64.4 5.7 5.4e-13 49.6 0.2 4.6 4 1 0 4 4 4 2 ABC transporter ABC_membrane PF00664.23 BAM41420.1 - 7.8e-11 42.1 13.8 7.8e-11 42.1 13.8 3.3 3 0 0 3 3 3 3 ABC transporter transmembrane region RsgA_GTPase PF03193.16 BAM41420.1 - 0.024 14.6 0.3 0.056 13.3 0.3 1.6 1 0 0 1 1 1 0 RsgA GTPase MMR_HSR1 PF01926.23 BAM41420.1 - 0.053 13.6 0.0 0.2 11.8 0.0 2.1 1 0 0 1 1 1 0 50S ribosome-binding GTPase AAA_29 PF13555.6 BAM41420.1 - 0.15 11.9 0.5 0.41 10.4 0.5 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain Fe_hyd_lg_C PF02906.14 BAM41421.1 - 5.3e-37 127.8 4.2 4.1e-21 75.8 0.1 4.2 3 1 0 3 3 3 2 Iron only hydrogenase large subunit, C-terminal domain DUF4220 PF13968.6 BAM41423.1 - 0.0044 16.5 0.7 0.012 15.1 0.1 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF4220) DUF4768 PF15989.5 BAM41423.1 - 0.11 12.4 1.9 0.24 11.3 1.9 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4768) Ribosomal_L19e PF01280.20 BAM41425.1 - 4.6e-59 198.6 5.5 4.6e-59 198.6 5.5 1.6 1 1 1 2 2 2 1 Ribosomal protein L19e HMw1_D2 PF18254.1 BAM41425.1 - 0.037 14.4 0.4 0.075 13.4 0.4 1.5 1 0 0 1 1 1 0 HMW1 domain 2 HhH-GPD PF00730.25 BAM41426.1 - 7.7e-24 84.2 0.1 6.3e-23 81.3 0.0 2.5 2 1 0 2 2 2 1 HhH-GPD superfamily base excision DNA repair protein HHH PF00633.23 BAM41426.1 - 1.2e-06 28.1 0.0 3e-06 26.8 0.0 1.7 1 0 0 1 1 1 1 Helix-hairpin-helix motif HHH_8 PF14716.6 BAM41426.1 - 0.00065 20.0 0.0 0.0019 18.5 0.0 1.8 1 0 0 1 1 1 1 Helix-hairpin-helix domain HHH_5 PF14520.6 BAM41426.1 - 0.058 14.0 0.1 0.15 12.7 0.1 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix domain Cdd1 PF11731.8 BAM41426.1 - 0.085 13.1 0.0 0.22 11.8 0.0 1.7 1 0 0 1 1 1 0 Pathogenicity locus Histone_HNS PF00816.21 BAM41426.1 - 0.14 13.0 3.2 39 5.2 0.1 3.4 3 0 0 3 3 3 0 H-NS histone family F-box PF00646.33 BAM41427.1 - 0.00059 19.6 2.2 0.091 12.7 0.0 2.6 2 0 0 2 2 2 2 F-box domain DUF4898 PF16239.5 BAM41428.1 - 0.024 14.6 0.1 0.036 14.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4898) Adaptin_binding PF10199.9 BAM41428.1 - 0.036 14.7 0.8 0.049 14.2 0.8 1.2 1 0 0 1 1 1 0 Alpha and gamma adaptin binding protein p34 AdoHcyase PF05221.17 BAM41429.1 - 3.7e-72 243.0 0.0 4.5e-72 242.7 0.0 1.0 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 BAM41429.1 - 1.6e-49 168.0 0.9 2.6e-49 167.4 0.9 1.3 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 BAM41429.1 - 8.1e-06 25.3 0.2 1.5e-05 24.4 0.2 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THF_DHG_CYH_C PF02882.19 BAM41429.1 - 0.0031 16.8 0.5 0.017 14.4 0.5 1.9 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain IlvN PF07991.12 BAM41429.1 - 0.032 13.8 0.0 0.051 13.2 0.0 1.3 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain TrkA_N PF02254.18 BAM41429.1 - 0.13 12.5 0.2 0.36 11.1 0.2 1.8 1 1 0 1 1 1 0 TrkA-N domain PLC-beta_C PF08703.10 BAM41430.1 - 0.021 14.8 0.4 0.043 13.8 0.4 1.4 1 0 0 1 1 1 0 PLC-beta C terminal GWT1 PF06423.12 BAM41432.1 - 1.7e-09 38.0 9.6 1.7e-09 38.0 9.6 3.7 2 2 1 3 3 3 1 GWT1 eIF3_subunit PF08597.10 BAM41433.1 - 1.4e-12 48.0 4.3 1.9e-12 47.6 4.3 1.2 1 0 0 1 1 1 1 Translation initiation factor eIF3 subunit DUF327 PF03885.13 BAM41433.1 - 0.13 12.2 0.3 0.13 12.2 0.3 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF327) DUF2721 PF11026.8 BAM41435.1 - 1.3 8.9 5.1 4.4 7.2 5.1 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF2721) Histone PF00125.24 BAM41436.1 - 4.9e-51 172.5 2.4 5.5e-51 172.3 2.4 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.6 BAM41436.1 - 4.9e-05 23.6 0.0 7.7e-05 23.0 0.0 1.3 1 0 0 1 1 1 1 CENP-S protein PAF PF15715.5 BAM41436.1 - 0.00032 21.3 1.2 0.00038 21.1 1.2 1.1 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CENP-T_C PF15511.6 BAM41436.1 - 0.00035 20.6 0.6 0.00051 20.1 0.1 1.6 2 0 0 2 2 2 1 Centromere kinetochore component CENP-T histone fold CBFD_NFYB_HMF PF00808.23 BAM41436.1 - 0.014 15.7 0.7 0.022 15.0 0.0 1.7 2 0 0 2 2 2 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 BAM41436.1 - 0.046 13.8 0.3 0.081 13.0 0.1 1.5 2 0 0 2 2 2 0 Transcription initiation factor IID, 31kD subunit FAINT PF04385.15 BAM41438.1 - 0.0001 22.3 0.0 0.00021 21.3 0.0 1.6 1 0 0 1 1 1 1 Domain of unknown function, DUF529 DUF5634 PF18681.1 BAM41438.1 - 0.059 13.7 0.3 0.87 10.0 0.3 2.2 1 1 0 1 1 1 0 Family of unknown function (DUF5634) FAINT PF04385.15 BAM41440.1 - 8.8e-11 41.7 12.4 1.8e-05 24.7 0.0 4.5 4 0 0 4 4 4 2 Domain of unknown function, DUF529 VEFS-Box PF09733.9 BAM41440.1 - 0.034 13.9 0.7 0.034 13.9 0.7 2.2 1 1 1 2 2 2 0 VEFS-Box of polycomb protein FAINT PF04385.15 BAM41441.1 - 9.3e-18 64.1 40.8 9.5e-05 22.4 0.5 10.7 10 0 0 10 10 10 8 Domain of unknown function, DUF529 GSDH PF07995.11 BAM41441.1 - 0.021 14.1 0.2 0.054 12.8 0.2 1.6 1 0 0 1 1 1 0 Glucose / Sorbosone dehydrogenase LXG PF04740.12 BAM41442.1 - 0.0043 16.8 10.7 0.0043 16.8 10.7 4.5 2 1 1 4 4 4 2 LXG domain of WXG superfamily FUSC PF04632.12 BAM41442.1 - 0.15 10.6 1.2 0.27 9.7 0.9 1.5 1 1 0 1 1 1 0 Fusaric acid resistance protein family Retrotran_gag_2 PF14223.6 BAM41442.1 - 3.1 7.5 24.1 3.9 7.1 0.6 3.3 2 1 1 3 3 3 0 gag-polypeptide of LTR copia-type kleA_kleC PF17383.2 BAM41442.1 - 4.5 7.7 7.6 5.1 7.5 1.9 3.2 3 1 0 3 3 3 0 Uncharacterized KorC regulated protein A Adaptin_N PF01602.20 BAM41443.1 - 7.7e-56 189.7 15.6 9.7e-56 189.4 15.6 1.1 1 0 0 1 1 1 1 Adaptin N terminal region Alpha_adaptinC2 PF02883.20 BAM41443.1 - 0.026 14.8 0.1 0.083 13.2 0.1 1.9 1 0 0 1 1 1 0 Adaptin C-terminal domain HEAT_2 PF13646.6 BAM41443.1 - 0.076 13.4 0.0 2.5 8.6 0.1 2.7 2 0 0 2 2 2 0 HEAT repeats BAP PF06639.11 BAM41443.1 - 0.12 12.8 0.2 0.39 11.1 0.2 1.9 1 0 0 1 1 1 0 Basal layer antifungal peptide (BAP) HEAT PF02985.22 BAM41443.1 - 0.21 11.9 0.5 4.8 7.7 0.0 3.3 3 0 0 3 3 3 0 HEAT repeat Longin PF13774.6 BAM41444.1 - 0.066 13.3 0.0 0.39 10.8 0.0 1.9 2 0 0 2 2 2 0 Regulated-SNARE-like domain Aquarius_N PF16399.5 BAM41445.1 - 2.3e-68 231.0 38.7 1.2e-41 142.7 14.4 4.3 3 2 0 3 3 3 2 Intron-binding protein aquarius N-terminus AAA_11 PF13086.6 BAM41445.1 - 2.9e-29 102.7 1.6 4.4e-29 102.1 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA_12 PF13087.6 BAM41445.1 - 2.1e-26 92.8 0.1 2.1e-26 92.8 0.1 3.3 4 0 0 4 4 4 1 AAA domain AAA_19 PF13245.6 BAM41445.1 - 2e-05 25.0 0.0 5.6e-05 23.5 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 BAM41445.1 - 0.00033 20.4 0.0 0.14 11.8 0.0 2.4 2 0 0 2 2 2 2 AAA domain UvrD_C_2 PF13538.6 BAM41445.1 - 0.0044 16.8 0.1 0.01 15.6 0.1 1.6 1 0 0 1 1 1 1 UvrD-like helicase C-terminal domain Viral_helicase1 PF01443.18 BAM41445.1 - 0.0075 16.0 0.0 0.66 9.7 0.0 3.2 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase AAA_16 PF13191.6 BAM41445.1 - 0.011 16.2 0.0 0.047 14.1 0.0 2.1 1 1 1 2 2 2 0 AAA ATPase domain AAA_22 PF13401.6 BAM41445.1 - 0.069 13.4 0.1 0.44 10.8 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 BAM41445.1 - 0.099 12.6 0.0 0.42 10.6 0.0 2.1 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_25 PF13481.6 BAM41445.1 - 0.13 11.8 0.0 0.33 10.5 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA PF00004.29 BAM41445.1 - 0.15 12.5 0.0 0.5 10.8 0.0 1.9 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) ArsA_ATPase PF02374.15 BAM41447.1 - 3.1e-85 286.0 2.0 1.6e-78 264.0 0.2 2.1 1 1 1 2 2 2 2 Anion-transporting ATPase CbiA PF01656.23 BAM41447.1 - 2.3e-11 43.9 0.0 9.9e-11 41.8 0.0 2.0 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 BAM41447.1 - 8.3e-11 42.1 0.1 3.7e-10 40.0 0.0 2.1 2 1 0 2 2 2 1 AAA domain ParA PF10609.9 BAM41447.1 - 1.4e-06 28.0 0.2 0.00013 21.5 0.0 2.3 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase CBP_BcsQ PF06564.12 BAM41447.1 - 2e-06 27.5 0.0 9.3e-06 25.3 0.0 2.1 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ SRP54 PF00448.22 BAM41447.1 - 0.00024 20.8 0.0 0.0032 17.1 0.0 2.3 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain Fer4_NifH PF00142.18 BAM41447.1 - 0.002 17.7 0.0 0.004 16.6 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family NB-ARC PF00931.22 BAM41447.1 - 0.0023 17.2 0.0 0.0048 16.1 0.0 1.6 1 0 0 1 1 1 1 NB-ARC domain PIF1 PF05970.14 BAM41447.1 - 0.0029 16.8 0.2 0.016 14.4 0.0 2.1 3 0 0 3 3 3 1 PIF1-like helicase Zeta_toxin PF06414.12 BAM41447.1 - 0.0032 16.8 0.0 0.0063 15.8 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin ATP_bind_1 PF03029.17 BAM41447.1 - 0.0099 15.7 0.8 0.038 13.8 0.0 2.2 2 1 1 3 3 3 1 Conserved hypothetical ATP binding protein AAA_16 PF13191.6 BAM41447.1 - 0.011 16.1 0.0 0.027 14.8 0.0 1.7 1 0 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 BAM41447.1 - 0.016 15.8 0.2 0.043 14.3 0.2 2.0 1 1 0 1 1 1 0 AAA domain DUF1685 PF07939.11 BAM41447.1 - 0.038 13.7 0.0 0.37 10.6 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1685) AAA_24 PF13479.6 BAM41447.1 - 0.048 13.4 0.3 0.26 11.0 0.0 2.4 3 1 0 3 3 3 0 AAA domain APS_kinase PF01583.20 BAM41447.1 - 0.06 13.2 0.0 0.18 11.7 0.0 1.7 2 0 0 2 2 2 0 Adenylylsulphate kinase T2SSE PF00437.20 BAM41447.1 - 0.17 10.9 0.0 0.3 10.1 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein Nod1 PF17114.5 BAM41447.1 - 0.28 11.3 4.5 0.18 11.9 1.1 2.5 1 1 2 3 3 3 0 Gef2-related medial cortical node protein Nod1 Arm PF00514.23 BAM41448.1 - 0.0016 18.4 0.0 1.1 9.4 0.0 3.6 3 1 0 3 3 3 2 Armadillo/beta-catenin-like repeat Pkinase PF00069.25 BAM41449.1 - 6.3e-58 196.2 0.1 7.5e-44 150.1 0.0 3.2 4 0 0 4 4 4 2 Protein kinase domain Pkinase_Tyr PF07714.17 BAM41449.1 - 3.2e-26 92.2 0.0 2e-17 63.3 0.0 2.3 2 0 0 2 2 2 2 Protein tyrosine kinase Haspin_kinase PF12330.8 BAM41449.1 - 0.0001 21.4 0.1 0.022 13.7 0.0 2.2 2 0 0 2 2 2 2 Haspin like kinase domain KdpA PF03814.15 BAM41449.1 - 0.23 9.6 0.0 0.36 9.0 0.0 1.2 1 0 0 1 1 1 0 Potassium-transporting ATPase A subunit Syntaxin_2 PF14523.6 BAM41450.1 - 3.3 8.1 14.4 3.5 8.1 0.2 3.4 3 0 0 3 3 3 0 Syntaxin-like protein tRNA-synt_1g PF09334.11 BAM41451.1 - 4.9e-79 265.9 2.8 7.8e-44 150.0 1.9 4.0 3 1 0 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 BAM41451.1 - 1.5e-34 119.2 1.3 3.9e-18 65.0 0.0 3.9 2 1 1 3 3 3 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1e PF01406.19 BAM41451.1 - 2.3e-13 50.1 0.1 1.9e-06 27.5 0.2 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 BAM41451.1 - 0.0013 17.7 0.0 0.05 12.5 0.0 2.2 2 0 0 2 2 2 1 tRNA synthetases class I (K) DASH_Duo1 PF08651.10 BAM41451.1 - 0.14 11.9 0.1 0.41 10.5 0.1 1.7 1 0 0 1 1 1 0 DASH complex subunit Duo1 SOAR PF16533.5 BAM41452.1 - 0.00022 21.1 2.0 0.00022 21.1 2.0 1.9 1 1 1 2 2 2 1 STIM1 Orai1-activating region RNA_pol_Rpb4 PF03874.16 BAM41453.1 - 0.018 15.3 0.6 0.018 15.3 0.6 1.9 1 1 1 2 2 2 0 RNA polymerase Rpb4 DUF3829 PF12889.7 BAM41453.1 - 0.063 12.8 0.1 0.077 12.5 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3829) DUF4208 PF13907.6 BAM41453.1 - 0.069 13.6 1.1 0.13 12.7 0.4 1.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4208) Microcin PF03526.13 BAM41453.1 - 0.23 11.3 4.0 0.2 11.5 0.5 2.5 2 1 1 3 3 3 0 Colicin E1 (microcin) immunity protein Meiotic_rec114 PF03525.14 BAM41454.1 - 0.05 12.6 0.0 0.066 12.2 0.0 1.1 1 0 0 1 1 1 0 Meiotic recombination protein rec114 DUF4736 PF15883.5 BAM41454.1 - 0.08 12.7 0.0 0.099 12.4 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4736) HPIH PF13323.6 BAM41455.1 - 0.08 12.8 0.9 0.099 12.5 0.9 1.2 1 0 0 1 1 1 0 N-terminal domain with HPIH motif GET2 PF08690.10 BAM41455.1 - 2.7 7.6 5.7 3 7.4 5.7 1.0 1 0 0 1 1 1 0 GET complex subunit GET2 DHHC PF01529.20 BAM41455.1 - 5 7.2 7.7 5.7 7.1 7.7 1.1 1 0 0 1 1 1 0 DHHC palmitoyltransferase ATG27 PF09451.10 BAM41455.1 - 8.7 6.1 5.8 8.8 6.1 5.8 1.3 1 1 0 1 1 1 0 Autophagy-related protein 27 FAINT PF04385.15 BAM41456.1 - 5.5e-21 74.4 34.8 3.1e-05 24.0 1.4 5.8 5 1 0 5 5 5 5 Domain of unknown function, DUF529 Dioxygenase_C PF00775.21 BAM41456.1 - 0.0079 15.7 0.1 0.93 8.9 0.0 3.1 3 0 0 3 3 3 1 Dioxygenase TRIC PF05197.13 BAM41456.1 - 0.013 15.1 0.2 0.022 14.3 0.2 1.3 1 0 0 1 1 1 0 TRIC channel CALCOCO1 PF07888.11 BAM41456.1 - 0.24 10.3 0.3 0.37 9.6 0.3 1.2 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like FAINT PF04385.15 BAM41457.1 - 0.029 14.4 15.8 0.065 13.3 0.6 4.4 4 0 0 4 4 4 0 Domain of unknown function, DUF529 Phage_Gp19 PF09355.10 BAM41459.1 - 0.14 12.6 0.9 0.29 11.6 0.3 1.7 1 1 1 2 2 2 0 Phage protein Gp19/Gp15/Gp42 Ribosomal_L18p PF00861.22 BAM41460.1 - 1.6e-20 73.6 0.6 1.4e-19 70.6 0.6 2.0 1 1 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DUF4925 PF16272.5 BAM41461.1 - 0.044 13.3 0.2 0.085 12.3 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4925) FAINT PF04385.15 BAM41463.1 - 1.2e-25 89.3 55.9 1.4e-05 25.1 1.9 8.1 7 2 0 7 7 7 7 Domain of unknown function, DUF529 Sec1 PF00995.23 BAM41465.1 - 9e-88 295.9 9.0 1.1e-87 295.7 9.0 1.0 1 0 0 1 1 1 1 Sec1 family FAINT PF04385.15 BAM41466.1 - 4.3e-25 87.6 32.6 0.00016 21.7 1.8 6.7 6 1 0 6 6 6 6 Domain of unknown function, DUF529 FAINT PF04385.15 BAM41467.1 - 3.3e-11 43.1 21.6 2.3e-05 24.4 7.2 2.4 2 0 0 2 2 2 2 Domain of unknown function, DUF529 NusG_II PF07009.11 BAM41467.1 - 4.4 7.5 6.0 2.2 8.5 1.3 2.3 2 0 0 2 2 2 0 NusG domain II FAINT PF04385.15 BAM41468.1 - 6.7e-11 42.1 23.8 0.00043 20.3 0.4 4.8 5 0 0 5 5 5 4 Domain of unknown function, DUF529 FAINT PF04385.15 BAM41469.1 - 0.004 17.2 24.3 0.005 16.9 1.8 4.1 4 0 0 4 4 4 3 Domain of unknown function, DUF529 Ub-RnfH PF03658.14 BAM41469.1 - 0.0065 16.8 0.1 0.05 14.0 0.0 2.2 2 0 0 2 2 2 1 RnfH family Ubiquitin DUF3558 PF12079.8 BAM41469.1 - 0.013 15.5 0.0 0.035 14.1 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3558) Myosin_N PF02736.19 BAM41469.1 - 0.067 13.0 0.1 0.15 11.9 0.1 1.5 1 0 0 1 1 1 0 Myosin N-terminal SH3-like domain LMF1 PF06762.14 BAM41470.1 - 1e-85 288.5 1.9 2.1e-85 287.5 1.9 1.5 1 0 0 1 1 1 1 Lipase maturation factor Pyr_redox_2 PF07992.14 BAM41471.1 - 7.4e-58 196.1 0.0 1.1e-57 195.5 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 BAM41471.1 - 2.7e-20 72.6 0.0 4.9e-20 71.8 0.0 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 BAM41471.1 - 4.5e-18 65.6 0.2 9.5e-15 54.9 0.0 2.7 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 BAM41471.1 - 6.1e-15 55.3 0.0 2.4e-12 46.7 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 BAM41471.1 - 7.8e-06 25.2 0.1 0.00039 19.6 0.2 2.2 2 0 0 2 2 2 1 FAD binding domain FAD_oxidored PF12831.7 BAM41471.1 - 0.00011 21.6 0.1 0.00044 19.7 0.1 1.9 2 0 0 2 2 2 1 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 BAM41471.1 - 0.00024 20.4 0.0 0.075 12.3 0.0 2.3 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain HI0933_like PF03486.14 BAM41471.1 - 0.00025 19.9 0.1 0.0021 16.9 0.1 2.2 3 0 0 3 3 3 1 HI0933-like protein K_oxygenase PF13434.6 BAM41471.1 - 0.00047 19.4 0.0 0.0042 16.3 0.0 2.1 2 0 0 2 2 2 1 L-lysine 6-monooxygenase (NADPH-requiring) GIDA PF01134.22 BAM41471.1 - 0.00061 19.0 0.1 0.0011 18.2 0.1 1.4 1 0 0 1 1 1 1 Glucose inhibited division protein A Thi4 PF01946.17 BAM41471.1 - 0.021 14.1 0.0 0.039 13.2 0.0 1.4 1 0 0 1 1 1 0 Thi4 family NAD_binding_8 PF13450.6 BAM41471.1 - 0.043 14.1 0.1 0.043 14.1 0.1 1.9 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain DAO PF01266.24 BAM41471.1 - 0.05 13.2 0.0 3 7.3 0.0 2.2 2 0 0 2 2 2 0 FAD dependent oxidoreductase Amino_oxidase PF01593.24 BAM41471.1 - 0.069 12.4 0.0 0.11 11.7 0.0 1.3 1 0 0 1 1 1 0 Flavin containing amine oxidoreductase Cnd2 PF05786.14 BAM41472.1 - 2.6e-27 95.9 3.3 2.3e-10 39.9 0.1 4.1 3 1 0 3 3 3 3 Condensin complex subunit 2 CNDH2_N PF06278.11 BAM41472.1 - 0.0011 19.1 0.3 0.0056 16.9 0.1 2.3 2 0 0 2 2 2 1 Condensin II complex subunit CAP-H2 or CNDH2, N-terminal Sec34 PF04136.15 BAM41474.1 - 0.054 13.4 0.2 0.054 13.4 0.2 2.4 2 1 0 2 2 2 0 Sec34-like family Lipoprotein_20 PF13942.6 BAM41474.1 - 0.25 11.2 5.4 0.44 10.4 5.4 1.3 1 0 0 1 1 1 0 YfhG lipoprotein COG5 PF10392.9 BAM41474.1 - 0.55 10.4 5.7 6 7.1 0.3 2.6 2 0 0 2 2 2 0 Golgi transport complex subunit 5 NPV_P10 PF05531.12 BAM41474.1 - 0.82 10.2 8.6 1.8 9.1 0.5 3.4 4 0 0 4 4 4 0 Nucleopolyhedrovirus P10 protein Occludin_ELL PF07303.13 BAM41474.1 - 5.3 7.8 7.2 1 10.1 0.7 2.7 2 0 0 2 2 2 0 Occludin homology domain SDA1 PF05285.12 BAM41475.1 - 1.8e-05 24.4 18.0 1.8e-05 24.4 18.0 2.4 2 1 0 2 2 2 1 SDA1 DUF3615 PF12274.8 BAM41475.1 - 0.13 12.8 2.5 0.26 11.8 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function (DUF3615) Tfb5 PF06331.12 BAM41476.1 - 6.2e-19 67.7 0.5 7.6e-19 67.5 0.5 1.1 1 0 0 1 1 1 1 Transcription factor TFIIH complex subunit Tfb5 Arf PF00025.21 BAM41477.1 - 8.8e-65 217.4 1.6 1e-64 217.2 1.6 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family Roc PF08477.13 BAM41477.1 - 6.1e-13 49.0 0.2 8.3e-13 48.6 0.2 1.2 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase G-alpha PF00503.20 BAM41477.1 - 1.9e-12 47.0 4.7 4.7e-08 32.6 0.8 2.2 1 1 1 2 2 2 2 G-protein alpha subunit SRPRB PF09439.10 BAM41477.1 - 9e-10 38.3 0.1 1.2e-09 37.9 0.1 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 BAM41477.1 - 3.4e-09 36.5 0.1 3.9e-09 36.3 0.1 1.1 1 0 0 1 1 1 1 Ras family Gtr1_RagA PF04670.12 BAM41477.1 - 4e-09 36.2 0.1 4.7e-09 35.9 0.1 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region MMR_HSR1 PF01926.23 BAM41477.1 - 1.7e-07 31.3 0.1 2.4e-07 30.8 0.1 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase AAA_18 PF13238.6 BAM41477.1 - 0.00017 22.1 0.0 0.00025 21.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain GTP_EFTU PF00009.27 BAM41477.1 - 0.0047 16.5 0.1 0.12 11.9 0.1 2.1 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain AAA_14 PF13173.6 BAM41477.1 - 0.02 14.9 0.4 0.046 13.8 0.4 1.8 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 BAM41477.1 - 0.079 13.5 0.2 0.12 12.9 0.2 1.6 1 1 0 1 1 1 0 ABC transporter HEAT_2 PF13646.6 BAM41479.1 - 0.0011 19.3 0.0 0.0046 17.3 0.0 2.1 1 1 1 2 2 2 1 HEAT repeats DRE2_N PF16803.5 BAM41479.1 - 0.0036 17.6 0.0 3.2 8.0 0.5 2.8 2 0 0 2 2 2 2 Fe-S cluster assembly protein DRE2 N-terminus HEAT PF02985.22 BAM41479.1 - 0.04 14.2 0.1 4.8 7.7 0.0 3.5 3 0 0 3 3 3 0 HEAT repeat Keratin PF02422.16 BAM41479.1 - 1.3 8.8 4.9 0.4 10.4 0.1 2.7 2 0 0 2 2 2 0 Keratin Transket_pyr PF02779.24 BAM41485.1 - 4.6e-51 173.0 0.0 7e-51 172.4 0.0 1.3 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain E1_dh PF00676.20 BAM41485.1 - 1.6e-38 132.4 0.0 2.9e-38 131.5 0.0 1.3 1 0 0 1 1 1 1 Dehydrogenase E1 component OxoGdeHyase_C PF16870.5 BAM41485.1 - 2.7e-38 131.1 0.0 6.7e-38 129.8 0.0 1.7 1 1 0 1 1 1 1 2-oxoglutarate dehydrogenase C-terminal 2-oxogl_dehyd_N PF16078.5 BAM41485.1 - 2.7e-07 30.1 3.1 6.1e-07 28.9 3.1 1.6 1 0 0 1 1 1 1 2-oxoglutarate dehydrogenase N-terminus SF3A3 PF16837.5 BAM41485.1 - 0.15 12.6 4.5 0.57 10.7 1.7 2.7 2 0 0 2 2 2 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 FAINT PF04385.15 BAM41487.1 - 5.1e-21 74.5 16.7 8.9e-07 28.9 1.2 3.3 3 0 0 3 3 3 3 Domain of unknown function, DUF529 DUF3481 PF11980.8 BAM41488.1 - 0.047 13.4 1.0 0.37 10.5 0.0 2.5 2 0 0 2 2 2 0 C-terminal domain of neuropilin glycoprotein SOG2 PF10428.9 BAM41488.1 - 2.7 7.1 23.1 3.9 6.6 23.1 1.2 1 0 0 1 1 1 0 RAM signalling pathway protein CCD PF07860.11 BAM41490.1 - 0.076 13.1 0.6 0.16 12.0 0.0 1.8 2 0 0 2 2 2 0 WisP family C-Terminal Region MMR_HSR1 PF01926.23 BAM41491.1 - 1.9e-10 40.8 0.1 4.2e-10 39.7 0.1 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU PF00009.27 BAM41491.1 - 5.1e-08 32.7 0.1 2.5e-05 23.9 0.1 2.4 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain Dynamin_N PF00350.23 BAM41491.1 - 2.4e-07 31.0 0.2 0.01 15.9 0.1 2.9 2 1 1 3 3 3 2 Dynamin family RsgA_GTPase PF03193.16 BAM41491.1 - 7.2e-07 29.3 2.0 0.014 15.3 0.2 2.6 2 0 0 2 2 2 2 RsgA GTPase MMR_HSR1_Xtn PF16897.5 BAM41491.1 - 0.0066 16.4 0.7 0.035 14.1 0.7 2.4 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain Evr1_Alr PF04777.13 BAM41492.1 - 2.3e-07 31.2 0.2 2.9e-07 30.9 0.2 1.2 1 0 0 1 1 1 1 Erv1 / Alr family CRAL_TRIO PF00650.20 BAM41493.1 - 3.4e-34 117.9 0.2 4.6e-34 117.4 0.2 1.2 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 BAM41493.1 - 8.8e-07 29.2 0.1 1.4e-06 28.5 0.1 1.3 1 0 0 1 1 1 1 Divergent CRAL/TRIO domain SNF2_N PF00176.23 BAM41494.1 - 3.2e-52 177.4 0.7 3.2e-52 177.4 0.7 1.7 2 0 0 2 2 2 1 SNF2 family N-terminal domain Helicase_C PF00271.31 BAM41494.1 - 1.9e-22 79.7 0.3 4e-20 72.2 0.0 3.3 2 0 0 2 2 2 1 Helicase conserved C-terminal domain Bromodomain PF00439.25 BAM41494.1 - 1.4e-15 57.1 0.9 1.4e-15 57.1 0.9 2.6 2 0 0 2 2 2 1 Bromodomain ResIII PF04851.15 BAM41494.1 - 3.1e-12 46.8 0.0 3.1e-12 46.8 0.0 3.6 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit RNase_HII PF01351.18 BAM41495.1 - 0.062 13.1 0.9 0.076 12.8 0.9 1.2 1 0 0 1 1 1 0 Ribonuclease HII DUF29 PF01724.16 BAM41495.1 - 0.069 13.4 0.9 0.097 12.9 0.9 1.2 1 0 0 1 1 1 0 Domain of unknown function DUF29 TFIIS_M PF07500.14 BAM41497.1 - 7.3e-13 49.0 1.6 1.3e-12 48.2 1.6 1.4 1 0 0 1 1 1 1 Transcription factor S-II (TFIIS), central domain Gp-FAR-1 PF05823.12 BAM41497.1 - 0.016 15.6 0.3 0.03 14.7 0.3 1.4 1 0 0 1 1 1 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) DUF3446 PF11928.8 BAM41497.1 - 4.6 7.6 13.7 1.8 8.9 6.2 2.5 2 0 0 2 2 2 0 Early growth response N-terminal domain CortBP2 PF09727.9 BAM41499.1 - 7e-05 22.8 3.6 0.066 13.1 0.1 2.4 2 0 0 2 2 2 2 Cortactin-binding protein-2 CAP_GLY PF01302.25 BAM41499.1 - 0.14 12.2 1.2 2.2 8.3 0.1 3.0 3 0 0 3 3 3 0 CAP-Gly domain Inhibitor_I53 PF11714.8 BAM41499.1 - 0.28 11.4 1.0 1.2 9.4 0.3 2.3 2 0 0 2 2 2 0 Thrombin inhibitor Madanin FtsH_ext PF06480.15 BAM41499.1 - 0.67 10.3 9.0 4.7 7.6 0.3 4.0 3 2 0 3 3 3 0 FtsH Extracellular FAINT PF04385.15 BAM41501.1 - 7.1e-08 32.4 17.3 0.00053 20.0 0.2 4.5 4 0 0 4 4 4 4 Domain of unknown function, DUF529 zf-RING_2 PF13639.6 BAM41502.1 - 2e-10 40.8 9.6 5.2e-10 39.5 9.6 1.8 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 BAM41502.1 - 1.1e-08 35.2 7.8 1.1e-08 35.2 7.8 1.9 2 0 0 2 2 1 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 BAM41502.1 - 4.7e-07 29.5 8.9 1e-06 28.4 8.9 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 BAM41502.1 - 1.8e-06 27.7 10.7 4.3e-06 26.5 10.7 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 BAM41502.1 - 1.5e-05 24.6 4.4 4e-05 23.3 4.4 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-ANAPC11 PF12861.7 BAM41502.1 - 3.9e-05 23.6 3.0 0.0001 22.3 3.0 1.7 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 BAM41502.1 - 6e-05 23.0 6.1 0.00014 21.8 6.1 1.7 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 BAM41502.1 - 0.00014 21.8 9.7 0.00028 20.8 9.7 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 BAM41502.1 - 0.00074 19.3 7.3 0.0016 18.3 7.3 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Zn_ribbon_17 PF17120.5 BAM41502.1 - 0.011 15.3 6.4 0.026 14.1 6.4 1.6 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type RRM_1 PF00076.22 BAM41502.1 - 0.025 14.4 0.0 0.063 13.1 0.0 1.7 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Prok-RING_4 PF14447.6 BAM41502.1 - 0.026 14.4 7.6 0.063 13.2 7.6 1.6 1 0 0 1 1 1 0 Prokaryotic RING finger family 4 FANCL_C PF11793.8 BAM41502.1 - 0.11 12.7 3.0 0.36 11.0 3.0 1.8 1 0 0 1 1 1 0 FANCL C-terminal domain zf-RING_4 PF14570.6 BAM41502.1 - 0.21 11.4 5.2 0.48 10.3 5.2 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-RING_10 PF16685.5 BAM41502.1 - 1.1 9.4 6.7 3.3 7.9 6.7 1.8 1 0 0 1 1 1 0 zinc RING finger of MSL2 zf-RING_9 PF13901.6 BAM41502.1 - 1.9 8.4 7.2 3.8 7.4 6.7 1.7 2 0 0 2 2 2 0 Putative zinc-RING and/or ribbon zf-RING-like PF08746.11 BAM41502.1 - 2.8 8.3 8.7 10 6.5 8.7 2.1 1 0 0 1 1 1 0 RING-like domain zf-C3HC4_4 PF15227.6 BAM41502.1 - 3.1 8.0 8.4 14 5.9 8.3 2.2 1 1 0 1 1 1 0 zinc finger of C3HC4-type, RING C1_1 PF00130.22 BAM41502.1 - 6 6.8 7.8 2.2 8.2 4.4 2.0 1 1 1 2 2 2 0 Phorbol esters/diacylglycerol binding domain (C1 domain) DUF2053 PF09767.9 BAM41503.1 - 8.6e-18 65.0 10.6 8.6e-18 65.0 10.6 1.5 2 0 0 2 2 2 1 Predicted membrane protein (DUF2053) DUF4383 PF14325.6 BAM41503.1 - 7.4 6.9 11.8 3.6 7.9 6.6 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4383) DJ-1_PfpI PF01965.24 BAM41504.1 - 9e-27 93.9 0.1 1.1e-26 93.5 0.1 1.1 1 0 0 1 1 1 1 DJ-1/PfpI family CRAL_TRIO_2 PF13716.6 BAM41507.1 - 6.6e-24 84.6 5.1 8.1e-24 84.4 4.0 1.7 2 0 0 2 2 2 1 Divergent CRAL/TRIO domain RhoGAP PF00620.27 BAM41507.1 - 1.4e-16 60.7 1.4 1.6e-16 60.5 0.1 1.7 2 0 0 2 2 2 1 RhoGAP domain Filamin PF00630.19 BAM41508.1 - 4e-08 34.0 0.2 5e-06 27.3 0.0 2.4 2 1 0 2 2 2 1 Filamin/ABP280 repeat DUF2856 PF11043.8 BAM41508.1 - 0.028 14.6 0.6 0.064 13.4 0.6 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2856) YojJ PF10372.9 BAM41508.1 - 0.096 12.8 0.9 0.24 11.5 0.3 2.0 2 0 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus Med11 PF10280.9 BAM41508.1 - 0.22 12.0 3.4 0.43 11.0 3.4 1.4 1 0 0 1 1 1 0 Mediator complex protein Spectrin PF00435.21 BAM41508.1 - 0.95 10.0 5.5 3.3 8.3 0.4 2.7 1 1 1 2 2 2 0 Spectrin repeat DASH_Dad3 PF08656.10 BAM41508.1 - 3.1 7.9 4.9 4.2 7.5 2.3 2.5 2 1 0 2 2 2 0 DASH complex subunit Dad3 AP2 PF00847.20 BAM41509.1 - 2.2e-10 40.6 1.5 5.6e-10 39.3 1.5 1.7 1 0 0 1 1 1 1 AP2 domain Flavodoxin_1 PF00258.25 BAM41510.1 - 2.5e-21 76.4 0.0 4.8e-21 75.5 0.0 1.5 1 0 0 1 1 1 1 Flavodoxin FAD_binding_1 PF00667.20 BAM41510.1 - 1.3e-12 47.8 0.3 2.5e-12 46.8 0.3 1.4 1 0 0 1 1 1 1 FAD binding domain NAD_binding_1 PF00175.21 BAM41510.1 - 9.2e-11 42.4 0.1 6.5e-10 39.6 0.0 2.5 3 0 0 3 3 3 1 Oxidoreductase NAD-binding domain Flavodoxin_5 PF12724.7 BAM41510.1 - 0.041 14.1 0.1 0.16 12.2 0.0 2.1 2 0 0 2 2 2 0 Flavodoxin domain CKS PF01111.19 BAM41512.1 - 5.6e-19 68.2 2.5 1.2e-18 67.1 2.5 1.6 1 0 0 1 1 1 1 Cyclin-dependent kinase regulatory subunit EAR PF07897.11 BAM41512.1 - 0.83 9.3 3.0 4.2 7.1 0.1 2.5 2 0 0 2 2 2 0 Ethylene-responsive binding factor-associated repression RRM_1 PF00076.22 BAM41513.1 - 4.8e-16 58.3 0.0 8.2e-16 57.6 0.0 1.4 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 BAM41513.1 - 0.17 11.8 0.0 0.3 11.0 0.0 1.4 1 1 0 1 1 1 0 Occluded RNA-recognition motif PAPS_reduct PF01507.19 BAM41514.1 - 7.8e-25 87.9 0.0 5.2e-15 55.9 0.0 2.3 1 1 1 2 2 2 2 Phosphoadenosine phosphosulfate reductase family Delta_lysin PF05372.11 BAM41514.1 - 0.056 12.7 0.1 0.15 11.4 0.1 1.7 1 0 0 1 1 1 0 Delta lysin family TRCF PF03461.15 BAM41514.1 - 0.21 12.0 1.2 0.46 10.9 1.2 1.6 1 0 0 1 1 1 0 TRCF domain DUF572 PF04502.13 BAM41515.1 - 4.5e-54 184.3 7.4 5.2e-54 184.1 7.4 1.0 1 0 0 1 1 1 1 Family of unknown function (DUF572) TarH PF02203.15 BAM41515.1 - 0.046 13.7 1.2 0.084 12.8 1.2 1.4 1 0 0 1 1 1 0 Tar ligand binding domain homologue Peptidase_M44 PF03410.13 BAM41515.1 - 0.056 12.0 0.0 0.07 11.7 0.0 1.1 1 0 0 1 1 1 0 Metallopeptidase from vaccinia pox TF_Zn_Ribbon PF08271.12 BAM41515.1 - 0.059 12.9 0.4 0.059 12.9 0.4 2.0 2 0 0 2 2 2 0 TFIIB zinc-binding zf-FCS PF06467.14 BAM41515.1 - 0.21 11.6 2.2 8.5 6.4 0.1 2.5 2 0 0 2 2 2 0 MYM-type Zinc finger with FCS sequence motif Rubredoxin_2 PF18073.1 BAM41515.1 - 0.5 10.1 4.6 0.3 10.8 0.5 2.2 2 0 0 2 2 2 0 Rubredoxin metal binding domain Ly49 PF08391.10 BAM41515.1 - 2 8.8 4.4 1.1 9.6 1.6 1.9 1 1 1 2 2 2 0 Ly49-like protein, N-terminal region GCS PF03074.16 BAM41516.1 - 4.9e-71 240.0 0.2 1.4e-37 130.0 0.1 2.6 2 0 0 2 2 2 2 Glutamate-cysteine ligase GCS PF03074.16 BAM41517.1 - 2.9e-94 316.4 0.2 6.1e-94 315.4 0.2 1.5 1 0 0 1 1 1 1 Glutamate-cysteine ligase G-patch_2 PF12656.7 BAM41518.1 - 1.7e-14 53.7 2.2 1.8e-14 53.6 0.1 2.2 2 0 0 2 2 2 1 G-patch domain NdhS PF11623.8 BAM41518.1 - 0.00096 18.8 0.0 0.0022 17.6 0.0 1.6 1 0 0 1 1 1 1 NAD(P)H dehydrogenase subunit S KN17_SH3 PF18131.1 BAM41518.1 - 0.023 14.8 3.9 0.023 14.8 3.9 2.4 2 0 0 2 2 2 0 KN17 SH3-like C-terminal domain IATP PF04568.12 BAM41518.1 - 0.26 11.7 4.3 0.15 12.5 1.2 2.2 2 0 0 2 2 2 0 Mitochondrial ATPase inhibitor, IATP DUF4614 PF15391.6 BAM41520.1 - 0.0079 16.2 1.3 0.016 15.2 1.3 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4614) Mucin PF01456.17 BAM41520.1 - 0.0081 16.2 7.0 0.016 15.2 7.0 1.4 1 0 0 1 1 1 1 Mucin-like glycoprotein Fumerase_C PF05683.12 BAM41521.1 - 2e-80 269.0 0.0 4.6e-80 267.8 0.0 1.7 1 0 0 1 1 1 1 Fumarase C-terminus Fumerase PF05681.14 BAM41521.1 - 1.2e-78 264.3 0.0 2.3e-78 263.4 0.0 1.5 1 0 0 1 1 1 1 Fumarate hydratase (Fumerase) DUF3449 PF11931.8 BAM41521.1 - 3.3e-73 245.4 1.5 3.3e-73 245.4 1.5 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF3449) SF3A3 PF16837.5 BAM41521.1 - 4.3e-20 72.0 6.9 4.3e-20 72.0 6.9 2.5 2 0 0 2 2 2 1 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 SF3a60_bindingd PF12108.8 BAM41521.1 - 0.014 15.2 0.0 0.058 13.3 0.0 2.1 1 0 0 1 1 1 0 Splicing factor SF3a60 binding domain zf-met PF12874.7 BAM41521.1 - 0.14 12.6 0.5 0.53 10.8 0.3 2.2 2 0 0 2 2 2 0 Zinc-finger of C2H2 type FAINT PF04385.15 BAM41522.1 - 1.8e-11 43.9 7.5 0.00079 19.4 0.0 3.4 3 0 0 3 3 3 3 Domain of unknown function, DUF529 FAINT PF04385.15 BAM41523.1 - 1.1e-15 57.5 20.6 5.7e-06 26.3 0.1 5.9 5 0 0 5 5 5 5 Domain of unknown function, DUF529 CHD5 PF04420.14 BAM41523.1 - 2.4 8.0 5.2 5.5 6.8 5.2 1.5 1 0 0 1 1 1 0 CHD5-like protein CS PF04969.16 BAM41524.1 - 3.9e-09 37.4 2.7 5.5e-09 36.9 1.8 1.6 2 0 0 2 2 2 1 CS domain CHCH PF06747.13 BAM41525.1 - 0.0012 18.9 9.7 0.0032 17.6 7.0 2.6 2 1 0 2 2 2 1 CHCH domain BDV_M PF16520.5 BAM41526.1 - 0.14 12.5 0.4 0.22 11.9 0.4 1.3 1 0 0 1 1 1 0 ssRNA-binding matrix protein of Bornaviridae 4HBT PF03061.22 BAM41529.1 - 3.6e-06 27.3 0.1 9.9e-06 25.8 0.1 1.7 2 0 0 2 2 2 1 Thioesterase superfamily 4HBT_3 PF13622.6 BAM41529.1 - 0.069 13.4 0.3 0.33 11.2 0.3 1.9 1 1 0 1 1 1 0 Thioesterase-like superfamily Multi-haem_cyto PF13447.6 BAM41530.1 - 0.11 11.8 0.4 2.3 7.4 0.0 2.2 2 0 0 2 2 2 0 Seven times multi-haem cytochrome CxxCH IMP2_N PF18590.1 BAM41531.1 - 6.5e-28 97.1 0.2 1.1e-27 96.4 0.2 1.4 1 0 0 1 1 1 1 Immune Mapped Protein 2 (IMP2) N-terminal domain NOT2_3_5 PF04153.18 BAM41532.1 - 1e-33 116.2 8.8 1.4e-33 115.8 8.8 1.1 1 0 0 1 1 1 1 NOT2 / NOT3 / NOT5 family Sas10_Utp3 PF04000.15 BAM41533.1 - 0.12 13.0 0.0 0.13 12.9 0.0 1.1 1 0 0 1 1 1 0 Sas10/Utp3/C1D family Alba PF01918.21 BAM41534.1 - 2.6e-08 33.6 0.3 3.3e-08 33.2 0.3 1.2 1 0 0 1 1 1 1 Alba Rpp20 PF12328.8 BAM41534.1 - 0.0014 18.6 0.0 0.0015 18.5 0.0 1.2 1 0 0 1 1 1 1 Rpp20 subunit of nuclear RNase MRP and P RAP PF08373.10 BAM41535.1 - 2e-08 34.2 0.1 5.1e-08 32.9 0.1 1.7 1 0 0 1 1 1 1 RAP domain tRNA-synt_1e PF01406.19 BAM41536.1 - 5.3e-121 403.6 1.2 7.9e-121 403.0 0.2 1.8 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 BAM41536.1 - 5.8e-11 41.8 3.7 0.0001 21.2 0.0 2.6 3 0 0 3 3 3 2 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 BAM41536.1 - 0.00099 17.5 0.0 0.0029 16.0 0.0 1.8 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1f PF01921.18 BAM41536.1 - 0.035 13.0 0.4 0.073 12.0 0.1 1.6 2 0 0 2 2 2 0 tRNA synthetases class I (K) tRNA-synt_1c PF00749.21 BAM41536.1 - 0.037 12.9 1.0 0.12 11.2 0.0 2.2 2 0 0 2 2 2 0 tRNA synthetases class I (E and Q), catalytic domain DALR_2 PF09190.11 BAM41536.1 - 0.077 13.5 0.0 0.28 11.7 0.0 2.0 1 0 0 1 1 1 0 DALR domain DUF2524 PF10732.9 BAM41536.1 - 0.36 11.2 2.7 1.5 9.1 2.7 2.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2524) Myosin_N PF02736.19 BAM41538.1 - 0.052 13.4 0.1 0.052 13.4 0.1 2.7 3 0 0 3 3 3 0 Myosin N-terminal SH3-like domain Sugar_tr PF00083.24 BAM41539.1 - 6.9e-68 229.6 29.1 8.9e-68 229.2 29.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 BAM41539.1 - 7.7e-20 71.1 27.4 7.7e-20 71.1 27.4 1.8 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 BAM41540.1 - 2.7e-71 240.8 28.2 2.7e-70 237.5 28.5 1.9 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 BAM41540.1 - 2.4e-20 72.8 25.1 2.4e-20 72.8 25.1 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily RRM_5 PF13893.6 BAM41540.1 - 0.059 13.0 0.1 14 5.3 0.0 2.5 2 0 0 2 2 2 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF4079 PF13301.6 BAM41540.1 - 0.57 10.3 7.8 8.2 6.6 2.3 3.5 2 2 0 2 2 2 0 Protein of unknown function (DUF4079) RIBIOP_C PF04950.12 BAM41541.1 - 1.3e-74 251.3 0.0 1.3e-74 251.3 0.0 2.3 2 0 0 2 2 2 1 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal AARP2CN PF08142.12 BAM41541.1 - 7.7e-21 74.0 0.0 4e-20 71.7 0.0 2.4 1 0 0 1 1 1 1 AARP2CN (NUC121) domain GTP_EFTU PF00009.27 BAM41541.1 - 1.6e-05 24.5 1.3 0.00033 20.2 0.1 3.3 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain AAA_14 PF13173.6 BAM41541.1 - 0.002 18.2 0.1 0.011 15.8 0.1 2.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAM41541.1 - 0.012 16.1 0.0 0.043 14.2 0.0 1.9 1 0 0 1 1 1 0 AAA ATPase domain MMR_HSR1 PF01926.23 BAM41541.1 - 0.013 15.6 0.4 0.075 13.1 0.4 2.4 1 1 0 1 1 1 0 50S ribosome-binding GTPase RNA_helicase PF00910.22 BAM41541.1 - 0.03 14.7 0.0 0.26 11.7 0.0 2.6 2 0 0 2 2 2 0 RNA helicase Gluconate_2-dh3 PF13618.6 BAM41541.1 - 0.04 14.1 0.9 0.68 10.2 0.4 2.6 2 0 0 2 2 2 0 Gluconate 2-dehydrogenase subunit 3 PduV-EutP PF10662.9 BAM41541.1 - 0.07 12.9 0.1 0.2 11.4 0.1 1.8 1 1 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation RteC PF09357.10 BAM41542.1 - 0.0018 18.0 0.6 0.0022 17.7 0.6 1.1 1 0 0 1 1 1 1 RteC protein DUF3268 PF11672.8 BAM41542.1 - 0.079 13.3 0.1 0.094 13.0 0.1 1.1 1 0 0 1 1 1 0 zinc-finger-containing domain zf-CW PF07496.15 BAM41543.1 - 1.2e-16 60.5 6.5 2.5e-16 59.4 6.5 1.6 1 0 0 1 1 1 1 CW-type Zinc Finger EF-hand_1 PF00036.32 BAM41544.1 - 3e-24 82.7 7.5 6.2e-08 31.7 0.2 4.4 4 1 0 4 4 4 3 EF hand EF-hand_7 PF13499.6 BAM41544.1 - 1.6e-22 79.7 1.5 3.9e-14 52.8 0.1 2.2 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_8 PF13833.6 BAM41544.1 - 4e-21 74.6 5.9 1.2e-08 34.6 0.4 3.2 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 BAM41544.1 - 2.8e-19 67.3 2.3 1.9e-06 27.3 0.0 4.4 4 1 0 4 4 4 3 EF-hand domain EF-hand_5 PF13202.6 BAM41544.1 - 7.3e-15 53.7 2.3 0.00078 18.8 0.1 3.8 3 0 0 3 3 3 3 EF hand EF-hand_9 PF14658.6 BAM41544.1 - 1.5e-10 41.2 0.0 2.6e-06 27.7 0.0 2.1 2 0 0 2 2 2 2 EF-hand domain Dockerin_1 PF00404.18 BAM41544.1 - 0.00058 20.0 0.7 1.1 9.5 0.0 2.7 2 1 1 3 3 3 2 Dockerin type I domain EF-hand_4 PF12763.7 BAM41544.1 - 0.0042 17.0 0.8 6.6 6.7 0.0 2.9 1 1 2 3 3 3 3 Cytoskeletal-regulatory complex EF hand EF-hand_11 PF08976.11 BAM41544.1 - 0.0045 17.9 0.0 2.1 9.3 0.0 2.1 1 1 1 2 2 2 2 EF-hand domain SPARC_Ca_bdg PF10591.9 BAM41544.1 - 0.0045 17.3 0.0 0.62 10.4 0.0 2.2 2 0 0 2 2 2 1 Secreted protein acidic and rich in cysteine Ca binding region UPF0154 PF03672.13 BAM41544.1 - 0.014 15.4 0.0 0.29 11.2 0.0 2.4 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0154) Gp-FAR-1 PF05823.12 BAM41544.1 - 0.066 13.6 0.6 4.8 7.5 0.1 2.6 3 0 0 3 3 3 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) SurA_N_3 PF13624.6 BAM41544.1 - 0.085 12.6 0.2 1.4 8.7 0.0 2.0 1 1 1 2 2 2 0 SurA N-terminal domain FlgD PF03963.14 BAM41544.1 - 0.1 12.9 0.0 0.18 12.1 0.0 1.6 1 1 0 1 1 1 0 Flagellar hook capping protein - N-terminal region IspD PF01128.19 BAM41545.1 - 1.1e-33 116.8 0.0 7.1e-31 107.7 0.0 2.2 2 0 0 2 2 2 2 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase NTP_transf_3 PF12804.7 BAM41545.1 - 0.26 11.6 0.0 0.41 11.0 0.0 1.5 1 1 0 1 1 1 0 MobA-like NTP transferase domain Asp PF00026.23 BAM41546.1 - 4.3e-70 236.6 0.0 6.3e-70 236.1 0.0 1.2 1 0 0 1 1 1 1 Eukaryotic aspartyl protease TAXi_N PF14543.6 BAM41546.1 - 5.4e-11 43.0 2.5 1.2e-09 38.7 0.0 3.2 3 1 1 4 4 4 1 Xylanase inhibitor N-terminal TAXi_C PF14541.6 BAM41546.1 - 0.00026 20.8 0.0 0.0012 18.6 0.0 2.1 2 0 0 2 2 2 1 Xylanase inhibitor C-terminal XRCC1_N PF01834.16 BAM41546.1 - 0.018 15.1 0.0 0.042 13.8 0.0 1.6 1 0 0 1 1 1 0 XRCC1 N terminal domain AFP_2 PF18815.1 BAM41546.1 - 0.14 12.4 1.1 0.48 10.7 0.3 2.1 2 0 0 2 2 2 0 Bacterial antifreeze protein repeat Mt_ATP-synt_D PF05873.12 BAM41547.1 - 0.012 15.5 1.3 0.012 15.5 1.3 2.5 3 1 1 4 4 4 0 ATP synthase D chain, mitochondrial (ATP5H) PET10 PF17316.2 BAM41548.1 - 0.0016 18.0 1.7 0.0016 18.0 1.7 2.6 2 1 1 3 3 3 1 Petite colonies protein 10 NIF PF03031.18 BAM41548.1 - 0.013 15.3 2.2 0.022 14.5 2.2 1.4 1 0 0 1 1 1 0 NLI interacting factor-like phosphatase TFIIE_beta PF02186.15 BAM41548.1 - 0.031 14.6 1.5 0.61 10.4 0.0 3.1 3 0 0 3 3 3 0 TFIIE beta subunit core domain DUF4943 PF16301.5 BAM41548.1 - 0.04 13.9 0.5 0.73 9.8 0.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4943) Speriolin_C PF15059.6 BAM41548.1 - 0.079 13.1 0.1 0.079 13.1 0.1 2.8 2 1 0 2 2 2 0 Speriolin C-terminus TAFH PF07531.14 BAM41548.1 - 0.26 11.4 2.4 1.8 8.7 0.0 3.0 4 0 0 4 4 4 0 NHR1 homology to TAF Thioredoxin_10 PF17991.1 BAM41548.1 - 0.3 11.6 2.2 5.1 7.7 0.1 2.7 3 0 0 3 3 3 0 Thioredoxin like C-terminal domain DUF1059 PF06348.11 BAM41548.1 - 1.2 9.4 0.0 1.2 9.4 0.0 3.3 4 1 0 4 4 4 0 Protein of unknown function (DUF1059) Mitovir_RNA_pol PF05919.11 BAM41548.1 - 1.3 8.1 9.6 0.42 9.7 7.3 1.3 2 0 0 2 2 2 0 Mitovirus RNA-dependent RNA polymerase dsDNA_bind PF01984.20 BAM41549.1 - 6.1e-18 65.1 9.4 6.8e-18 65.0 9.4 1.0 1 0 0 1 1 1 1 Double-stranded DNA-binding domain DUF4332 PF14229.6 BAM41549.1 - 6.6e-05 23.1 1.2 0.0001 22.6 1.2 1.2 1 1 0 1 1 1 1 Domain of unknown function (DUF4332) YolD PF08863.10 BAM41549.1 - 0.21 11.7 5.6 0.44 10.6 1.3 2.2 2 0 0 2 2 2 0 YolD-like protein Ribosomal_S27e PF01667.17 BAM41550.1 - 7.7e-24 83.2 5.4 9.4e-24 82.9 5.4 1.1 1 0 0 1 1 1 1 Ribosomal protein S27 TF_Zn_Ribbon PF08271.12 BAM41550.1 - 0.0097 15.4 0.4 0.015 14.8 0.4 1.3 1 0 0 1 1 1 1 TFIIB zinc-binding DUF3450 PF11932.8 BAM41551.1 - 0.0044 16.4 1.8 0.0069 15.7 1.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3450) Herpes_UL6 PF01763.16 BAM41551.1 - 0.0061 15.1 4.5 0.0061 15.1 4.5 1.5 1 1 1 2 2 2 1 Herpesvirus UL6 like YabA PF06156.13 BAM41551.1 - 0.019 15.6 3.0 0.019 15.6 3.0 2.3 1 1 1 2 2 2 0 Initiation control protein YabA Wbp11 PF09429.10 BAM41551.1 - 0.034 14.6 2.6 0.082 13.3 2.6 1.6 1 0 0 1 1 1 0 WW domain binding protein 11 Spc24 PF08286.11 BAM41551.1 - 0.034 14.4 1.5 0.034 14.4 1.5 2.2 2 1 0 2 2 2 0 Spc24 subunit of Ndc80 CENP-H PF05837.12 BAM41551.1 - 0.038 14.4 3.3 0.038 14.4 3.3 2.0 1 1 0 2 2 2 0 Centromere protein H (CENP-H) Prefoldin PF02996.17 BAM41551.1 - 0.075 12.9 4.0 0.17 11.8 4.0 1.6 1 1 0 1 1 1 0 Prefoldin subunit TSC22 PF01166.18 BAM41551.1 - 0.14 12.5 5.3 0.15 12.4 1.3 2.7 3 0 0 3 3 3 0 TSC-22/dip/bun family DivIC PF04977.15 BAM41551.1 - 0.16 11.8 4.5 0.11 12.3 2.6 1.7 2 0 0 2 2 2 0 Septum formation initiator GPS2_interact PF15784.5 BAM41551.1 - 1.2 9.6 6.5 1.4 9.4 3.3 2.2 2 0 0 2 2 2 0 G-protein pathway suppressor 2-interacting domain DUF4988 PF16378.5 BAM41551.1 - 3.6 7.2 8.4 0.27 10.9 2.5 1.9 1 1 1 2 2 2 0 Domain of unknown function Ribosomal_L24e PF01246.20 BAM41554.1 - 5.5e-24 84.2 1.7 5.5e-24 84.2 1.7 1.8 2 0 0 2 2 2 1 Ribosomal protein L24e SPAM PF02090.15 BAM41554.1 - 0.27 11.0 5.0 0.36 10.6 5.0 1.2 1 0 0 1 1 1 0 Salmonella surface presentation of antigen gene type M protein DCP2 PF05026.13 BAM41555.1 - 2.8e-21 75.6 1.0 2.8e-21 75.6 1.0 2.3 2 0 0 2 2 2 1 Dcp2, box A domain NUDIX PF00293.28 BAM41555.1 - 7.7e-13 48.6 0.0 1.4e-12 47.8 0.0 1.4 1 0 0 1 1 1 1 NUDIX domain CPSase_L_D2 PF02786.17 BAM41556.1 - 1e-90 302.9 0.0 1.6e-67 227.1 0.0 2.3 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_sm_chain PF00988.22 BAM41556.1 - 1.3e-35 122.0 0.0 2.9e-35 120.9 0.0 1.6 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain CPSase_L_D3 PF02787.19 BAM41556.1 - 9.8e-31 106.6 0.0 2.5e-30 105.3 0.0 1.7 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GATase PF00117.28 BAM41556.1 - 1.3e-26 93.5 0.0 4e-26 92.0 0.0 1.8 2 0 0 2 2 2 1 Glutamine amidotransferase class-I ATPgrasp_Ter PF15632.6 BAM41556.1 - 3.1e-13 49.6 0.2 1.6e-07 31.2 0.0 2.5 2 0 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp PF02222.22 BAM41556.1 - 1.5e-08 34.4 0.0 2.6e-06 27.1 0.0 2.4 2 0 0 2 2 2 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 BAM41556.1 - 2.1e-07 30.7 0.1 0.00034 20.2 0.0 3.2 2 1 0 2 2 2 2 D-ala D-ala ligase C-terminus MGS PF02142.22 BAM41556.1 - 4.3e-05 23.6 0.0 0.00028 21.0 0.0 2.4 1 1 0 1 1 1 1 MGS-like domain DJ-1_PfpI PF01965.24 BAM41556.1 - 6.8e-05 22.7 0.0 0.0047 16.7 0.0 2.9 2 0 0 2 2 2 1 DJ-1/PfpI family Peptidase_C26 PF07722.13 BAM41556.1 - 0.076 12.7 0.0 0.29 10.8 0.0 1.9 2 0 0 2 2 2 0 Peptidase C26 Pkinase PF00069.25 BAM41559.1 - 5.7e-56 189.8 0.0 8.4e-56 189.2 0.0 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM41559.1 - 1.1e-21 77.3 0.0 2.9e-21 75.9 0.0 1.7 1 1 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 BAM41559.1 - 0.008 15.6 0.0 0.013 14.9 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 BAM41559.1 - 0.015 15.3 0.3 0.027 14.4 0.3 1.5 1 1 0 1 1 1 0 Phosphotransferase enzyme family Choline_kinase PF01633.20 BAM41559.1 - 0.035 13.7 0.0 0.073 12.6 0.0 1.5 1 0 0 1 1 1 0 Choline/ethanolamine kinase CSN8_PSD8_EIF3K PF10075.9 BAM41560.1 - 5.2e-13 49.2 1.7 3.3e-06 27.1 0.0 3.0 3 1 1 4 4 4 2 CSN8/PSMD8/EIF3K family SAC3_GANP PF03399.16 BAM41560.1 - 8.9e-06 25.3 0.7 8.9e-06 25.3 0.7 1.9 2 1 0 2 2 2 1 SAC3/GANP family DUF2232 PF09991.9 BAM41560.1 - 0.21 10.7 0.1 0.28 10.3 0.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2232) SPC25 PF06703.11 BAM41562.1 - 0.13 12.0 3.9 0.061 13.1 1.2 1.8 2 0 0 2 2 2 0 Microsomal signal peptidase 25 kDa subunit (SPC25) F1F0-ATPsyn_F PF10791.9 BAM41562.1 - 0.81 10.2 3.5 1.7 9.2 0.1 3.2 3 1 0 3 3 3 0 Mitochondrial F1-F0 ATP synthase subunit F of fungi WD40 PF00400.32 BAM41563.1 - 4.9e-08 33.5 0.1 0.0028 18.4 0.0 4.0 4 0 0 4 4 4 2 WD domain, G-beta repeat TFIIIC_delta PF12657.7 BAM41563.1 - 0.017 15.0 0.4 0.93 9.4 0.0 2.6 2 1 0 2 2 2 0 Transcription factor IIIC subunit delta N-term Frtz PF11768.8 BAM41563.1 - 0.11 10.8 0.1 0.85 7.9 0.0 2.0 1 1 1 2 2 2 0 WD repeat-containing and planar cell polarity effector protein Fritz PaRep2b PF07775.11 BAM41564.1 - 0.0051 15.4 0.7 0.64 8.4 0.1 2.4 2 0 0 2 2 2 2 PaRep2b protein FliS PF02561.14 BAM41565.1 - 0.11 12.8 3.4 0.37 11.1 0.1 2.7 3 0 0 3 3 3 0 Flagellar protein FliS FAINT PF04385.15 BAM41568.1 - 1.5e-11 44.2 13.4 3.1e-07 30.3 5.4 2.3 2 0 0 2 2 2 2 Domain of unknown function, DUF529 MRP-63 PF14978.6 BAM41568.1 - 0.036 14.7 1.5 0.057 14.0 1.5 1.3 1 0 0 1 1 1 0 Mitochondrial ribosome protein 63 Phage_T4_gp19 PF06841.12 BAM41568.1 - 0.066 13.1 1.8 0.11 12.4 1.8 1.3 1 0 0 1 1 1 0 T4-like virus tail tube protein gp19 LytB_WW PF18342.1 BAM41570.1 - 0.039 14.1 0.1 0.065 13.4 0.1 1.5 1 1 0 1 1 1 0 Endo-beta-N-acetylglucosaminidase LytB WW domain KH_6 PF15985.5 BAM41571.1 - 7.9e-07 29.3 0.0 2e-06 28.1 0.0 1.7 1 0 0 1 1 1 1 KH domain CRT10 PF08728.10 BAM41571.1 - 0.13 10.4 4.3 0.23 9.6 4.3 1.3 1 0 0 1 1 1 0 CRT10 pXO2-72 PF17443.2 BAM41571.1 - 2.6 8.4 5.6 21 5.5 0.5 2.9 1 1 1 2 2 2 0 Uncharacterized protein pXO2-72 RRM_1 PF00076.22 BAM41574.1 - 3.1e-15 55.7 0.0 3.1e-08 33.3 0.0 2.4 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_occluded PF16842.5 BAM41574.1 - 0.00037 20.3 0.0 0.0051 16.6 0.0 2.5 2 1 1 3 3 3 1 Occluded RNA-recognition motif RED_N PF07808.13 BAM41575.1 - 9e-14 51.6 10.1 9e-14 51.6 10.1 3.1 1 1 0 2 2 2 1 RED-like protein N-terminal region V-ATPase_H_C PF11698.8 BAM41576.1 - 6.8e-39 132.6 2.0 6.8e-39 132.6 2.0 2.7 3 0 0 3 3 3 1 V-ATPase subunit H V-ATPase_H_N PF03224.14 BAM41576.1 - 6.5e-33 114.4 14.3 1.2e-32 113.5 11.1 2.6 2 1 0 2 2 2 1 V-ATPase subunit H Myosin_N PF02736.19 BAM41577.1 - 0.024 14.5 0.8 0.065 13.1 0.1 2.2 2 0 0 2 2 2 0 Myosin N-terminal SH3-like domain FAINT PF04385.15 BAM41578.1 - 1.7e-12 47.2 20.5 5.5e-05 23.2 4.5 3.6 3 0 0 3 3 3 3 Domain of unknown function, DUF529 RuvB_C PF05491.13 BAM41578.1 - 3.8e-06 26.7 0.0 2.5e+02 1.6 0.0 7.8 8 0 0 8 8 8 0 RuvB C-terminal winged helix domain NtCtMGAM_N PF16863.5 BAM41578.1 - 0.023 14.9 6.3 0.044 14.0 0.3 3.5 3 0 0 3 3 3 0 N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase FAINT PF04385.15 BAM41579.1 - 1.1e-15 57.4 18.9 8e-08 32.2 1.7 2.4 2 0 0 2 2 2 2 Domain of unknown function, DUF529 SH3_10 PF17902.1 BAM41579.1 - 0.12 12.4 0.7 1.6 8.9 0.1 2.4 2 0 0 2 2 2 0 SH3 domain DUF4537 PF15057.6 BAM41579.1 - 0.15 12.0 0.2 0.36 10.8 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4537) DMP12 PF16779.5 BAM41581.1 - 0.13 12.2 0.2 0.13 12.2 0.2 1.9 2 0 0 2 2 2 0 DNA-mimic protein ABC_membrane_2 PF06472.15 BAM41582.1 - 0.2 11.0 0.8 0.22 10.9 0.1 1.5 2 0 0 2 2 2 0 ABC transporter transmembrane region 2 AP2 PF00847.20 BAM41583.1 - 2e-05 24.7 5.7 0.00025 21.2 0.1 3.2 3 0 0 3 3 3 2 AP2 domain Retinal PF15449.6 BAM41583.1 - 0.26 9.0 0.1 0.35 8.6 0.1 1.0 1 0 0 1 1 1 0 Retinal protein FAINT PF04385.15 BAM41584.1 - 1.9e-43 146.4 127.3 2.4e-07 30.7 0.2 17.4 17 0 0 17 17 17 16 Domain of unknown function, DUF529 cEGF PF12662.7 BAM41584.1 - 0.012 15.5 1.0 74 3.4 0.0 5.8 7 0 0 7 7 7 0 Complement Clr-like EGF-like Ribosomal_S9 PF00380.19 BAM41584.1 - 0.021 15.4 0.1 1.6e+02 2.8 0.0 4.9 5 0 0 5 5 5 0 Ribosomal protein S9/S16 TFIIS_M PF07500.14 BAM41584.1 - 0.62 10.6 2.5 51 4.4 0.0 3.9 4 0 0 4 4 4 0 Transcription factor S-II (TFIIS), central domain PKS_DE PF18369.1 BAM41585.1 - 0.046 14.3 0.6 0.056 14.0 0.6 1.2 1 0 0 1 1 1 0 Polyketide synthase dimerisation element domain PhoPQ_related PF10142.9 BAM41585.1 - 0.2 10.3 0.0 0.2 10.3 0.0 1.0 1 0 0 1 1 1 0 PhoPQ-activated pathogenicity-related protein Mcl1_mid PF12341.8 BAM41587.1 - 3.9e-18 65.8 1.1 9.1e-18 64.6 0.2 1.9 2 0 0 2 2 2 1 Minichromosome loss protein, Mcl1, middle region RNA_pol_L_2 PF13656.6 BAM41588.1 - 7.2e-21 73.8 0.0 8.9e-21 73.5 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Viral_NABP PF05515.11 BAM41588.1 - 0.017 15.0 0.0 0.02 14.7 0.0 1.0 1 0 0 1 1 1 0 Viral nucleic acid binding NIF PF03031.18 BAM41589.1 - 8.2e-54 181.6 0.7 1.3e-53 181.0 0.7 1.3 1 0 0 1 1 1 1 NLI interacting factor-like phosphatase UQ_con PF00179.26 BAM41590.1 - 5.5e-17 61.7 0.0 2.3e-16 59.7 0.0 2.1 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme DnaJ PF00226.31 BAM41590.1 - 2.4e-14 53.2 4.2 2.4e-14 53.2 4.2 2.7 3 0 0 3 3 3 1 DnaJ domain DUF4217 PF13959.6 BAM41590.1 - 0.19 12.0 0.2 4.6 7.5 0.1 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF4217) Zip PF02535.22 BAM41590.1 - 1.9 7.6 5.2 2.5 7.3 5.2 1.2 1 0 0 1 1 1 0 ZIP Zinc transporter DUF4564 PF15169.6 BAM41591.1 - 0.071 12.8 0.0 5.8 6.6 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4564) Flo11 PF10182.9 BAM41593.1 - 0.027 14.6 0.7 0.055 13.6 0.7 1.4 1 0 0 1 1 1 0 Flo11 domain Ribosomal_L19e PF01280.20 BAM41593.1 - 0.05 13.7 0.9 0.098 12.7 0.9 1.6 1 1 0 1 1 1 0 Ribosomal protein L19e WBS_methylT PF12589.8 BAM41594.1 - 3e-11 43.9 3.0 4.9e-11 43.2 3.0 1.4 1 0 0 1 1 1 1 Methyltransferase involved in Williams-Beuren syndrome Methyltransf_11 PF08241.12 BAM41594.1 - 2.9e-07 31.0 0.0 5.1e-07 30.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 BAM41594.1 - 1.4e-06 28.9 0.0 2.8e-06 27.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAM41594.1 - 0.0002 21.2 0.1 0.00038 20.3 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 BAM41594.1 - 0.00063 20.4 0.0 0.0014 19.3 0.0 1.7 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 BAM41594.1 - 0.0014 18.4 0.0 0.0019 18.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain N6_N4_Mtase PF01555.18 BAM41594.1 - 0.0022 17.7 0.2 0.51 10.0 0.0 2.2 2 0 0 2 2 2 2 DNA methylase CMAS PF02353.20 BAM41594.1 - 0.011 15.1 0.0 0.018 14.4 0.0 1.3 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase PCMT PF01135.19 BAM41594.1 - 0.11 12.3 0.0 0.18 11.6 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Exo_endo_phos PF03372.23 BAM41595.1 - 0.081 12.4 0.0 0.16 11.5 0.0 1.6 1 1 0 1 1 1 0 Endonuclease/Exonuclease/phosphatase family U3_assoc_6 PF08640.11 BAM41596.1 - 9.2e-17 60.9 3.1 9.2e-17 60.9 3.1 2.5 2 0 0 2 2 2 1 U3 small nucleolar RNA-associated protein 6 DUF5377 PF17347.2 BAM41596.1 - 0.086 13.2 0.5 0.52 10.7 0.2 2.6 2 0 0 2 2 2 0 Family of unknown function (DUF5377) EcsC PF12787.7 BAM41596.1 - 0.22 11.2 3.8 0.13 11.9 0.1 2.3 3 0 0 3 3 3 0 EcsC protein family DUF4709 PF15821.5 BAM41596.1 - 0.56 10.5 6.8 3.9 7.8 1.2 3.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4709) CDC45 PF02724.14 BAM41597.1 - 7.9 4.6 9.1 10 4.3 9.1 1.2 1 0 0 1 1 1 0 CDC45-like protein DNA_RNApol_7kD PF03604.13 BAM41599.1 - 6.2e-16 57.8 3.6 1.4e-15 56.6 3.6 1.7 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit PUB PF09409.10 BAM41599.1 - 1.8e-07 31.0 3.2 4.4e-07 29.7 2.6 2.0 1 1 1 2 2 2 1 PUB domain HypA PF01155.19 BAM41599.1 - 0.016 15.2 0.3 0.046 13.7 0.3 1.7 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DZR PF12773.7 BAM41599.1 - 0.03 14.4 0.4 0.052 13.6 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon DUF2203 PF09969.9 BAM41599.1 - 0.033 14.9 1.9 0.34 11.7 0.4 2.8 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2203) Zn-ribbon_8 PF09723.10 BAM41599.1 - 0.1 12.7 0.3 0.26 11.4 0.3 1.7 1 0 0 1 1 1 0 Zinc ribbon domain DUF1451 PF07295.11 BAM41599.1 - 0.13 12.3 1.6 0.2 11.7 0.2 2.0 2 0 0 2 2 2 0 Zinc-ribbon containing domain zinc-ribbon_6 PF10005.9 BAM41599.1 - 0.13 13.0 0.2 0.28 11.9 0.2 1.6 1 0 0 1 1 1 0 zinc-ribbon domain SLATT_6 PF18169.1 BAM41599.1 - 0.17 11.5 7.7 0.26 10.9 1.4 2.7 4 0 0 4 4 4 0 SMODS and SLOG-associating 2TM effector domain 6 Zn_ribbon_SprT PF17283.2 BAM41599.1 - 0.48 10.4 2.3 1.8 8.5 2.3 2.0 1 1 0 1 1 1 0 SprT-like zinc ribbon domain Syntaxin_2 PF14523.6 BAM41599.1 - 1.3 9.4 8.4 3.3 8.1 2.1 3.0 3 1 0 3 3 2 0 Syntaxin-like protein P4Ha_N PF08336.11 BAM41599.1 - 6.7 6.7 8.7 0.96 9.5 1.8 2.7 3 0 0 3 3 3 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region DALR_1 PF05746.15 BAM41600.1 - 0.047 13.9 0.2 0.16 12.2 0.2 2.0 1 0 0 1 1 1 0 DALR anticodon binding domain Chromo PF00385.24 BAM41601.1 - 1.1e-19 70.0 4.1 1e-14 54.1 0.2 2.8 2 0 0 2 2 2 2 Chromo (CHRromatin Organisation MOdifier) domain Chromo_shadow PF01393.19 BAM41601.1 - 5.3e-05 23.2 1.1 0.027 14.6 0.0 3.4 3 0 0 3 3 3 2 Chromo shadow domain CRT10 PF08728.10 BAM41601.1 - 0.054 11.7 4.3 0.07 11.3 4.3 1.1 1 0 0 1 1 1 0 CRT10 AFG1_ATPase PF03969.16 BAM41602.1 - 1.8e-80 270.6 2.8 7.2e-78 262.0 0.2 2.2 2 0 0 2 2 2 2 AFG1-like ATPase AAA PF00004.29 BAM41602.1 - 0.00038 20.9 2.3 0.016 15.7 0.0 3.6 3 1 1 4 4 4 1 ATPase family associated with various cellular activities (AAA) Ribosomal_S10 PF00338.22 BAM41602.1 - 0.00074 19.7 3.6 0.0025 18.0 0.7 2.9 3 0 0 3 3 3 1 Ribosomal protein S10p/S20e Snapin_Pallidin PF14712.6 BAM41602.1 - 0.052 14.0 0.2 0.052 14.0 0.2 3.4 6 0 0 6 6 6 0 Snapin/Pallidin AAA_22 PF13401.6 BAM41602.1 - 0.11 12.7 5.6 0.21 11.9 0.2 3.8 4 1 0 4 4 4 0 AAA domain RNA_helicase PF00910.22 BAM41602.1 - 0.26 11.7 2.6 0.71 10.3 0.0 3.2 4 0 0 4 4 4 0 RNA helicase ABC_tran PF00005.27 BAM41602.1 - 0.26 11.8 3.3 0.3 11.6 0.0 2.8 2 1 0 2 2 2 0 ABC transporter FANCI_S2 PF14676.6 BAM41602.1 - 0.4 11.0 4.5 1.2 9.5 0.7 2.9 3 0 0 3 3 3 0 FANCI solenoid 2 DUF1493 PF07377.12 BAM41602.1 - 1.7 9.2 6.0 0.49 10.9 0.2 3.1 4 0 0 4 4 4 0 Protein of unknown function (DUF1493) Ribosomal_L17 PF01196.19 BAM41603.1 - 7.6e-22 78.0 0.5 1e-21 77.6 0.5 1.2 1 0 0 1 1 1 1 Ribosomal protein L17 DUF1132 PF06575.12 BAM41603.1 - 0.02 15.3 1.4 0.099 13.0 0.5 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF1132) Ribosomal_L27A PF00828.19 BAM41604.1 - 2.2e-24 86.6 0.5 6.3e-24 85.1 0.1 2.0 2 0 0 2 2 2 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FAINT PF04385.15 BAM41605.1 - 2.5e-06 27.5 2.2 3.8e-06 26.9 2.2 1.3 1 0 0 1 1 1 1 Domain of unknown function, DUF529 FAINT PF04385.15 BAM41606.1 - 5e-26 90.6 36.7 1e-05 25.5 3.0 8.2 8 0 0 8 8 8 5 Domain of unknown function, DUF529 RasGEF_N_2 PF14663.6 BAM41606.1 - 0.051 14.0 0.0 0.22 11.9 0.0 2.0 2 0 0 2 2 2 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain FAINT PF04385.15 BAM41607.1 - 8.2e-09 35.4 27.2 0.26 11.4 0.4 7.0 6 0 0 6 6 6 6 Domain of unknown function, DUF529 KA1 PF02149.19 BAM41607.1 - 0.12 12.2 12.5 6.9 6.6 0.2 4.0 4 0 0 4 4 4 0 Kinase associated domain 1 FAINT PF04385.15 BAM41608.1 - 0.00022 21.2 0.9 0.00022 21.2 0.9 3.0 3 1 0 3 3 3 1 Domain of unknown function, DUF529 FAINT PF04385.15 BAM41609.1 - 8.8e-07 28.9 1.0 1.8e-06 27.9 1.0 1.5 1 0 0 1 1 1 1 Domain of unknown function, DUF529 FAINT PF04385.15 BAM41610.1 - 5.5e-21 74.4 26.1 2.7e-05 24.1 0.4 5.1 5 0 0 5 5 5 4 Domain of unknown function, DUF529 Tcp10_C PF07202.13 BAM41610.1 - 0.061 13.3 0.7 0.55 10.2 0.0 2.6 2 1 0 2 2 2 0 T-complex protein 10 C-terminus Insulin_TMD PF17870.1 BAM41610.1 - 0.15 12.1 1.5 0.48 10.5 1.5 1.8 1 0 0 1 1 1 0 Insulin receptor trans-membrane segment DUF3908 PF13048.6 BAM41610.1 - 0.69 10.2 7.7 7.5 6.8 0.4 3.4 3 0 0 3 3 3 0 Protein of unknown function (DUF3908) FAINT PF04385.15 BAM41611.1 - 1.4e-06 28.3 16.2 0.00053 20.0 5.3 3.1 3 0 0 3 3 3 2 Domain of unknown function, DUF529 ETRAMP PF09716.10 BAM41612.1 - 0.01 15.9 0.8 0.047 13.8 0.8 1.9 1 1 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) BioY PF02632.14 BAM41612.1 - 0.057 13.5 0.0 0.094 12.8 0.0 1.3 1 0 0 1 1 1 0 BioY family LRR19-TM PF15176.6 BAM41612.1 - 0.066 13.2 3.2 0.18 11.8 0.1 2.1 2 0 0 2 2 2 0 Leucine-rich repeat family 19 TM domain CaM_bdg_C0 PF10562.9 BAM41612.1 - 0.069 13.2 1.6 0.15 12.2 1.6 1.5 1 0 0 1 1 1 0 Calmodulin-binding domain C0 of NMDA receptor NR1 subunit FAINT PF04385.15 BAM41614.1 - 6.7e-13 48.5 12.0 9.8e-08 32.0 0.3 2.5 2 0 0 2 2 2 2 Domain of unknown function, DUF529 Archease PF01951.16 BAM41615.1 - 4.8e-33 114.3 0.0 1.2e-32 113.1 0.0 1.6 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) FAINT PF04385.15 BAM41616.1 - 0.00047 20.1 15.9 0.014 15.4 4.1 2.9 3 0 0 3 3 3 2 Domain of unknown function, DUF529 Torsin PF06309.11 BAM41617.1 - 0.036 14.2 0.6 0.17 12.0 0.0 2.4 3 0 0 3 3 3 0 Torsin DUF2971 PF11185.8 BAM41617.1 - 4.5 8.5 7.5 1.9 9.7 0.3 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF2971) FAINT PF04385.15 BAM41619.1 - 1.8e-36 124.0 124.2 1.6e-06 28.1 2.4 17.0 16 1 0 16 16 16 10 Domain of unknown function, DUF529 RasGEF_N_2 PF14663.6 BAM41619.1 - 8.6e-05 22.9 15.4 0.011 16.1 0.0 6.1 6 0 0 6 6 6 1 Rapamycin-insensitive companion of mTOR RasGEF_N domain DUF4453 PF14627.6 BAM41619.1 - 0.00089 19.3 2.0 15 5.8 0.0 4.7 4 0 0 4 4 4 1 Domain of unknown function (DUF4453) Dioxygenase_C PF00775.21 BAM41619.1 - 0.0041 16.6 1.5 1.3 8.4 0.1 3.3 3 0 0 3 3 3 2 Dioxygenase DUF3310 PF11753.8 BAM41619.1 - 0.0092 16.2 0.0 74 3.7 0.0 3.9 3 0 0 3 3 3 0 Protein of unknwon function (DUF3310) Pih1_fungal_CS PF18482.1 BAM41619.1 - 0.11 13.0 28.6 0.077 13.5 1.1 6.2 6 0 0 6 6 6 0 Fungal Pih1 CS domain Myosin_N PF02736.19 BAM41619.1 - 0.2 11.5 2.2 3.6 7.5 0.1 3.8 2 0 0 2 2 2 0 Myosin N-terminal SH3-like domain FAINT PF04385.15 BAM41621.1 - 1.4e-11 44.3 26.2 2.3e-05 24.3 6.3 4.1 3 2 0 3 3 3 3 Domain of unknown function, DUF529 COX14 PF14880.6 BAM41622.1 - 0.057 13.3 0.3 0.1 12.5 0.3 1.4 1 0 0 1 1 1 0 Cytochrome oxidase c assembly FAINT PF04385.15 BAM41624.1 - 0.00045 20.2 0.2 0.0012 18.8 0.2 1.7 1 0 0 1 1 1 1 Domain of unknown function, DUF529 BLOC1_2 PF10046.9 BAM41624.1 - 0.00073 19.8 13.1 0.0059 16.9 1.8 2.8 2 1 0 2 2 2 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4201 PF13870.6 BAM41624.1 - 0.0045 16.7 20.0 0.045 13.5 1.5 2.6 2 1 0 2 2 2 2 Domain of unknown function (DUF4201) Fez1 PF06818.15 BAM41624.1 - 0.0083 16.6 5.2 0.0083 16.6 5.2 2.6 1 1 0 2 2 2 1 Fez1 zf-C4H2 PF10146.9 BAM41624.1 - 0.033 14.5 7.9 0.038 14.3 1.2 2.5 2 0 0 2 2 2 0 Zinc finger-containing protein TSC22 PF01166.18 BAM41624.1 - 0.043 14.1 0.6 0.11 12.8 0.6 1.7 1 0 0 1 1 1 0 TSC-22/dip/bun family Hemagglutinin PF00509.18 BAM41624.1 - 0.68 8.3 4.2 1.3 7.3 4.2 1.4 1 0 0 1 1 1 0 Haemagglutinin HAUS-augmin3 PF14932.6 BAM41624.1 - 1.3 8.5 17.2 0.035 13.7 5.7 2.4 2 1 0 2 2 2 0 HAUS augmin-like complex subunit 3 DUF948 PF06103.11 BAM41624.1 - 1.7 9.0 10.4 2.4 8.5 0.6 2.8 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF4200 PF13863.6 BAM41624.1 - 2.6 8.5 26.9 0.2 12.1 11.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) NPV_P10 PF05531.12 BAM41624.1 - 2.7 8.5 5.2 5.4 7.6 0.9 2.5 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein Baculo_PEP_C PF04513.12 BAM41624.1 - 4.1 7.4 6.2 1.1 9.3 0.7 2.1 2 0 0 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus Lipoprotein_7 PF01540.16 BAM41624.1 - 5.4 6.2 20.0 0.09 12.1 3.4 2.2 2 0 0 2 2 2 0 Adhesin lipoprotein ABC_tran PF00005.27 BAM41625.1 - 3.3e-31 108.6 0.0 1.3e-17 64.6 0.0 2.6 2 0 0 2 2 2 2 ABC transporter MeaB PF03308.16 BAM41625.1 - 8.3e-06 25.0 0.0 0.081 11.9 0.1 2.3 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB ABC_membrane PF00664.23 BAM41625.1 - 0.0001 22.0 27.4 0.0001 22.0 27.4 4.0 4 0 0 4 4 3 1 ABC transporter transmembrane region AAA_29 PF13555.6 BAM41625.1 - 0.00024 20.7 0.5 0.65 9.8 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain RsgA_GTPase PF03193.16 BAM41625.1 - 0.00027 20.9 1.0 0.04 13.8 0.1 2.4 2 0 0 2 2 2 1 RsgA GTPase Zeta_toxin PF06414.12 BAM41625.1 - 0.00027 20.3 0.1 0.06 12.6 0.0 2.3 2 0 0 2 2 2 1 Zeta toxin AAA_30 PF13604.6 BAM41625.1 - 0.0021 17.8 0.3 0.063 13.0 0.0 2.2 2 0 0 2 2 2 1 AAA domain T2SSE PF00437.20 BAM41625.1 - 0.0026 16.9 0.2 0.47 9.5 0.1 2.2 2 0 0 2 2 2 1 Type II/IV secretion system protein ATP_bind_1 PF03029.17 BAM41625.1 - 0.0055 16.5 0.8 1.6 8.5 0.1 2.5 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein AAA_23 PF13476.6 BAM41625.1 - 0.0073 16.8 1.2 1.6 9.2 0.1 2.7 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.19 BAM41625.1 - 0.008 15.6 1.6 0.051 13.0 0.2 2.5 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain cobW PF02492.19 BAM41625.1 - 0.0086 15.7 3.1 1.2 8.7 0.2 2.4 2 0 0 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 BAM41625.1 - 0.015 15.7 0.2 0.35 11.2 0.0 2.3 2 0 0 2 2 2 0 AAA ATPase domain MMR_HSR1 PF01926.23 BAM41625.1 - 0.016 15.3 0.7 1.4 9.0 0.1 3.2 3 0 0 3 3 3 0 50S ribosome-binding GTPase TsaE PF02367.17 BAM41625.1 - 0.018 15.1 0.3 9.5 6.2 0.0 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_10 PF12846.7 BAM41625.1 - 0.055 12.4 0.3 0.73 8.7 0.1 2.2 2 0 0 2 2 2 0 AAA-like domain SRP54 PF00448.22 BAM41625.1 - 0.071 12.7 0.1 0.16 11.5 0.1 1.6 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain FtsK_SpoIIIE PF01580.18 BAM41625.1 - 0.086 12.2 0.1 4.5 6.6 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family DUF815 PF05673.13 BAM41625.1 - 0.13 11.4 0.2 1.9 7.6 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF815) TrwB_AAD_bind PF10412.9 BAM41625.1 - 0.14 11.1 0.9 9.1 5.1 0.0 2.5 3 0 0 3 3 3 0 Type IV secretion-system coupling protein DNA-binding domain AAA_33 PF13671.6 BAM41625.1 - 0.18 12.0 0.6 22 5.2 0.0 2.5 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 BAM41625.1 - 0.2 11.7 4.4 3.4 7.7 0.4 2.9 2 0 0 2 2 2 0 Helicase HerA, central domain NB-ARC PF00931.22 BAM41625.1 - 0.26 10.4 2.1 0.19 10.9 0.1 1.8 2 0 0 2 2 2 0 NB-ARC domain MobB PF03205.14 BAM41625.1 - 0.86 9.5 2.4 2.2 8.2 0.3 2.2 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B ABC_tran PF00005.27 BAM41627.1 - 1.8e-30 106.2 0.0 7.9e-17 62.1 0.0 2.6 2 1 0 2 2 2 2 ABC transporter MeaB PF03308.16 BAM41627.1 - 1.7e-05 24.0 0.2 0.049 12.6 0.2 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB Zeta_toxin PF06414.12 BAM41627.1 - 0.00035 19.9 0.3 0.077 12.3 0.1 2.3 2 0 0 2 2 2 1 Zeta toxin RsgA_GTPase PF03193.16 BAM41627.1 - 0.00036 20.5 0.9 0.1 12.5 0.2 2.4 2 0 0 2 2 2 1 RsgA GTPase AAA_29 PF13555.6 BAM41627.1 - 0.00053 19.7 0.5 0.92 9.3 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain ABC_membrane PF00664.23 BAM41627.1 - 0.0013 18.5 26.7 0.0013 18.5 26.7 3.5 4 0 0 4 4 3 1 ABC transporter transmembrane region AAA_30 PF13604.6 BAM41627.1 - 0.006 16.3 0.4 0.17 11.6 0.1 2.2 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 BAM41627.1 - 0.015 15.7 0.1 0.36 11.2 0.0 2.3 2 0 0 2 2 2 0 AAA ATPase domain ATP_bind_1 PF03029.17 BAM41627.1 - 0.018 14.9 0.8 1.6 8.5 0.1 2.7 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein TsaE PF02367.17 BAM41627.1 - 0.038 14.0 0.9 8.7 6.4 0.0 2.4 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE T2SSE PF00437.20 BAM41627.1 - 0.043 12.9 0.1 8.2 5.4 0.0 2.2 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_21 PF13304.6 BAM41627.1 - 0.043 13.6 0.7 0.87 9.3 0.1 3.0 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 BAM41627.1 - 0.05 13.7 0.5 1.7 8.8 0.1 2.6 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_18 PF13238.6 BAM41627.1 - 0.11 13.1 0.1 21 5.7 0.1 2.7 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 BAM41627.1 - 0.11 11.9 0.1 4 6.7 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_23 PF13476.6 BAM41627.1 - 0.12 12.9 0.5 1.5 9.3 0.1 2.5 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 BAM41627.1 - 0.15 11.8 0.2 1.9 8.2 0.1 2.4 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase SRP54 PF00448.22 BAM41627.1 - 0.15 11.6 0.2 0.35 10.5 0.2 1.6 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_33 PF13671.6 BAM41627.1 - 0.17 12.1 0.9 16 5.6 0.0 2.4 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 BAM41627.1 - 0.17 11.5 8.1 1.2 8.7 0.2 2.6 3 0 0 3 3 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_22 PF13401.6 BAM41627.1 - 0.17 12.1 0.3 10 6.4 0.0 2.9 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 BAM41627.1 - 0.39 10.8 8.3 6.6 6.8 0.3 3.5 3 0 0 3 3 3 0 Helicase HerA, central domain SMC_N PF02463.19 BAM41627.1 - 1.1 8.7 5.0 0.71 9.3 0.1 2.9 4 0 0 4 4 4 0 RecF/RecN/SMC N terminal domain CYYR1 PF10873.8 BAM41628.1 - 0.029 14.8 0.1 0.03 14.8 0.1 1.0 1 0 0 1 1 1 0 Cysteine and tyrosine-rich protein 1 PDZ_3 PF17815.1 BAM41629.1 - 0.037 13.9 0.0 0.095 12.6 0.0 1.7 1 0 0 1 1 1 0 PDZ domain FAINT PF04385.15 BAM41634.1 - 0.024 14.7 0.7 0.058 13.5 0.7 1.7 1 0 0 1 1 1 0 Domain of unknown function, DUF529 Fez1 PF06818.15 BAM41634.1 - 0.35 11.3 18.1 0.055 13.9 9.6 2.4 2 0 0 2 2 2 0 Fez1 Synaptonemal_3 PF15191.6 BAM41634.1 - 1.9 8.3 6.5 3.1 7.6 1.8 2.6 2 0 0 2 2 2 0 Synaptonemal complex central element protein 3 TSC22 PF01166.18 BAM41634.1 - 4.2 7.8 9.8 0.4 11.0 3.9 2.4 2 0 0 2 2 2 0 TSC-22/dip/bun family Spc7 PF08317.11 BAM41634.1 - 9.4 5.0 31.0 5.8 5.7 17.0 2.3 2 0 0 2 2 2 0 Spc7 kinetochore protein ABC_tran PF00005.27 BAM41636.1 - 9.9e-33 113.6 0.0 3.1e-18 66.6 0.0 2.4 2 0 0 2 2 2 2 ABC transporter RsgA_GTPase PF03193.16 BAM41636.1 - 3.9e-06 26.9 0.5 0.0058 16.6 0.1 2.5 2 0 0 2 2 2 2 RsgA GTPase AAA_29 PF13555.6 BAM41636.1 - 1.8e-05 24.4 0.4 0.26 11.0 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain MeaB PF03308.16 BAM41636.1 - 6.8e-05 22.0 0.1 0.033 13.2 0.1 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 BAM41636.1 - 0.00011 22.7 0.1 0.043 14.2 0.0 2.4 2 0 0 2 2 2 1 AAA ATPase domain Zeta_toxin PF06414.12 BAM41636.1 - 0.00026 20.3 0.2 0.22 10.8 0.0 2.3 2 0 0 2 2 2 2 Zeta toxin AAA_30 PF13604.6 BAM41636.1 - 0.00071 19.3 0.8 0.015 15.0 0.1 2.3 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 BAM41636.1 - 0.0025 18.1 0.3 0.58 10.4 0.0 2.9 2 0 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.18 BAM41636.1 - 0.0044 16.4 0.3 0.24 10.7 0.1 2.2 2 0 0 2 2 2 1 FtsK/SpoIIIE family ATP_bind_1 PF03029.17 BAM41636.1 - 0.0046 16.8 2.7 0.81 9.4 0.2 2.7 3 0 0 3 3 2 2 Conserved hypothetical ATP binding protein T2SSE PF00437.20 BAM41636.1 - 0.0047 16.0 0.1 1.5 7.8 0.0 2.2 2 0 0 2 2 2 1 Type II/IV secretion system protein SMC_N PF02463.19 BAM41636.1 - 0.0067 15.9 2.3 0.075 12.5 0.2 2.7 3 0 0 3 3 2 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 BAM41636.1 - 0.011 16.2 1.7 1.2 9.6 0.3 2.5 2 0 0 2 2 2 0 AAA domain MobB PF03205.14 BAM41636.1 - 0.012 15.5 1.7 0.14 12.0 0.2 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B PRK PF00485.18 BAM41636.1 - 0.015 15.0 0.3 0.1 12.4 0.0 2.3 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family NACHT PF05729.12 BAM41636.1 - 0.031 14.2 2.1 6 6.8 0.1 3.3 3 0 0 3 3 3 0 NACHT domain AAA_24 PF13479.6 BAM41636.1 - 0.034 13.9 0.2 4.9 6.8 0.0 2.4 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 BAM41636.1 - 0.039 13.5 1.9 1.6 8.3 0.1 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain DUF815 PF05673.13 BAM41636.1 - 0.048 12.8 0.4 0.77 8.9 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_25 PF13481.6 BAM41636.1 - 0.052 13.1 0.0 3.5 7.2 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_33 PF13671.6 BAM41636.1 - 0.072 13.2 0.3 10 6.3 0.1 2.4 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.7 BAM41636.1 - 0.079 11.9 0.2 1.7 7.5 0.1 2.2 2 0 0 2 2 2 0 AAA-like domain AAA_21 PF13304.6 BAM41636.1 - 0.082 12.7 0.4 0.48 10.2 0.1 2.3 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system DUF87 PF01935.17 BAM41636.1 - 0.12 12.5 6.1 4.1 7.4 0.3 2.6 2 0 0 2 2 2 0 Helicase HerA, central domain AAA_18 PF13238.6 BAM41636.1 - 0.13 12.8 0.2 3.5 8.2 0.1 2.6 2 0 0 2 2 2 0 AAA domain DnaB_C PF03796.15 BAM41636.1 - 0.15 11.4 0.1 14 4.9 0.0 2.3 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain TrwB_AAD_bind PF10412.9 BAM41636.1 - 0.18 10.7 1.0 2.9 6.7 0.0 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain NTPase_1 PF03266.15 BAM41636.1 - 0.37 10.7 1.6 17 5.2 0.1 2.6 2 0 0 2 2 2 0 NTPase NB-ARC PF00931.22 BAM41636.1 - 1 8.5 3.1 0.4 9.8 0.1 1.8 2 0 0 2 2 2 0 NB-ARC domain MMR_HSR1 PF01926.23 BAM41636.1 - 1.1 9.4 6.8 0.57 10.3 0.1 3.2 4 0 0 4 4 2 0 50S ribosome-binding GTPase DUF5345 PF17280.2 BAM41637.1 - 0.089 12.8 1.1 0.13 12.3 1.1 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5345) FAINT PF04385.15 BAM41639.1 - 1e-26 92.8 199.2 1.4e-06 28.2 4.3 21.6 20 3 0 20 20 20 12 Domain of unknown function, DUF529 RasGEF_N_2 PF14663.6 BAM41639.1 - 8.7e-05 22.9 21.4 1.3 9.5 0.2 7.5 7 0 0 7 7 7 3 Rapamycin-insensitive companion of mTOR RasGEF_N domain SspB PF04386.13 BAM41639.1 - 0.0067 16.3 9.1 7.2 6.5 0.2 3.9 4 0 0 4 4 4 3 Stringent starvation protein B TPR_17 PF13431.6 BAM41639.1 - 0.098 13.1 0.1 2.1e+02 2.7 0.0 3.8 3 0 0 3 3 3 0 Tetratricopeptide repeat Flavi_propep PF01570.17 BAM41639.1 - 0.13 12.3 0.0 1.7e+02 2.2 0.0 3.9 4 0 0 4 4 4 0 Flavivirus polyprotein propeptide DUF2624 PF11116.8 BAM41639.1 - 6 7.8 8.8 18 6.3 0.1 5.0 4 0 0 4 4 4 0 Protein of unknown function (DUF2624) FAINT PF04385.15 BAM41640.1 - 2.3e-19 69.2 36.5 1.6e-06 28.0 2.3 4.9 5 0 0 5 5 5 4 Domain of unknown function, DUF529 ABC_tran PF00005.27 BAM41641.1 - 4.9e-29 101.6 0.0 3.5e-15 56.7 0.0 2.5 2 0 0 2 2 2 2 ABC transporter MeaB PF03308.16 BAM41641.1 - 0.00035 19.7 0.0 0.63 9.0 0.0 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_29 PF13555.6 BAM41641.1 - 0.00041 20.0 0.1 0.22 11.3 0.0 2.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain Zeta_toxin PF06414.12 BAM41641.1 - 0.00044 19.6 0.1 0.93 8.7 0.0 2.3 2 0 0 2 2 2 2 Zeta toxin AAA_16 PF13191.6 BAM41641.1 - 0.0011 19.3 0.0 0.31 11.4 0.0 2.4 2 0 0 2 2 2 1 AAA ATPase domain RsgA_GTPase PF03193.16 BAM41641.1 - 0.0012 18.8 0.2 2.2 8.1 0.1 2.6 2 0 0 2 2 2 2 RsgA GTPase T2SSE PF00437.20 BAM41641.1 - 0.0031 16.6 0.0 1.4 7.9 0.0 2.3 2 0 0 2 2 2 2 Type II/IV secretion system protein SMC_N PF02463.19 BAM41641.1 - 0.013 14.9 0.5 0.14 11.6 0.1 2.7 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 BAM41641.1 - 0.014 15.9 2.2 1.4 9.4 0.1 3.0 3 0 0 3 3 2 0 AAA domain AAA_30 PF13604.6 BAM41641.1 - 0.016 14.9 0.1 0.69 9.6 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.7 BAM41641.1 - 0.017 14.1 0.2 1.1 8.1 0.1 2.3 2 0 0 2 2 2 0 AAA-like domain DUF5070 PF16802.5 BAM41641.1 - 0.024 14.6 0.1 0.3 11.1 0.0 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5070) TrwB_AAD_bind PF10412.9 BAM41641.1 - 0.029 13.3 0.7 1.7 7.5 0.0 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain FtsK_SpoIIIE PF01580.18 BAM41641.1 - 0.032 13.6 0.6 0.3 10.4 0.1 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_25 PF13481.6 BAM41641.1 - 0.041 13.5 0.0 6.8 6.2 0.0 2.3 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 BAM41641.1 - 0.047 13.8 5.1 0.6 10.2 0.2 2.5 2 0 0 2 2 2 0 Helicase HerA, central domain NACHT PF05729.12 BAM41641.1 - 0.1 12.5 1.2 2.9 7.8 0.1 2.7 2 0 0 2 2 2 0 NACHT domain DUF815 PF05673.13 BAM41641.1 - 0.14 11.3 0.2 0.77 8.9 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_22 PF13401.6 BAM41641.1 - 0.23 11.7 0.6 34 4.7 0.1 2.6 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 BAM41641.1 - 0.37 10.4 6.1 2.7 7.6 0.1 2.9 3 0 0 3 3 3 0 CobW/HypB/UreG, nucleotide-binding domain MobB PF03205.14 BAM41641.1 - 0.44 10.4 2.2 6.2 6.7 0.2 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B FAINT PF04385.15 BAM41642.1 - 3.5e-05 23.8 40.2 0.00055 19.9 7.7 5.4 4 2 1 5 5 5 3 Domain of unknown function, DUF529 FAINT PF04385.15 BAM41643.1 - 2.5e-06 27.4 12.7 0.0042 17.1 0.4 3.3 3 0 0 3 3 3 2 Domain of unknown function, DUF529 FAINT PF04385.15 BAM41644.1 - 0.0001 22.3 3.7 0.00011 22.2 0.1 2.6 2 1 1 3 3 3 1 Domain of unknown function, DUF529 TraO PF10626.9 BAM41644.1 - 0.14 11.9 2.1 5.9 6.6 0.5 2.3 2 0 0 2 2 2 0 Conjugative transposon protein TraO ABC_tran PF00005.27 BAM41645.1 - 4.7e-30 104.9 0.0 1.4e-17 64.5 0.0 2.6 2 0 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 BAM41645.1 - 4.6e-07 29.8 15.7 4.6e-07 29.8 15.7 4.6 3 2 0 3 3 2 1 ABC transporter transmembrane region T2SSE PF00437.20 BAM41645.1 - 1.4e-05 24.3 0.2 0.073 12.1 0.1 2.3 2 0 0 2 2 2 2 Type II/IV secretion system protein RsgA_GTPase PF03193.16 BAM41645.1 - 7e-05 22.8 0.4 0.092 12.6 0.1 2.4 2 0 0 2 2 2 2 RsgA GTPase FtsK_SpoIIIE PF01580.18 BAM41645.1 - 9.8e-05 21.8 0.0 0.096 12.0 0.0 2.7 2 0 0 2 2 2 2 FtsK/SpoIIIE family AAA_16 PF13191.6 BAM41645.1 - 0.00011 22.6 0.0 0.56 10.6 0.0 2.5 2 0 0 2 2 2 2 AAA ATPase domain Zeta_toxin PF06414.12 BAM41645.1 - 0.00024 20.5 0.1 0.31 10.3 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin cobW PF02492.19 BAM41645.1 - 0.00065 19.3 2.6 0.084 12.5 0.2 2.6 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 BAM41645.1 - 0.00083 18.4 0.2 0.02 13.9 0.1 2.3 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_29 PF13555.6 BAM41645.1 - 0.0011 18.6 0.3 1.2 8.9 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain DUF87 PF01935.17 BAM41645.1 - 0.0029 17.7 4.7 0.018 15.2 0.3 2.8 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_22 PF13401.6 BAM41645.1 - 0.0032 17.7 0.5 0.59 10.4 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 BAM41645.1 - 0.0035 17.1 0.0 1.2 8.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain TrwB_AAD_bind PF10412.9 BAM41645.1 - 0.0038 16.2 0.3 0.69 8.8 0.1 2.3 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain NB-ARC PF00931.22 BAM41645.1 - 0.0046 16.2 0.4 0.047 12.9 0.1 2.3 2 0 0 2 2 2 1 NB-ARC domain TsaE PF02367.17 BAM41645.1 - 0.0049 16.9 1.0 3.7 7.6 0.1 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE SMC_N PF02463.19 BAM41645.1 - 0.0062 16.0 0.1 0.17 11.3 0.0 2.4 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_25 PF13481.6 BAM41645.1 - 0.0063 16.1 0.9 0.71 9.4 0.0 2.6 2 1 0 2 2 2 1 AAA domain AAA PF00004.29 BAM41645.1 - 0.013 16.0 0.5 2.4 8.6 0.0 2.7 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 BAM41645.1 - 0.019 15.4 4.9 0.76 10.2 0.1 3.3 3 1 0 3 3 3 0 AAA domain AAA_18 PF13238.6 BAM41645.1 - 0.033 14.7 0.3 19 5.8 0.2 3.1 2 0 0 2 2 2 0 AAA domain NACHT PF05729.12 BAM41645.1 - 0.044 13.7 2.5 4.5 7.2 0.3 2.6 2 0 0 2 2 2 0 NACHT domain MobB PF03205.14 BAM41645.1 - 0.048 13.6 3.5 0.69 9.8 0.6 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B NTPase_1 PF03266.15 BAM41645.1 - 0.1 12.5 3.0 5.9 6.8 0.3 2.7 2 0 0 2 2 2 0 NTPase AAA_19 PF13245.6 BAM41645.1 - 0.17 12.2 3.1 8 6.8 0.1 2.9 3 0 0 3 3 2 0 AAA domain AAA_21 PF13304.6 BAM41645.1 - 0.19 11.5 5.5 4.9 6.9 0.3 3.0 3 0 0 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_33 PF13671.6 BAM41645.1 - 0.29 11.3 2.2 16 5.6 0.2 2.5 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 BAM41645.1 - 0.3 10.8 3.3 8.1 6.1 0.1 2.5 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein SRP54 PF00448.22 BAM41645.1 - 0.31 10.7 2.7 0.64 9.6 0.2 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain MMR_HSR1 PF01926.23 BAM41645.1 - 0.47 10.6 5.2 0.13 12.4 0.7 2.3 2 0 0 2 2 2 0 50S ribosome-binding GTPase Dynamin_N PF00350.23 BAM41645.1 - 0.8 9.7 4.8 8.3 6.4 0.5 2.6 2 0 0 2 2 2 0 Dynamin family Rieske PF00355.26 BAM41646.1 - 1.1e-10 41.3 0.3 3.2e-10 39.8 0.3 1.8 1 1 0 1 1 1 1 Rieske [2Fe-2S] domain WD40 PF00400.32 BAM41647.1 - 1.3e-06 29.0 6.5 0.0013 19.5 1.5 3.0 2 0 0 2 2 2 2 WD domain, G-beta repeat WD40_like PF17005.5 BAM41647.1 - 0.00064 19.1 1.3 0.57 9.5 0.1 3.5 3 2 1 4 4 4 2 WD40-like domain Ge1_WD40 PF16529.5 BAM41647.1 - 0.021 13.8 0.1 0.82 8.6 0.0 2.3 1 1 1 2 2 2 0 WD40 region of Ge1, enhancer of mRNA-decapping protein RNA_pol_Rpb5_C PF01191.19 BAM41648.1 - 2.8e-32 110.4 0.2 4.8e-32 109.6 0.2 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb5, C-terminal domain RNA_pol_Rpb5_N PF03871.14 BAM41648.1 - 5.3e-21 75.0 0.8 7.8e-21 74.5 0.2 1.6 2 0 0 2 2 2 1 RNA polymerase Rpb5, N-terminal domain Mrr_cat PF04471.12 BAM41648.1 - 0.0028 17.6 0.0 0.0052 16.8 0.0 1.4 1 0 0 1 1 1 1 Restriction endonuclease Sof1 PF04158.14 BAM41648.1 - 0.013 15.8 0.3 0.027 14.7 0.3 1.5 1 0 0 1 1 1 0 Sof1-like domain DUF2040 PF09745.9 BAM41649.1 - 2.3e-14 53.5 10.1 2.3e-14 53.5 10.1 2.2 2 0 0 2 2 2 1 Coiled-coil domain-containing protein 55 (DUF2040) Ribosomal_S17 PF00366.20 BAM41650.1 - 2.7e-15 56.2 0.7 4.6e-15 55.5 0.7 1.4 1 0 0 1 1 1 1 Ribosomal protein S17 NPL PF17800.1 BAM41651.1 - 2.2e-11 44.3 0.1 2.2e-11 44.3 0.1 1.6 2 0 0 2 2 2 1 Nucleoplasmin-like domain Nucleoplasmin PF03066.15 BAM41651.1 - 0.039 14.5 0.0 0.078 13.5 0.0 1.5 1 0 0 1 1 1 0 Nucleoplasmin/nucleophosmin domain DUF4611 PF15387.6 BAM41651.1 - 0.11 12.7 5.2 0.16 12.2 5.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4611) NOA36 PF06524.12 BAM41651.1 - 0.62 9.3 5.7 0.63 9.3 5.7 1.1 1 0 0 1 1 1 0 NOA36 protein Arm PF00514.23 BAM41652.1 - 3.1e-83 271.6 9.4 2.7e-13 49.4 0.0 9.1 10 0 0 10 10 10 8 Armadillo/beta-catenin-like repeat HEAT_EZ PF13513.6 BAM41652.1 - 1.3e-24 86.2 0.1 3.2e-08 33.9 0.1 5.2 4 1 1 5 5 5 3 HEAT-like repeat HEAT_2 PF13646.6 BAM41652.1 - 1.8e-18 66.7 0.0 4.7e-06 26.9 0.1 5.5 3 2 2 5 5 5 4 HEAT repeats HEAT PF02985.22 BAM41652.1 - 3.8e-14 51.6 0.3 0.0012 18.9 0.0 6.4 6 0 0 6 6 6 3 HEAT repeat Arm_3 PF16186.5 BAM41652.1 - 1.1e-11 44.1 0.0 3.8e-11 42.4 0.0 2.0 2 0 0 2 2 2 1 Atypical Arm repeat IBB PF01749.20 BAM41652.1 - 1.2e-11 44.9 2.4 3.6e-11 43.3 2.4 1.9 1 0 0 1 1 1 1 Importin beta binding domain Arm_2 PF04826.13 BAM41652.1 - 4.5e-06 26.3 0.0 0.094 12.2 0.0 4.3 1 1 4 5 5 5 2 Armadillo-like RICTOR_V PF14668.6 BAM41652.1 - 1.7e-05 25.0 3.8 0.69 10.2 0.1 5.4 4 2 2 6 6 6 3 Rapamycin-insensitive companion of mTOR, domain 5 V-ATPase_H_C PF11698.8 BAM41652.1 - 0.0014 18.8 0.0 9.5 6.4 0.0 4.1 4 0 0 4 4 4 1 V-ATPase subunit H HEAT_PBS PF03130.16 BAM41652.1 - 0.012 16.3 2.9 2 9.3 0.5 4.6 4 1 0 4 4 4 0 PBS lyase HEAT-like repeat UNC45-central PF11701.8 BAM41652.1 - 0.033 14.1 0.0 34 4.4 0.0 4.0 2 1 4 6 6 6 0 Myosin-binding striated muscle assembly central CLASP_N PF12348.8 BAM41652.1 - 0.09 12.3 0.0 34 3.9 0.0 3.4 3 1 1 4 4 4 0 CLASP N terminal RRM_1 PF00076.22 BAM41653.1 - 1.1e-15 57.2 0.8 6.4e-11 41.9 0.0 3.2 3 0 0 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 BAM41653.1 - 0.021 14.8 0.0 0.13 12.3 0.0 2.3 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif NRDE-2 PF08424.10 BAM41653.1 - 0.027 13.6 6.4 0.17 11.0 0.3 3.5 2 2 2 4 4 4 0 NRDE-2, necessary for RNA interference Suf PF05843.14 BAM41653.1 - 0.043 13.8 1.0 1 9.3 0.0 2.7 2 0 0 2 2 2 0 Suppressor of forked protein (Suf) Tuberculin PF12198.8 BAM41653.1 - 4.2 7.5 7.5 3.4 7.8 0.1 2.6 2 0 0 2 2 2 0 Theoretical tuberculin protein UQ_con PF00179.26 BAM41654.1 - 1.2e-44 151.4 0.0 1.3e-44 151.2 0.0 1.0 1 0 0 1 1 1 1 Ubiquitin-conjugating enzyme Prok-E2_B PF14461.6 BAM41654.1 - 0.011 15.4 0.0 0.015 15.0 0.0 1.3 1 0 0 1 1 1 0 Prokaryotic E2 family B UFC1 PF08694.11 BAM41654.1 - 0.089 12.4 0.0 0.12 12.0 0.0 1.2 1 0 0 1 1 1 0 Ubiquitin-fold modifier-conjugating enzyme 1 WD40 PF00400.32 BAM41655.1 - 5.5e-06 27.0 0.3 1.8 9.6 0.0 5.3 5 0 0 5 5 5 1 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM41655.1 - 6.6e-05 23.1 0.1 0.017 15.4 0.0 3.5 3 1 1 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain STT3_PglB_C PF18527.1 BAM41655.1 - 0.023 14.8 1.4 0.059 13.5 0.2 2.3 3 0 0 3 3 3 0 STT3/PglB C-terminal beta-barrel domain ETRAMP PF09716.10 BAM41658.1 - 0.032 14.3 0.3 0.053 13.6 0.3 1.3 1 0 0 1 1 1 0 Malarial early transcribed membrane protein (ETRAMP) Yip1 PF04893.17 BAM41659.1 - 3.5e-05 23.6 12.4 3.5e-05 23.6 12.4 1.7 2 1 0 2 2 2 1 Yip1 domain YonK PF09642.10 BAM41659.1 - 0.15 12.2 0.7 2.5 8.3 0.1 2.3 2 0 0 2 2 2 0 YonK protein CRAL_TRIO PF00650.20 BAM41660.1 - 5.2e-26 91.3 0.3 9.7e-26 90.4 0.3 1.5 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_2 PF13716.6 BAM41660.1 - 0.018 15.2 0.2 0.054 13.7 0.2 1.8 1 0 0 1 1 1 0 Divergent CRAL/TRIO domain AAA PF00004.29 BAM41661.1 - 1.2e-11 45.2 0.0 5.4e-11 43.0 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 BAM41661.1 - 0.00097 19.6 0.0 0.003 18.0 0.0 1.8 1 0 0 1 1 1 1 AAA ATPase domain RuvB_N PF05496.12 BAM41661.1 - 0.003 17.3 0.0 0.019 14.7 0.0 2.0 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain NACHT PF05729.12 BAM41661.1 - 0.0042 17.0 0.1 0.026 14.4 0.0 2.5 3 0 0 3 3 3 1 NACHT domain AAA_18 PF13238.6 BAM41661.1 - 0.0049 17.4 0.0 0.014 15.9 0.0 1.9 1 0 0 1 1 1 1 AAA domain E6 PF00518.17 BAM41661.1 - 0.0076 16.7 0.8 0.019 15.4 0.8 1.6 1 0 0 1 1 1 1 Early Protein (E6) ABC_tran PF00005.27 BAM41661.1 - 0.0097 16.4 0.0 0.021 15.3 0.0 1.5 1 0 0 1 1 1 1 ABC transporter AAA_22 PF13401.6 BAM41661.1 - 0.0098 16.2 0.0 0.027 14.7 0.0 1.8 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 BAM41661.1 - 0.021 14.7 0.0 0.04 13.8 0.0 1.4 1 0 0 1 1 1 0 NTPase TsaE PF02367.17 BAM41661.1 - 0.044 13.8 0.0 0.15 12.0 0.0 1.9 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE RsgA_GTPase PF03193.16 BAM41661.1 - 0.047 13.6 0.0 0.11 12.4 0.0 1.6 1 0 0 1 1 1 0 RsgA GTPase IstB_IS21 PF01695.17 BAM41661.1 - 0.12 12.1 0.0 0.28 10.9 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_24 PF13479.6 BAM41661.1 - 0.16 11.7 0.0 0.33 10.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain Patatin PF01734.22 BAM41662.1 - 0.0027 17.9 0.0 0.028 14.6 0.0 2.5 1 1 0 1 1 1 1 Patatin-like phospholipase EF-hand_7 PF13499.6 BAM41665.1 - 2.9e-08 34.0 0.1 1.7e-07 31.6 0.1 1.9 2 0 0 2 2 2 1 EF-hand domain pair EF-hand_6 PF13405.6 BAM41665.1 - 2.8e-06 26.8 0.2 0.00041 20.0 0.0 3.1 3 0 0 3 3 3 1 EF-hand domain EF-hand_1 PF00036.32 BAM41665.1 - 0.0016 17.8 0.4 0.0076 15.7 0.0 2.3 2 0 0 2 2 2 1 EF hand EF-hand_8 PF13833.6 BAM41665.1 - 0.028 14.3 0.0 4.1 7.3 0.0 2.4 1 1 1 2 2 2 0 EF-hand domain pair UPF0154 PF03672.13 BAM41665.1 - 0.058 13.4 0.0 0.61 10.2 0.0 2.1 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0154) EF-hand_5 PF13202.6 BAM41665.1 - 0.059 12.9 1.2 0.39 10.3 0.0 2.4 3 0 0 3 3 3 0 EF hand HNH_repeat PF18780.1 BAM41665.1 - 0.095 12.5 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 Homing endonuclease repeat zf-C3HC4_2 PF13923.6 BAM41666.1 - 8.7e-12 44.7 7.4 1.3e-11 44.1 7.4 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 BAM41666.1 - 1e-11 44.5 7.2 1.6e-11 43.9 7.2 1.3 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 BAM41666.1 - 8.1e-11 41.6 5.2 1.2e-10 41.0 5.2 1.2 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 BAM41666.1 - 2.9e-10 40.0 2.4 2.9e-10 40.0 2.4 2.0 1 1 1 2 2 2 1 RING-type zinc-finger zf-RING_5 PF14634.6 BAM41666.1 - 4.6e-10 39.3 6.5 7.1e-10 38.7 6.5 1.3 1 0 0 1 1 1 1 zinc-RING finger domain zf-RING_2 PF13639.6 BAM41666.1 - 2e-09 37.6 9.8 3e-09 37.0 9.8 1.3 1 0 0 1 1 1 1 Ring finger domain Prok-RING_4 PF14447.6 BAM41666.1 - 2.8e-08 33.5 5.9 5.1e-08 32.7 5.9 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_4 PF15227.6 BAM41666.1 - 4.6e-07 29.9 8.4 7.6e-07 29.2 8.4 1.4 1 0 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-rbx1 PF12678.7 BAM41666.1 - 3.2e-05 24.1 7.3 6.8e-05 23.1 7.3 1.5 1 0 0 1 1 1 1 RING-H2 zinc finger domain Rtf2 PF04641.12 BAM41666.1 - 0.0017 17.8 1.1 0.0028 17.1 1.1 1.3 1 0 0 1 1 1 1 Rtf2 RING-finger zf-Nse PF11789.8 BAM41666.1 - 0.0021 17.9 3.4 0.0035 17.1 3.4 1.3 1 0 0 1 1 1 1 Zinc-finger of the MIZ type in Nse subunit zf-ANAPC11 PF12861.7 BAM41666.1 - 0.013 15.5 2.7 0.026 14.6 2.7 1.5 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_6 PF14835.6 BAM41666.1 - 0.029 14.2 3.2 0.049 13.5 3.2 1.3 1 0 0 1 1 1 0 zf-RING of BARD1-type protein Zn_ribbon_17 PF17120.5 BAM41666.1 - 0.071 12.7 4.2 0.13 11.9 4.2 1.5 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-RING_11 PF17123.5 BAM41666.1 - 0.25 11.1 9.0 0.27 11.0 4.4 2.4 2 0 0 2 2 2 0 RING-like zinc finger zf-RING_4 PF14570.6 BAM41666.1 - 0.47 10.3 8.2 1.8 8.4 8.2 1.9 1 1 0 1 1 1 0 RING/Ubox like zinc-binding domain zf-MIZ PF02891.20 BAM41666.1 - 0.63 9.8 6.8 1.1 9.1 6.8 1.4 1 0 0 1 1 1 0 MIZ/SP-RING zinc finger zf-UDP PF14569.6 BAM41666.1 - 0.82 9.8 4.8 1.4 9.0 3.4 2.1 1 1 0 1 1 1 0 Zinc-binding RING-finger Baculo_IE-1 PF05290.11 BAM41666.1 - 0.82 9.6 4.7 1.6 8.7 4.7 1.4 1 0 0 1 1 1 0 Baculovirus immediate-early protein (IE-0) IBR PF01485.21 BAM41666.1 - 1.6 9.0 9.7 3.9 7.8 8.9 2.0 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain Amidase PF01425.21 BAM41667.1 - 5e-69 233.4 0.0 6.9e-69 232.9 0.0 1.2 1 0 0 1 1 1 1 Amidase Picorna_P3A PF06363.11 BAM41667.1 - 0.019 14.9 0.1 0.049 13.5 0.1 1.6 1 0 0 1 1 1 0 Picornaviridae P3A protein Topo_C_assoc PF14370.6 BAM41667.1 - 0.08 12.9 0.7 0.27 11.2 0.0 2.1 2 0 0 2 2 2 0 C-terminal topoisomerase domain S-AdoMet_synt_C PF02773.16 BAM41668.1 - 3.8e-60 201.9 0.0 1.3e-59 200.1 0.0 1.8 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, C-terminal domain S-AdoMet_synt_M PF02772.16 BAM41668.1 - 3.7e-41 140.1 0.2 1e-40 138.7 0.1 1.8 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, central domain S-AdoMet_synt_N PF00438.20 BAM41668.1 - 5e-41 139.4 0.7 2.7e-40 137.0 0.2 2.1 2 0 0 2 2 2 1 S-adenosylmethionine synthetase, N-terminal domain DUF1725 PF08333.11 BAM41668.1 - 0.87 9.3 2.1 0.67 9.7 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1725) Ribosomal_L7Ae PF01248.26 BAM41669.1 - 4.7e-27 93.6 0.1 6.6e-27 93.1 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 BAM41669.1 - 0.0019 18.1 0.0 0.0024 17.7 0.0 1.2 1 0 0 1 1 1 1 PELOTA RNA binding domain RNase_P_pop3 PF08228.11 BAM41669.1 - 0.0025 17.9 0.0 0.0027 17.8 0.0 1.1 1 0 0 1 1 1 1 RNase P subunit Pop3 T3SSipB PF16535.5 BAM41669.1 - 0.047 14.2 0.7 0.071 13.6 0.7 1.2 1 0 0 1 1 1 0 Type III cell invasion protein SipB Fasciclin PF02469.22 BAM41671.1 - 6.7e-11 42.5 0.0 9.3e-11 42.0 0.0 1.2 1 0 0 1 1 1 1 Fasciclin domain S1 PF00575.23 BAM41672.1 - 7.5e-13 48.6 0.5 3.1e-07 30.6 0.2 2.5 2 0 0 2 2 2 2 S1 RNA binding domain DDE_Tnp_1_3 PF13612.6 BAM41672.1 - 0.18 11.8 0.7 1.4 8.9 0.0 2.4 2 0 0 2 2 2 0 Transposase DDE domain SF3A3 PF16837.5 BAM41672.1 - 4 8.0 11.6 9.7 6.8 1.9 3.5 3 0 0 3 3 3 0 Pre-mRNA-splicing factor SF3A3, of SF3a complex, Prp9 SNF2_N PF00176.23 BAM41673.1 - 4.4e-25 88.1 0.5 8.8e-25 87.1 0.5 1.4 1 0 0 1 1 1 1 SNF2 family N-terminal domain ResIII PF04851.15 BAM41673.1 - 3.1e-08 33.8 0.4 2.9e-06 27.4 0.1 2.6 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit Helicase_C PF00271.31 BAM41673.1 - 4.2e-08 33.5 3.2 1.9e-07 31.4 0.7 3.2 3 1 0 3 3 3 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 BAM41673.1 - 0.0019 17.4 0.1 0.0019 17.4 0.1 1.7 2 0 0 2 2 2 1 ERCC3/RAD25/XPB C-terminal helicase 4HBT PF03061.22 BAM41675.1 - 0.026 14.9 0.0 0.052 13.9 0.0 1.4 1 0 0 1 1 1 0 Thioesterase superfamily ELFV_dehydrog PF00208.21 BAM41676.1 - 1.4e-42 146.1 0.0 5.4e-42 144.2 0.0 1.9 1 1 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Bac_GDH PF05088.12 BAM41676.1 - 6.3e-20 70.4 1.0 2.4e-14 51.9 0.0 2.5 3 0 0 3 3 3 2 Bacterial NAD-glutamate dehydrogenase PgaPase_1 PF06162.12 BAM41676.1 - 0.056 13.2 0.2 0.33 10.7 0.0 2.3 2 0 0 2 2 2 0 Putative pyroglutamyl peptidase PgaPase_1 Amidohydro_2 PF04909.14 BAM41677.1 - 9.8e-06 25.5 0.0 1.3e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Amidohydrolase Amidohydro_1 PF01979.20 BAM41677.1 - 3.5e-05 23.3 0.0 7.1e-05 22.3 0.0 1.4 1 1 0 1 1 1 1 Amidohydrolase family Gpi1 PF05024.15 BAM41678.1 - 2.6e-27 96.1 16.8 6.1e-27 94.9 16.8 1.6 1 0 0 1 1 1 1 N-acetylglucosaminyl transferase component (Gpi1) UPF0058 PF01893.16 BAM41678.1 - 0.063 13.6 0.2 0.77 10.1 0.0 2.9 2 0 0 2 2 2 0 Uncharacterised protein family UPF0058 Pkinase PF00069.25 BAM41679.1 - 4.6e-46 157.3 0.5 8.6e-40 136.8 0.4 2.2 2 0 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 BAM41679.1 - 9.8e-15 54.5 0.1 1.6e-14 53.8 0.1 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase PMI_typeI PF01238.21 BAM41680.1 - 8.5e-50 170.0 0.0 7.9e-47 160.2 0.0 3.0 1 1 0 1 1 1 1 Phosphomannose isomerase type I AraC_binding PF02311.19 BAM41680.1 - 0.00045 20.1 0.3 0.022 14.7 0.0 2.6 2 0 0 2 2 2 1 AraC-like ligand binding domain Cupin_2 PF07883.11 BAM41680.1 - 0.021 14.6 0.1 0.35 10.6 0.0 2.3 2 0 0 2 2 2 0 Cupin domain JmjC PF02373.22 BAM41680.1 - 0.15 12.5 0.0 0.39 11.2 0.0 1.6 1 0 0 1 1 1 0 JmjC domain, hydroxylase Peptidase_C48 PF02902.19 BAM41681.1 - 1.2e-22 80.8 4.6 2e-22 80.1 4.1 1.7 1 1 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain Sec7 PF01369.20 BAM41682.1 - 3.8e-61 206.0 2.7 1.7e-60 203.8 2.7 2.3 1 0 0 1 1 1 1 Sec7 domain Sec7_N PF12783.7 BAM41682.1 - 3.6e-17 62.7 8.1 8.4e-17 61.5 2.6 3.3 2 0 0 2 2 2 1 Guanine nucleotide exchange factor in Golgi transport N-terminal EF_TS PF00889.19 BAM41682.1 - 4.2e-06 26.5 0.7 9.9e-06 25.3 0.7 1.6 1 0 0 1 1 1 1 Elongation factor TS DCB PF16213.5 BAM41682.1 - 0.0052 16.5 0.1 1.8 8.2 0.1 3.4 2 0 0 2 2 2 2 Dimerisation and cyclophilin-binding domain of Mon2 PPTA PF01239.22 BAM41683.1 - 6.7e-21 73.3 15.7 5.8e-08 32.2 0.3 5.6 5 0 0 5 5 5 4 Protein prenyltransferase alpha subunit repeat LRR_4 PF12799.7 BAM41683.1 - 0.00017 21.9 2.2 0.00064 20.1 2.2 2.0 1 0 0 1 1 1 1 Leucine Rich repeats (2 copies) LRR_9 PF14580.6 BAM41683.1 - 0.003 17.1 0.0 0.0071 15.9 0.0 1.6 1 0 0 1 1 1 1 Leucine-rich repeat AP2 PF00847.20 BAM41685.1 - 5.5e-13 48.9 0.9 1.1e-12 48.0 0.9 1.5 1 0 0 1 1 1 1 AP2 domain tRNA_synthFbeta PF17759.1 BAM41686.1 - 5.3e-29 101.2 0.0 1.4e-28 99.8 0.0 1.7 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain PhetRS_B1 PF18262.1 BAM41686.1 - 1.7e-21 76.2 0.1 3.9e-21 75.1 0.1 1.6 1 0 0 1 1 1 1 Phe-tRNA synthetase beta subunit B1 domain B3_4 PF03483.17 BAM41686.1 - 2.4e-19 69.7 0.0 4.3e-19 68.9 0.0 1.4 1 0 0 1 1 1 1 B3/4 domain B5 PF03484.15 BAM41686.1 - 1e-13 51.3 0.2 3.9e-09 36.7 0.1 3.5 3 1 0 3 3 3 2 tRNA synthetase B5 domain HEPN_Swt1 PF18731.1 BAM41687.1 - 0.0012 19.2 0.1 0.0049 17.2 0.1 1.9 2 0 0 2 2 2 1 Swt1-like HEPN C1_1 PF00130.22 BAM41688.1 - 0.0038 17.1 5.6 0.0038 17.1 5.6 2.0 1 1 1 2 2 2 1 Phorbol esters/diacylglycerol binding domain (C1 domain) C1_2 PF03107.16 BAM41688.1 - 0.027 14.8 4.9 0.027 14.8 4.9 2.0 2 0 0 2 2 2 0 C1 domain Zf_RING PF16744.5 BAM41688.1 - 0.73 10.0 4.7 1.6 8.9 4.7 1.6 1 0 0 1 1 1 0 KIAA1045 RING finger PHD PF00628.29 BAM41688.1 - 1.1 9.2 10.2 3.7 7.5 10.3 1.9 1 1 1 2 2 2 0 PHD-finger zf-RING_9 PF13901.6 BAM41688.1 - 1.4 8.9 10.7 2.8 7.9 7.8 2.4 2 0 0 2 2 2 0 Putative zinc-RING and/or ribbon Prok-RING_1 PF14446.6 BAM41688.1 - 1.5 8.8 7.8 4.4 7.3 7.8 1.8 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 HEAT PF02985.22 BAM41689.1 - 3.7e-07 29.8 6.4 0.005 17.0 0.0 6.4 6 1 1 7 7 7 1 HEAT repeat HEAT_2 PF13646.6 BAM41689.1 - 0.00012 22.4 0.3 0.12 12.8 0.0 3.8 3 0 0 3 3 3 1 HEAT repeats HEAT_EZ PF13513.6 BAM41689.1 - 0.0023 18.4 0.5 0.95 10.0 0.0 4.9 4 0 0 4 4 4 1 HEAT-like repeat MIF4G_like PF09088.11 BAM41689.1 - 0.0032 17.3 2.8 0.25 11.1 0.2 3.0 3 0 0 3 3 3 2 MIF4G like Vac14_Fab1_bd PF12755.7 BAM41689.1 - 0.037 14.6 3.1 1.3 9.6 0.0 4.4 4 0 0 4 4 4 0 Vacuolar 14 Fab1-binding region Hormone_recep PF00104.30 BAM41689.1 - 0.077 12.6 0.9 0.25 10.9 0.1 2.3 2 0 0 2 2 2 0 Ligand-binding domain of nuclear hormone receptor DUF5507 PF17612.2 BAM41689.1 - 0.081 12.6 0.1 12 5.5 0.0 2.7 2 0 0 2 2 2 0 Family of unknown function (DUF5507) HEAT_PBS PF03130.16 BAM41689.1 - 0.13 13.0 0.0 0.88 10.4 0.0 2.6 1 0 0 1 1 1 0 PBS lyase HEAT-like repeat DUF4042 PF13251.6 BAM41689.1 - 5 6.8 7.1 2.4 7.8 0.0 3.8 4 1 1 5 5 5 0 Domain of unknown function (DUF4042) RNA_pol_3_Rpc31 PF11705.8 BAM41690.1 - 0.71 10.1 13.8 9.2 6.4 13.8 2.1 1 1 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 FAST_1 PF06743.15 BAM41691.1 - 3.3e-09 36.6 3.4 0.59 10.1 0.1 7.3 5 1 2 7 7 7 3 FAST kinase-like protein, subdomain 1 Methyltrans_RNA PF04452.14 BAM41692.1 - 1.4e-32 112.9 0.0 1.3e-20 73.7 0.0 2.0 1 1 1 2 2 2 2 RNA methyltransferase SMC_Nse1 PF07574.13 BAM41693.1 - 0.09 12.7 2.9 0.18 11.7 2.1 1.8 1 1 1 2 2 2 0 Nse1 non-SMC component of SMC5-6 complex DUF1729 PF08354.10 BAM41694.1 - 0.032 13.1 0.1 0.045 12.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1729) DUF3007 PF11460.8 BAM41694.1 - 0.05 13.9 2.1 0.11 12.8 2.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3007) DUF3323 PF11796.8 BAM41694.1 - 2.4 8.0 5.3 9.7 6.0 5.3 1.9 1 1 0 1 1 1 0 Protein of unknown function N-terminus (DUF3323) NAC PF01849.18 BAM41695.1 - 1.1e-20 73.4 0.1 1.6e-20 72.9 0.1 1.3 1 0 0 1 1 1 1 NAC domain SRP68 PF16969.5 BAM41696.1 - 1.6e-25 90.1 10.2 1e-24 87.5 9.0 2.3 2 1 0 2 2 2 1 RNA-binding signal recognition particle 68 CDT1_C PF16679.5 BAM41696.1 - 0.95 9.9 5.5 1.1 9.7 0.2 2.6 2 0 0 2 2 2 0 DNA replication factor Cdt1 C-terminal domain Baculo_PEP_C PF04513.12 BAM41697.1 - 0.018 15.1 2.0 0.018 15.1 2.0 3.2 1 1 2 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus NPV_P10 PF05531.12 BAM41697.1 - 0.12 12.8 18.7 0.27 11.7 2.3 4.5 2 2 2 4 4 4 0 Nucleopolyhedrovirus P10 protein Matrilin_ccoil PF10393.9 BAM41697.1 - 0.28 11.1 4.9 1.9 8.4 1.3 3.5 3 1 0 3 3 3 0 Trimeric coiled-coil oligomerisation domain of matrilin DUF4806 PF16064.5 BAM41697.1 - 0.42 10.9 9.5 6.6 7.1 0.0 4.3 2 1 2 4 4 4 0 Domain of unknown function (DUF4806) Ada3 PF10198.9 BAM41697.1 - 0.43 10.7 20.2 0.029 14.5 5.4 3.3 2 1 1 3 3 3 0 Histone acetyltransferases subunit 3 SF-assemblin PF06705.11 BAM41697.1 - 0.46 9.8 37.7 9.9 5.4 20.4 2.1 1 1 0 1 1 1 0 SF-assemblin/beta giardin DUF1845 PF08900.11 BAM41697.1 - 0.46 10.2 7.3 0.68 9.6 0.4 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF1845) Helicase_IV_N PF12462.8 BAM41697.1 - 0.81 9.6 8.0 4.4 7.2 0.5 3.0 1 1 2 3 3 3 0 DNA helicase IV / RNA helicase N terminal Exonuc_VII_L PF02601.15 BAM41697.1 - 0.86 9.1 20.2 1.9 8.0 3.1 2.5 1 1 1 2 2 2 0 Exonuclease VII, large subunit KapB PF08810.10 BAM41697.1 - 0.96 9.6 7.0 5.2 7.3 0.7 2.8 2 1 0 2 2 2 0 Kinase associated protein B HSBP1 PF06825.12 BAM41697.1 - 1.5 8.7 10.5 0.99 9.3 0.2 4.1 3 1 0 4 4 4 0 Heat shock factor binding protein 1 Prismane PF03063.20 BAM41697.1 - 2.4 6.8 14.6 0.18 10.5 2.9 2.1 1 1 1 2 2 2 0 Prismane/CO dehydrogenase family SKA2 PF16740.5 BAM41697.1 - 2.6 7.9 17.1 0.21 11.4 0.8 3.9 2 2 0 3 3 3 0 Spindle and kinetochore-associated protein 2 Prominin PF05478.11 BAM41697.1 - 3.3 5.6 26.6 1.4 6.8 10.2 2.2 1 1 1 2 2 2 0 Prominin DUF2452 PF10504.9 BAM41697.1 - 3.9 6.9 11.6 0.16 11.4 2.1 2.8 1 1 2 3 3 3 0 Protein of unknown function (DUF2452) Phage_lysis PF03245.13 BAM41697.1 - 4.4 7.5 7.6 2.6 8.2 0.1 3.4 2 2 2 4 4 4 0 Bacteriophage Rz lysis protein Remorin_C PF03763.13 BAM41697.1 - 5 7.1 31.1 1.5 8.7 0.7 3.7 2 2 1 3 3 3 0 Remorin, C-terminal region RAP PF08373.10 BAM41698.1 - 5.4e-23 80.9 0.1 9.7e-23 80.0 0.1 1.4 1 0 0 1 1 1 1 RAP domain MTES_1575 PF18741.1 BAM41698.1 - 0.0015 18.7 0.0 0.0033 17.6 0.0 1.6 1 0 0 1 1 1 1 REase_MTES_1575 MMtag PF10159.9 BAM41698.1 - 0.07 13.4 1.6 0.21 11.9 0.1 2.1 2 0 0 2 2 2 0 Multiple myeloma tumor-associated RRP36 PF06102.12 BAM41700.1 - 1.6e-29 103.0 20.9 2.2e-29 102.6 20.9 1.1 1 0 0 1 1 1 1 rRNA biogenesis protein RRP36 AnfG_VnfG PF03139.15 BAM41700.1 - 0.0053 16.8 1.5 0.87 9.7 0.0 2.4 2 0 0 2 2 2 2 Vanadium/alternative nitrogenase delta subunit ABC_tran PF00005.27 BAM41701.1 - 1.6e-34 119.4 0.0 5.6e-17 62.5 0.0 2.6 2 0 0 2 2 2 2 ABC transporter Ribosomal_S10 PF00338.22 BAM41701.1 - 1.2e-21 76.8 0.0 2.5e-21 75.7 0.0 1.6 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e RLI PF04068.15 BAM41701.1 - 1.4e-12 47.2 4.6 3.2e-12 46.1 4.6 1.7 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI AAA_21 PF13304.6 BAM41701.1 - 7e-10 39.2 12.4 0.006 16.4 0.1 5.2 3 2 1 5 5 5 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 BAM41701.1 - 4.9e-08 33.1 0.8 0.00073 19.4 0.5 2.9 2 1 0 2 2 2 2 AAA ATPase domain Fer4 PF00037.27 BAM41701.1 - 2e-07 30.6 2.6 2e-07 30.6 2.6 2.0 2 0 0 2 2 1 1 4Fe-4S binding domain SMC_N PF02463.19 BAM41701.1 - 2.9e-07 30.2 3.3 0.1 12.0 0.0 4.2 4 0 0 4 4 4 2 RecF/RecN/SMC N terminal domain AAA_16 PF13191.6 BAM41701.1 - 2.4e-06 28.1 0.0 0.012 16.0 0.0 2.4 2 0 0 2 2 2 2 AAA ATPase domain Rad17 PF03215.15 BAM41701.1 - 7.5e-05 22.7 0.0 0.42 10.5 0.0 2.6 2 0 0 2 2 2 2 Rad17 P-loop domain AAA_29 PF13555.6 BAM41701.1 - 9.5e-05 22.1 0.5 0.57 10.0 0.1 2.4 2 0 0 2 2 2 2 P-loop containing region of AAA domain Fer4_6 PF12837.7 BAM41701.1 - 9.6e-05 22.3 2.4 9.6e-05 22.3 2.4 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain AAA_22 PF13401.6 BAM41701.1 - 0.00012 22.4 0.1 0.015 15.6 0.0 2.7 2 0 0 2 2 2 1 AAA domain Fer4_21 PF14697.6 BAM41701.1 - 0.00022 21.3 11.9 0.00041 20.4 11.9 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain RsgA_GTPase PF03193.16 BAM41701.1 - 0.00025 21.0 0.1 0.63 9.9 0.0 2.7 2 0 0 2 2 2 2 RsgA GTPase Fer4_7 PF12838.7 BAM41701.1 - 0.00044 20.8 5.4 0.0014 19.1 0.3 2.5 2 0 0 2 2 2 1 4Fe-4S dicluster domain AAA PF00004.29 BAM41701.1 - 0.00093 19.6 0.0 0.37 11.2 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 BAM41701.1 - 0.00094 19.1 0.9 0.079 12.9 0.0 2.4 2 0 0 2 2 2 1 NACHT domain AAA_23 PF13476.6 BAM41701.1 - 0.0022 18.5 3.4 0.034 14.7 0.0 2.9 3 0 0 3 3 2 1 AAA domain AAA_24 PF13479.6 BAM41701.1 - 0.0032 17.2 0.5 0.31 10.7 0.0 2.5 2 0 0 2 2 2 1 AAA domain RNA_helicase PF00910.22 BAM41701.1 - 0.0046 17.3 0.1 1.5 9.2 0.0 2.9 2 0 0 2 2 2 1 RNA helicase NB-ARC PF00931.22 BAM41701.1 - 0.0046 16.2 0.0 0.44 9.7 0.0 2.3 2 0 0 2 2 2 1 NB-ARC domain SRP54 PF00448.22 BAM41701.1 - 0.0059 16.3 1.6 0.27 10.8 0.0 2.3 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_30 PF13604.6 BAM41701.1 - 0.0062 16.3 0.1 0.5 10.1 0.0 2.3 2 0 0 2 2 2 1 AAA domain Fer4_2 PF12797.7 BAM41701.1 - 0.0076 16.3 0.8 0.0076 16.3 0.8 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.6 BAM41701.1 - 0.012 15.7 1.4 0.012 15.7 1.4 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_9 PF13187.6 BAM41701.1 - 0.013 15.6 12.3 0.026 14.7 12.3 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain TsaE PF02367.17 BAM41701.1 - 0.016 15.2 0.1 0.22 11.5 0.0 2.3 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_18 PF13238.6 BAM41701.1 - 0.022 15.3 0.0 4 8.0 0.0 2.8 2 0 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 BAM41701.1 - 0.027 14.7 0.1 7.2 6.9 0.0 3.2 3 1 0 3 3 2 0 Putative exonuclease SbcCD, C subunit VirE PF05272.11 BAM41701.1 - 0.037 13.8 0.1 6.4 6.5 0.0 2.6 2 0 0 2 2 2 0 Virulence-associated protein E AAA_5 PF07728.14 BAM41701.1 - 0.048 13.7 0.8 1.2 9.1 0.0 2.8 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 BAM41701.1 - 0.067 13.3 0.1 12 6.1 0.0 2.8 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 BAM41701.1 - 0.12 12.5 0.1 30 4.7 0.2 2.8 2 0 0 2 2 2 0 50S ribosome-binding GTPase NTPase_1 PF03266.15 BAM41701.1 - 0.19 11.7 1.4 4.4 7.2 0.0 2.6 2 0 0 2 2 2 0 NTPase Septin PF00735.18 BAM41701.1 - 0.21 10.8 0.8 2.6 7.2 0.0 2.7 3 0 0 3 3 3 0 Septin AAA_7 PF12775.7 BAM41701.1 - 0.39 10.2 2.8 1.4 8.4 0.0 2.5 3 0 0 3 3 2 0 P-loop containing dynein motor region Fer4_4 PF12800.7 BAM41701.1 - 1.1 9.9 15.1 0.48 11.1 2.9 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 BAM41701.1 - 1.3 10.0 10.8 0.071 14.1 0.9 2.6 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Peptidase_M22 PF00814.25 BAM41702.1 - 4.9e-57 193.7 0.0 5.9e-55 186.9 0.0 2.6 2 1 0 2 2 2 2 Glycoprotease family UPF0160 PF03690.13 BAM41704.1 - 1.2e-104 350.3 0.7 1.6e-104 349.9 0.7 1.2 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0160) PNRC PF15365.6 BAM41705.1 - 0.005 16.6 1.5 0.017 14.9 1.5 2.0 1 0 0 1 1 1 1 Proline-rich nuclear receptor coactivator motif RIO1 PF01163.22 BAM41706.1 - 5.6e-43 146.7 0.9 1e-42 145.9 0.9 1.4 1 0 0 1 1 1 1 RIO1 family Rio2_N PF09202.11 BAM41706.1 - 4.5e-31 106.9 0.7 1.1e-30 105.7 0.1 2.1 2 0 0 2 2 2 1 Rio2, N-terminal APH PF01636.23 BAM41706.1 - 3.3e-08 33.8 0.2 6.7e-05 22.9 0.2 2.4 1 1 1 2 2 2 2 Phosphotransferase enzyme family Kdo PF06293.14 BAM41706.1 - 8.5e-06 25.3 0.0 0.016 14.5 0.0 2.6 2 0 0 2 2 2 2 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase PF00069.25 BAM41706.1 - 0.01 15.2 0.2 0.027 13.8 0.2 1.7 1 1 0 1 1 1 0 Protein kinase domain DnaJ PF00226.31 BAM41708.1 - 3.5e-07 30.2 0.6 1e-06 28.8 0.6 1.7 1 0 0 1 1 1 1 DnaJ domain Anoct_dimer PF16178.5 BAM41708.1 - 0.33 10.6 8.7 0.55 9.9 8.7 1.2 1 0 0 1 1 1 0 Dimerisation domain of Ca+-activated chloride-channel, anoctamin TMEM51 PF15345.6 BAM41708.1 - 7.2 6.4 9.9 3.8 7.3 7.7 1.5 1 1 0 1 1 1 0 Transmembrane protein 51 DMPK_coil PF08826.10 BAM41709.1 - 0.019 15.1 0.5 0.019 15.1 0.5 2.6 3 0 0 3 3 3 0 DMPK coiled coil domain like DUF489 PF04356.12 BAM41709.1 - 0.15 12.1 0.1 0.67 9.9 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF489) FAM184 PF15665.5 BAM41709.1 - 4.9 6.9 8.4 0.36 10.6 1.4 2.4 3 0 0 3 3 3 0 Family with sequence similarity 184, A and B Ribosomal_S7e PF01251.18 BAM41710.1 - 5.9e-65 218.5 5.7 6.9e-65 218.2 5.7 1.0 1 0 0 1 1 1 1 Ribosomal protein S7e Glyco_transf_7N PF13733.6 BAM41710.1 - 0.083 12.5 0.2 0.12 12.0 0.2 1.3 1 0 0 1 1 1 0 N-terminal region of glycosyl transferase group 7 RsfS PF02410.15 BAM41712.1 - 1e-15 58.0 0.3 3.1e-15 56.4 0.1 1.9 2 0 0 2 2 2 1 Ribosomal silencing factor during starvation SMC_ScpB PF04079.16 BAM41712.1 - 0.14 11.7 0.2 0.37 10.4 0.2 1.6 1 1 0 1 1 1 0 Segregation and condensation complex subunit ScpB Methyltransf_10 PF05971.12 BAM41713.1 - 4.2e-45 154.3 2.2 7.4e-39 133.9 0.0 3.7 2 1 0 3 3 3 3 RNA methyltransferase PrmA PF06325.13 BAM41713.1 - 3.7e-07 29.8 4.8 7.5e-07 28.8 0.1 2.3 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) MTS PF05175.14 BAM41713.1 - 9.6e-07 28.5 0.0 2e-06 27.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 BAM41713.1 - 8.7e-06 25.6 0.6 0.00072 19.4 0.6 2.3 1 1 0 1 1 1 1 Methyltransferase domain UPF0020 PF01170.18 BAM41713.1 - 0.0012 18.6 0.0 0.0031 17.2 0.0 1.6 1 0 0 1 1 1 1 Putative RNA methylase family UPF0020 Methyltransf_25 PF13649.6 BAM41713.1 - 0.0092 16.7 0.0 0.026 15.2 0.0 1.8 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 BAM41713.1 - 0.012 15.6 0.0 0.029 14.3 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_11 PF08241.12 BAM41713.1 - 0.051 14.2 0.0 0.18 12.4 0.0 1.9 2 0 0 2 2 2 0 Methyltransferase domain Methyltransf_15 PF09445.10 BAM41713.1 - 0.075 12.6 1.9 13 5.4 0.1 3.1 3 0 0 3 3 3 0 RNA cap guanine-N2 methyltransferase DUF302 PF03625.14 BAM41713.1 - 0.099 12.5 0.0 11 6.0 0.0 2.5 2 0 0 2 2 2 0 Domain of unknown function DUF302 S10_plectin PF03501.15 BAM41714.1 - 8.3e-41 138.0 0.1 1e-40 137.7 0.1 1.1 1 0 0 1 1 1 1 Plectin/S10 domain BMC PF00936.19 BAM41715.1 - 0.083 12.9 0.0 0.24 11.4 0.0 1.7 1 0 0 1 1 1 0 BMC domain KH_1 PF00013.29 BAM41715.1 - 0.11 12.3 0.0 0.33 10.8 0.0 1.8 1 0 0 1 1 1 0 KH domain DUF1638 PF07796.11 BAM41717.1 - 0.0008 19.5 0.3 0.0069 16.5 0.1 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF1638) DUF1203 PF06718.11 BAM41717.1 - 0.029 14.6 0.1 0.077 13.3 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1203) DUF3854 PF12965.7 BAM41717.1 - 0.11 12.5 0.2 0.26 11.2 0.2 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3854) GIT_CC PF16559.5 BAM41717.1 - 1.6 8.6 11.5 4.3 7.3 2.8 3.3 3 0 0 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor CCDC-167 PF15188.6 BAM41717.1 - 3.2 8.2 13.5 0.62 10.4 3.3 3.0 3 1 0 3 3 3 0 Coiled-coil domain-containing protein 167 FlaC_arch PF05377.11 BAM41717.1 - 4.4 7.8 14.2 3.9 7.9 0.3 4.1 3 2 1 4 4 4 0 Flagella accessory protein C (FlaC) Sigma_reg_N PF13800.6 BAM41717.1 - 6.6 7.1 10.1 0.24 11.7 0.7 2.5 2 0 0 2 2 2 0 Sigma factor regulator N-terminal ATP-synt_C PF00137.21 BAM41718.1 - 1.1e-27 96.1 28.0 3.6e-14 52.9 11.1 2.1 2 0 0 2 2 2 2 ATP synthase subunit C FtsJ PF01728.19 BAM41719.1 - 9.2e-57 192.0 0.0 4.4e-56 189.8 0.0 2.1 2 0 0 2 2 2 1 FtsJ-like methyltransferase Spb1_C PF07780.12 BAM41719.1 - 2.4e-37 128.7 38.2 2.4e-37 128.7 38.2 3.9 2 1 1 3 3 3 1 Spb1 C-terminal domain DUF3381 PF11861.8 BAM41719.1 - 1.7e-32 112.5 15.1 1.7e-32 112.5 15.1 5.4 2 1 3 5 5 5 1 Domain of unknown function (DUF3381) bZIP_1 PF00170.21 BAM41720.1 - 0.004 17.2 1.9 0.0083 16.2 1.8 1.6 1 1 0 1 1 1 1 bZIP transcription factor XLF PF09302.11 BAM41720.1 - 0.024 14.8 0.7 0.045 13.9 0.6 1.5 1 1 0 1 1 1 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component Med9 PF07544.13 BAM41720.1 - 0.069 13.2 0.7 0.19 11.8 0.7 1.8 1 1 0 1 1 1 0 RNA polymerase II transcription mediator complex subunit 9 HalX PF08663.10 BAM41720.1 - 0.089 13.1 0.2 0.19 12.1 0.2 1.5 1 0 0 1 1 1 0 HalX domain zf-C3HC4_2 PF13923.6 BAM41721.1 - 0.00012 21.8 15.8 0.0003 20.5 15.8 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 BAM41721.1 - 0.00094 19.0 16.9 0.0024 17.7 16.9 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 BAM41721.1 - 0.0016 18.3 16.6 0.0037 17.1 16.6 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 BAM41721.1 - 0.0048 17.2 16.8 0.012 15.9 16.8 1.7 1 0 0 1 1 1 1 Ring finger domain DUF1741 PF08427.10 BAM41721.1 - 0.015 14.9 0.1 0.42 10.2 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1741) zf-RING_6 PF14835.6 BAM41721.1 - 0.017 15.0 9.0 0.043 13.7 9.0 1.7 1 0 0 1 1 1 0 zf-RING of BARD1-type protein zf-RING_5 PF14634.6 BAM41721.1 - 0.77 9.8 20.7 0.77 9.8 17.7 2.5 2 1 1 3 3 3 0 zinc-RING finger domain zf-C3HC4_4 PF15227.6 BAM41721.1 - 5.3 7.3 15.6 13 6.0 15.6 1.8 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_4 PF14570.6 BAM41721.1 - 5.8 6.8 12.9 2.6 7.9 9.6 2.1 2 0 0 2 2 2 0 RING/Ubox like zinc-binding domain Proteasome PF00227.26 BAM41722.1 - 4e-57 192.8 0.1 5e-57 192.5 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 BAM41722.1 - 3.8e-14 52.1 0.0 8.2e-14 51.0 0.0 1.6 1 0 0 1 1 1 1 Proteasome subunit A N-terminal signature Proteasome PF00227.26 BAM41723.1 - 2.5e-57 193.5 0.0 3.6e-57 193.0 0.0 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 BAM41723.1 - 1.9e-13 49.8 0.1 7.2e-13 48.0 0.2 2.0 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature Hydrolase_4 PF12146.8 BAM41724.1 - 0.0062 15.8 0.0 0.053 12.8 0.0 2.1 2 0 0 2 2 2 1 Serine aminopeptidase, S33 ER_lumen_recept PF00810.18 BAM41725.1 - 2.4e-47 161.5 13.3 4.1e-47 160.7 13.3 1.4 1 0 0 1 1 1 1 ER lumen protein retaining receptor Tfb4 PF03850.14 BAM41726.1 - 1.5e-30 106.6 2.1 2e-30 106.2 2.1 1.2 1 0 0 1 1 1 1 Transcription factor Tfb4 OCRE PF17780.1 BAM41727.1 - 2.7e-11 43.3 6.2 2.7e-11 43.3 6.2 2.0 2 0 0 2 2 2 1 OCRE domain zf-RanBP PF00641.18 BAM41727.1 - 2e-07 30.2 2.7 4.9e-07 28.9 2.7 1.7 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others Vps36-NZF-N PF16988.5 BAM41727.1 - 0.072 12.5 2.2 0.74 9.3 2.2 2.6 1 1 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain Auto_anti-p27 PF06677.12 BAM41727.1 - 0.2 11.9 0.4 0.44 10.8 0.4 1.6 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DUF35_N PF12172.8 BAM41727.1 - 1.8 8.5 3.9 4.1 7.4 3.9 1.6 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) DEAD PF00270.29 BAM41728.1 - 3.1e-45 154.1 0.0 5.4e-45 153.3 0.0 1.4 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM41728.1 - 1.7e-23 83.1 0.0 5.4e-23 81.5 0.0 1.9 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DUF4217 PF13959.6 BAM41728.1 - 4.9e-19 68.3 0.6 1.1e-18 67.2 0.6 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4217) ResIII PF04851.15 BAM41728.1 - 0.0007 19.6 0.0 0.0017 18.4 0.0 1.6 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Pkinase PF00069.25 BAM41729.1 - 8.6e-71 238.4 0.0 2.3e-70 237.0 0.0 1.6 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM41729.1 - 2.1e-35 122.2 0.0 2.9e-35 121.8 0.0 1.1 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 BAM41729.1 - 4.6e-06 26.2 0.0 7.4e-06 25.5 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 BAM41729.1 - 0.00014 21.2 0.0 0.007 15.7 0.0 2.2 2 0 0 2 2 2 1 Lipopolysaccharide kinase (Kdo/WaaP) family Haspin_kinase PF12330.8 BAM41729.1 - 0.00077 18.5 0.1 0.0011 18.0 0.1 1.2 1 0 0 1 1 1 1 Haspin like kinase domain Choline_kinase PF01633.20 BAM41729.1 - 0.0055 16.3 0.3 0.11 12.0 0.1 2.2 2 0 0 2 2 2 1 Choline/ethanolamine kinase APH PF01636.23 BAM41729.1 - 0.028 14.3 0.3 0.25 11.2 0.1 2.5 2 1 1 3 3 3 0 Phosphotransferase enzyme family RIO1 PF01163.22 BAM41729.1 - 0.099 12.2 0.1 0.22 11.1 0.1 1.5 1 1 0 1 1 1 0 RIO1 family CPW_WPC PF09717.10 BAM41731.1 - 1.4e-16 61.2 17.6 1.9e-15 57.5 7.5 2.7 3 0 0 3 3 3 2 Plasmodium falciparum domain of unknown function (CPW_WPC) tRNA_bind_2 PF13725.6 BAM41731.1 - 0.088 12.5 2.3 0.14 11.9 2.3 1.2 1 0 0 1 1 1 0 Possible tRNA binding domain DUF4777 PF16007.5 BAM41731.1 - 0.16 12.3 0.1 0.33 11.2 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4777) Porin_7 PF16956.5 BAM41732.1 - 0.036 13.7 0.0 0.037 13.7 0.0 1.1 1 0 0 1 1 1 0 Putative general bacterial porin DNA_pol_B_exo1 PF03104.19 BAM41734.1 - 3.6e-47 161.1 5.2 1e-46 159.6 5.2 1.9 1 0 0 1 1 1 1 DNA polymerase family B, exonuclease domain DUF1744 PF08490.12 BAM41734.1 - 6.1e-22 77.7 2.7 1.4e-21 76.5 2.7 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF1744) DNA_pol_B PF00136.21 BAM41734.1 - 4.1e-12 45.6 2.3 2.7e-08 33.0 0.1 2.8 3 0 0 3 3 3 2 DNA polymerase family B DNA_pol_B_exo2 PF10108.9 BAM41734.1 - 5.1e-09 36.1 0.2 3e-08 33.6 0.2 2.2 1 1 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB RNase_H_2 PF13482.6 BAM41734.1 - 1.2e-05 25.4 3.6 4.3e-05 23.6 0.0 3.6 3 1 1 4 4 4 1 RNase_H superfamily SET PF00856.28 BAM41736.1 - 5.8e-23 82.1 4.3 2.1e-22 80.3 1.0 3.2 2 1 0 2 2 2 1 SET domain AWS PF17907.1 BAM41736.1 - 0.006 16.6 8.3 0.006 16.6 8.3 3.4 5 0 0 5 5 5 1 AWS domain WD40 PF00400.32 BAM41737.1 - 9.1e-15 54.8 20.5 1.6e-05 25.6 0.3 6.9 7 0 0 7 7 7 3 WD domain, G-beta repeat NLE PF08154.12 BAM41737.1 - 3.8e-11 43.3 0.1 1.2e-10 41.7 0.1 2.0 1 0 0 1 1 1 1 NLE (NUC135) domain ANAPC4_WD40 PF12894.7 BAM41737.1 - 2.9e-08 33.9 0.3 1 9.7 0.0 5.0 1 1 5 6 6 6 4 Anaphase-promoting complex subunit 4 WD40 domain DUF3320 PF11784.8 BAM41737.1 - 0.11 12.4 0.0 0.22 11.5 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3320) DUF4205 PF13898.6 BAM41738.1 - 2.4e-57 194.5 0.2 2.1e-45 155.2 0.0 3.1 3 0 0 3 3 3 3 Domain of unknown function (DUF4205) UPF0020 PF01170.18 BAM41739.1 - 3.2e-08 33.5 0.0 2e-07 30.9 0.0 2.0 2 0 0 2 2 2 1 Putative RNA methylase family UPF0020 THUMP PF02926.17 BAM41739.1 - 0.00026 21.1 0.0 0.00045 20.3 0.0 1.4 1 0 0 1 1 1 1 THUMP domain BTV_NS2 PF04514.12 BAM41739.1 - 0.0024 16.8 0.2 0.004 16.1 0.2 1.3 1 0 0 1 1 1 1 Bluetongue virus non-structural protein NS2 Peptidase_C78 PF07910.13 BAM41740.1 - 4.1e-41 140.8 0.3 1.3e-40 139.1 0.2 1.9 2 0 0 2 2 2 1 Peptidase family C78 Peptidase_C54 PF03416.19 BAM41740.1 - 0.044 13.2 0.0 0.081 12.3 0.0 1.4 1 0 0 1 1 1 0 Peptidase family C54 Ubie_methyltran PF01209.18 BAM41741.1 - 7.1e-80 267.7 0.1 1.6e-79 266.6 0.1 1.5 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.12 BAM41741.1 - 2.5e-17 63.3 0.0 5.1e-17 62.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 BAM41741.1 - 4.6e-17 62.5 0.2 5.8e-16 59.0 0.2 2.3 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAM41741.1 - 1.6e-13 50.7 0.0 3e-13 49.8 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 BAM41741.1 - 1.2e-09 38.8 0.0 2.5e-09 37.7 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 BAM41741.1 - 4.8e-08 33.0 0.0 6.7e-08 32.5 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 BAM41741.1 - 0.015 15.2 0.0 0.041 13.7 0.0 1.8 1 1 0 1 1 1 0 Hypothetical methyltransferase SET PF00856.28 BAM41742.1 - 2.4e-15 57.3 0.0 2.4e-15 57.3 0.0 8.2 7 3 0 7 7 7 1 SET domain PHD PF00628.29 BAM41742.1 - 3.1e-12 46.2 79.9 1.5e-05 24.8 7.9 8.4 7 0 0 7 7 7 6 PHD-finger Bromodomain PF00439.25 BAM41742.1 - 3.1e-08 33.6 0.1 1.4e-07 31.5 0.1 2.3 1 0 0 1 1 1 1 Bromodomain zf-HC5HC2H PF13771.6 BAM41742.1 - 1.1e-06 28.8 3.9 1.1e-06 28.8 3.9 7.8 9 1 1 10 10 10 1 PHD-like zinc-binding domain zf-HC5HC2H_2 PF13832.6 BAM41742.1 - 3.5e-06 27.1 1.1 3.5e-06 27.1 1.1 7.8 8 0 0 8 8 8 2 PHD-zinc-finger like domain FYRN PF05964.14 BAM41742.1 - 0.00013 21.7 0.0 0.00046 20.0 0.0 1.9 1 0 0 1 1 1 1 F/Y-rich N-terminus TPT PF03151.16 BAM41743.1 - 1.9e-07 30.7 10.2 2.6e-07 30.3 10.2 1.1 1 0 0 1 1 1 1 Triose-phosphate Transporter family EamA PF00892.20 BAM41743.1 - 1.6e-05 25.1 23.3 0.0096 16.1 7.2 2.5 2 1 0 2 2 2 2 EamA-like transporter family PUNUT PF16913.5 BAM41743.1 - 0.0034 16.7 15.2 0.0039 16.5 9.9 2.3 2 0 0 2 2 2 1 Purine nucleobase transmembrane transport DUF5438 PF17506.2 BAM41743.1 - 0.12 12.7 2.1 0.55 10.6 2.1 2.1 1 0 0 1 1 1 0 Family of unknown function (DUF5438) PPR PF01535.20 BAM41745.1 - 8.2e-10 38.3 16.5 0.09 13.1 0.1 7.6 7 0 0 7 7 7 4 PPR repeat PPR_2 PF13041.6 BAM41745.1 - 8.7e-07 29.0 13.3 0.044 14.0 0.0 6.2 5 1 2 7 7 7 4 PPR repeat family PPR_3 PF13812.6 BAM41745.1 - 1.3e-05 25.1 1.6 2.3 8.3 0.2 4.7 4 1 1 5 5 5 2 Pentatricopeptide repeat domain PPR_long PF17177.4 BAM41745.1 - 0.0001 21.7 8.9 0.27 10.6 0.0 4.1 2 1 2 4 4 4 3 Pentacotripeptide-repeat region of PRORP Churchill PF06573.11 BAM41745.1 - 0.061 13.7 1.2 12 6.3 0.0 2.9 3 0 0 3 3 3 0 Churchill protein COX5A PF02284.16 BAM41745.1 - 0.26 11.3 1.5 16 5.6 0.1 3.3 3 1 1 4 4 4 0 Cytochrome c oxidase subunit Va AAA_2 PF07724.14 BAM41746.1 - 1.7e-48 164.9 0.1 2.9e-47 160.9 0.0 2.5 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA PF00004.29 BAM41746.1 - 2.8e-22 79.6 0.1 1.1e-10 42.0 0.0 3.0 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 BAM41746.1 - 9.2e-19 67.8 0.0 2.6e-12 46.9 0.0 3.4 2 1 0 2 2 2 2 AAA domain (dynein-related subfamily) ClpB_D2-small PF10431.9 BAM41746.1 - 1e-16 60.7 0.1 3e-16 59.2 0.1 1.9 1 0 0 1 1 1 1 C-terminal, D2-small domain, of ClpB protein Clp_N PF02861.20 BAM41746.1 - 1.6e-16 60.2 0.0 5.8e-07 29.5 0.0 2.7 2 0 0 2 2 2 2 Clp amino terminal domain, pathogenicity island component AAA_22 PF13401.6 BAM41746.1 - 7.1e-14 52.2 0.1 0.00016 22.0 0.1 4.7 3 1 1 4 4 4 2 AAA domain AAA_16 PF13191.6 BAM41746.1 - 9.3e-11 42.4 0.1 0.00034 21.0 0.0 4.2 4 1 0 4 4 3 2 AAA ATPase domain Sigma54_activat PF00158.26 BAM41746.1 - 2.8e-08 33.7 0.0 1.4e-05 24.9 0.0 2.4 2 0 0 2 2 2 1 Sigma-54 interaction domain Zeta_toxin PF06414.12 BAM41746.1 - 1.8e-07 30.7 0.1 0.00023 20.5 0.0 2.7 3 0 0 3 3 2 2 Zeta toxin AAA_7 PF12775.7 BAM41746.1 - 8.1e-07 28.7 0.0 0.059 12.9 0.0 2.9 3 0 0 3 3 2 2 P-loop containing dynein motor region Mg_chelatase PF01078.21 BAM41746.1 - 2e-06 27.3 0.1 0.028 13.8 0.0 3.3 2 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 BAM41746.1 - 6.4e-06 26.7 0.5 0.014 15.9 0.0 3.3 3 1 0 3 3 2 1 AAA domain RNA_helicase PF00910.22 BAM41746.1 - 7.8e-06 26.2 1.0 0.14 12.6 0.8 3.7 2 1 0 2 2 2 2 RNA helicase RuvB_N PF05496.12 BAM41746.1 - 1.3e-05 25.0 0.1 0.46 10.2 0.0 4.0 5 0 0 5 5 3 2 Holliday junction DNA helicase RuvB P-loop domain AAA_lid_9 PF17871.1 BAM41746.1 - 2.9e-05 23.9 0.5 0.00014 21.7 0.0 2.3 1 1 1 2 2 2 1 AAA lid domain TniB PF05621.11 BAM41746.1 - 4.4e-05 23.0 0.1 0.13 11.6 0.0 3.8 2 2 1 3 3 3 1 Bacterial TniB protein AAA_33 PF13671.6 BAM41746.1 - 0.00011 22.4 0.0 0.048 13.8 0.0 3.2 3 0 0 3 3 3 1 AAA domain AAA_3 PF07726.11 BAM41746.1 - 0.00011 22.1 0.0 0.14 12.0 0.0 3.1 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_30 PF13604.6 BAM41746.1 - 0.00021 21.1 0.0 0.091 12.5 0.0 2.7 2 1 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 BAM41746.1 - 0.00032 20.5 0.0 1.2 8.9 0.0 2.5 2 0 0 2 2 2 2 IstB-like ATP binding protein MCM PF00493.23 BAM41746.1 - 0.00036 19.7 0.8 0.72 8.9 0.0 3.2 2 1 0 2 2 2 1 MCM P-loop domain AAA_19 PF13245.6 BAM41746.1 - 0.00048 20.5 0.6 0.047 14.0 0.1 3.5 3 1 0 3 3 2 1 AAA domain DNA_pol3_delta2 PF13177.6 BAM41746.1 - 0.00072 19.4 0.0 1.9 8.2 0.0 2.8 2 0 0 2 2 2 2 DNA polymerase III, delta subunit KTI12 PF08433.10 BAM41746.1 - 0.0033 16.9 0.1 0.29 10.6 0.0 3.3 3 0 0 3 3 3 1 Chromatin associated protein KTI12 AAA_24 PF13479.6 BAM41746.1 - 0.0035 17.1 0.1 0.77 9.4 0.0 3.1 3 0 0 3 3 3 1 AAA domain Torsin PF06309.11 BAM41746.1 - 0.0037 17.4 0.0 0.016 15.3 0.0 2.0 2 0 0 2 2 2 1 Torsin ABC_tran PF00005.27 BAM41746.1 - 0.0043 17.6 0.1 2.1 8.9 0.0 3.0 2 0 0 2 2 2 1 ABC transporter DUF815 PF05673.13 BAM41746.1 - 0.0047 16.1 0.0 3 6.9 0.0 3.2 3 0 0 3 3 3 1 Protein of unknown function (DUF815) TIP49 PF06068.13 BAM41746.1 - 0.0055 16.0 0.3 0.73 9.0 0.0 3.1 4 0 0 4 4 3 1 TIP49 P-loop domain NTPase_1 PF03266.15 BAM41746.1 - 0.0065 16.4 0.0 1.3 9.0 0.0 3.0 2 0 0 2 2 2 1 NTPase ResIII PF04851.15 BAM41746.1 - 0.011 15.7 1.4 4.9 7.1 0.0 4.0 4 1 1 5 5 4 0 Type III restriction enzyme, res subunit AAA_11 PF13086.6 BAM41746.1 - 0.014 15.2 1.2 3.3 7.4 0.0 3.1 3 0 0 3 3 3 0 AAA domain AAA_29 PF13555.6 BAM41746.1 - 0.017 14.9 0.0 3.8 7.3 0.0 2.6 2 0 0 2 2 2 0 P-loop containing region of AAA domain Roc PF08477.13 BAM41746.1 - 0.023 14.9 0.0 4.9 7.4 0.0 2.7 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase RsgA_GTPase PF03193.16 BAM41746.1 - 0.025 14.5 0.0 10 6.0 0.0 2.7 2 0 0 2 2 2 0 RsgA GTPase AAA_25 PF13481.6 BAM41746.1 - 0.026 14.1 0.0 7.2 6.1 0.0 3.1 3 0 0 3 3 3 0 AAA domain Rad17 PF03215.15 BAM41746.1 - 0.031 14.2 0.0 0.37 10.7 0.0 2.5 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_10 PF12846.7 BAM41746.1 - 0.032 13.2 0.3 1.5 7.7 0.0 3.0 3 0 0 3 3 3 0 AAA-like domain MMR_HSR1 PF01926.23 BAM41746.1 - 0.038 14.1 0.0 9.8 6.3 0.0 3.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase NACHT PF05729.12 BAM41746.1 - 0.047 13.6 0.0 0.52 10.2 0.0 2.4 2 0 0 2 2 2 0 NACHT domain AAA_17 PF13207.6 BAM41746.1 - 0.078 13.4 0.2 12 6.3 0.1 3.2 2 1 0 2 2 2 0 AAA domain TsaE PF02367.17 BAM41746.1 - 0.14 12.2 0.0 3.3 7.7 0.0 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_23 PF13476.6 BAM41746.1 - 0.71 10.3 5.5 70 3.8 0.8 3.8 3 1 0 3 3 3 0 AAA domain Metallophos_2 PF12850.7 BAM41747.1 - 2.1e-17 63.8 0.0 2.7e-17 63.5 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 BAM41747.1 - 0.015 15.8 0.2 2.9 8.3 0.1 2.4 1 1 1 2 2 2 0 Calcineurin-like phosphoesterase DUF3273 PF11677.8 BAM41748.1 - 8.6e-104 346.5 4.0 1.1e-103 346.2 4.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3273) Radical_SAM PF04055.21 BAM41749.1 - 9.4e-12 45.6 0.0 1.4e-11 45.0 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 BAM41749.1 - 0.00026 21.1 0.0 0.00057 20.0 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain LCCL PF03815.19 BAM41751.1 - 2.5e-94 309.6 10.5 5.9e-27 93.6 0.7 4.8 4 0 0 4 4 4 4 LCCL domain SRCR PF00530.18 BAM41751.1 - 6.2e-33 113.3 10.6 1.2e-17 64.3 1.8 2.6 2 0 0 2 2 2 2 Scavenger receptor cysteine-rich domain PLAT PF01477.23 BAM41751.1 - 2e-12 47.7 0.4 6e-10 39.7 0.0 2.8 2 0 0 2 2 2 1 PLAT/LH2 domain Rxt3 PF08642.10 BAM41751.1 - 8.3e-11 42.8 0.0 0.0041 17.9 0.0 4.2 4 0 0 4 4 4 3 Histone deacetylation protein Rxt3 SRCR_2 PF15494.6 BAM41751.1 - 1.6e-06 28.5 2.9 0.036 14.6 0.2 3.4 3 0 0 3 3 3 2 Scavenger receptor cysteine-rich domain Laminin_G_3 PF13385.6 BAM41751.1 - 2.8e-05 24.3 0.0 7e-05 23.0 0.0 1.7 1 0 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily Hepsin-SRCR PF09272.10 BAM41751.1 - 0.0092 16.5 0.3 5.5 7.5 0.1 2.7 2 0 0 2 2 2 2 Hepsin, SRCR domain Fibrillarin PF01269.17 BAM41752.1 - 1.4e-88 295.9 0.1 1.8e-88 295.4 0.1 1.0 1 0 0 1 1 1 1 Fibrillarin GCD14 PF08704.10 BAM41752.1 - 0.00024 20.9 0.0 0.00033 20.4 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_25 PF13649.6 BAM41752.1 - 0.016 15.9 0.0 0.024 15.3 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltr_RsmB-F PF01189.17 BAM41752.1 - 0.031 13.9 0.0 0.049 13.3 0.0 1.3 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F DREV PF05219.12 BAM41752.1 - 0.17 11.0 0.0 0.22 10.6 0.0 1.1 1 0 0 1 1 1 0 DREV methyltransferase PAPS_reduct PF01507.19 BAM41753.1 - 0.027 14.5 0.8 0.027 14.5 0.8 1.8 1 1 1 2 2 2 0 Phosphoadenosine phosphosulfate reductase family RasGEF_N_2 PF14663.6 BAM41753.1 - 0.36 11.2 3.4 0.42 11.0 0.3 2.3 2 1 1 3 3 3 0 Rapamycin-insensitive companion of mTOR RasGEF_N domain LMBR1 PF04791.16 BAM41753.1 - 0.67 8.8 7.4 0.82 8.5 7.4 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein DUF16 PF01519.16 BAM41753.1 - 0.88 10.1 15.0 0.14 12.7 4.6 3.0 2 1 1 3 3 3 0 Protein of unknown function DUF16 PRP38 PF03371.15 BAM41754.1 - 2.8e-50 170.6 0.9 5.3e-50 169.7 0.9 1.3 1 0 0 1 1 1 1 PRP38 family Trm112p PF03966.16 BAM41754.1 - 1.3e-10 41.7 0.1 5.6e-10 39.7 0.0 2.1 2 0 0 2 2 2 1 Trm112p-like protein Pkinase PF00069.25 BAM41756.1 - 1.4e-42 145.9 0.0 4e-40 137.9 0.0 3.0 2 1 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM41756.1 - 4.3e-19 68.8 0.0 1.5e-15 57.2 0.0 2.7 1 1 0 2 2 2 2 Protein tyrosine kinase DUF5514 PF17633.2 BAM41756.1 - 0.067 13.4 0.4 0.14 12.4 0.4 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5514) ACDC PF14733.6 BAM41757.1 - 1.7e-22 79.5 4.6 2.8e-22 78.8 4.6 1.4 1 0 0 1 1 1 1 AP2-coincident C-terminal AP2 PF00847.20 BAM41757.1 - 5e-18 65.1 1.1 9.3e-18 64.2 1.1 1.5 1 0 0 1 1 1 1 AP2 domain Ubiq_cyt_C_chap PF03981.12 BAM41758.1 - 0.00045 20.3 0.0 0.00071 19.7 0.0 1.3 1 1 0 1 1 1 1 Ubiquinol-cytochrome C chaperone MMR_HSR1 PF01926.23 BAM41759.1 - 3.4e-15 56.1 0.1 7.5e-15 55.0 0.1 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 BAM41759.1 - 2e-05 24.1 0.1 0.00016 21.2 0.1 2.1 2 0 0 2 2 2 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 BAM41759.1 - 0.00025 21.0 0.1 1 9.3 0.2 2.6 2 0 0 2 2 2 2 RsgA GTPase SRPRB PF09439.10 BAM41759.1 - 0.00071 19.1 0.1 0.0013 18.2 0.1 1.4 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Arf PF00025.21 BAM41759.1 - 0.0016 17.9 0.1 0.028 13.9 0.0 2.4 2 0 0 2 2 2 1 ADP-ribosylation factor family Dynamin_N PF00350.23 BAM41759.1 - 0.0067 16.5 5.8 0.0098 16.0 2.8 2.9 2 1 0 2 2 2 1 Dynamin family AIG1 PF04548.16 BAM41759.1 - 0.0084 15.5 0.1 0.014 14.7 0.1 1.4 1 0 0 1 1 1 1 AIG1 family FtsK_SpoIIIE PF01580.18 BAM41759.1 - 0.013 14.8 0.0 0.025 13.9 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family Ras PF00071.22 BAM41759.1 - 0.042 13.4 0.2 1.3 8.6 0.0 2.3 2 0 0 2 2 2 0 Ras family G-alpha PF00503.20 BAM41759.1 - 0.045 12.9 0.0 0.67 9.1 0.0 2.1 2 0 0 2 2 2 0 G-protein alpha subunit Roc PF08477.13 BAM41759.1 - 0.12 12.6 0.3 0.52 10.5 0.1 2.1 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase cobW PF02492.19 BAM41759.1 - 0.18 11.3 1.3 1.9 8.0 0.2 2.7 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain LsmAD PF06741.13 BAM41760.1 - 2.3e-10 40.8 0.7 8.5e-10 39.0 0.7 2.1 1 1 0 1 1 1 1 LsmAD domain SM-ATX PF14438.6 BAM41760.1 - 0.0001 22.4 0.0 0.00027 21.0 0.0 1.8 1 0 0 1 1 1 1 Ataxin 2 SM domain LSM PF01423.22 BAM41760.1 - 0.0022 17.6 0.0 0.0076 15.9 0.0 1.9 2 0 0 2 2 2 1 LSM domain PAM2 PF07145.15 BAM41760.1 - 0.55 10.0 4.3 0.25 11.1 1.2 2.2 2 0 0 2 2 2 0 Ataxin-2 C-terminal region PPP4R2 PF09184.11 BAM41761.1 - 0.096 12.3 5.5 0.046 13.3 0.5 2.0 2 0 0 2 2 2 0 PPP4R2 DUF4834 PF16118.5 BAM41761.1 - 0.26 12.3 3.2 1.6 9.8 0.1 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4834) DEAD_2 PF06733.15 BAM41762.1 - 6.2e-50 169.2 0.9 1.1e-49 168.4 0.9 1.5 1 0 0 1 1 1 1 DEAD_2 Helicase_C_2 PF13307.6 BAM41762.1 - 4.8e-47 160.3 0.8 2e-46 158.3 0.0 2.5 3 0 0 3 3 3 1 Helicase C-terminal domain ResIII PF04851.15 BAM41762.1 - 9.2e-07 29.0 5.2 0.0012 18.9 0.2 3.7 3 2 0 3 3 3 2 Type III restriction enzyme, res subunit DEAD PF00270.29 BAM41762.1 - 3e-06 27.1 1.4 8.5e-05 22.4 0.4 2.3 2 0 0 2 2 2 1 DEAD/DEAH box helicase SNF2_N PF00176.23 BAM41762.1 - 0.0059 15.4 0.2 0.043 12.5 0.0 2.3 2 1 0 2 2 2 1 SNF2 family N-terminal domain PhoH PF02562.16 BAM41762.1 - 0.011 15.2 0.2 0.53 9.7 0.0 2.4 2 0 0 2 2 2 0 PhoH-like protein HTH_Tnp_Tc3_2 PF01498.18 BAM41763.1 - 0.12 12.6 0.2 0.35 11.2 0.2 1.8 1 0 0 1 1 1 0 Transposase TPR_2 PF07719.17 BAM41763.1 - 0.19 11.9 0.8 1.6 9.0 0.1 3.1 4 0 0 4 4 4 0 Tetratricopeptide repeat Vps26 PF03643.15 BAM41764.1 - 7.6e-90 300.6 2.6 8.6e-90 300.5 2.6 1.0 1 0 0 1 1 1 1 Vacuolar protein sorting-associated protein 26 TFIIA_gamma_C PF02751.14 BAM41765.1 - 0.00022 21.3 0.2 0.00078 19.5 0.1 2.0 1 1 0 1 1 1 1 Transcription initiation factor IIA, gamma subunit TFIIA_gamma_N PF02268.16 BAM41765.1 - 0.029 14.4 0.1 0.054 13.5 0.1 1.5 1 0 0 1 1 1 0 Transcription initiation factor IIA, gamma subunit, helical domain RSN1_7TM PF02714.15 BAM41766.1 - 1.4e-16 60.7 20.1 1e-15 57.8 17.2 2.3 2 0 0 2 2 2 2 Calcium-dependent channel, 7TM region, putative phosphate PHM7_cyt PF14703.6 BAM41767.1 - 0.064 13.5 0.0 0.13 12.5 0.0 1.7 1 1 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter Pkinase PF00069.25 BAM41769.1 - 8.5e-51 172.8 0.0 1.6e-50 171.9 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM41769.1 - 3.4e-25 88.8 0.0 5.8e-25 88.1 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 BAM41769.1 - 6.4e-05 22.4 0.0 0.00013 21.3 0.0 1.5 1 0 0 1 1 1 1 Kinase-like G10 PF01125.17 BAM41769.1 - 0.24 11.1 10.2 3.4 7.4 0.6 2.5 2 0 0 2 2 2 0 G10 protein tRNA-synt_1b PF00579.25 BAM41770.1 - 7.5e-51 173.2 0.0 8.7e-51 173.0 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) NADH_oxidored PF08040.11 BAM41770.1 - 0.13 12.0 0.2 10 5.9 0.0 2.4 2 0 0 2 2 2 0 MNLL subunit tRNA-synt_1f PF01921.18 BAM41770.1 - 0.13 11.1 0.0 0.27 10.1 0.0 1.4 1 0 0 1 1 1 0 tRNA synthetases class I (K) NTP_transferase PF00483.23 BAM41770.1 - 0.17 11.4 0.0 0.26 10.8 0.0 1.2 1 0 0 1 1 1 0 Nucleotidyl transferase SAM_1 PF00536.30 BAM41771.1 - 0.071 13.6 0.2 1.3 9.5 0.0 2.8 3 0 0 3 3 3 0 SAM domain (Sterile alpha motif) DEAD PF00270.29 BAM41772.1 - 3.5e-44 150.7 0.3 3.5e-44 150.7 0.3 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM41772.1 - 2.4e-31 108.3 3.3 8.2e-27 93.8 0.0 3.4 3 0 0 3 3 3 2 Helicase conserved C-terminal domain AAA_19 PF13245.6 BAM41772.1 - 0.0072 16.7 2.2 0.1 13.0 1.8 2.5 1 1 0 1 1 1 1 AAA domain Myticin-prepro PF10690.9 BAM41772.1 - 0.028 14.6 0.3 0.095 13.0 0.3 1.9 1 0 0 1 1 1 0 Myticin pre-proprotein from the mussel FapA PF03961.13 BAM41772.1 - 0.14 10.7 17.4 0.26 9.8 17.4 1.3 1 0 0 1 1 1 0 Flagellar Assembly Protein A TSP_NTD PF17804.1 BAM41772.1 - 6.9 6.9 19.2 16 5.7 19.2 1.6 1 0 0 1 1 1 0 Tail specific protease N-terminal domain WD40 PF00400.32 BAM41774.1 - 3.2e-08 34.1 13.8 7.1e-05 23.5 0.1 5.5 5 1 0 5 5 5 2 WD domain, G-beta repeat DUF1899 PF08953.11 BAM41774.1 - 1.1e-06 28.4 0.0 3e-06 27.0 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF1899) ANAPC4_WD40 PF12894.7 BAM41774.1 - 6.2e-06 26.4 0.3 0.00088 19.5 0.0 3.6 4 1 0 4 4 4 1 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 BAM41774.1 - 0.0016 17.5 0.0 0.0064 15.5 0.0 1.8 2 0 0 2 2 2 1 WD40 region of Ge1, enhancer of mRNA-decapping protein Ribosomal_L26 PF16906.5 BAM41775.1 - 1.4e-35 121.6 6.8 1.7e-35 121.3 6.8 1.1 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal KOW PF00467.29 BAM41775.1 - 4.9e-08 32.7 1.4 1.4e-07 31.2 1.4 1.8 1 0 0 1 1 1 1 KOW motif DUF5301 PF17225.3 BAM41775.1 - 0.072 13.5 0.0 0.12 12.8 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF5300) EF-hand_7 PF13499.6 BAM41776.1 - 9.8e-11 42.0 4.9 8.9e-06 26.1 1.4 2.1 2 0 0 2 2 2 2 EF-hand domain pair EF-hand_6 PF13405.6 BAM41776.1 - 8.5e-07 28.4 7.3 0.00037 20.2 1.3 3.1 3 1 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 BAM41776.1 - 6.9e-06 25.2 7.9 3.4e-05 23.1 1.2 3.5 4 0 0 4 4 4 1 EF hand UPF0154 PF03672.13 BAM41776.1 - 0.0059 16.6 0.0 0.029 14.4 0.0 2.1 2 0 0 2 2 2 1 Uncharacterised protein family (UPF0154) DNA_pol3_gamma3 PF12169.8 BAM41776.1 - 0.028 14.4 0.0 0.099 12.6 0.0 1.8 2 1 0 2 2 2 0 DNA polymerase III subunits gamma and tau domain III EF-hand_8 PF13833.6 BAM41776.1 - 0.037 13.9 1.9 0.41 10.5 0.3 3.0 2 1 2 4 4 4 0 EF-hand domain pair XkdW PF09636.10 BAM41776.1 - 0.097 12.8 0.0 0.17 12.0 0.0 1.5 1 1 0 1 1 1 0 XkdW protein EF-hand_5 PF13202.6 BAM41776.1 - 0.43 10.2 6.3 0.58 9.7 2.1 3.0 3 0 0 3 3 3 0 EF hand Peptidase_M24 PF00557.24 BAM41777.1 - 6.2e-42 143.6 0.1 7.4e-42 143.4 0.1 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF2573 PF10835.8 BAM41778.1 - 0.027 14.8 2.2 4.5 7.7 0.0 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF2573) DUF4258 PF14076.6 BAM41778.1 - 0.042 14.2 1.2 1 9.8 0.1 3.1 2 1 0 2 2 2 0 Domain of unknown function (DUF4258) UCH PF00443.29 BAM41779.1 - 1.3e-37 129.7 0.6 2.2e-37 129.0 0.6 1.4 1 1 0 1 1 1 1 Ubiquitin carboxyl-terminal hydrolase UCH_1 PF13423.6 BAM41779.1 - 8.2e-07 28.9 2.4 5.4e-05 22.9 0.8 2.4 2 1 0 2 2 2 2 Ubiquitin carboxyl-terminal hydrolase ubiquitin PF00240.23 BAM41779.1 - 8.3e-07 28.7 0.0 3.4e-06 26.7 0.0 2.1 2 0 0 2 2 2 1 Ubiquitin family Ubiquitin_2 PF14560.6 BAM41779.1 - 0.11 13.0 0.0 0.32 11.5 0.0 1.8 1 0 0 1 1 1 0 Ubiquitin-like domain RRM_1 PF00076.22 BAM41780.1 - 2e-30 104.4 0.9 5e-15 55.1 0.1 2.3 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 BAM41780.1 - 1.8e-08 34.3 0.1 0.0015 18.6 0.0 2.9 2 1 0 2 2 2 2 RNA recognition motif Zip PF02535.22 BAM41780.1 - 0.098 11.9 2.6 0.13 11.4 2.6 1.3 1 0 0 1 1 1 0 ZIP Zinc transporter Nup35_RRM_2 PF14605.6 BAM41780.1 - 0.1 12.6 0.0 0.77 9.8 0.0 2.2 2 0 0 2 2 2 0 Nup53/35/40-type RNA recognition motif Apt1 PF10351.9 BAM41780.1 - 0.47 9.3 5.0 0.65 8.8 5.0 1.2 1 0 0 1 1 1 0 Golgi-body localisation protein domain TFIIA PF03153.13 BAM41780.1 - 0.54 10.2 12.8 0.44 10.5 2.3 2.2 2 0 0 2 2 2 0 Transcription factor IIA, alpha/beta subunit SLC12 PF03522.15 BAM41780.1 - 2.5 7.0 4.9 3.8 6.4 4.9 1.3 1 0 0 1 1 1 0 Solute carrier family 12 Hid1 PF12722.7 BAM41780.1 - 6 4.9 8.5 8 4.4 8.5 1.1 1 0 0 1 1 1 0 High-temperature-induced dauer-formation protein SAPS PF04499.15 BAM41780.1 - 8.3 5.1 10.2 14 4.4 10.2 1.2 1 0 0 1 1 1 0 SIT4 phosphatase-associated protein Presenilin PF01080.17 BAM41780.1 - 8.8 5.0 10.5 14 4.3 10.5 1.3 1 0 0 1 1 1 0 Presenilin DUF155 PF02582.14 BAM41781.1 - 4.5e-18 66.0 1.3 5.2e-18 65.7 1.3 1.1 1 0 0 1 1 1 1 Uncharacterised ACR, YagE family COG1723 DER1 PF04511.15 BAM41782.1 - 7.6e-34 117.3 13.7 9.4e-34 117.0 13.7 1.1 1 0 0 1 1 1 1 Der1-like family TFIID-31kDa PF02291.15 BAM41783.1 - 5.1e-05 23.3 0.2 7.5e-05 22.8 0.2 1.2 1 0 0 1 1 1 1 Transcription initiation factor IID, 31kD subunit PCI PF01399.27 BAM41784.1 - 4.2e-18 65.8 2.2 5.6e-18 65.4 0.5 2.1 2 0 0 2 2 2 1 PCI domain RPN6_N PF18055.1 BAM41784.1 - 6.6e-11 42.6 0.0 1.7e-10 41.3 0.0 1.7 1 0 0 1 1 1 1 26S proteasome regulatory subunit RPN6 N-terminal domain RPN7 PF10602.9 BAM41784.1 - 0.016 14.9 0.6 0.038 13.7 0.6 1.6 1 0 0 1 1 1 0 26S proteasome subunit RPN7 RPN6_C_helix PF18503.1 BAM41784.1 - 0.031 14.0 0.0 0.088 12.6 0.0 1.8 1 0 0 1 1 1 0 26S proteasome subunit RPN6 C-terminal helix domain WD40 PF00400.32 BAM41785.1 - 0.012 16.5 5.0 4.2 8.4 0.3 3.9 4 0 0 4 4 4 0 WD domain, G-beta repeat PIGA PF08288.12 BAM41788.1 - 2.3e-27 95.4 0.1 5.8e-27 94.1 0.1 1.7 1 0 0 1 1 1 1 PIGA (GPI anchor biosynthesis) Glyco_transf_4 PF13439.6 BAM41788.1 - 3e-25 89.2 0.1 6.4e-25 88.1 0.1 1.6 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glycos_transf_1 PF00534.20 BAM41788.1 - 1.1e-20 73.9 0.0 3.8e-20 72.1 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 BAM41788.1 - 3.1e-18 66.5 0.0 6.2e-18 65.5 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 BAM41788.1 - 8.8e-07 29.5 0.0 0.00052 20.5 0.0 2.3 2 0 0 2 2 2 2 Glycosyl transferase 4-like domain Glyco_trans_4_2 PF13477.6 BAM41788.1 - 0.00017 21.6 0.3 0.00053 20.0 0.0 1.8 2 0 0 2 2 2 1 Glycosyl transferase 4-like PRESAN PF09687.10 BAM41789.1 - 0.0025 18.4 4.0 0.0025 18.4 4.0 2.9 4 0 0 4 4 4 1 Plasmodium RESA N-terminal AAA_7 PF12775.7 BAM41789.1 - 0.0045 16.5 0.0 0.0084 15.6 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region RNA_helicase PF00910.22 BAM41789.1 - 0.0062 16.9 0.9 0.021 15.2 0.0 2.4 3 1 0 3 3 3 1 RNA helicase ATPase_2 PF01637.18 BAM41789.1 - 0.0077 16.2 0.2 0.024 14.5 0.1 1.9 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 BAM41789.1 - 0.01 15.9 0.1 0.035 14.1 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_24 PF13479.6 BAM41789.1 - 0.011 15.4 0.0 0.018 14.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 BAM41789.1 - 0.012 15.6 0.0 0.022 14.7 0.0 1.4 1 0 0 1 1 1 0 NTPase NACHT PF05729.12 BAM41789.1 - 0.014 15.3 0.0 0.044 13.7 0.0 1.8 1 1 0 1 1 1 0 NACHT domain ABC_tran PF00005.27 BAM41789.1 - 0.021 15.4 0.0 0.047 14.2 0.0 1.6 1 0 0 1 1 1 0 ABC transporter AAA PF00004.29 BAM41789.1 - 0.023 15.1 0.0 0.049 14.1 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 BAM41789.1 - 0.03 14.7 0.0 0.075 13.4 0.0 1.6 2 0 0 2 2 1 0 AAA ATPase domain AAA_18 PF13238.6 BAM41789.1 - 0.042 14.4 0.0 0.096 13.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain KAP_NTPase PF07693.14 BAM41789.1 - 0.069 12.4 0.1 0.12 11.6 0.1 1.4 1 0 0 1 1 1 0 KAP family P-loop domain AFG1_ATPase PF03969.16 BAM41789.1 - 0.07 12.0 0.0 0.16 10.9 0.0 1.5 2 0 0 2 2 2 0 AFG1-like ATPase AAA_22 PF13401.6 BAM41789.1 - 0.071 13.4 0.0 0.27 11.5 0.0 2.0 2 0 0 2 2 2 0 AAA domain Septin PF00735.18 BAM41789.1 - 0.094 12.0 0.2 0.23 10.7 0.0 1.8 2 0 0 2 2 2 0 Septin APS_kinase PF01583.20 BAM41789.1 - 0.13 12.1 0.0 0.26 11.2 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase TsaE PF02367.17 BAM41789.1 - 0.14 12.2 0.0 0.29 11.2 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE T2SSE PF00437.20 BAM41789.1 - 0.26 10.3 0.0 0.41 9.7 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein RecG_N PF17190.4 BAM41789.1 - 0.66 10.7 3.7 2.1 9.1 0.1 3.2 3 1 1 4 4 3 0 RecG N-terminal helical domain DCP1 PF06058.13 BAM41790.1 - 3.8e-30 104.2 0.1 7.6e-30 103.2 0.1 1.5 1 0 0 1 1 1 1 Dcp1-like decapping family SAC3_GANP PF03399.16 BAM41792.1 - 2.2e-24 86.3 1.7 1e-23 84.2 1.7 1.8 1 1 0 1 1 1 1 SAC3/GANP family dUTPase_2 PF08761.11 BAM41792.1 - 0.036 14.3 0.2 0.12 12.5 0.2 1.9 1 0 0 1 1 1 0 dUTPase NUDIX PF00293.28 BAM41793.1 - 1.1e-06 28.8 0.0 2.3e-06 27.7 0.0 1.6 1 0 0 1 1 1 1 NUDIX domain WW PF00397.26 BAM41795.1 - 5.3e-06 26.4 1.0 0.002 18.2 0.3 2.6 2 0 0 2 2 2 2 WW domain Hepsin-SRCR PF09272.10 BAM41795.1 - 0.019 15.4 5.1 1.2 9.7 0.3 3.6 2 1 1 3 3 3 0 Hepsin, SRCR domain zf-U1 PF06220.12 BAM41795.1 - 0.035 13.9 1.4 0.071 12.9 1.4 1.5 1 0 0 1 1 1 0 U1 zinc finger Ribosomal_S27 PF01599.19 BAM41796.1 - 1.5e-21 76.3 2.3 1.5e-21 76.3 2.3 1.7 2 0 0 2 2 2 1 Ribosomal protein S27a Surp PF01805.20 BAM41797.1 - 9.3e-16 57.6 0.1 6.6e-15 54.8 0.1 2.5 2 0 0 2 2 2 1 Surp module RRM_1 PF00076.22 BAM41797.1 - 1.1e-13 50.7 0.0 5.1e-13 48.7 0.0 2.1 2 0 0 2 2 2 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) CTD_bind PF04818.13 BAM41797.1 - 4.7e-06 27.3 0.2 1.4e-05 25.8 0.2 1.9 1 0 0 1 1 1 1 RNA polymerase II-binding domain. RRM_7 PF16367.5 BAM41797.1 - 0.00027 21.0 0.0 0.03 14.4 0.0 2.6 2 0 0 2 2 2 1 RNA recognition motif CTK3 PF12243.8 BAM41797.1 - 0.00077 19.5 0.7 0.002 18.1 0.7 1.7 1 0 0 1 1 1 1 CTD kinase subunit gamma CTK3 RNaseH_pPIWI_RE PF13032.6 BAM41797.1 - 0.013 15.4 0.0 0.037 14.0 0.0 1.7 1 0 0 1 1 1 0 RNaseH domain of pPIWI_RE RRM_8 PF11835.8 BAM41797.1 - 0.026 14.7 0.0 0.072 13.3 0.0 1.7 1 0 0 1 1 1 0 RRM-like domain Nup35_RRM_2 PF14605.6 BAM41797.1 - 0.08 13.0 0.0 0.2 11.7 0.0 1.6 1 0 0 1 1 1 0 Nup53/35/40-type RNA recognition motif PPI_Ypi1 PF07491.11 BAM41799.1 - 9.1e-14 51.0 7.9 2.2e-13 49.8 7.9 1.7 1 1 0 1 1 1 1 Protein phosphatase inhibitor Lipoprotein_15 PF03640.15 BAM41799.1 - 0.097 12.2 0.1 0.25 10.9 0.0 1.8 2 0 0 2 2 2 0 Secreted repeat of unknown function Ribosomal_S2 PF00318.20 BAM41800.1 - 4e-29 101.4 0.3 7.7e-16 58.0 0.1 2.1 1 1 1 2 2 2 2 Ribosomal protein S2 40S_SA_C PF16122.5 BAM41800.1 - 0.0069 17.7 1.7 0.013 16.8 1.7 1.5 1 0 0 1 1 1 1 40S ribosomal protein SA C-terminus DDR_swiveling PF18427.1 BAM41800.1 - 0.11 12.5 0.1 0.16 12.0 0.1 1.2 1 0 0 1 1 1 0 DD-reactivating factor swiveling domain Clathrin PF00637.20 BAM41800.1 - 0.16 11.8 0.0 0.25 11.2 0.0 1.2 1 0 0 1 1 1 0 Region in Clathrin and VPS Cyclin_C PF02984.19 BAM41801.1 - 0.0092 16.1 3.1 0.064 13.3 0.0 3.5 4 0 0 4 4 4 1 Cyclin, C-terminal domain F-box-like PF12937.7 BAM41802.1 - 0.064 13.2 0.1 0.15 11.9 0.1 1.7 1 0 0 1 1 1 0 F-box-like F-box PF00646.33 BAM41802.1 - 0.13 12.2 4.0 0.078 12.9 1.2 2.2 2 0 0 2 2 2 0 F-box domain Rad9 PF04139.13 BAM41803.1 - 1.6e-18 67.1 0.3 3.6e-18 65.9 0.3 1.6 1 0 0 1 1 1 1 Rad9 RimM PF01782.18 BAM41803.1 - 1.2e-16 60.7 0.1 6.4e-16 58.4 0.0 2.2 2 0 0 2 2 2 1 RimM N-terminal domain tRNA-synt_1 PF00133.22 BAM41806.1 - 3.4e-187 623.4 0.0 3.9e-186 619.9 0.0 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 BAM41806.1 - 1.4e-38 132.2 0.1 2.8e-38 131.3 0.1 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 BAM41806.1 - 1.4e-11 43.8 0.1 0.0023 16.8 0.1 4.1 3 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 BAM41806.1 - 3.5e-07 29.9 0.2 2.9e-06 26.9 0.1 2.2 1 1 1 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 Val_tRNA-synt_C PF10458.9 BAM41806.1 - 0.00068 19.9 0.3 0.0022 18.3 0.3 1.9 1 0 0 1 1 1 1 Valyl tRNA synthetase tRNA binding arm tRNA-synt_1b PF00579.25 BAM41806.1 - 0.025 13.9 0.0 0.025 13.9 0.0 1.7 2 0 0 2 2 2 0 tRNA synthetases class I (W and Y) tRNA-synt_1f PF01921.18 BAM41806.1 - 0.049 12.6 0.0 0.096 11.6 0.0 1.4 1 0 0 1 1 1 0 tRNA synthetases class I (K) tRNA-synt_1e PF01406.19 BAM41806.1 - 0.093 12.1 0.3 0.7 9.2 0.0 2.4 3 0 0 3 3 3 0 tRNA synthetases class I (C) catalytic domain eIF-3c_N PF05470.12 BAM41807.1 - 1.9e-99 333.6 39.4 2e-97 326.9 39.4 2.2 1 1 0 1 1 1 1 Eukaryotic translation initiation factor 3 subunit 8 N-terminus PCI PF01399.27 BAM41807.1 - 1.9e-09 38.0 0.1 1.9e-09 38.0 0.1 3.4 4 0 0 4 4 4 1 PCI domain DUF924 PF06041.11 BAM41807.1 - 0.011 15.8 6.1 0.91 9.6 0.1 3.1 3 1 0 3 3 3 0 Bacterial protein of unknown function (DUF924) FeoC PF09012.10 BAM41807.1 - 0.11 12.6 0.1 0.6 10.2 0.0 2.3 2 0 0 2 2 2 0 FeoC like transcriptional regulator Phage_int_SAM_6 PF18644.1 BAM41807.1 - 0.17 11.9 2.5 0.43 10.6 0.1 2.9 2 1 1 3 3 3 0 Phage integrase SAM-like domain Creatinase_N_2 PF16189.5 BAM41808.1 - 2.3e-44 151.3 0.0 3.9e-42 144.1 0.0 2.3 2 0 0 2 2 2 2 Creatinase/Prolidase N-terminal domain Peptidase_M24 PF00557.24 BAM41808.1 - 1e-43 149.5 0.0 1.5e-43 148.9 0.0 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 BAM41808.1 - 2.3e-23 83.3 0.1 4.5e-19 69.4 0.0 2.6 3 0 0 3 3 3 2 Creatinase/Prolidase N-terminal domain Peptidase_M24_C PF16188.5 BAM41808.1 - 9e-17 60.9 0.1 2.4e-16 59.6 0.1 1.8 1 0 0 1 1 1 1 C-terminal region of peptidase_M24 Img2 PF05046.14 BAM41809.1 - 3.1e-22 78.6 0.0 4.1e-22 78.3 0.0 1.2 1 0 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) Ribosomal_S21e PF01249.18 BAM41810.1 - 3.7e-32 110.3 0.0 4e-32 110.2 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S21e Nucleoporin2 PF04096.14 BAM41811.1 - 1.2e-27 96.9 0.1 3.8e-27 95.2 0.0 1.9 2 1 0 2 2 2 1 Nucleoporin autopeptidase Ribosomal_L3 PF00297.22 BAM41813.1 - 1.4e-10 40.7 4.5 5.5e-08 32.2 2.9 2.4 1 1 1 2 2 2 2 Ribosomal protein L3 MMR_HSR1 PF01926.23 BAM41814.1 - 2e-18 66.5 0.0 4.1e-18 65.5 0.0 1.5 1 0 0 1 1 1 1 50S ribosome-binding GTPase Septin PF00735.18 BAM41814.1 - 6e-05 22.5 0.2 0.00013 21.3 0.0 1.6 2 0 0 2 2 2 1 Septin AIG1 PF04548.16 BAM41814.1 - 9.2e-05 21.9 0.0 0.00044 19.6 0.0 2.0 2 0 0 2 2 2 1 AIG1 family Dynamin_N PF00350.23 BAM41814.1 - 0.00014 21.9 1.2 0.14 12.2 0.2 2.7 3 0 0 3 3 3 2 Dynamin family GTP_EFTU PF00009.27 BAM41814.1 - 0.00031 20.3 0.0 0.01 15.4 0.0 2.3 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain FeoB_N PF02421.18 BAM41814.1 - 0.0026 17.3 0.2 0.007 15.9 0.0 1.8 2 1 0 2 2 2 1 Ferrous iron transport protein B RsgA_GTPase PF03193.16 BAM41814.1 - 0.0038 17.2 0.0 0.018 14.9 0.0 2.1 2 0 0 2 2 2 1 RsgA GTPase DUF3629 PF12302.8 BAM41814.1 - 0.0097 15.4 0.1 0.021 14.3 0.1 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF3629) Roc PF08477.13 BAM41814.1 - 0.014 15.6 0.0 0.033 14.4 0.0 1.7 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase Smoothelin PF12510.8 BAM41814.1 - 0.018 15.1 1.2 0.04 14.0 1.2 1.5 1 0 0 1 1 1 0 Smoothelin cytoskeleton protein SRPRB PF09439.10 BAM41814.1 - 0.028 13.9 1.5 0.041 13.3 0.0 1.9 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit RNA_helicase PF00910.22 BAM41814.1 - 0.052 13.9 0.0 0.12 12.8 0.0 1.6 1 0 0 1 1 1 0 RNA helicase AAA_15 PF13175.6 BAM41814.1 - 0.056 13.2 0.8 0.15 11.8 0.0 2.0 2 0 0 2 2 2 0 AAA ATPase domain V_ATPase_I PF01496.19 BAM41815.1 - 2.4e-244 813.0 9.6 2.7e-244 812.8 9.6 1.0 1 0 0 1 1 1 1 V-type ATPase 116kDa subunit family CNOT1_HEAT PF16418.5 BAM41816.1 - 0.04 14.0 1.1 0.34 11.0 0.4 2.7 1 1 1 2 2 2 0 CCR4-NOT transcription complex subunit 1 HEAT repeat YEATS PF03366.16 BAM41817.1 - 3.1e-22 78.3 0.0 6.3e-22 77.4 0.0 1.5 1 0 0 1 1 1 1 YEATS family DEAD PF00270.29 BAM41818.1 - 1.8e-22 80.0 0.1 4.1e-22 78.8 0.1 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM41818.1 - 9.3e-20 71.0 2.7 3.1e-19 69.3 0.1 3.0 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM41818.1 - 0.00015 21.8 0.1 0.00037 20.5 0.1 1.7 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit SDF PF00375.18 BAM41820.1 - 6.1e-17 61.7 17.4 7.8e-17 61.4 17.4 1.1 1 0 0 1 1 1 1 Sodium:dicarboxylate symporter family RRM_1 PF00076.22 BAM41821.1 - 4.4e-16 58.5 0.2 5e-16 58.3 0.2 1.1 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 BAM41821.1 - 0.0023 17.5 0.1 0.0026 17.4 0.1 1.0 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 BAM41821.1 - 0.0024 17.9 0.1 0.0031 17.5 0.1 1.2 1 0 0 1 1 1 1 RNA binding motif RRM_7 PF16367.5 BAM41821.1 - 0.0026 17.8 0.0 0.0031 17.6 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif RRM_occluded PF16842.5 BAM41821.1 - 0.022 14.6 0.0 0.039 13.8 0.0 1.4 1 1 0 1 1 1 0 Occluded RNA-recognition motif MRP-S28 PF10213.9 BAM41823.1 - 7.1e-06 26.5 0.0 5.3e-05 23.6 0.0 2.3 2 1 1 3 3 3 1 Mitochondrial ribosomal subunit protein FAST_1 PF06743.15 BAM41824.1 - 0.014 15.3 5.8 26 4.8 0.0 4.8 4 1 0 4 4 4 0 FAST kinase-like protein, subdomain 1 E1_dh PF00676.20 BAM41825.1 - 4.3e-83 278.7 0.0 5.5e-83 278.4 0.0 1.1 1 0 0 1 1 1 1 Dehydrogenase E1 component DXP_synthase_N PF13292.6 BAM41825.1 - 0.029 13.6 0.0 0.055 12.7 0.0 1.4 1 0 0 1 1 1 0 1-deoxy-D-xylulose-5-phosphate synthase MitMem_reg PF13012.6 BAM41826.1 - 0.0099 16.3 8.9 0.021 15.2 1.5 2.5 2 0 0 2 2 2 2 Maintenance of mitochondrial structure and function DUF2232 PF09991.9 BAM41826.1 - 0.13 11.4 0.2 0.24 10.6 0.2 1.5 1 0 0 1 1 1 0 Predicted membrane protein (DUF2232) Histidinol_dh PF00815.20 BAM41826.1 - 0.15 11.1 1.6 0.28 10.1 1.6 1.4 1 0 0 1 1 1 0 Histidinol dehydrogenase Acetyltransf_1 PF00583.25 BAM41827.1 - 1.4e-05 25.3 0.0 1.8e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 BAM41827.1 - 0.00029 20.8 0.0 0.00045 20.2 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 BAM41827.1 - 0.0044 17.0 0.0 0.0072 16.3 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 BAM41827.1 - 0.036 14.1 0.0 0.059 13.5 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 BAM41827.1 - 0.079 13.1 0.0 0.12 12.5 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain AAA_12 PF13087.6 BAM41828.1 - 5.9e-62 208.8 0.1 1.2e-61 207.9 0.1 1.5 1 0 0 1 1 1 1 AAA domain AAA_11 PF13086.6 BAM41828.1 - 5.4e-60 203.4 0.2 5.1e-29 101.9 0.0 2.5 1 1 1 2 2 2 2 AAA domain AAA_19 PF13245.6 BAM41828.1 - 1.4e-11 44.9 0.0 4.3e-11 43.3 0.0 1.8 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 BAM41828.1 - 2.8e-11 43.5 0.0 3.2e-10 40.0 0.0 2.4 2 1 0 2 2 2 1 AAA domain Viral_helicase1 PF01443.18 BAM41828.1 - 2.1e-06 27.7 0.1 0.015 15.0 0.0 3.3 3 0 0 3 3 3 1 Viral (Superfamily 1) RNA helicase UvrD-helicase PF00580.21 BAM41828.1 - 2.6e-06 27.2 0.0 1e-05 25.2 0.0 1.9 2 0 0 2 2 2 1 UvrD/REP helicase N-terminal domain Helicase_RecD PF05127.14 BAM41828.1 - 0.0013 18.6 0.1 0.0099 15.8 0.0 2.6 2 1 0 2 2 2 1 Helicase ResIII PF04851.15 BAM41828.1 - 0.0045 17.0 0.0 0.018 15.0 0.0 2.0 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.29 BAM41828.1 - 0.0083 15.9 0.1 0.042 13.6 0.0 2.2 2 0 0 2 2 2 1 DEAD/DEAH box helicase UvrD_C_2 PF13538.6 BAM41828.1 - 0.014 15.2 0.0 0.034 14.0 0.0 1.7 1 0 0 1 1 1 0 UvrD-like helicase C-terminal domain AAA_7 PF12775.7 BAM41828.1 - 0.024 14.2 0.0 0.06 12.9 0.0 1.7 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA PF00004.29 BAM41828.1 - 0.031 14.7 0.0 0.088 13.2 0.0 1.8 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) PhoH PF02562.16 BAM41828.1 - 0.033 13.7 0.0 0.095 12.1 0.0 1.8 1 0 0 1 1 1 0 PhoH-like protein AAA_22 PF13401.6 BAM41828.1 - 0.043 14.1 0.0 0.14 12.5 0.0 1.8 1 0 0 1 1 1 0 AAA domain DUF2075 PF09848.9 BAM41828.1 - 0.064 12.5 0.0 0.15 11.3 0.0 1.7 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) T2SSE PF00437.20 BAM41828.1 - 0.066 12.3 0.0 0.13 11.3 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_24 PF13479.6 BAM41828.1 - 0.18 11.5 0.3 1.2 8.8 0.3 2.1 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 BAM41828.1 - 0.19 11.5 0.2 0.42 10.4 0.2 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain GYF PF02213.16 BAM41829.1 - 3e-05 23.6 2.9 5e-05 22.9 2.9 1.4 1 0 0 1 1 1 1 GYF domain ATP-synt_ab PF00006.25 BAM41830.1 - 3.7e-98 327.4 0.0 4.9e-98 327.0 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 BAM41830.1 - 1.6e-37 128.0 0.0 2.8e-37 127.3 0.0 1.4 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 BAM41830.1 - 0.00038 20.9 0.1 0.00099 19.6 0.1 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain Baseplate PF16774.5 BAM41832.1 - 0.1 12.5 0.1 0.12 12.3 0.1 1.1 1 0 0 1 1 1 0 Baseplate protein Ribosomal_60s PF00428.19 BAM41833.1 - 6.9e-22 77.9 7.8 8.5e-22 77.5 7.8 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein FANCI_S1-cap PF14674.6 BAM41833.1 - 0.13 12.3 0.5 0.23 11.6 0.1 1.7 2 1 0 2 2 2 0 FANCI solenoid 1 cap DEAD PF00270.29 BAM41834.1 - 2.7e-14 53.3 0.7 5.5e-14 52.3 0.1 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM41834.1 - 5.7e-08 33.1 7.2 5.7e-08 33.1 7.2 3.2 2 2 0 2 2 2 1 Helicase conserved C-terminal domain CLU PF13236.6 BAM41836.1 - 1.9e-07 31.2 0.0 4.6e-07 29.9 0.0 1.7 1 0 0 1 1 1 1 Clustered mitochondria eIF3_p135 PF12807.7 BAM41836.1 - 2.2e-06 27.8 0.0 5.4e-06 26.5 0.0 1.6 1 0 0 1 1 1 1 Translation initiation factor eIF3 subunit 135 Maf PF02545.14 BAM41837.1 - 4.2e-34 117.8 0.0 5.2e-34 117.5 0.0 1.1 1 0 0 1 1 1 1 Maf-like protein B-block_TFIIIC PF04182.12 BAM41838.1 - 2.1e-20 72.6 0.2 2.1e-20 72.6 0.2 3.7 4 0 0 4 4 4 1 B-block binding subunit of TFIIIC MarR PF01047.22 BAM41838.1 - 0.055 13.4 0.4 7.6 6.5 0.0 3.8 4 0 0 4 4 4 0 MarR family Spore_III_AB PF09548.10 BAM41838.1 - 0.096 12.8 4.4 0.11 12.6 1.8 2.4 2 0 0 2 2 2 0 Stage III sporulation protein AB (spore_III_AB) Neuro_bHLH PF12533.8 BAM41839.1 - 0.86 10.8 6.2 0.39 11.9 1.0 2.3 2 1 0 2 2 2 0 Neuronal helix-loop-helix transcription factor Enolase_C PF00113.22 BAM41840.1 - 6.1e-151 501.7 0.2 8.1e-151 501.3 0.2 1.1 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 BAM41840.1 - 1.2e-52 177.6 0.0 2.2e-52 176.7 0.0 1.5 1 0 0 1 1 1 1 Enolase, N-terminal domain MR_MLE_C PF13378.6 BAM41840.1 - 7.1e-10 38.8 0.0 1.4e-09 37.8 0.0 1.4 1 0 0 1 1 1 1 Enolase C-terminal domain-like MAAL_C PF07476.11 BAM41840.1 - 1.3e-06 27.7 0.1 2.2e-06 27.0 0.1 1.2 1 0 0 1 1 1 1 Methylaspartate ammonia-lyase C-terminus UPRTase PF14681.6 BAM41840.1 - 0.082 12.3 0.0 0.27 10.7 0.0 1.8 2 1 0 2 2 2 0 Uracil phosphoribosyltransferase TUDOR PF00567.24 BAM41841.1 - 0.00071 19.6 0.1 0.00071 19.6 0.1 2.5 3 1 0 3 3 3 1 Tudor domain Com_YlbF PF06133.11 BAM41841.1 - 0.011 16.4 12.3 0.46 11.1 2.6 2.5 2 0 0 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA Peptidase_U32_C PF16325.5 BAM41841.1 - 0.087 13.1 0.6 0.28 11.5 0.5 1.9 2 0 0 2 2 2 0 Peptidase family U32 C-terminal domain DUF4358 PF14270.6 BAM41841.1 - 2.5 8.4 9.2 0.55 10.6 3.2 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF4358) PCRF PF03462.18 BAM41841.1 - 4.4 7.1 8.2 1.7 8.5 1.2 2.3 2 0 0 2 2 2 0 PCRF domain BSD PF03909.17 BAM41842.1 - 8.4e-06 25.7 0.5 0.00012 22.0 0.4 2.8 2 0 0 2 2 2 1 BSD domain SART-1 PF03343.13 BAM41843.1 - 3e-49 168.2 49.3 6.5e-31 107.6 45.8 2.9 1 1 1 2 2 2 2 SART-1 family EURL PF06937.11 BAM41844.1 - 0.054 12.9 1.9 0.045 13.2 0.5 1.5 2 0 0 2 2 2 0 EURL protein CLAMP PF14769.6 BAM41844.1 - 0.36 11.3 2.6 2.3 8.7 0.4 3.0 3 1 0 3 3 3 0 Flagellar C1a complex subunit C1a-32 Sel1 PF08238.12 BAM41845.1 - 4e-17 62.3 12.5 0.00029 21.4 0.0 7.4 8 0 0 8 8 8 6 Sel1 repeat Hydrolase_4 PF12146.8 BAM41848.1 - 1.2e-05 24.7 0.0 9.7e-05 21.7 0.0 2.1 1 1 1 2 2 2 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 BAM41848.1 - 0.0056 17.3 0.0 0.0085 16.7 0.0 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family DUF818 PF05677.12 BAM41848.1 - 0.022 13.7 0.1 0.033 13.2 0.1 1.2 1 0 0 1 1 1 0 Chlamydia CHLPS protein (DUF818) Peptidase_S9 PF00326.21 BAM41848.1 - 0.036 13.5 0.0 1 8.8 0.0 2.4 2 1 0 2 2 2 0 Prolyl oligopeptidase family LIP PF03583.14 BAM41848.1 - 0.075 12.3 0.0 0.31 10.3 0.0 1.9 2 0 0 2 2 2 0 Secretory lipase Cation_efflux PF01545.21 BAM41849.1 - 0.00079 19.2 0.5 0.00091 19.0 0.5 1.0 1 0 0 1 1 1 1 Cation efflux family DUF872 PF05915.12 BAM41849.1 - 0.0074 16.5 0.1 0.0084 16.3 0.1 1.1 1 0 0 1 1 1 1 Eukaryotic protein of unknown function (DUF872) CD34_antigen PF06365.12 BAM41849.1 - 3.7 7.1 5.5 2.2 7.8 0.4 2.0 1 1 1 2 2 2 0 CD34/Podocalyxin family His_Phos_1 PF00300.22 BAM41850.1 - 1.8e-34 119.1 0.0 2.6e-28 99.0 0.0 2.0 1 1 1 2 2 2 2 Histidine phosphatase superfamily (branch 1) Acetyltransf_1 PF00583.25 BAM41851.1 - 2.6e-09 37.3 0.0 4.8e-09 36.5 0.0 1.5 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 BAM41851.1 - 0.0012 18.8 0.1 0.0023 17.9 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 BAM41851.1 - 0.0023 18.1 0.3 0.004 17.3 0.3 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 BAM41851.1 - 0.0036 17.7 0.1 0.0097 16.3 0.0 1.7 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain PP2C PF00481.21 BAM41851.1 - 0.061 12.9 0.1 0.18 11.4 0.0 1.7 2 1 0 2 2 2 0 Protein phosphatase 2C DnaJ PF00226.31 BAM41852.1 - 9.9e-22 76.8 1.5 9.9e-22 76.8 1.5 1.8 2 0 0 2 2 2 1 DnaJ domain Thioredoxin PF00085.20 BAM41852.1 - 2.1e-06 27.6 0.3 2.6e-05 24.1 0.4 2.3 2 0 0 2 2 2 1 Thioredoxin Thioredoxin_6 PF13848.6 BAM41852.1 - 1.7e-05 24.8 7.3 0.01 15.7 1.2 3.5 2 1 0 3 3 3 2 Thioredoxin-like domain TPR_1 PF00515.28 BAM41853.1 - 0.015 15.1 3.0 9.6 6.2 0.0 4.0 4 1 0 4 4 4 0 Tetratricopeptide repeat Hep_59 PF07052.11 BAM41853.1 - 0.035 14.9 0.5 0.063 14.0 0.5 1.3 1 0 0 1 1 1 0 Hepatocellular carcinoma-associated antigen 59 CcdA PF07362.12 BAM41853.1 - 0.1 13.0 0.1 0.26 11.7 0.1 1.7 1 0 0 1 1 1 0 Post-segregation antitoxin CcdA DUF5363 PF17320.2 BAM41853.1 - 0.19 11.6 4.0 8.7 6.3 0.5 3.2 3 0 0 3 3 3 0 Family of unknown function (DUF5363) AF0941-like PF14591.6 BAM41854.1 - 0.1 13.2 2.2 0.12 13.0 0.5 2.0 2 0 0 2 2 2 0 AF0941-like UPF0203 PF05254.12 BAM41855.1 - 3.8e-05 23.9 1.1 6.6e-05 23.1 1.1 1.4 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0203) CX9C PF16860.5 BAM41855.1 - 0.013 15.5 3.0 0.29 11.2 0.2 2.3 2 0 0 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, CHCH PF06747.13 BAM41855.1 - 0.025 14.7 3.6 4.3 7.6 0.5 2.5 2 0 0 2 2 2 0 CHCH domain Cmc1 PF08583.10 BAM41855.1 - 0.057 13.4 2.5 0.44 10.6 0.2 2.2 1 1 1 2 2 2 0 Cytochrome c oxidase biogenesis protein Cmc1 like MCM_N PF14551.6 BAM41855.1 - 0.071 13.7 0.2 0.11 13.1 0.2 1.3 1 0 0 1 1 1 0 MCM N-terminal domain JHBP PF06585.11 BAM41855.1 - 0.15 11.2 1.3 0.29 10.3 0.2 1.8 1 1 1 2 2 2 0 Haemolymph juvenile hormone binding protein (JHBP) HSP70 PF00012.20 BAM41856.1 - 5.5e-243 807.6 11.3 6.4e-243 807.3 11.3 1.0 1 0 0 1 1 1 1 Hsp70 protein MreB_Mbl PF06723.13 BAM41856.1 - 3e-20 72.3 2.4 8.4e-20 70.8 0.8 2.1 2 0 0 2 2 2 1 MreB/Mbl protein FtsA PF14450.6 BAM41856.1 - 0.00021 21.7 6.6 1.9 8.9 0.8 4.0 3 1 0 3 3 3 3 Cell division protein FtsA FGGY_C PF02782.16 BAM41856.1 - 0.14 11.9 0.0 0.27 10.9 0.0 1.5 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, C-terminal domain GLE1 PF07817.13 BAM41856.1 - 0.27 10.4 4.0 0.42 9.8 0.0 2.7 3 0 0 3 3 3 0 GLE1-like protein Hydantoinase_A PF01968.18 BAM41856.1 - 0.34 10.1 7.1 0.65 9.2 0.2 2.9 4 0 0 4 4 4 0 Hydantoinase/oxoprolinase Pkinase PF00069.25 BAM41857.1 - 6.6e-65 219.1 0.2 9.9e-65 218.5 0.2 1.3 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM41857.1 - 5.9e-21 74.9 0.0 9.5e-21 74.2 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase APH PF01636.23 BAM41857.1 - 9.1e-07 29.0 0.0 7.7e-06 26.0 0.1 2.0 1 1 1 2 2 2 1 Phosphotransferase enzyme family Kinase-like PF14531.6 BAM41857.1 - 0.0022 17.4 0.0 0.0035 16.7 0.0 1.3 1 0 0 1 1 1 1 Kinase-like Pkinase_fungal PF17667.1 BAM41857.1 - 0.0035 16.2 0.0 0.009 14.8 0.0 1.6 2 0 0 2 2 2 1 Fungal protein kinase Kdo PF06293.14 BAM41857.1 - 0.015 14.6 0.2 0.027 13.8 0.2 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family CoA_binding PF02629.19 BAM41858.1 - 5.9e-22 78.2 0.3 3.4e-21 75.7 0.0 2.2 2 0 0 2 2 2 1 CoA binding domain Ligase_CoA PF00549.19 BAM41858.1 - 3.1e-19 69.3 0.2 4.9e-19 68.7 0.2 1.3 1 0 0 1 1 1 1 CoA-ligase Succ_CoA_lig PF13607.6 BAM41858.1 - 1.4e-06 28.2 0.0 2.2e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 BAM41858.1 - 0.032 14.7 0.0 0.092 13.2 0.0 1.8 1 0 0 1 1 1 0 CoA binding domain RtcB PF01139.17 BAM41859.1 - 4.4e-123 411.5 0.2 5.2e-123 411.3 0.2 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB Phage_TAC_12 PF12363.8 BAM41860.1 - 0.088 13.2 0.1 0.21 12.0 0.1 1.6 1 0 0 1 1 1 0 Phage tail assembly chaperone protein, TAC TIP49 PF06068.13 BAM41861.1 - 9.6e-148 492.0 0.2 1.2e-147 491.8 0.2 1.1 1 0 0 1 1 1 1 TIP49 P-loop domain TIP49_C PF17856.1 BAM41861.1 - 2.1e-21 75.8 0.0 5.5e-21 74.5 0.0 1.8 1 0 0 1 1 1 1 TIP49 AAA-lid domain AAA PF00004.29 BAM41861.1 - 3.6e-09 37.1 0.9 7e-06 26.5 0.1 3.2 3 0 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 BAM41861.1 - 1.2e-06 28.4 0.3 3.5e-05 23.6 0.0 2.4 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 BAM41861.1 - 8.4e-05 23.0 0.0 0.00016 22.1 0.0 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 BAM41861.1 - 9.1e-05 22.8 0.1 0.25 11.6 0.0 3.1 3 0 0 3 3 3 2 AAA domain Mg_chelatase PF01078.21 BAM41861.1 - 0.00047 19.6 0.2 0.0038 16.6 0.1 2.1 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_17 PF13207.6 BAM41861.1 - 0.00051 20.5 0.0 0.0025 18.2 0.0 2.2 1 1 1 2 2 2 1 AAA domain AAA_5 PF07728.14 BAM41861.1 - 0.0006 19.8 0.0 0.009 16.0 0.0 2.4 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) AAA_25 PF13481.6 BAM41861.1 - 0.00092 18.8 0.1 0.0016 18.1 0.1 1.3 1 0 0 1 1 1 1 AAA domain DnaB_C PF03796.15 BAM41861.1 - 0.0013 18.1 0.1 0.0021 17.4 0.1 1.3 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain ABC_tran PF00005.27 BAM41861.1 - 0.0019 18.7 0.1 0.0049 17.4 0.1 1.8 1 0 0 1 1 1 1 ABC transporter TsaE PF02367.17 BAM41861.1 - 0.0025 17.8 0.1 0.0054 16.7 0.1 1.5 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE NACHT PF05729.12 BAM41861.1 - 0.0035 17.3 0.0 0.0062 16.5 0.0 1.4 1 0 0 1 1 1 1 NACHT domain AAA_33 PF13671.6 BAM41861.1 - 0.0087 16.2 0.0 0.017 15.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_14 PF13173.6 BAM41861.1 - 0.01 15.9 0.0 0.33 11.0 0.0 2.4 2 0 0 2 2 2 0 AAA domain AAA_2 PF07724.14 BAM41861.1 - 0.017 15.3 0.1 0.21 11.7 0.0 2.4 2 0 0 2 2 2 0 AAA domain (Cdc48 subfamily) AAA_7 PF12775.7 BAM41861.1 - 0.019 14.5 0.1 0.052 13.1 0.1 1.7 1 0 0 1 1 1 0 P-loop containing dynein motor region ResIII PF04851.15 BAM41861.1 - 0.021 14.8 0.3 0.11 12.5 0.2 2.1 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit Zeta_toxin PF06414.12 BAM41861.1 - 0.026 13.8 0.1 0.049 12.9 0.1 1.5 1 0 0 1 1 1 0 Zeta toxin RNA_helicase PF00910.22 BAM41861.1 - 0.028 14.8 0.0 0.07 13.5 0.0 1.7 1 0 0 1 1 1 0 RNA helicase IstB_IS21 PF01695.17 BAM41861.1 - 0.033 13.9 0.0 0.065 13.0 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein Sigma54_activat PF00158.26 BAM41861.1 - 0.04 13.6 0.6 0.59 9.8 0.0 2.5 3 0 0 3 3 2 0 Sigma-54 interaction domain AAA_19 PF13245.6 BAM41861.1 - 0.074 13.4 1.1 0.69 10.2 1.1 2.4 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 BAM41861.1 - 0.076 12.8 0.2 0.2 11.4 0.2 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain APS_kinase PF01583.20 BAM41861.1 - 0.1 12.5 0.1 0.28 11.1 0.1 1.8 1 0 0 1 1 1 0 Adenylylsulphate kinase DNA_pol3_delta2 PF13177.6 BAM41861.1 - 0.1 12.3 0.0 0.34 10.7 0.0 2.0 1 1 0 1 1 1 0 DNA polymerase III, delta subunit Rad17 PF03215.15 BAM41861.1 - 0.11 12.4 0.1 0.34 10.8 0.0 1.8 2 0 0 2 2 1 0 Rad17 P-loop domain PhoH PF02562.16 BAM41861.1 - 0.14 11.6 0.1 0.36 10.3 0.1 1.7 1 0 0 1 1 1 0 PhoH-like protein Peptidase_C2 PF00648.21 BAM41862.1 - 3.2e-31 108.5 0.0 8.1e-31 107.1 0.0 1.6 1 1 0 1 1 1 1 Calpain family cysteine protease Calpain_III PF01067.22 BAM41862.1 - 0.00033 20.9 0.9 0.66 10.2 0.1 3.7 2 2 0 2 2 2 1 Calpain large subunit, domain III FAT PF02259.23 BAM41863.1 - 3.9e-10 39.5 7.3 3.9e-10 39.5 7.3 2.2 2 0 0 2 2 2 1 FAT domain DUF3887 PF13026.6 BAM41863.1 - 0.063 14.1 1.0 2.4 9.0 0.0 3.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3887) DUF1296 PF06972.11 BAM41863.1 - 0.096 12.8 0.1 0.46 10.7 0.1 2.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1296) WD40 PF00400.32 BAM41864.1 - 2.5e-42 142.1 23.9 2e-06 28.4 3.7 7.4 7 0 0 7 7 7 7 WD domain, G-beta repeat Nup160 PF11715.8 BAM41864.1 - 2.6e-06 26.4 3.7 0.18 10.4 0.2 3.5 1 1 2 3 3 3 3 Nucleoporin Nup120/160 ANAPC4_WD40 PF12894.7 BAM41864.1 - 3e-06 27.4 0.9 5.4 7.4 0.0 5.2 1 1 3 5 5 5 2 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 BAM41864.1 - 2.7e-05 23.7 0.1 0.083 12.2 0.0 3.1 1 1 2 3 3 3 2 WD40-like domain Nucleoporin_N PF08801.11 BAM41864.1 - 0.039 12.7 7.6 14 4.3 0.1 4.6 2 1 3 6 6 6 0 Nup133 N terminal like Hira PF07569.11 BAM41864.1 - 0.4 10.4 2.8 3 7.5 0.1 3.2 3 1 1 4 4 4 0 TUP1-like enhancer of split Tetraspanin PF00335.20 BAM41865.1 - 8.5e-05 22.4 4.3 0.00011 22.0 4.3 1.2 1 0 0 1 1 1 1 Tetraspanin family CD20 PF04103.15 BAM41865.1 - 0.046 13.8 6.6 0.088 12.9 6.6 1.6 1 1 0 1 1 1 0 CD20-like family SLATT_5 PF18160.1 BAM41865.1 - 2.1 7.6 7.8 3.4 6.9 0.3 2.5 3 0 0 3 3 3 0 SMODS and SLOG-associating 2TM effector domain family 5 Rab5ip PF07019.12 BAM41866.1 - 1.2e-09 38.6 5.8 1.5e-09 38.3 5.8 1.1 1 0 0 1 1 1 1 Rab5-interacting protein (Rab5ip) KH_1 PF00013.29 BAM41867.1 - 3.1e-11 42.9 0.0 2.3e-06 27.3 0.1 2.5 2 0 0 2 2 2 2 KH domain Ses_B PF17046.5 BAM41867.1 - 0.014 15.3 0.4 2 8.4 0.4 2.7 2 0 0 2 2 2 0 SesB domain on fungal death-pathway protein MALT1_Ig PF18703.1 BAM41867.1 - 0.038 14.0 1.7 0.06 13.4 0.2 2.1 2 1 0 2 2 2 0 MALT1 Ig-like domain DUF1682 PF07946.14 BAM41868.1 - 4e-28 98.6 11.8 1.2e-15 57.5 0.1 2.7 1 1 2 3 3 3 2 Protein of unknown function (DUF1682) HCNGP PF07818.13 BAM41868.1 - 2.4e-13 50.5 0.2 2.4e-13 50.5 0.2 2.1 2 0 0 2 2 2 1 HCNGP-like protein zf-rbx1 PF12678.7 BAM41869.1 - 8.1e-25 86.9 11.8 1.2e-24 86.4 11.8 1.2 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-ANAPC11 PF12861.7 BAM41869.1 - 6.1e-15 55.1 13.1 2.2e-14 53.3 13.1 1.7 1 1 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_2 PF13639.6 BAM41869.1 - 3.9e-06 27.1 14.7 7.1e-06 26.3 8.8 2.4 1 1 1 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 BAM41869.1 - 6e-05 22.8 2.6 6e-05 22.8 2.6 2.3 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 BAM41869.1 - 0.0017 18.0 1.3 0.0017 18.0 1.3 2.4 2 0 0 2 2 2 1 RING-like zinc finger zf-C3HC4 PF00097.25 BAM41869.1 - 0.0019 18.0 11.1 0.026 14.4 11.1 2.3 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 BAM41869.1 - 0.021 15.0 0.4 0.021 15.0 0.4 2.4 2 1 0 2 2 2 0 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 BAM41869.1 - 0.042 13.9 9.1 0.23 11.5 9.1 2.2 1 1 0 1 1 1 0 RING-type zinc-finger Zn_ribbon_17 PF17120.5 BAM41869.1 - 0.051 13.2 3.8 0.051 13.2 3.8 2.3 2 0 0 2 2 2 0 Zinc-ribbon, C4HC2 type zinc_ribbon_16 PF17034.5 BAM41869.1 - 0.2 11.9 8.1 0.52 10.5 8.1 1.8 1 1 0 1 1 1 0 Zinc-ribbon like family FANCL_C PF11793.8 BAM41869.1 - 0.23 11.7 8.3 2 8.7 8.5 2.1 1 1 1 2 2 2 0 FANCL C-terminal domain zf-C3HC4_3 PF13920.6 BAM41869.1 - 0.35 10.8 10.8 3.4 7.6 4.8 2.7 1 1 1 2 2 2 0 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 BAM41869.1 - 0.66 10.0 12.3 6.8 6.8 12.4 2.5 1 1 1 2 2 2 0 zinc-RING finger domain ANAPC4_WD40 PF12894.7 BAM41870.1 - 2.4e-07 31.0 0.0 5.4 7.4 0.0 5.0 3 1 2 5 5 5 4 Anaphase-promoting complex subunit 4 WD40 domain WD40 PF00400.32 BAM41870.1 - 5.5e-07 30.2 2.6 0.07 14.0 0.0 5.5 6 0 0 6 6 6 2 WD domain, G-beta repeat Coatomer_WDAD PF04053.14 BAM41870.1 - 0.14 11.1 0.0 8.6 5.3 0.0 2.1 1 1 0 2 2 2 0 Coatomer WD associated region EF-hand_1 PF00036.32 BAM41872.1 - 1.1e-05 24.6 0.0 6.5e-05 22.2 0.0 2.4 2 0 0 2 2 2 1 EF hand RAP PF08373.10 BAM41872.1 - 1.3e-05 25.2 0.5 0.00031 20.8 0.1 2.7 2 0 0 2 2 2 1 RAP domain EF-hand_6 PF13405.6 BAM41872.1 - 1.4e-05 24.7 2.7 2.8e-05 23.7 0.0 3.1 4 0 0 4 4 4 1 EF-hand domain EF-hand_7 PF13499.6 BAM41872.1 - 0.00074 19.9 3.3 0.0032 17.9 0.4 3.7 4 1 0 4 4 4 1 EF-hand domain pair DUF3887 PF13026.6 BAM41872.1 - 0.015 16.1 1.4 4.7 8.1 0.0 4.5 5 0 0 5 5 5 0 Protein of unknown function (DUF3887) EF-hand_9 PF14658.6 BAM41872.1 - 0.041 14.2 0.0 0.11 12.8 0.0 1.8 1 0 0 1 1 1 0 EF-hand domain FAST_1 PF06743.15 BAM41872.1 - 0.083 12.9 1.2 3.7 7.6 0.2 2.9 2 0 0 2 2 2 0 FAST kinase-like protein, subdomain 1 EF-hand_14 PF17959.1 BAM41872.1 - 0.15 12.4 0.8 0.97 9.8 0.0 2.8 3 0 0 3 3 3 0 EF-hand domain TIM PF00121.18 BAM41873.1 - 3.8e-48 164.0 0.0 5.4e-48 163.5 0.0 1.2 1 0 0 1 1 1 1 Triosephosphate isomerase CENP-T_C PF15511.6 BAM41873.1 - 2e-08 34.3 0.1 5.5e-08 32.9 0.0 1.7 2 0 0 2 2 2 1 Centromere kinetochore component CENP-T histone fold CENP-S PF15630.6 BAM41873.1 - 0.00031 21.1 0.3 0.0014 19.0 0.0 2.1 2 0 0 2 2 2 1 CENP-S protein TAF PF02969.17 BAM41873.1 - 0.006 16.7 0.0 0.011 15.9 0.0 1.4 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) FlpD PF02662.16 BAM41873.1 - 0.012 15.6 0.1 1.5 8.9 0.1 3.1 3 0 0 3 3 3 0 Methyl-viologen-reducing hydrogenase, delta subunit CBFD_NFYB_HMF PF00808.23 BAM41873.1 - 0.016 15.5 0.0 0.039 14.3 0.0 1.7 1 0 0 1 1 1 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 BAM41873.1 - 0.087 13.2 0.0 0.19 12.1 0.0 1.6 1 0 0 1 1 1 0 Core histone H2A/H2B/H3/H4 Dus PF01207.17 BAM41873.1 - 0.14 11.2 0.1 0.37 9.8 0.0 1.7 2 0 0 2 2 2 0 Dihydrouridine synthase (Dus) CENP-T_C PF15511.6 BAM41874.1 - 2.2e-09 37.4 0.1 2.6e-09 37.2 0.1 1.2 1 0 0 1 1 1 1 Centromere kinetochore component CENP-T histone fold CENP-S PF15630.6 BAM41874.1 - 6.6e-05 23.2 0.1 9.7e-05 22.7 0.1 1.3 1 1 0 1 1 1 1 CENP-S protein TAF PF02969.17 BAM41874.1 - 0.00049 20.2 0.0 0.00065 19.8 0.0 1.3 1 0 0 1 1 1 1 TATA box binding protein associated factor (TAF) CBFD_NFYB_HMF PF00808.23 BAM41874.1 - 0.0017 18.6 0.0 0.0025 18.1 0.0 1.4 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 BAM41874.1 - 0.012 16.0 0.1 0.012 15.9 0.1 1.3 1 1 0 1 1 1 0 Core histone H2A/H2B/H3/H4 Bromo_TP PF07524.13 BAM41874.1 - 0.034 14.1 0.0 0.04 13.9 0.0 1.2 1 0 0 1 1 1 0 Bromodomain associated TFIID-31kDa PF02291.15 BAM41874.1 - 0.039 14.0 0.0 0.045 13.8 0.0 1.1 1 0 0 1 1 1 0 Transcription initiation factor IID, 31kD subunit TAFII28 PF04719.14 BAM41874.1 - 0.11 12.5 0.1 0.14 12.3 0.1 1.2 1 0 0 1 1 1 0 hTAFII28-like protein conserved region Pkinase PF00069.25 BAM41875.1 - 2.5e-45 154.9 0.0 3.4e-45 154.5 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM41875.1 - 9e-16 57.9 0.0 1.5e-15 57.2 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Pkinase_fungal PF17667.1 BAM41875.1 - 1.4e-08 34.0 0.0 3.4e-08 32.7 0.0 1.5 1 0 0 1 1 1 1 Fungal protein kinase Kdo PF06293.14 BAM41875.1 - 1.4e-06 27.8 0.0 2.4e-06 27.1 0.0 1.3 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 BAM41875.1 - 0.0011 19.0 0.0 0.01 15.8 0.0 2.1 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pox_ser-thr_kin PF05445.11 BAM41875.1 - 0.08 11.9 0.1 0.13 11.2 0.1 1.2 1 0 0 1 1 1 0 Poxvirus serine/threonine protein kinase Kinase-like PF14531.6 BAM41875.1 - 0.14 11.5 0.0 5.5 6.2 0.0 2.2 2 0 0 2 2 2 0 Kinase-like EF-hand_8 PF13833.6 BAM41876.1 - 1.1e-11 44.4 4.5 0.00018 21.3 0.0 3.8 3 1 0 3 3 3 3 EF-hand domain pair EF-hand_6 PF13405.6 BAM41876.1 - 6.2e-11 41.3 5.2 1.4e-06 27.8 0.2 3.8 4 0 0 4 4 4 2 EF-hand domain EF-hand_7 PF13499.6 BAM41876.1 - 1.7e-10 41.2 4.9 0.00015 22.1 1.7 2.8 2 1 1 3 3 3 3 EF-hand domain pair EF-hand_1 PF00036.32 BAM41876.1 - 8.8e-09 34.3 10.5 2e-06 27.0 0.4 4.5 5 0 0 5 5 5 2 EF hand EF-hand_13 PF17958.1 BAM41876.1 - 0.0049 16.7 0.2 0.21 11.4 0.0 3.0 2 1 1 3 3 3 1 EF-hand domain EF-hand_5 PF13202.6 BAM41876.1 - 2.1 8.0 5.0 0.85 9.2 0.3 2.9 3 0 0 3 3 3 0 EF hand Ribosomal_S4e PF00900.20 BAM41877.1 - 1.9e-29 101.4 0.7 2.9e-29 100.8 0.1 1.7 2 0 0 2 2 2 1 Ribosomal family S4e 40S_S4_C PF16121.5 BAM41877.1 - 9.1e-21 73.3 0.1 1.5e-20 72.6 0.1 1.4 1 0 0 1 1 1 1 40S ribosomal protein S4 C-terminus RS4NT PF08071.12 BAM41877.1 - 6.4e-19 67.8 6.5 6.4e-19 67.8 6.5 2.0 2 0 0 2 2 2 1 RS4NT (NUC023) domain KOW PF00467.29 BAM41877.1 - 4.3e-07 29.7 4.9 5.6e-07 29.3 2.2 2.6 3 0 0 3 3 3 1 KOW motif S4 PF01479.25 BAM41877.1 - 1.4e-05 24.7 0.1 2.7e-05 23.8 0.1 1.5 1 0 0 1 1 1 1 S4 domain MRP-S32 PF10210.9 BAM41877.1 - 0.051 14.1 0.0 0.54 10.8 0.0 2.2 2 0 0 2 2 2 0 Mitochondrial 28S ribosomal protein S32 DUF4056 PF13265.6 BAM41877.1 - 0.071 12.4 0.0 0.14 11.5 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF4056) EF-hand_7 PF13499.6 BAM41878.1 - 8e-26 90.3 10.6 4.8e-12 46.2 0.3 3.6 3 1 0 3 3 3 3 EF-hand domain pair EF-hand_5 PF13202.6 BAM41878.1 - 1e-25 88.0 16.4 2.7e-05 23.4 0.4 5.5 5 0 0 5 5 5 5 EF hand EF-hand_1 PF00036.32 BAM41878.1 - 8.1e-25 84.5 19.6 0.00012 21.3 0.2 5.7 6 0 0 6 6 6 5 EF hand EF-hand_6 PF13405.6 BAM41878.1 - 9.9e-24 81.2 13.8 7.1e-05 22.4 0.9 5.6 5 0 0 5 5 5 5 EF-hand domain EF-hand_8 PF13833.6 BAM41878.1 - 4.6e-14 52.0 11.6 0.00018 21.2 0.1 5.2 4 1 1 5 5 5 5 EF-hand domain pair SPARC_Ca_bdg PF10591.9 BAM41878.1 - 8.4e-11 42.2 4.3 0.0017 18.6 0.0 3.4 2 1 1 3 3 3 3 Secreted protein acidic and rich in cysteine Ca binding region EF-hand_4 PF12763.7 BAM41878.1 - 0.1 12.6 5.3 15 5.6 0.3 3.7 2 2 1 3 3 3 0 Cytoskeletal-regulatory complex EF hand Herpes_LMP1 PF05297.11 BAM41879.1 - 9.5 5.3 11.4 0.25 10.5 2.8 2.1 2 0 0 2 2 2 0 Herpesvirus latent membrane protein 1 (LMP1) DUF4768 PF15989.5 BAM41881.1 - 0.11 12.4 0.6 0.23 11.4 0.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4768) NDUF_C2 PF06374.11 BAM41882.1 - 0.12 12.5 0.4 4.4 7.5 0.2 2.5 2 0 0 2 2 2 0 NADH-ubiquinone oxidoreductase subunit b14.5b (NDUFC2) DUF2607 PF10795.9 BAM41883.1 - 0.094 12.9 2.1 0.15 12.2 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2607) ABC_ATPase PF09818.9 BAM41885.1 - 6.2e-174 579.0 0.0 1.2e-173 578.1 0.0 1.4 2 0 0 2 2 2 1 Predicted ATPase of the ABC class AAA_23 PF13476.6 BAM41885.1 - 0.00051 20.6 0.0 0.001 19.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_25 PF13481.6 BAM41885.1 - 0.028 14.0 0.0 0.048 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain Connexin PF00029.19 BAM41887.1 - 0.0056 16.5 0.0 0.014 15.1 0.0 1.7 1 0 0 1 1 1 1 Connexin Helicase_C PF00271.31 BAM41890.1 - 5e-15 55.8 0.0 1.3e-14 54.4 0.0 1.7 1 0 0 1 1 1 1 Helicase conserved C-terminal domain DEAD PF00270.29 BAM41890.1 - 3.1e-12 46.6 0.0 2.6e-09 37.1 0.0 2.9 3 0 0 3 3 3 2 DEAD/DEAH box helicase AAA_11 PF13086.6 BAM41890.1 - 0.0011 18.8 0.1 0.12 12.2 0.0 2.6 2 0 0 2 2 2 2 AAA domain DUF4768 PF15989.5 BAM41892.1 - 0.04 13.9 0.2 0.095 12.7 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4768) Herpes_LMP1 PF05297.11 BAM41892.1 - 0.44 9.7 7.0 0.29 10.3 1.8 2.4 2 0 0 2 2 2 0 Herpesvirus latent membrane protein 1 (LMP1) DUF2913 PF11140.8 BAM41894.1 - 0.0076 16.0 0.4 0.02 14.7 0.4 1.7 1 0 0 1 1 1 1 Protein of unknown function (DUF2913) YlbE PF14003.6 BAM41894.1 - 0.15 12.5 2.5 0.18 12.2 0.4 2.4 2 0 0 2 2 2 0 YlbE-like protein Cyc-maltodext_C PF10438.9 BAM41894.1 - 1.9 8.7 10.7 0.36 11.0 1.5 3.3 3 0 0 3 3 3 0 Cyclo-malto-dextrinase C-terminal domain ABC_tran PF00005.27 BAM41895.1 - 4.2e-33 114.8 0.0 8.3e-18 65.2 0.0 2.6 2 0 0 2 2 2 2 ABC transporter RsgA_GTPase PF03193.16 BAM41895.1 - 3.5e-07 30.3 0.1 0.0034 17.3 0.0 2.4 2 0 0 2 2 2 2 RsgA GTPase Zeta_toxin PF06414.12 BAM41895.1 - 2.3e-05 23.8 0.3 0.14 11.5 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin AAA_16 PF13191.6 BAM41895.1 - 2.8e-05 24.5 0.0 0.083 13.3 0.0 2.4 2 0 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 BAM41895.1 - 3e-05 23.7 0.6 0.08 12.7 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain MeaB PF03308.16 BAM41895.1 - 0.00032 19.8 0.1 0.046 12.7 0.1 2.2 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_22 PF13401.6 BAM41895.1 - 0.00081 19.7 0.4 1.2 9.4 0.0 3.7 4 0 0 4 4 4 1 AAA domain AAA_30 PF13604.6 BAM41895.1 - 0.0016 18.2 0.4 0.15 11.8 0.0 2.2 2 0 0 2 2 2 1 AAA domain AAA_21 PF13304.6 BAM41895.1 - 0.0027 17.5 3.7 1.4 8.7 0.0 3.5 4 0 0 4 4 3 2 AAA domain, putative AbiEii toxin, Type IV TA system cobW PF02492.19 BAM41895.1 - 0.0033 17.1 1.5 1.4 8.5 0.1 2.3 2 0 0 2 2 2 2 CobW/HypB/UreG, nucleotide-binding domain AAA_23 PF13476.6 BAM41895.1 - 0.0046 17.5 0.5 4.6 7.7 0.1 2.9 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 BAM41895.1 - 0.0058 16.6 1.0 4.2 7.3 0.0 3.3 3 0 0 3 3 3 1 NACHT domain T2SSE PF00437.20 BAM41895.1 - 0.017 14.2 0.6 1.8 7.6 0.1 2.2 2 0 0 2 2 2 0 Type II/IV secretion system protein SMC_N PF02463.19 BAM41895.1 - 0.019 14.4 1.0 0.083 12.3 0.1 2.4 2 1 0 3 3 3 0 RecF/RecN/SMC N terminal domain MMR_HSR1 PF01926.23 BAM41895.1 - 0.02 15.0 0.6 2.7 8.1 0.1 3.0 3 0 0 3 3 2 0 50S ribosome-binding GTPase AAA_33 PF13671.6 BAM41895.1 - 0.028 14.6 0.1 2.3 8.4 0.0 2.4 2 0 0 2 2 2 0 AAA domain ATP_bind_1 PF03029.17 BAM41895.1 - 0.039 13.7 1.0 8.7 6.0 0.1 2.5 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_18 PF13238.6 BAM41895.1 - 0.046 14.3 0.1 4.9 7.7 0.0 2.7 2 0 0 2 2 2 0 AAA domain TrwB_AAD_bind PF10412.9 BAM41895.1 - 0.047 12.6 0.8 5.1 5.9 0.1 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain NB-ARC PF00931.22 BAM41895.1 - 0.055 12.6 1.5 2.8 7.0 0.1 2.7 3 0 0 3 3 3 0 NB-ARC domain TsaE PF02367.17 BAM41895.1 - 0.092 12.7 0.1 6.8 6.7 0.0 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF815 PF05673.13 BAM41895.1 - 0.12 11.5 0.3 2.2 7.4 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF815) SRP54 PF00448.22 BAM41895.1 - 0.13 11.9 0.5 0.31 10.6 0.1 1.9 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_7 PF12775.7 BAM41895.1 - 0.13 11.8 3.2 10 5.6 0.1 3.4 4 0 0 4 4 3 0 P-loop containing dynein motor region AAA_19 PF13245.6 BAM41895.1 - 0.28 11.5 0.9 20 5.5 0.1 2.4 2 0 0 2 2 2 0 AAA domain Dynamin_N PF00350.23 BAM41895.1 - 0.47 10.5 2.4 1.7 8.7 0.7 2.6 2 0 0 2 2 2 0 Dynamin family Afaf PF15339.6 BAM41895.1 - 0.49 10.1 3.7 0.55 9.9 0.6 2.8 2 0 0 2 2 2 0 Acrosome formation-associated factor DUF87 PF01935.17 BAM41895.1 - 1.2 9.1 7.8 3.9 7.5 0.2 3.1 3 0 0 3 3 3 0 Helicase HerA, central domain IL1 PF00340.19 BAM41896.1 - 0.0021 17.7 0.0 0.0063 16.2 0.0 1.8 1 0 0 1 1 1 1 Interleukin-1 / 18 zf-AN1 PF01428.16 BAM41897.1 - 2.4e-10 40.4 7.3 4.1e-10 39.6 7.3 1.3 1 0 0 1 1 1 1 AN1-like Zinc finger DUF2083 PF09856.9 BAM41897.1 - 0.03 14.2 0.3 0.03 14.2 0.3 1.1 1 0 0 1 1 1 0 Predicted transcriptional regulator (DUF2083) DUF445 PF04286.12 BAM41899.1 - 0.045 13.5 3.2 0.064 13.1 3.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF445) DUF1350 PF07082.11 BAM41899.1 - 0.15 11.4 0.0 0.2 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1350) DUF668 PF05003.12 BAM41899.1 - 0.34 11.4 2.7 13 6.4 0.0 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF668) TFIIS_M PF07500.14 BAM41899.1 - 6.2 7.3 9.6 3.5 8.1 3.1 2.2 1 1 1 2 2 2 0 Transcription factor S-II (TFIIS), central domain Fib_alpha PF08702.10 BAM41899.1 - 8.3 6.6 8.7 13 5.9 7.1 1.9 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Endopep_inhib PF16800.5 BAM41900.1 - 0.02 14.8 7.5 0.61 10.0 0.3 2.6 1 1 1 2 2 2 0 IseA DL-endopeptidase inhibitor Tweety PF04906.13 BAM41900.1 - 0.053 12.2 0.7 1.4 7.5 0.6 2.2 2 0 0 2 2 2 0 Tweety FadR_C PF07840.12 BAM41900.1 - 0.095 12.6 4.1 0.13 12.1 3.1 1.9 1 1 0 1 1 1 0 FadR C-terminal domain DUF5347 PF17282.2 BAM41900.1 - 0.12 12.7 0.1 0.12 12.7 0.1 2.4 2 1 1 3 3 3 0 Family of unknown function (DUF5347) Ribosomal_S15 PF00312.22 BAM41901.1 - 6.5e-21 74.3 3.3 6.5e-21 74.3 3.3 2.1 2 0 0 2 2 2 1 Ribosomal protein S15 Rota_NSP3 PF01665.16 BAM41901.1 - 0.0088 15.2 0.0 0.014 14.5 0.0 1.3 1 0 0 1 1 1 1 Rotavirus non-structural protein NSP3 Fibrillarin PF01269.17 BAM41901.1 - 0.064 12.4 0.1 4.5 6.3 0.0 2.1 2 0 0 2 2 2 0 Fibrillarin Gpi16 PF04113.14 BAM41902.1 - 5.3e-15 54.9 0.6 5.2e-09 35.1 0.1 3.0 2 1 1 3 3 3 3 Gpi16 subunit, GPI transamidase component RNA_pol_Rpb1_5 PF04998.17 BAM41903.1 - 6.7e-86 288.0 1.0 1.2e-85 287.2 1.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb1_1 PF04997.12 BAM41903.1 - 4.2e-73 246.4 1.6 4.2e-73 246.4 1.6 2.1 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 BAM41903.1 - 1e-68 230.8 0.0 2.8e-68 229.3 0.0 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_4 PF05000.17 BAM41903.1 - 1.3e-29 102.3 0.1 7.7e-29 99.8 0.0 2.4 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_3 PF04983.18 BAM41903.1 - 5.2e-29 101.2 0.0 3.3e-28 98.6 0.0 2.4 2 1 0 2 2 2 1 RNA polymerase Rpb1, domain 3 COLFI PF01410.18 BAM41904.1 - 0.0049 16.2 0.3 0.009 15.3 0.3 1.4 1 0 0 1 1 1 1 Fibrillar collagen C-terminal domain HSP90 PF00183.18 BAM41905.1 - 4.4e-143 477.9 2.0 1.2e-141 473.2 0.1 2.7 2 1 0 2 2 2 1 Hsp90 protein HATPase_c_3 PF13589.6 BAM41905.1 - 8.7e-12 45.0 0.1 3e-11 43.3 0.1 2.0 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c PF02518.26 BAM41905.1 - 2.8e-08 34.2 0.0 1.3e-07 32.1 0.0 2.1 2 0 0 2 2 2 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase Pkinase PF00069.25 BAM41906.1 - 5.6e-38 130.8 0.1 2.8e-20 72.8 0.0 2.9 2 1 0 2 2 2 2 Protein kinase domain Pkinase_Tyr PF07714.17 BAM41906.1 - 1.3e-10 41.1 0.0 0.00043 19.7 0.0 3.3 2 1 0 2 2 2 2 Protein tyrosine kinase Prothymosin PF03247.14 BAM41906.1 - 3.6 8.1 21.9 2.6 8.5 10.9 2.5 2 0 0 2 2 2 0 Prothymosin/parathymosin family Ras PF00071.22 BAM41907.1 - 2.5e-59 199.5 0.3 3.1e-59 199.2 0.3 1.1 1 0 0 1 1 1 1 Ras family Roc PF08477.13 BAM41907.1 - 1e-35 122.6 0.6 1.5e-35 122.0 0.1 1.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 BAM41907.1 - 9.3e-17 61.0 0.1 1.3e-16 60.5 0.1 1.1 1 0 0 1 1 1 1 ADP-ribosylation factor family MMR_HSR1 PF01926.23 BAM41907.1 - 3.9e-06 26.9 0.1 1.5e-05 25.0 0.0 1.8 1 1 0 2 2 2 1 50S ribosome-binding GTPase Gtr1_RagA PF04670.12 BAM41907.1 - 9.5e-06 25.1 0.2 1.2e-05 24.8 0.2 1.2 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region RsgA_GTPase PF03193.16 BAM41907.1 - 8.6e-05 22.5 0.1 0.088 12.7 0.0 2.4 2 1 1 3 3 3 2 RsgA GTPase GTP_EFTU PF00009.27 BAM41907.1 - 0.00025 20.6 0.3 0.00073 19.1 0.3 1.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain SRPRB PF09439.10 BAM41907.1 - 0.00094 18.7 0.0 0.0014 18.1 0.0 1.3 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit FeoB_N PF02421.18 BAM41907.1 - 0.014 14.9 0.2 0.19 11.3 0.2 2.3 1 1 0 1 1 1 0 Ferrous iron transport protein B AAA_16 PF13191.6 BAM41907.1 - 0.044 14.2 0.0 0.055 13.8 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 BAM41907.1 - 0.053 13.8 0.0 0.1 12.8 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 BAM41907.1 - 0.12 12.4 0.0 0.28 11.2 0.0 1.8 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) ABC_tran PF00005.27 BAM41907.1 - 0.14 12.6 0.1 0.29 11.7 0.1 1.8 1 1 0 1 1 1 0 ABC transporter GATA PF00320.27 BAM41908.1 - 1.1e-06 28.2 2.8 1.1e-06 28.2 2.8 1.9 2 0 0 2 2 2 1 GATA zinc finger ArfGap PF01412.18 BAM41908.1 - 0.063 13.3 0.3 0.063 13.3 0.3 2.2 2 0 0 2 2 2 0 Putative GTPase activating protein for Arf DIM1 PF02966.16 BAM41909.1 - 0.0051 16.6 0.6 0.15 11.9 0.0 3.1 3 0 0 3 3 3 1 Mitosis protein DIM1 PIG-P PF08510.12 BAM41910.1 - 8.8e-22 77.3 5.8 1.7e-21 76.4 5.8 1.4 1 1 0 1 1 1 1 PIG-P DPM2 PF07297.12 BAM41910.1 - 3.6 8.0 9.8 8.3 6.8 9.8 1.6 1 1 0 1 1 1 0 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) Sec1 PF00995.23 BAM41911.1 - 1.7e-69 235.6 1.4 2.3e-69 235.2 1.4 1.1 1 0 0 1 1 1 1 Sec1 family Glyphos_transf PF04464.14 BAM41911.1 - 0.00026 20.1 0.0 0.00044 19.3 0.0 1.3 1 0 0 1 1 1 1 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DUF4268 PF14088.6 BAM41912.1 - 0.017 15.0 0.1 0.018 14.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4268) D123 PF07065.14 BAM41913.1 - 1.2e-34 119.9 3.1 1.6e-34 119.5 3.1 1.2 1 0 0 1 1 1 1 D123 Fe-S_biosyn PF01521.20 BAM41914.1 - 1.8e-12 47.4 0.1 2.4e-12 47.0 0.1 1.1 1 0 0 1 1 1 1 Iron-sulphur cluster biosynthesis PAN_4 PF14295.6 BAM41914.1 - 0.0039 17.1 1.5 1.4 8.9 0.0 3.0 3 0 0 3 3 3 2 PAN domain hSH3 PF14603.6 BAM41914.1 - 0.044 14.2 1.7 0.087 13.3 1.7 1.6 1 1 0 1 1 1 0 Helically-extended SH3 domain OPA3 PF07047.12 BAM41916.1 - 6.2e-06 26.0 0.1 9.2e-06 25.4 0.1 1.3 1 1 0 1 1 1 1 Optic atrophy 3 protein (OPA3) Rad17 PF03215.15 BAM41918.1 - 1e-08 35.3 0.2 3.8e-08 33.5 0.0 2.1 2 0 0 2 2 2 1 Rad17 P-loop domain AAA PF00004.29 BAM41918.1 - 4.7e-05 23.8 0.0 0.00012 22.5 0.0 1.7 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) SLS PF14611.6 BAM41918.1 - 0.0015 18.4 0.1 0.0047 16.8 0.1 1.9 1 0 0 1 1 1 1 Mitochondrial inner-membrane-bound regulator dNK PF01712.19 BAM41918.1 - 0.0038 17.1 1.8 2 8.2 0.0 3.1 3 0 0 3 3 3 2 Deoxynucleoside kinase AAA_18 PF13238.6 BAM41918.1 - 0.0038 17.8 0.1 0.027 15.0 0.1 2.5 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAM41918.1 - 0.0081 16.6 0.0 0.016 15.6 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain RsgA_GTPase PF03193.16 BAM41918.1 - 0.0086 16.0 0.0 0.023 14.6 0.0 1.7 1 0 0 1 1 1 1 RsgA GTPase AAA_6 PF12774.7 BAM41918.1 - 0.009 15.0 0.0 0.023 13.7 0.0 1.6 1 0 0 1 1 1 1 Hydrolytic ATP binding site of dynein motor region AAA_14 PF13173.6 BAM41918.1 - 0.011 15.7 0.1 0.048 13.7 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_5 PF07728.14 BAM41918.1 - 0.017 15.1 0.0 0.11 12.5 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) TsaE PF02367.17 BAM41918.1 - 0.033 14.2 0.3 0.21 11.6 0.0 2.4 3 0 0 3 3 3 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE PAP2_C PF14360.6 BAM41919.1 - 2.1e-15 57.0 12.7 2.1e-15 57.0 12.7 2.9 3 0 0 3 3 3 1 PAP2 superfamily C-terminal PAP2 PF01569.21 BAM41919.1 - 1.2e-09 38.1 6.1 1.2e-09 38.1 6.1 2.1 1 1 1 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 BAM41919.1 - 0.00017 21.3 13.9 0.00037 20.2 13.9 1.7 1 1 0 1 1 1 1 PAP2 superfamily NepR PF18557.1 BAM41919.1 - 0.059 13.0 0.1 0.31 10.7 0.0 2.0 2 0 0 2 2 2 0 Anti-sigma factor NepR PAP2_C PF14360.6 BAM41920.1 - 1.5e-10 41.5 6.8 1.5e-10 41.5 6.8 2.2 2 0 0 2 2 2 1 PAP2 superfamily C-terminal PAP2 PF01569.21 BAM41920.1 - 0.00039 20.2 7.6 0.00096 18.9 7.6 1.6 1 0 0 1 1 1 1 PAP2 superfamily PAP2_3 PF14378.6 BAM41920.1 - 0.00094 18.9 4.1 0.00094 18.9 4.1 2.6 3 0 0 3 3 3 1 PAP2 superfamily PAP2_C PF14360.6 BAM41921.1 - 1.4e-16 60.8 14.9 1.4e-16 60.8 14.9 3.2 3 0 0 3 3 3 2 PAP2 superfamily C-terminal PAP2 PF01569.21 BAM41921.1 - 1.3e-08 34.7 14.1 2.1e-07 30.8 14.5 2.6 2 1 0 2 2 2 1 PAP2 superfamily Claudin_2 PF13903.6 BAM41921.1 - 0.22 11.2 7.2 0.059 13.1 0.4 2.4 2 0 0 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction PAP2_3 PF14378.6 BAM41921.1 - 1.2 8.8 22.7 0.042 13.5 16.2 1.9 2 1 0 2 2 2 0 PAP2 superfamily Mito_carr PF00153.27 BAM41922.1 - 0.0093 15.9 0.2 2.9 7.9 0.0 2.6 2 0 0 2 2 2 2 Mitochondrial carrier protein PA14 PF07691.12 BAM41924.1 - 1e-22 80.6 0.0 3.5e-22 78.8 0.0 2.0 1 0 0 1 1 1 1 PA14 domain fn2 PF00040.19 BAM41924.1 - 0.0011 19.1 1.1 0.0037 17.5 1.1 2.0 1 0 0 1 1 1 1 Fibronectin type II domain Rx_N PF18052.1 BAM41924.1 - 0.0074 16.5 0.8 0.013 15.7 0.1 1.8 2 0 0 2 2 2 1 Rx N-terminal domain Prefoldin_2 PF01920.20 BAM41924.1 - 0.013 15.5 6.3 0.038 13.9 6.3 1.8 1 0 0 1 1 1 0 Prefoldin subunit Cwf_Cwc_15 PF04889.12 BAM41924.1 - 1.4 8.6 10.3 0.82 9.4 3.5 2.3 2 0 0 2 2 2 0 Cwf15/Cwc15 cell cycle control protein Sigma70_ner PF04546.13 BAM41924.1 - 3.8 7.3 14.3 39 4.0 14.3 2.2 1 1 0 1 1 1 0 Sigma-70, non-essential region NUDIX_2 PF13869.6 BAM41925.1 - 8e-58 195.1 0.0 9.4e-58 194.9 0.0 1.0 1 0 0 1 1 1 1 Nucleotide hydrolase HARP PF07443.13 BAM41926.1 - 0.12 12.0 0.0 0.3 10.8 0.0 1.6 1 0 0 1 1 1 0 HepA-related protein (HARP) Acetyltransf_1 PF00583.25 BAM41927.1 - 1.5e-10 41.3 0.0 1.8e-10 41.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 BAM41927.1 - 6e-09 35.9 0.0 6.3e-09 35.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 BAM41927.1 - 4.1e-08 33.5 0.4 5.2e-08 33.2 0.4 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 BAM41927.1 - 0.00014 21.8 0.0 0.00022 21.1 0.0 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 BAM41927.1 - 0.028 14.6 0.0 0.061 13.5 0.0 1.7 1 1 0 1 1 1 0 GCN5-related N-acetyl-transferase TBCA PF02970.16 BAM41928.1 - 1.4e-13 51.0 2.4 2.3e-12 47.0 2.1 2.0 1 1 1 2 2 2 1 Tubulin binding cofactor A DUF1090 PF06476.12 BAM41928.1 - 0.032 14.3 0.9 0.045 13.9 0.9 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1090) tRNA-synt_2d PF01409.20 BAM41930.1 - 2.4e-75 253.2 0.1 4.8e-75 252.2 0.0 1.5 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) PheRS_DBD3 PF18553.1 BAM41930.1 - 8.7e-06 25.9 0.0 3.2e-05 24.1 0.0 2.0 1 0 0 1 1 1 1 PheRS DNA binding domain 3 tRNA_synthFbeta PF17759.1 BAM41930.1 - 0.0011 18.5 0.0 0.0052 16.2 0.0 1.9 2 0 0 2 2 2 1 Phenylalanyl tRNA synthetase beta chain CLM domain tRNA-synt_2 PF00152.20 BAM41930.1 - 0.0058 15.7 0.2 0.025 13.7 0.0 2.2 3 0 0 3 3 3 1 tRNA synthetases class II (D, K and N) PheRS_DBD1 PF18552.1 BAM41930.1 - 0.023 14.5 0.4 0.078 12.7 0.1 2.0 2 0 0 2 2 2 0 PheRS DNA binding domain 1 tRNA-synt_2b PF00587.25 BAM41930.1 - 0.061 13.3 0.0 0.15 12.0 0.0 1.6 1 0 0 1 1 1 0 tRNA synthetase class II core domain (G, H, P, S and T) S10_plectin PF03501.15 BAM41930.1 - 0.12 12.4 0.0 0.33 11.0 0.0 1.7 1 0 0 1 1 1 0 Plectin/S10 domain DUF1451 PF07295.11 BAM41930.1 - 0.15 12.1 0.4 0.28 11.2 0.4 1.4 1 0 0 1 1 1 0 Zinc-ribbon containing domain Metallophos PF00149.28 BAM41931.1 - 2.7e-16 60.7 3.0 7.8e-16 59.2 3.0 1.8 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Mre11_DNA_bind PF04152.14 BAM41931.1 - 5.3e-11 43.1 5.0 7.7e-11 42.6 0.1 3.2 3 0 0 3 3 3 1 Mre11 DNA-binding presumed domain Metallophos_2 PF12850.7 BAM41931.1 - 1.6e-08 35.0 0.0 1e-07 32.3 0.0 2.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Peptidase_S9 PF00326.21 BAM41931.1 - 0.054 13.0 0.2 0.22 11.0 0.1 2.0 1 1 1 2 2 2 0 Prolyl oligopeptidase family Nbs1_C PF08599.10 BAM41931.1 - 0.29 11.3 2.0 5.1 7.3 0.0 3.4 3 0 0 3 3 3 0 DNA damage repair protein Nbs1 Iso_dh PF00180.20 BAM41932.1 - 6.6e-63 213.0 0.0 8.1e-63 212.7 0.0 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase Proteasome PF00227.26 BAM41934.1 - 7.2e-42 143.0 0.0 8.1e-42 142.9 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit PKcGMP_CC PF16808.5 BAM41935.1 - 3.1e-05 23.7 7.0 0.021 14.6 0.2 3.8 2 1 1 3 3 3 2 Coiled-coil N-terminus of cGMP-dependent protein kinase TMCO5 PF14992.6 BAM41935.1 - 0.00078 19.1 18.3 0.0012 18.5 18.3 1.2 1 0 0 1 1 1 1 TMCO5 family ATG16 PF08614.11 BAM41935.1 - 0.011 16.0 15.3 0.017 15.4 15.2 1.6 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) DUF641 PF04859.12 BAM41935.1 - 0.013 15.8 11.9 0.47 10.8 3.2 2.6 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) KASH_CCD PF14662.6 BAM41935.1 - 0.024 14.5 20.5 0.038 13.8 12.8 2.8 1 1 2 3 3 3 0 Coiled-coil region of CCDC155 or KASH UPF0242 PF06785.11 BAM41935.1 - 0.037 14.1 14.0 0.052 13.6 14.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus SlyX PF04102.12 BAM41935.1 - 0.044 14.4 10.1 0.69 10.6 1.1 3.3 2 1 1 3 3 3 0 SlyX Laminin_II PF06009.12 BAM41935.1 - 0.054 13.5 9.9 0.64 10.0 5.2 2.3 1 1 1 2 2 2 0 Laminin Domain II Fib_alpha PF08702.10 BAM41935.1 - 0.073 13.3 21.7 0.45 10.7 5.1 2.5 1 1 2 3 3 3 0 Fibrinogen alpha/beta chain family CENP-H PF05837.12 BAM41935.1 - 0.14 12.6 13.3 0.32 11.4 11.6 2.3 1 1 0 1 1 1 0 Centromere protein H (CENP-H) CEP209_CC5 PF16574.5 BAM41935.1 - 0.44 10.7 14.4 3.1 8.0 13.9 2.3 1 1 0 1 1 1 0 Coiled-coil region of centrosome protein CE290 DUF3552 PF12072.8 BAM41935.1 - 0.57 9.6 16.7 1.3 8.4 9.1 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3552) Glutaredoxin2_C PF04399.13 BAM41935.1 - 0.66 9.8 6.3 0.75 9.6 1.1 2.5 1 1 1 2 2 2 0 Glutaredoxin 2, C terminal domain GLE1 PF07817.13 BAM41935.1 - 0.84 8.8 5.5 1.4 8.1 5.5 1.4 1 0 0 1 1 1 0 GLE1-like protein DUF724 PF05266.14 BAM41935.1 - 1.2 8.9 15.3 0.59 9.9 12.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF724) V_ATPase_I PF01496.19 BAM41935.1 - 2.1 6.2 11.3 2.8 5.7 11.3 1.2 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family CENP-Q PF13094.6 BAM41935.1 - 3.3 7.9 16.2 9 6.5 5.3 2.9 1 1 2 3 3 3 0 CENP-Q, a CENPA-CAD centromere complex subunit Fez1 PF06818.15 BAM41935.1 - 3.8 7.9 18.0 0.51 10.8 11.9 2.0 1 1 1 2 2 2 0 Fez1 PhoQ_Sensor PF08918.10 BAM41935.1 - 4.5 7.1 6.8 0.98 9.2 2.1 2.1 1 1 1 2 2 2 0 PhoQ Sensor DUF3450 PF11932.8 BAM41935.1 - 5.8 6.1 12.2 11 5.3 0.9 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) APG6_N PF17675.1 BAM41935.1 - 8.3 6.9 21.2 8.1 7.0 14.0 2.2 1 1 1 2 2 2 0 Apg6 coiled-coil region Swi5 PF07061.11 BAM41935.1 - 9.7 6.4 12.6 1.1 9.4 4.2 2.6 1 1 1 2 2 2 0 Swi5 Tmemb_14 PF03647.13 BAM41936.1 - 0.00023 21.8 8.7 0.0004 21.0 8.6 1.5 1 1 0 1 1 1 1 Transmembrane proteins 14C CPP1-like PF11833.8 BAM41936.1 - 0.072 12.7 1.9 0.082 12.6 1.9 1.2 1 0 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like COX6C PF02937.15 BAM41936.1 - 1.7 8.8 4.6 6.5 7.0 0.1 2.6 3 0 0 3 3 3 0 Cytochrome c oxidase subunit VIc DUF2070 PF09843.9 BAM41936.1 - 2.5 6.3 16.3 3.7 5.7 16.3 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) PIG-L PF02585.17 BAM41937.1 - 1.5e-13 51.5 0.0 2.4e-13 50.9 0.0 1.3 1 0 0 1 1 1 1 GlcNAc-PI de-N-acetylase SNF2_N PF00176.23 BAM41938.1 - 1.5e-49 168.6 1.2 3.3e-49 167.5 0.8 1.8 1 1 1 2 2 2 1 SNF2 family N-terminal domain PHD PF00628.29 BAM41938.1 - 3.7e-19 68.4 32.3 1.1e-11 44.5 6.9 3.6 3 0 0 3 3 3 3 PHD-finger ResIII PF04851.15 BAM41938.1 - 2.2e-06 27.8 8.3 3.3e-06 27.2 0.0 3.8 3 1 0 3 3 2 1 Type III restriction enzyme, res subunit zf-PHD-like PF15446.6 BAM41938.1 - 9.4e-05 22.1 14.0 0.0014 18.3 0.6 4.2 3 0 0 3 3 3 2 PHD/FYVE-zinc-finger like domain DEAD PF00270.29 BAM41938.1 - 9.8e-05 22.2 0.0 0.0003 20.6 0.0 1.9 1 0 0 1 1 1 1 DEAD/DEAH box helicase zf-RING_2 PF13639.6 BAM41938.1 - 0.00027 21.2 35.4 0.0019 18.5 7.5 3.8 3 0 0 3 3 3 3 Ring finger domain PHD_2 PF13831.6 BAM41938.1 - 0.00047 19.7 2.6 0.00047 19.7 2.6 3.7 3 1 0 3 3 3 2 PHD-finger Prok-RING_1 PF14446.6 BAM41938.1 - 0.0012 18.7 1.4 0.0012 18.7 1.4 4.5 5 0 0 5 5 5 1 Prokaryotic RING finger family 1 AAA_14 PF13173.6 BAM41938.1 - 0.016 15.2 0.0 0.062 13.3 0.0 2.0 1 0 0 1 1 1 0 AAA domain zf-ANAPC11 PF12861.7 BAM41938.1 - 0.069 13.2 17.5 0.058 13.4 4.0 3.9 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 11 RING-H2 finger Zf_RING PF16744.5 BAM41938.1 - 0.46 10.6 24.8 2.4 8.3 4.8 4.1 3 0 0 3 3 3 0 KIAA1045 RING finger C1_1 PF00130.22 BAM41938.1 - 0.5 10.3 20.8 0.13 12.2 0.3 4.6 5 0 0 5 5 5 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-MIZ PF02891.20 BAM41938.1 - 7 6.5 11.6 13 5.6 2.4 3.5 2 0 0 2 2 2 0 MIZ/SP-RING zinc finger GTP_EFTU PF00009.27 BAM41939.1 - 2e-31 109.0 0.3 6.5e-31 107.4 0.1 1.8 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain MMR_HSR1 PF01926.23 BAM41939.1 - 0.0015 18.6 0.5 0.0049 16.9 0.5 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase SRPRB PF09439.10 BAM41939.1 - 0.031 13.7 0.6 0.23 10.9 0.1 2.2 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit Septin PF00735.18 BAM41939.1 - 0.055 12.7 0.5 0.21 10.8 0.5 1.9 1 1 0 1 1 1 0 Septin Dynamin_N PF00350.23 BAM41939.1 - 0.084 12.9 0.9 0.61 10.1 0.9 2.3 1 1 0 1 1 1 0 Dynamin family FtsK_SpoIIIE PF01580.18 BAM41939.1 - 0.16 11.3 0.4 0.38 10.1 0.0 1.8 2 0 0 2 2 2 0 FtsK/SpoIIIE family Nop52 PF05997.12 BAM41940.1 - 2.1e-38 132.3 4.8 2.1e-38 132.3 4.8 2.0 2 0 0 2 2 2 1 Nucleolar protein,Nop52 NifU PF01106.17 BAM41941.1 - 3e-24 84.9 0.1 4e-24 84.6 0.1 1.2 1 0 0 1 1 1 1 NifU-like domain DUF4850 PF16142.5 BAM41941.1 - 0.11 12.0 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4850) Ank_2 PF12796.7 BAM41942.1 - 9.1e-49 164.0 4.8 1.3e-16 60.9 0.1 4.4 3 1 3 6 6 6 5 Ankyrin repeats (3 copies) Ank_4 PF13637.6 BAM41942.1 - 7.9e-31 106.0 7.7 3.5e-11 43.4 0.1 6.7 4 2 3 7 7 7 6 Ankyrin repeats (many copies) Ank PF00023.30 BAM41942.1 - 3.4e-25 87.3 0.5 2.5e-05 24.5 0.1 7.0 8 0 0 8 8 8 4 Ankyrin repeat Ank_3 PF13606.6 BAM41942.1 - 5.8e-24 81.6 8.2 0.0024 18.2 0.0 8.7 9 0 0 9 9 9 6 Ankyrin repeat Ank_5 PF13857.6 BAM41942.1 - 6.7e-24 83.7 1.9 2.1e-09 37.5 0.0 6.8 2 2 6 8 8 8 7 Ankyrin repeats (many copies) F-box_4 PF15966.5 BAM41942.1 - 0.065 13.1 0.0 12 5.8 0.0 2.8 2 0 0 2 2 2 0 F-box CxC5 PF18718.1 BAM41942.1 - 0.11 12.6 2.0 0.44 10.6 0.0 2.6 3 0 0 3 3 3 0 CxC5 like cysteine cluster associated with KDZ transposases Kelch_4 PF13418.6 BAM41943.1 - 1.7e-31 107.9 7.9 2.2e-08 33.9 0.0 6.6 6 0 0 6 6 6 6 Galactose oxidase, central domain Kelch_3 PF13415.6 BAM41943.1 - 2.7e-24 84.9 13.0 8e-07 29.2 0.0 7.5 7 1 0 7 7 7 4 Galactose oxidase, central domain Kelch_6 PF13964.6 BAM41943.1 - 4.1e-19 68.1 7.4 1.7e-07 31.3 0.1 6.0 5 1 1 6 6 6 4 Kelch motif Kelch_5 PF13854.6 BAM41943.1 - 1.9e-18 66.0 11.7 1.5e-05 24.8 0.3 6.8 6 1 1 7 7 7 4 Kelch motif Kelch_1 PF01344.25 BAM41943.1 - 5.2e-17 61.2 4.9 0.00079 19.0 0.1 5.5 5 0 0 5 5 5 4 Kelch motif Kelch_2 PF07646.15 BAM41943.1 - 4.5e-08 32.8 8.3 0.11 12.5 0.0 5.8 6 0 0 6 6 6 3 Kelch motif PK PF00224.21 BAM41944.1 - 2.2e-136 454.3 2.1 3.5e-136 453.7 2.1 1.3 1 0 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 BAM41944.1 - 1e-25 90.2 0.1 2.7e-25 88.9 0.1 1.8 1 0 0 1 1 1 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 BAM41944.1 - 0.063 12.4 0.0 0.1 11.7 0.0 1.4 1 0 0 1 1 1 0 HpcH/HpaI aldolase/citrate lyase family adh_short PF00106.25 BAM41945.1 - 1.1e-36 126.1 0.0 6.7e-31 107.3 0.0 2.2 1 1 1 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 BAM41945.1 - 1.9e-18 66.9 0.0 4.4e-15 55.9 0.0 2.2 1 1 1 2 2 2 2 Enoyl-(Acyl carrier protein) reductase Epimerase PF01370.21 BAM41945.1 - 1.9e-06 27.5 0.0 2.7e-06 27.1 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family KR PF08659.10 BAM41945.1 - 1e-05 25.5 0.0 1.8e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 KR domain GDP_Man_Dehyd PF16363.5 BAM41945.1 - 0.00011 21.7 0.0 0.0002 20.9 0.0 1.4 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase DUF5340 PF17275.2 BAM41945.1 - 0.17 12.1 0.0 30 4.8 0.0 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5340) adh_short PF00106.25 BAM41946.1 - 1.2e-30 106.4 0.0 1.5e-28 99.6 0.0 2.1 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 BAM41946.1 - 5e-17 62.2 0.0 1.8e-16 60.4 0.0 1.8 1 1 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 BAM41946.1 - 1.4e-05 25.1 0.0 1.9e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 KR domain GDP_Man_Dehyd PF16363.5 BAM41946.1 - 0.00073 19.0 0.0 0.0011 18.4 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 BAM41946.1 - 0.0017 17.9 0.0 0.0029 17.1 0.0 1.3 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family adh_short PF00106.25 BAM41947.1 - 2.2e-32 112.1 0.0 7.1e-28 97.4 0.0 2.1 2 0 0 2 2 2 2 short chain dehydrogenase adh_short_C2 PF13561.6 BAM41947.1 - 3.8e-16 59.4 0.0 2.5e-15 56.7 0.0 1.9 1 1 1 2 2 2 1 Enoyl-(Acyl carrier protein) reductase GDP_Man_Dehyd PF16363.5 BAM41947.1 - 1.1e-07 31.6 0.0 1.7e-07 30.9 0.0 1.2 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 BAM41947.1 - 3.3e-07 30.0 0.0 4.9e-07 29.4 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family KR PF08659.10 BAM41947.1 - 1.4e-05 25.1 0.0 2.1e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 KR domain MRP-L46 PF11788.8 BAM41948.1 - 6.5e-05 23.6 1.7 0.00033 21.4 1.7 1.9 1 1 0 1 1 1 1 39S mitochondrial ribosomal protein L46 NUDIX PF00293.28 BAM41948.1 - 0.029 14.4 0.0 0.063 13.3 0.0 1.5 1 0 0 1 1 1 0 NUDIX domain RNase_PH PF01138.21 BAM41949.1 - 1.4e-08 35.3 0.0 3.8e-08 33.9 0.0 1.7 1 1 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 BAM41949.1 - 0.05 13.6 0.0 0.13 12.3 0.0 1.8 1 1 0 1 1 1 0 3' exoribonuclease family, domain 2 AP2 PF00847.20 BAM41951.1 - 1.3e-07 31.7 2.8 2.5e-07 30.8 2.8 1.5 1 0 0 1 1 1 1 AP2 domain UCR_UQCRX_QCR9 PF05365.12 BAM41952.1 - 8.8e-12 44.8 0.0 1.9e-10 40.5 0.0 2.0 2 0 0 2 2 2 2 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like MutS_III PF05192.18 BAM41953.1 - 1.1 9.5 4.3 2.3 8.4 1.7 2.5 2 1 0 2 2 2 0 MutS domain III Imm3 PF14425.6 BAM41953.1 - 1.3 9.1 9.7 0.099 12.7 0.7 3.1 2 1 0 2 2 2 0 Immunity protein Imm3 FAST_1 PF06743.15 BAM41953.1 - 4.2 7.4 7.5 1 9.4 0.1 3.7 4 1 1 5 5 5 0 FAST kinase-like protein, subdomain 1 Peptidase_C1 PF00112.23 BAM41954.1 - 1.4e-22 80.9 3.8 3.8e-22 79.5 3.1 2.1 1 1 0 1 1 1 1 Papain family cysteine protease Peptidase_C1_2 PF03051.15 BAM41954.1 - 2.3e-06 26.6 1.8 0.00025 19.9 0.2 2.1 2 0 0 2 2 2 2 Peptidase C1-like family Hamartin PF04388.12 BAM41954.1 - 7.8 5.0 10.2 12 4.5 10.2 1.2 1 0 0 1 1 1 0 Hamartin protein Fe-S_biosyn PF01521.20 BAM41955.1 - 1.1e-10 41.7 1.0 5.3e-10 39.5 1.0 1.8 1 1 0 1 1 1 1 Iron-sulphur cluster biosynthesis BLM10_mid PF16507.5 BAM41957.1 - 2.6e-23 82.5 13.4 2.6e-23 82.5 13.4 4.4 4 1 0 4 4 4 1 Proteasome-substrate-size regulator, mid region DUF3437 PF11919.8 BAM41957.1 - 6e-05 22.9 0.1 0.00044 20.1 0.1 2.6 1 0 0 1 1 1 1 Domain of unknown function (DUF3437) Cullin PF00888.22 BAM41958.1 - 5.9e-67 226.7 37.1 5.9e-67 226.7 37.1 1.6 1 1 1 2 2 2 1 Cullin family Cullin_Nedd8 PF10557.9 BAM41958.1 - 0.00054 20.0 0.4 0.0023 17.9 0.1 2.3 2 0 0 2 2 2 1 Cullin protein neddylation domain Nab2 PF11517.8 BAM41958.1 - 0.086 13.1 1.7 4.3 7.7 0.1 3.5 3 0 0 3 3 3 0 Nuclear abundant poly(A) RNA-bind protein 2 (Nab2) Mito_carr PF00153.27 BAM41959.1 - 6.6e-30 102.9 4.7 5.8e-12 45.4 0.1 3.1 3 0 0 3 3 3 3 Mitochondrial carrier protein DUF565 PF04483.12 BAM41959.1 - 0.13 12.8 0.2 0.54 10.8 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF565) tRNA-synt_1 PF00133.22 BAM41960.1 - 1.8e-35 122.3 2.7 1.9e-12 46.3 0.5 4.5 3 1 0 3 3 3 3 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 BAM41960.1 - 3.1e-17 62.4 2.7 6.3e-08 31.8 0.0 2.9 3 0 0 3 3 3 2 tRNA synthetases class I (M) Anticodon_1 PF08264.13 BAM41960.1 - 4.6e-13 49.4 3.1 1.2e-12 48.0 3.1 1.7 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 BAM41960.1 - 8.1e-10 38.5 0.0 2.2e-09 37.1 0.0 1.7 1 0 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 BAM41960.1 - 0.064 12.2 3.8 0.13 11.1 0.0 2.7 3 0 0 3 3 3 0 tRNA synthetases class I (K) YafO_toxin PF13957.6 BAM41960.1 - 0.096 12.7 0.6 1.8 8.7 0.4 2.9 2 0 0 2 2 2 0 Toxin YafO, type II toxin-antitoxin system SYF2 PF08231.12 BAM41960.1 - 6 7.2 8.1 0.61 10.5 2.0 2.4 2 0 0 2 2 2 0 SYF2 splicing factor UPF0004 PF00919.20 BAM41962.1 - 1.5e-16 60.2 0.0 3.2e-16 59.2 0.0 1.6 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 Radical_SAM PF04055.21 BAM41962.1 - 4.3e-16 59.7 0.1 8.7e-16 58.7 0.1 1.6 1 0 0 1 1 1 1 Radical SAM superfamily S1 PF00575.23 BAM41963.1 - 4e-05 23.9 0.7 0.29 11.5 0.0 3.6 2 1 0 2 2 2 2 S1 RNA binding domain YqeY PF09424.10 BAM41963.1 - 0.0016 18.5 1.4 0.56 10.3 0.0 2.5 2 0 0 2 2 2 2 Yqey-like protein Eisosome1 PF12757.7 BAM41963.1 - 0.0062 16.8 3.6 0.017 15.4 3.6 1.7 1 0 0 1 1 1 1 Eisosome protein 1 WWE PF02825.20 BAM41963.1 - 0.27 11.9 5.1 0.2 12.3 0.4 3.2 3 0 0 3 3 3 0 WWE domain CAF1 PF04857.20 BAM41966.1 - 3.3e-20 72.5 1.7 5.6e-10 38.9 0.0 2.5 1 1 1 2 2 2 2 CAF1 family ribonuclease Urocanase_C PF17392.2 BAM41966.1 - 0.55 9.6 2.7 0.85 9.0 2.7 1.2 1 0 0 1 1 1 0 Urocanase C-terminal domain DUF2009 PF09418.10 BAM41968.1 - 6.8e-186 618.8 8.3 3.2e-112 375.9 0.6 3.2 1 1 1 3 3 3 3 Protein of unknown function (DUF2009) FAST_1 PF06743.15 BAM41968.1 - 0.66 10.0 4.4 3 7.8 0.2 2.8 2 0 0 2 2 2 0 FAST kinase-like protein, subdomain 1 Cyclin_N PF00134.23 BAM41969.1 - 1.7e-08 34.2 1.6 3.8e-08 33.1 1.2 1.8 1 1 0 1 1 1 1 Cyclin, N-terminal domain FAST_1 PF06743.15 BAM41970.1 - 0.053 13.5 7.1 0.16 11.9 0.3 4.0 5 0 0 5 5 5 0 FAST kinase-like protein, subdomain 1 Ras PF00071.22 BAM41971.1 - 1.2e-41 142.1 1.3 5.5e-30 104.1 0.1 2.1 2 0 0 2 2 2 2 Ras family Roc PF08477.13 BAM41971.1 - 1.2e-29 103.0 0.5 3.5e-18 66.0 0.0 2.6 3 0 0 3 3 3 2 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 BAM41971.1 - 2.3e-11 43.5 0.0 1.1e-09 38.0 0.0 2.1 2 0 0 2 2 2 1 ADP-ribosylation factor family GTP_EFTU PF00009.27 BAM41971.1 - 2.2e-06 27.4 0.0 4.6e-06 26.3 0.0 1.5 2 0 0 2 2 2 1 Elongation factor Tu GTP binding domain RsgA_GTPase PF03193.16 BAM41971.1 - 0.0032 17.4 0.4 0.81 9.6 0.1 2.2 2 0 0 2 2 2 2 RsgA GTPase MMR_HSR1 PF01926.23 BAM41971.1 - 0.0037 17.3 0.0 0.0095 16.0 0.0 1.7 1 1 0 1 1 1 1 50S ribosome-binding GTPase FlbD PF06289.11 BAM41971.1 - 0.056 13.1 0.1 0.1 12.3 0.1 1.4 1 0 0 1 1 1 0 Flagellar and Swarming motility proteins HAP2-GCS1 PF10699.9 BAM41972.1 - 8.3e-12 44.9 0.2 1.9e-11 43.8 0.2 1.6 1 0 0 1 1 1 1 Male gamete fusion factor DUF2371 PF10177.9 BAM41972.1 - 0.11 12.6 0.0 0.24 11.5 0.0 1.5 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) zf-HC5HC2H_2 PF13832.6 BAM41974.1 - 3e-30 104.6 77.0 2.3e-12 47.1 12.0 7.8 7 1 0 7 7 7 5 PHD-zinc-finger like domain zf-HC5HC2H PF13771.6 BAM41974.1 - 7.4e-15 55.0 96.7 6.1e-07 29.6 5.5 10.0 5 3 4 9 9 9 4 PHD-like zinc-binding domain PHD_2 PF13831.6 BAM41974.1 - 3.3e-10 39.4 43.2 1.5e-06 27.6 3.9 7.2 6 0 0 6 6 6 3 PHD-finger PHD PF00628.29 BAM41974.1 - 1.3e-09 37.8 93.6 7.2e-07 29.0 5.8 9.4 8 3 0 9 9 9 5 PHD-finger Fibrillin_U_N PF18193.1 BAM41974.1 - 0.15 12.2 5.7 0.12 12.5 0.7 2.7 2 0 0 2 2 2 0 Fibrillin 1 unique N-terminal domain Transposase_22 PF02994.14 BAM41974.1 - 0.32 11.2 1.8 2.6 8.3 2.1 2.3 2 0 0 2 2 2 0 L1 transposable element RBD-like domain Ribosomal_S14 PF00253.21 BAM41974.1 - 5.3 6.9 8.1 15 5.4 0.1 3.6 3 0 0 3 3 3 0 Ribosomal protein S14p/S29e tRNA-synt_1 PF00133.22 BAM41975.1 - 3.2e-73 247.0 0.0 5.7e-73 246.1 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 BAM41975.1 - 1.7e-07 30.3 0.1 0.39 9.4 0.0 4.2 4 0 0 4 4 4 4 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 BAM41975.1 - 5.3e-05 22.7 0.0 0.14 11.4 0.0 2.7 2 1 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain Zn_ribbon_SprT PF17283.2 BAM41976.1 - 0.015 15.2 0.3 0.024 14.5 0.3 1.3 1 0 0 1 1 1 0 SprT-like zinc ribbon domain zinc_ribbon_12 PF11331.8 BAM41976.1 - 0.03 14.1 0.1 0.035 13.9 0.1 1.1 1 0 0 1 1 1 0 Probable zinc-ribbon domain PI3_PI4_kinase PF00454.27 BAM41977.1 - 4.2e-42 144.7 0.5 1.6e-41 142.8 0.0 2.1 2 1 0 2 2 2 1 Phosphatidylinositol 3- and 4-kinase RAWUL PF16207.5 BAM41977.1 - 0.25 12.0 1.6 1.4 9.6 0.2 2.6 2 0 0 2 2 2 0 RAWUL domain RING finger- and WD40-associated ubiquitin-like Spec3 PF15795.5 BAM41978.1 - 4.7e-05 23.8 11.6 0.0005 20.6 5.6 2.2 1 1 1 2 2 2 2 Ectodermal ciliogenesis protein DUF5626 PF18540.1 BAM41979.1 - 0.046 14.2 2.3 0.096 13.2 2.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5626) VIR_N PF15912.5 BAM41980.1 - 0.046 13.3 1.3 0.069 12.7 1.3 1.3 1 0 0 1 1 1 0 Virilizer, N-terminal PRIMA1 PF16101.5 BAM41980.1 - 2.9 8.0 6.5 0.4 10.7 0.7 2.1 2 0 0 2 2 2 0 Proline-rich membrane anchor 1 MTS PF05175.14 BAM41981.1 - 2.8e-11 43.3 0.0 6.2e-10 38.9 0.0 2.7 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_24 PF13578.6 BAM41981.1 - 6.5e-05 23.9 0.0 0.00013 22.9 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAM41981.1 - 0.0013 18.6 0.0 0.002 17.9 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_33 PF10017.9 BAM41981.1 - 0.0033 16.6 0.0 0.0048 16.1 0.0 1.2 1 0 0 1 1 1 1 Histidine-specific methyltransferase, SAM-dependent UPF0020 PF01170.18 BAM41981.1 - 0.012 15.3 0.0 0.023 14.4 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 rRNA_methylase PF06962.12 BAM41981.1 - 0.016 15.2 0.0 0.048 13.6 0.0 1.8 2 0 0 2 2 2 0 Putative rRNA methylase Methyltransf_25 PF13649.6 BAM41981.1 - 0.03 15.0 0.0 0.14 12.9 0.0 2.1 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_18 PF12847.7 BAM41981.1 - 0.033 14.1 0.3 0.26 11.2 0.0 2.5 2 1 0 2 2 2 0 Methyltransferase domain DUF2431 PF10354.9 BAM41981.1 - 0.049 13.9 0.0 0.075 13.3 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF2431) PCMT PF01135.19 BAM41981.1 - 0.064 13.0 0.0 0.14 11.9 0.0 1.7 1 1 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Cons_hypoth95 PF03602.15 BAM41981.1 - 0.09 12.4 0.0 0.22 11.2 0.0 1.6 1 0 0 1 1 1 0 Conserved hypothetical protein 95 SPOC PF07744.13 BAM41982.1 - 1.1e-17 64.3 0.0 1.7e-17 63.7 0.0 1.2 1 0 0 1 1 1 1 SPOC domain Mustang PF15682.5 BAM41982.1 - 0.13 12.4 0.0 0.24 11.5 0.0 1.4 1 0 0 1 1 1 0 Musculoskeletal, temporally activated-embryonic nuclear protein 1 HABP4_PAI-RBP1 PF04774.15 BAM41983.1 - 3.7e-16 60.0 7.1 3.7e-16 60.0 7.1 1.7 1 1 1 2 2 2 1 Hyaluronan / mRNA binding family DUF3682 PF12446.8 BAM41983.1 - 0.28 11.7 2.7 0.56 10.7 2.7 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3682) DEAD PF00270.29 BAM41984.1 - 2.8e-49 167.3 0.0 5.4e-49 166.3 0.0 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM41984.1 - 1.7e-31 108.9 0.0 1.9e-30 105.4 0.0 2.4 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ResIII PF04851.15 BAM41984.1 - 2.6e-05 24.3 0.0 5.4e-05 23.3 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit Peptidase_M17 PF00883.21 BAM41986.1 - 3.7e-103 345.1 0.7 5e-103 344.6 0.7 1.2 1 0 0 1 1 1 1 Cytosol aminopeptidase family, catalytic domain Peptidase_M17_N PF02789.17 BAM41986.1 - 0.013 15.4 0.0 0.053 13.4 0.0 2.0 2 0 0 2 2 2 0 Cytosol aminopeptidase family, N-terminal domain partial_CstF PF15861.5 BAM41987.1 - 2.1e-25 88.3 1.2 4.6e-25 87.2 1.2 1.6 1 0 0 1 1 1 1 Partial cleavage stimulation factor domain CSTF2_hinge PF14327.6 BAM41987.1 - 2.8e-15 56.5 0.0 1e-14 54.7 0.0 2.0 1 0 0 1 1 1 1 Hinge domain of cleavage stimulation factor subunit 2 CPW_WPC PF09717.10 BAM41988.1 - 1.9e-21 76.8 21.1 4.1e-13 50.1 4.5 2.6 2 0 0 2 2 2 2 Plasmodium falciparum domain of unknown function (CPW_WPC) SGS PF05002.15 BAM41988.1 - 3.6e-07 30.2 3.9 1.7e-06 28.1 3.9 2.2 1 1 0 1 1 1 1 SGS domain FH2 PF02181.23 BAM41989.1 - 5.2e-64 216.7 3.4 5.2e-64 216.7 3.4 2.5 2 1 1 3 3 3 1 Formin Homology 2 Domain TPR_12 PF13424.6 BAM41989.1 - 9.2e-10 38.7 0.0 0.00029 21.1 0.0 3.2 2 1 1 3 3 3 2 Tetratricopeptide repeat TPR_1 PF00515.28 BAM41989.1 - 2.3e-07 30.4 0.1 0.00013 21.7 0.0 3.8 4 0 0 4 4 4 1 Tetratricopeptide repeat TPR_10 PF13374.6 BAM41989.1 - 0.00013 21.7 0.0 0.013 15.4 0.0 3.4 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_2 PF07719.17 BAM41989.1 - 0.0044 17.0 0.1 2 8.7 0.0 4.4 5 0 0 5 5 5 1 Tetratricopeptide repeat TH1 PF04858.13 BAM41990.1 - 2.6e-14 52.8 10.1 3.4e-08 32.6 2.4 3.9 4 0 0 4 4 4 3 TH1 protein zf-RING_2 PF13639.6 BAM41991.1 - 2.1e-09 37.5 8.0 4.1e-09 36.6 8.0 1.5 1 0 0 1 1 1 1 Ring finger domain zf-rbx1 PF12678.7 BAM41991.1 - 3.5e-06 27.2 5.7 9.7e-06 25.8 5.7 1.8 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_UBOX PF13445.6 BAM41991.1 - 6.6e-06 26.1 6.3 1.6e-05 24.8 6.3 1.7 1 0 0 1 1 1 1 RING-type zinc-finger zf-C3HC4_3 PF13920.6 BAM41991.1 - 2.7e-05 23.9 5.6 5.4e-05 23.0 5.6 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Filament PF00038.21 BAM41991.1 - 5.2e-05 23.0 24.1 8.8e-05 22.2 24.1 1.3 1 0 0 1 1 1 1 Intermediate filament protein Zn_ribbon_17 PF17120.5 BAM41991.1 - 7e-05 22.4 5.9 0.00018 21.1 5.7 1.7 1 1 1 2 2 2 1 Zinc-ribbon, C4HC2 type Prok-RING_4 PF14447.6 BAM41991.1 - 0.0001 22.1 3.5 0.00027 20.7 3.4 1.8 1 1 0 1 1 1 1 Prokaryotic RING finger family 4 zf-C3HC4_2 PF13923.6 BAM41991.1 - 0.00012 21.8 8.4 0.00025 20.8 8.4 1.6 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4 PF00097.25 BAM41991.1 - 0.0002 21.2 7.8 0.00047 20.0 7.8 1.7 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) SesA PF17107.5 BAM41991.1 - 0.00037 20.7 7.0 0.00037 20.7 7.0 2.2 1 1 1 2 2 2 1 N-terminal domain on NACHT_NTPase and P-loop NTPases zf-RING_11 PF17123.5 BAM41991.1 - 0.0004 20.0 4.7 0.001 18.8 4.7 1.7 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_5 PF14634.6 BAM41991.1 - 0.00093 19.1 6.2 0.002 18.1 6.2 1.6 1 0 0 1 1 1 1 zinc-RING finger domain zf-ANAPC11 PF12861.7 BAM41991.1 - 0.0012 18.9 1.5 0.0024 17.9 1.5 1.5 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 11 RING-H2 finger ATG16 PF08614.11 BAM41991.1 - 0.017 15.4 9.7 0.017 15.4 9.7 3.0 2 1 0 2 2 2 0 Autophagy protein 16 (ATG16) KASH_CCD PF14662.6 BAM41991.1 - 0.21 11.4 28.2 0.63 9.8 6.7 2.7 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH DUF489 PF04356.12 BAM41991.1 - 0.29 11.1 7.5 0.4 10.7 6.7 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF489) Prok-RING_1 PF14446.6 BAM41991.1 - 0.29 11.1 5.2 0.78 9.7 1.9 2.6 2 0 0 2 2 2 0 Prokaryotic RING finger family 1 FlxA PF14282.6 BAM41991.1 - 0.56 10.2 26.3 1.7 8.7 1.8 4.3 1 1 3 4 4 4 0 FlxA-like protein SlyX PF04102.12 BAM41991.1 - 0.89 10.2 13.0 5.3 7.7 0.4 4.5 2 2 0 3 3 3 0 SlyX PHD PF00628.29 BAM41991.1 - 0.92 9.5 5.8 2.2 8.2 5.8 1.7 1 0 0 1 1 1 0 PHD-finger RINGv PF12906.7 BAM41991.1 - 1.1 9.4 6.9 2.5 8.3 6.9 1.7 1 0 0 1 1 1 0 RING-variant domain zf-C3HC4_4 PF15227.6 BAM41991.1 - 1.3 9.3 10.5 0.5 10.6 7.7 1.9 2 0 0 2 2 1 0 zinc finger of C3HC4-type, RING FANCL_C PF11793.8 BAM41991.1 - 1.4 9.1 8.2 6.5 7.0 8.2 2.2 1 1 0 1 1 1 0 FANCL C-terminal domain Rootletin PF15035.6 BAM41991.1 - 4.9 7.1 24.0 0.18 11.8 14.5 2.5 1 1 1 2 2 2 0 Ciliary rootlet component, centrosome cohesion ADIP PF11559.8 BAM41991.1 - 5.2 7.1 30.0 0.11 12.6 4.8 3.8 2 1 1 3 3 3 0 Afadin- and alpha -actinin-Binding TolA_bind_tri PF16331.5 BAM41991.1 - 7.3 6.7 10.8 66 3.7 3.9 3.5 1 1 1 3 3 3 0 TolA binding protein trimerisation Pox_A_type_inc PF04508.12 BAM41991.1 - 7.9 6.5 9.7 1.7 8.6 0.4 4.0 4 0 0 4 4 4 0 Viral A-type inclusion protein repeat BST2 PF16716.5 BAM41991.1 - 8.8 7.0 22.4 0.22 12.1 2.0 3.7 2 1 1 3 3 3 0 Bone marrow stromal antigen 2 Tropomyosin_1 PF12718.7 BAM41991.1 - 9.9 6.3 34.2 0.56 10.3 16.4 2.8 1 1 0 2 2 2 0 Tropomyosin like BTB_2 PF02214.22 BAM41992.1 - 1.8e-16 60.3 0.0 4.4e-16 59.0 0.0 1.6 1 0 0 1 1 1 1 BTB/POZ domain Mito_carr PF00153.27 BAM41993.1 - 9e-36 121.7 0.9 2e-15 56.5 0.1 3.1 2 1 1 3 3 3 3 Mitochondrial carrier protein Pkinase PF00069.25 BAM41995.1 - 1.5e-69 234.3 0.1 2e-69 233.9 0.1 1.2 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM41995.1 - 2.9e-35 121.8 0.0 4.4e-35 121.2 0.0 1.3 1 0 0 1 1 1 1 Protein tyrosine kinase Haspin_kinase PF12330.8 BAM41995.1 - 2.6e-05 23.4 1.8 7.2e-05 21.9 1.7 1.6 1 1 0 1 1 1 1 Haspin like kinase domain RIO1 PF01163.22 BAM41995.1 - 0.00071 19.2 1.5 0.00074 19.2 0.6 1.5 1 1 0 1 1 1 1 RIO1 family Kinase-like PF14531.6 BAM41995.1 - 0.0021 17.4 0.0 0.0041 16.5 0.0 1.5 1 0 0 1 1 1 1 Kinase-like Kdo PF06293.14 BAM41995.1 - 0.03 13.7 0.2 0.03 13.7 0.2 1.6 2 0 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family zf-U1 PF06220.12 BAM41995.1 - 0.14 12.0 1.5 0.35 10.7 1.5 1.7 1 0 0 1 1 1 0 U1 zinc finger APH PF01636.23 BAM41995.1 - 0.2 11.6 0.0 0.43 10.5 0.0 1.5 1 1 0 1 1 1 0 Phosphotransferase enzyme family Memo PF01875.17 BAM41996.1 - 2.9e-48 164.4 0.1 3.5e-48 164.1 0.1 1.0 1 0 0 1 1 1 1 Memo-like protein LETM1 PF07766.13 BAM41997.1 - 2.5e-83 279.5 13.4 2.5e-83 279.5 13.4 2.7 2 1 1 3 3 3 1 LETM1-like protein SAP PF02037.27 BAM41997.1 - 0.05 13.4 5.3 11 5.9 0.1 4.3 3 0 0 3 3 3 0 SAP domain CRAL_TRIO PF00650.20 BAM41998.1 - 2.3e-21 76.1 0.0 4.7e-21 75.2 0.0 1.5 1 0 0 1 1 1 1 CRAL/TRIO domain CRAL_TRIO_N PF03765.15 BAM41998.1 - 0.0046 17.1 0.0 0.019 15.1 0.0 2.1 1 0 0 1 1 1 1 CRAL/TRIO, N-terminal domain CRAL_TRIO_2 PF13716.6 BAM41998.1 - 0.046 13.9 0.0 0.092 12.9 0.0 1.5 1 0 0 1 1 1 0 Divergent CRAL/TRIO domain zf-CDGSH PF09360.10 BAM41999.1 - 3.1e-08 33.7 0.2 3.8e-08 33.4 0.2 1.4 1 0 0 1 1 1 1 Iron-binding zinc finger CDGSH type Maf1 PF09174.10 BAM42001.1 - 7.7e-28 97.8 7.6 1e-27 97.4 7.6 1.2 1 0 0 1 1 1 1 Maf1 regulator Anemone_cytotox PF06369.12 BAM42002.1 - 0.02 14.5 0.6 0.053 13.1 0.6 1.7 1 0 0 1 1 1 0 Sea anemone cytotoxic protein RRM_1 PF00076.22 BAM42003.1 - 3.9e-13 49.0 0.1 6.2e-13 48.4 0.1 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Limkain-b1 PF11608.8 BAM42003.1 - 0.00037 20.5 0.2 0.00097 19.2 0.2 1.7 1 1 0 1 1 1 1 Limkain b1 RRM_5 PF13893.6 BAM42003.1 - 0.0051 16.4 0.0 0.0076 15.9 0.0 1.2 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 BAM42003.1 - 0.029 14.4 0.0 0.049 13.7 0.0 1.4 1 0 0 1 1 1 0 RNA binding motif TpcC PF12642.7 BAM42003.1 - 0.043 13.6 0.2 0.071 12.9 0.2 1.2 1 0 0 1 1 1 0 Conjugative transposon protein TcpC DbpA PF03880.15 BAM42003.1 - 0.076 13.0 0.0 0.28 11.2 0.0 2.0 2 0 0 2 2 2 0 DbpA RNA binding domain Btz PF09405.10 BAM42003.1 - 0.08 13.2 0.1 0.22 11.8 0.0 1.7 2 0 0 2 2 2 0 CASC3/Barentsz eIF4AIII binding Arf PF00025.21 BAM42004.1 - 3.5e-58 195.9 0.0 4e-58 195.7 0.0 1.0 1 0 0 1 1 1 1 ADP-ribosylation factor family G-alpha PF00503.20 BAM42004.1 - 3.8e-09 36.2 0.0 1.2e-05 24.6 0.0 2.4 1 1 1 2 2 2 2 G-protein alpha subunit MMR_HSR1 PF01926.23 BAM42004.1 - 4.4e-09 36.4 0.0 6e-09 36.0 0.0 1.2 1 0 0 1 1 1 1 50S ribosome-binding GTPase Roc PF08477.13 BAM42004.1 - 1.9e-08 34.5 0.0 4.8e-08 33.2 0.0 1.6 1 1 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 BAM42004.1 - 3.4e-08 33.1 0.0 4.4e-08 32.8 0.0 1.1 1 0 0 1 1 1 1 Signal recognition particle receptor beta subunit Ras PF00071.22 BAM42004.1 - 3.3e-07 30.0 0.0 1.3e-06 28.1 0.0 1.7 1 1 1 2 2 2 1 Ras family GTP_EFTU PF00009.27 BAM42004.1 - 4.2e-05 23.2 0.0 0.00046 19.8 0.0 1.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Gtr1_RagA PF04670.12 BAM42004.1 - 0.0003 20.2 0.0 0.00036 20.0 0.0 1.1 1 0 0 1 1 1 1 Gtr1/RagA G protein conserved region AAA_22 PF13401.6 BAM42004.1 - 0.019 15.3 0.0 0.041 14.1 0.0 1.7 1 1 0 1 1 1 0 AAA domain cobW PF02492.19 BAM42004.1 - 0.045 13.3 0.0 5.4 6.6 0.0 2.1 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain RsgA_GTPase PF03193.16 BAM42004.1 - 0.068 13.1 0.0 1.4 8.8 0.0 2.1 1 1 1 2 2 2 0 RsgA GTPase PduV-EutP PF10662.9 BAM42004.1 - 0.11 12.3 0.0 0.23 11.2 0.0 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation CAS_CSE1 PF03378.15 BAM42005.1 - 1.4e-47 162.2 13.4 1.4e-47 162.2 13.4 2.1 3 0 0 3 3 3 1 CAS/CSE protein, C-terminus Cse1 PF08506.10 BAM42005.1 - 1.9e-36 125.7 11.1 1.9e-36 125.7 11.1 2.7 3 0 0 3 3 3 1 Cse1 IBN_N PF03810.19 BAM42005.1 - 0.002 18.0 0.3 0.088 12.7 0.0 3.1 2 0 0 2 2 2 1 Importin-beta N-terminal domain TAF6_C PF07571.13 BAM42005.1 - 0.023 15.0 0.4 0.12 12.8 0.1 2.3 2 0 0 2 2 2 0 TAF6 C-terminal HEAT repeat domain RRM_1 PF00076.22 BAM42006.1 - 2.2e-36 123.5 0.0 4.8e-18 64.7 0.0 3.3 3 0 0 3 3 3 3 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Nup35_RRM_2 PF14605.6 BAM42006.1 - 6.5e-06 26.0 0.0 0.017 15.1 0.0 3.3 3 0 0 3 3 3 2 Nup53/35/40-type RNA recognition motif RRM_occluded PF16842.5 BAM42006.1 - 0.0023 17.8 0.0 24 4.9 0.0 3.4 3 1 0 3 3 3 1 Occluded RNA-recognition motif RRM_7 PF16367.5 BAM42006.1 - 0.018 15.1 0.1 0.27 11.4 0.0 2.7 3 0 0 3 3 3 0 RNA recognition motif DUF4651 PF15513.6 BAM42006.1 - 0.021 14.6 0.0 3.9 7.3 0.0 2.9 3 0 0 3 3 3 0 Domain of unknown function (DUF4651) DbpA PF03880.15 BAM42006.1 - 0.071 13.1 0.0 80 3.3 0.0 3.4 3 0 0 3 3 3 0 DbpA RNA binding domain DPM3 PF08285.11 BAM42007.1 - 3.5e-14 52.8 0.2 4.3e-14 52.5 0.2 1.1 1 0 0 1 1 1 1 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) DUF1634 PF07843.11 BAM42007.1 - 0.3 11.2 3.5 0.46 10.6 3.5 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1634) zf-RING_UBOX PF13445.6 BAM42008.1 - 7.1e-08 32.3 1.3 1.8e-07 31.1 1.3 1.8 1 0 0 1 1 1 1 RING-type zinc-finger zf-RING_5 PF14634.6 BAM42008.1 - 1.3e-06 28.2 1.1 2.9e-06 27.1 1.1 1.7 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 BAM42008.1 - 1.2e-05 25.0 1.5 3.4e-05 23.6 1.5 1.8 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_2 PF13639.6 BAM42008.1 - 0.00011 22.5 4.5 0.00032 21.0 2.6 2.5 2 1 0 2 2 2 1 Ring finger domain zf-C3HC4_2 PF13923.6 BAM42008.1 - 0.00015 21.5 1.7 0.0028 17.5 0.2 2.5 2 0 0 2 2 2 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 BAM42008.1 - 0.00062 19.6 0.9 0.043 13.7 0.1 2.5 2 0 0 2 2 2 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 BAM42008.1 - 0.0086 16.3 1.3 0.025 14.8 1.3 1.8 1 0 0 1 1 1 1 RING-H2 zinc finger domain zf-C3HC4_3 PF13920.6 BAM42008.1 - 0.0097 15.8 5.3 0.15 12.0 5.4 2.3 1 1 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 BAM42008.1 - 0.013 15.7 2.7 0.038 14.1 0.4 2.5 2 0 0 2 2 2 0 zinc finger of C3HC4-type, RING IBR PF01485.21 BAM42008.1 - 0.039 14.2 0.6 0.12 12.6 0.6 1.8 1 0 0 1 1 1 0 IBR domain, a half RING-finger domain zf-RING_11 PF17123.5 BAM42008.1 - 0.043 13.6 3.1 0.61 9.9 3.1 2.4 1 1 0 1 1 1 0 RING-like zinc finger Lar_restr_allev PF14354.6 BAM42008.1 - 0.073 13.5 0.8 0.18 12.2 0.8 1.7 1 0 0 1 1 1 0 Restriction alleviation protein Lar SURF1 PF02104.15 BAM42009.1 - 7.5e-32 111.0 0.0 1.1e-31 110.4 0.0 1.3 1 0 0 1 1 1 1 SURF1 family RabGAP-TBC PF00566.18 BAM42010.1 - 0.00024 20.8 2.4 0.00029 20.5 1.1 1.8 2 0 0 2 2 2 1 Rab-GTPase-TBC domain GRDP-like PF07173.12 BAM42011.1 - 0.054 14.1 0.8 0.054 14.1 0.8 2.0 2 0 0 2 2 2 0 Glycine-rich domain-containing protein-like DUF2040 PF09745.9 BAM42011.1 - 2.7 8.1 8.8 40 4.3 0.4 3.7 4 0 0 4 4 4 0 Coiled-coil domain-containing protein 55 (DUF2040) zf-C2H2_2 PF12756.7 BAM42012.1 - 0.00018 21.8 2.8 0.00021 21.6 2.8 1.3 1 0 0 1 1 1 1 C2H2 type zinc-finger (2 copies) CCDC84 PF14968.6 BAM42012.1 - 0.00024 20.8 0.8 0.00027 20.7 0.8 1.2 1 0 0 1 1 1 1 Coiled coil protein 84 AKAP95 PF04988.12 BAM42012.1 - 0.0019 18.5 2.6 0.0024 18.1 2.6 1.3 1 0 0 1 1 1 1 A-kinase anchoring protein 95 (AKAP95) zf-C2H2_jaz PF12171.8 BAM42012.1 - 0.009 16.3 5.4 0.018 15.3 5.4 1.6 1 0 0 1 1 1 1 Zinc-finger double-stranded RNA-binding tRNA_m1G_MT PF01746.21 BAM42013.1 - 9.2e-11 41.8 0.0 3.2e-10 40.0 0.0 1.9 2 0 0 2 2 2 1 tRNA (Guanine-1)-methyltransferase Mit_ribos_Mrp51 PF11709.8 BAM42013.1 - 0.0073 15.9 2.1 0.0082 15.8 1.4 1.4 2 0 0 2 2 2 1 Mitochondrial ribosomal protein subunit TFIIE-A_C PF11521.8 BAM42013.1 - 0.15 12.4 2.1 0.16 12.3 0.6 1.8 2 0 0 2 2 2 0 C-terminal general transcription factor TFIIE alpha XPG_I PF00867.18 BAM42014.1 - 2.1e-25 88.9 1.8 4.7e-25 87.8 0.1 2.6 2 0 0 2 2 2 1 XPG I-region XPG_N PF00752.17 BAM42014.1 - 1.9e-16 60.4 0.0 8.5e-16 58.3 0.0 2.2 2 0 0 2 2 2 1 XPG N-terminal domain XPG_I_2 PF12813.7 BAM42014.1 - 0.00032 20.3 0.0 0.00096 18.7 0.0 1.8 1 0 0 1 1 1 1 XPG domain containing 5_3_exonuc PF01367.20 BAM42014.1 - 0.084 13.5 0.1 0.85 10.3 0.0 2.7 2 0 0 2 2 2 0 5'-3' exonuclease, C-terminal SAM fold TFIIS_C PF01096.18 BAM42015.1 - 1.1e-19 70.0 4.3 1.1e-19 70.0 4.3 2.8 3 0 0 3 3 3 1 Transcription factor S-II (TFIIS) Zn_Tnp_IS1595 PF12760.7 BAM42015.1 - 2.8e-05 24.0 8.0 0.0011 18.9 0.7 2.3 2 0 0 2 2 2 2 Transposase zinc-ribbon domain TF_Zn_Ribbon PF08271.12 BAM42015.1 - 0.00065 19.2 6.4 0.0046 16.4 1.1 2.5 2 0 0 2 2 2 2 TFIIB zinc-binding RNA_POL_M_15KD PF02150.16 BAM42015.1 - 0.0014 18.4 1.8 0.0014 18.4 1.8 2.8 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit zf-piccolo PF05715.13 BAM42015.1 - 0.044 13.9 5.7 0.99 9.6 0.3 2.5 2 0 0 2 2 2 0 Piccolo Zn-finger zf-Dof PF02701.15 BAM42015.1 - 0.052 13.7 10.7 0.49 10.6 3.3 2.3 2 0 0 2 2 2 0 Dof domain, zinc finger PhnA_Zn_Ribbon PF08274.12 BAM42015.1 - 0.22 11.5 6.6 0.49 10.4 0.2 2.6 2 1 0 2 2 2 0 PhnA Zinc-Ribbon zf-RRPl_C4 PF17026.5 BAM42015.1 - 0.29 11.2 7.2 2.8 8.1 7.2 2.1 1 1 0 1 1 1 0 Putative ribonucleoprotein zinc-finger pf C4 type zf-ACC PF17848.1 BAM42015.1 - 0.45 10.6 10.0 4.4 7.5 0.2 3.8 4 1 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain FAM76 PF16046.5 BAM42015.1 - 0.77 9.1 6.9 1.2 8.4 6.9 1.3 1 1 0 1 1 1 0 FAM76 protein zinc_ribbon_10 PF10058.9 BAM42015.1 - 1.3 8.8 11.3 1.4 8.7 1.1 2.7 2 1 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein Kelch_3 PF13415.6 BAM42016.1 - 8.2e-17 61.1 5.2 0.00029 21.0 0.0 5.4 5 0 0 5 5 5 3 Galactose oxidase, central domain Kelch_5 PF13854.6 BAM42016.1 - 4.7e-12 45.6 15.4 3.2e-05 23.8 1.1 5.4 5 1 0 5 5 5 3 Kelch motif Kelch_4 PF13418.6 BAM42016.1 - 1.5e-11 44.1 6.5 0.059 13.4 0.5 5.4 5 0 0 5 5 5 4 Galactose oxidase, central domain Kelch_2 PF07646.15 BAM42016.1 - 1.2e-06 28.3 4.3 0.011 15.6 0.9 4.7 4 0 0 4 4 4 2 Kelch motif Kelch_6 PF13964.6 BAM42016.1 - 0.0023 18.2 7.0 0.24 11.8 0.9 4.6 5 0 0 5 5 5 1 Kelch motif RAG2 PF03089.14 BAM42016.1 - 0.0061 15.6 0.2 0.035 13.1 0.0 2.3 3 1 0 3 3 3 1 Recombination activating protein 2 PTP_tm PF18861.1 BAM42016.1 - 0.034 14.1 0.2 0.077 13.0 0.2 1.5 1 0 0 1 1 1 0 Transmembrane domain of protein tyrosine phosphatase, receptor type J DHFR_1 PF00186.19 BAM42016.1 - 0.057 13.1 0.0 0.14 11.8 0.0 1.7 1 0 0 1 1 1 0 Dihydrofolate reductase Kelch_1 PF01344.25 BAM42016.1 - 0.16 11.6 7.0 0.059 13.0 2.1 2.7 3 0 0 3 3 3 0 Kelch motif Mannosyl_trans PF05007.13 BAM42019.1 - 1.6e-54 185.5 37.1 1.6e-54 185.5 37.1 2.0 2 0 0 2 2 2 1 Mannosyltransferase (PIG-M) PIG-U PF06728.13 BAM42019.1 - 0.00016 20.9 49.0 0.00016 20.9 49.0 1.8 2 1 1 3 3 3 1 GPI transamidase subunit PIG-U GT87 PF09594.10 BAM42019.1 - 0.00038 20.3 2.6 0.00038 20.3 2.6 2.8 2 1 1 3 3 3 1 Glycosyltransferase family 87 TMF_TATA_bd PF12325.8 BAM42020.1 - 1.3 9.3 4.9 8.4 6.7 0.5 2.5 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding Fib_alpha PF08702.10 BAM42020.1 - 2 8.6 8.2 2.4 8.3 0.8 2.8 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family zf-UBR PF02207.20 BAM42023.1 - 5.3e-14 52.1 14.5 5.3e-14 52.1 14.5 3.2 3 0 0 3 3 3 1 Putative zinc finger in N-recognin (UBR box) zf-RING_5 PF14634.6 BAM42023.1 - 0.01 15.8 0.6 0.01 15.8 0.6 3.3 4 0 0 4 4 4 0 zinc-RING finger domain Pkinase PF00069.25 BAM42024.1 - 5.2e-76 255.5 2.2 1.2e-75 254.3 0.5 2.1 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM42024.1 - 3.8e-41 141.1 0.1 7.8e-41 140.1 0.1 1.5 1 0 0 1 1 1 1 Protein tyrosine kinase PH PF00169.29 BAM42024.1 - 4.2e-14 52.9 0.1 4.2e-14 52.9 0.1 3.0 3 0 0 3 3 3 1 PH domain Kinase-like PF14531.6 BAM42024.1 - 5.2e-10 39.1 0.2 4.4e-08 32.8 0.0 2.6 2 1 1 3 3 3 1 Kinase-like EF-hand_6 PF13405.6 BAM42024.1 - 2.1e-09 36.6 3.1 0.00078 19.2 0.1 4.3 3 0 0 3 3 3 2 EF-hand domain EF-hand_1 PF00036.32 BAM42024.1 - 6e-07 28.6 10.9 0.065 12.8 0.2 4.5 4 0 0 4 4 4 3 EF hand RIO1 PF01163.22 BAM42024.1 - 1.2e-06 28.2 1.7 2.2e-05 24.1 0.2 2.7 2 0 0 2 2 2 1 RIO1 family EF-hand_7 PF13499.6 BAM42024.1 - 3.1e-06 27.5 5.3 0.089 13.2 0.1 4.2 3 0 0 3 3 3 2 EF-hand domain pair Kdo PF06293.14 BAM42024.1 - 2e-05 24.1 0.4 6.6e-05 22.4 0.4 1.9 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 BAM42024.1 - 0.00012 21.0 0.1 0.0034 16.2 0.0 2.7 2 0 0 2 2 2 1 Fungal protein kinase EF-hand_8 PF13833.6 BAM42024.1 - 0.00015 21.5 8.1 0.011 15.5 0.0 4.1 5 0 0 5 5 4 2 EF-hand domain pair FTA2 PF13095.6 BAM42024.1 - 0.00035 20.3 0.4 0.079 12.6 0.0 2.6 1 1 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 EF-hand_5 PF13202.6 BAM42024.1 - 0.0038 16.7 3.6 1 8.9 0.1 3.3 3 0 0 3 3 3 2 EF hand APH PF01636.23 BAM42024.1 - 0.01 15.8 0.0 0.23 11.4 0.0 2.1 1 1 1 2 2 2 0 Phosphotransferase enzyme family RNA_pol_Rpb4 PF03874.16 BAM42024.1 - 0.12 12.7 0.1 0.12 12.7 0.1 3.4 4 0 0 4 4 4 0 RNA polymerase Rpb4 Elf1 PF05129.13 BAM42024.1 - 7.2 6.7 8.3 44 4.2 8.3 2.2 1 1 0 1 1 1 0 Transcription elongation factor Elf1 like Rhodanese_C PF12368.8 BAM42024.1 - 7.9 6.9 14.0 1.2 9.6 2.3 2.9 2 1 1 3 3 2 0 Rhodanase C-terminal phiKZ_IP PF12699.7 BAM42025.1 - 0.045 12.9 0.2 0.068 12.3 0.2 1.2 1 0 0 1 1 1 0 phiKZ-like phage internal head proteins LRR_4 PF12799.7 BAM42025.1 - 0.096 13.1 0.3 0.096 13.1 0.3 7.3 4 3 2 6 6 6 0 Leucine Rich repeats (2 copies) IL4 PF00727.18 BAM42025.1 - 1.4 9.2 4.2 2.2 8.6 0.3 2.8 2 1 1 3 3 3 0 Interleukin 4 LRR_6 PF13516.6 BAM42025.1 - 2.4 8.4 10.5 11 6.3 0.0 5.9 7 0 0 7 7 7 0 Leucine Rich repeat zf-C3HC4_2 PF13923.6 BAM42026.1 - 1.3e-10 40.9 10.9 2.3e-10 40.1 10.9 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_4 PF15227.6 BAM42026.1 - 5.5e-10 39.2 7.7 2.3e-09 37.3 7.9 1.9 1 1 0 1 1 1 1 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 BAM42026.1 - 2.8e-09 36.8 10.4 7.1e-09 35.5 5.2 2.4 2 0 0 2 2 2 1 RING-type zinc-finger zf-RING_2 PF13639.6 BAM42026.1 - 2.7e-08 34.0 9.6 4.7e-08 33.2 9.6 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4 PF00097.25 BAM42026.1 - 1.9e-07 30.8 11.4 3.5e-07 30.0 11.4 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_5 PF14634.6 BAM42026.1 - 4e-07 29.9 8.9 7.6e-07 29.0 8.9 1.5 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4_3 PF13920.6 BAM42026.1 - 4.5e-07 29.6 7.3 7.7e-07 28.9 7.3 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) U-box PF04564.15 BAM42026.1 - 1.9e-06 27.9 0.1 4.6e-06 26.7 0.1 1.7 1 0 0 1 1 1 1 U-box domain zf-RING_10 PF16685.5 BAM42026.1 - 3.6e-06 27.0 5.2 8.4e-06 25.8 5.2 1.6 1 0 0 1 1 1 1 zinc RING finger of MSL2 Prok-RING_4 PF14447.6 BAM42026.1 - 0.00024 20.9 10.4 0.00093 19.0 10.5 1.8 1 1 1 2 2 2 1 Prokaryotic RING finger family 4 zf-rbx1 PF12678.7 BAM42026.1 - 0.0028 17.9 9.5 0.0083 16.4 9.5 1.8 1 1 0 1 1 1 1 RING-H2 zinc finger domain zf-RING_6 PF14835.6 BAM42026.1 - 0.014 15.2 3.0 0.032 14.1 3.0 1.5 1 0 0 1 1 1 0 zf-RING of BARD1-type protein DASH_Dam1 PF08653.10 BAM42026.1 - 0.041 13.7 0.1 0.24 11.2 0.1 2.3 1 1 0 1 1 1 0 DASH complex subunit Dam1 zf-Nse PF11789.8 BAM42026.1 - 0.053 13.4 9.3 0.13 12.1 9.3 1.6 1 0 0 1 1 1 0 Zinc-finger of the MIZ type in Nse subunit FapA PF03961.13 BAM42026.1 - 0.19 10.3 0.0 0.28 9.8 0.0 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A zf-P11 PF03854.14 BAM42026.1 - 0.63 9.7 9.0 2.3 7.9 9.0 1.9 1 1 0 1 1 1 0 P-11 zinc finger Zn-C2H2_12 PF18112.1 BAM42026.1 - 0.89 10.1 3.2 9.4 6.8 0.1 2.7 2 0 0 2 2 2 0 Autophagy receptor zinc finger-C2H2 domain zf-RING_4 PF14570.6 BAM42026.1 - 2.2 8.1 8.6 11 5.9 8.9 2.0 1 1 1 2 2 2 0 RING/Ubox like zinc-binding domain GTP_EFTU PF00009.27 BAM42027.1 - 2e-36 125.4 0.0 3.3e-36 124.7 0.0 1.3 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain PAM2 PF07145.15 BAM42027.1 - 0.0013 18.2 3.4 0.0031 17.1 3.4 1.7 1 0 0 1 1 1 1 Ataxin-2 C-terminal region MMR_HSR1 PF01926.23 BAM42027.1 - 0.0016 18.5 0.0 0.013 15.6 0.0 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D3 PF03143.17 BAM42028.1 - 2.9e-18 66.2 0.0 3.2e-18 66.1 0.0 1.0 1 0 0 1 1 1 1 Elongation factor Tu C-terminal domain YpjP PF14005.6 BAM42029.1 - 0.0025 17.9 0.2 0.0041 17.2 0.2 1.4 1 0 0 1 1 1 1 YpjP-like protein Ribosomal_L37 PF08561.10 BAM42029.1 - 0.0069 16.9 4.6 0.0069 16.9 4.6 2.8 1 1 2 3 3 3 2 Mitochondrial ribosomal protein L37 RAP PF08373.10 BAM42030.1 - 1.4e-13 50.7 1.2 4.7e-13 49.0 1.2 2.0 1 0 0 1 1 1 1 RAP domain MCM PF00493.23 BAM42031.1 - 6.5e-49 166.0 0.2 8.6e-45 152.6 0.3 2.7 2 1 0 2 2 2 2 MCM P-loop domain MCM_lid PF17855.1 BAM42031.1 - 8.5e-17 61.4 0.0 2.1e-16 60.1 0.0 1.7 1 0 0 1 1 1 1 MCM AAA-lid domain Mg_chelatase PF01078.21 BAM42031.1 - 4.8e-10 39.2 0.2 2.3e-07 30.4 0.1 2.3 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI Sigma54_activat PF00158.26 BAM42031.1 - 0.0001 22.1 0.0 0.00067 19.4 0.0 2.0 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_5 PF07728.14 BAM42031.1 - 0.00014 21.9 0.0 0.00032 20.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) MCM_OB PF17207.3 BAM42031.1 - 0.0011 18.8 0.2 0.0036 17.2 0.2 1.9 1 0 0 1 1 1 1 MCM OB domain AAA_10 PF12846.7 BAM42031.1 - 0.0029 16.6 0.0 0.005 15.8 0.0 1.3 1 0 0 1 1 1 1 AAA-like domain IstB_IS21 PF01695.17 BAM42031.1 - 0.036 13.8 0.1 0.18 11.5 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_16 PF13191.6 BAM42031.1 - 0.041 14.2 0.0 0.11 12.9 0.0 1.7 1 0 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 BAM42031.1 - 0.068 12.9 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 BAM42031.1 - 0.11 11.6 0.1 0.31 10.2 0.0 1.7 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_22 PF13401.6 BAM42031.1 - 0.17 12.1 0.1 0.48 10.7 0.1 1.7 1 0 0 1 1 1 0 AAA domain AAA_18 PF13238.6 BAM42031.1 - 0.24 12.0 0.9 0.89 10.1 0.1 2.4 3 0 0 3 3 2 0 AAA domain Hat1_N PF10394.9 BAM42032.1 - 3.6e-05 24.1 9.5 0.0066 16.7 0.5 3.2 4 0 0 4 4 4 2 Histone acetyl transferase HAT1 N-terminus Tau95_N PF17682.1 BAM42032.1 - 0.054 13.7 1.0 0.11 12.6 1.0 1.5 1 0 0 1 1 1 0 Tau95 Triple barrel domain Myb_DNA-binding PF00249.31 BAM42033.1 - 1.3e-07 31.7 0.0 0.0038 17.4 0.0 2.6 2 0 0 2 2 2 2 Myb-like DNA-binding domain DUF3199 PF11436.8 BAM42033.1 - 0.077 13.0 1.3 0.27 11.3 1.3 1.9 1 0 0 1 1 1 0 Protein of unknown function (DUF3199) Myb_DNA-bind_6 PF13921.6 BAM42033.1 - 0.31 11.3 1.4 3.4 8.0 0.1 2.8 2 0 0 2 2 2 0 Myb-like DNA-binding domain Pkinase PF00069.25 BAM42034.1 - 4.2e-35 121.4 0.0 8e-35 120.5 0.0 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM42034.1 - 1.3e-17 63.9 0.0 1.6e-16 60.4 0.0 2.2 1 1 0 1 1 1 1 Protein tyrosine kinase NYD-SP28 PF14772.6 BAM42034.1 - 0.41 10.7 0.0 0.41 10.7 0.0 2.8 3 1 0 3 3 3 0 Sperm tail DUF1043 PF06295.12 BAM42035.1 - 0.013 15.5 0.2 0.042 13.9 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1043) DUF4504 PF14953.6 BAM42035.1 - 0.027 13.9 0.0 0.031 13.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4504) LapA_dom PF06305.11 BAM42035.1 - 0.062 13.1 0.0 0.11 12.3 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Thymidylat_synt PF00303.19 BAM42036.1 - 2.7e-111 371.0 0.0 3.6e-111 370.6 0.0 1.1 1 0 0 1 1 1 1 Thymidylate synthase DHFR_1 PF00186.19 BAM42036.1 - 5e-24 84.8 0.0 1.9e-23 82.9 0.0 1.8 1 1 0 1 1 1 1 Dihydrofolate reductase RNase_PH_C PF03725.15 BAM42038.1 - 0.031 14.3 0.0 0.086 12.9 0.0 1.8 1 0 0 1 1 1 0 3' exoribonuclease family, domain 2 FAD_binding_9 PF08021.11 BAM42038.1 - 0.055 13.7 0.0 0.16 12.2 0.0 1.7 1 0 0 1 1 1 0 Siderophore-interacting FAD-binding domain RQC PF09382.10 BAM42040.1 - 2.8e-17 62.5 0.2 1.5e-16 60.2 0.1 2.3 2 0 0 2 2 2 1 RQC domain Helicase_C PF00271.31 BAM42040.1 - 2.9e-17 63.0 0.0 9.3e-16 58.2 0.0 2.7 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 BAM42040.1 - 2.9e-17 63.0 0.0 7.3e-17 61.7 0.0 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase RecQ_Zn_bind PF16124.5 BAM42040.1 - 4.1e-09 37.0 6.4 4.1e-09 37.0 6.4 3.3 3 0 0 3 3 3 1 RecQ zinc-binding ResIII PF04851.15 BAM42040.1 - 1.6e-08 34.7 0.2 6.8e-08 32.7 0.0 2.0 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DUF249 PF03158.13 BAM42040.1 - 0.1 12.3 0.0 0.29 10.8 0.0 1.8 1 0 0 1 1 1 0 Multigene family 530 protein AAA_23 PF13476.6 BAM42041.1 - 3e-14 54.0 0.1 3e-14 54.0 0.1 5.0 3 1 1 4 4 4 1 AAA domain SMC_N PF02463.19 BAM42041.1 - 1.7e-06 27.7 38.4 4.9e-05 22.9 38.4 3.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 BAM42041.1 - 0.00057 19.6 0.0 0.0015 18.2 0.0 1.7 2 0 0 2 2 2 1 P-loop containing region of AAA domain Tropomyosin_1 PF12718.7 BAM42041.1 - 0.004 17.3 1.1 0.004 17.3 1.1 6.7 5 2 1 6 6 6 2 Tropomyosin like AAA_21 PF13304.6 BAM42041.1 - 2.9 7.6 0.0 2.9 7.6 0.0 4.8 4 1 1 5 5 5 0 AAA domain, putative AbiEii toxin, Type IV TA system DUF1617 PF07761.12 BAM42042.1 - 0.0083 16.2 0.7 0.0083 16.2 0.7 2.4 2 0 0 2 2 2 1 Protein of unknown function (DUF1617) DUF4446 PF14584.6 BAM42042.1 - 0.16 12.0 2.4 0.82 9.6 0.0 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) TRAP_alpha PF03896.16 BAM42042.1 - 0.17 11.1 5.0 0.39 9.9 5.0 1.6 1 0 0 1 1 1 0 Translocon-associated protein (TRAP), alpha subunit PH PF00169.29 BAM42042.1 - 0.2 12.2 4.8 0.18 12.4 0.6 3.1 2 1 1 3 3 3 0 PH domain Zip PF02535.22 BAM42042.1 - 0.33 10.1 3.0 0.6 9.3 3.0 1.5 1 0 0 1 1 1 0 ZIP Zinc transporter CDC45 PF02724.14 BAM42042.1 - 1.9 6.7 15.7 2.7 6.2 15.7 1.2 1 0 0 1 1 1 0 CDC45-like protein Presenilin PF01080.17 BAM42042.1 - 7.9 5.1 8.7 12 4.5 8.7 1.4 1 0 0 1 1 1 0 Presenilin Pet191_N PF10203.9 BAM42043.1 - 3.1e-16 59.4 6.7 5.8e-16 58.5 6.7 1.5 1 0 0 1 1 1 1 Cytochrome c oxidase assembly protein PET191 CX9C PF16860.5 BAM42043.1 - 0.13 12.3 7.3 0.9 9.6 1.5 2.4 1 1 1 2 2 2 0 CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, Cmc1 PF08583.10 BAM42043.1 - 2.3 8.3 8.0 9 6.4 1.4 2.5 1 1 1 2 2 2 0 Cytochrome c oxidase biogenesis protein Cmc1 like Kri1_C PF12936.7 BAM42044.1 - 8.2e-15 54.8 0.5 8.2e-15 54.8 0.5 4.4 4 0 0 4 4 4 1 KRI1-like family C-terminal Kri1 PF05178.12 BAM42044.1 - 7.3e-12 45.8 4.2 7.3e-12 45.8 4.2 4.6 3 2 0 4 4 4 1 KRI1-like family ZZ PF00569.17 BAM42044.1 - 8.6e-05 22.3 6.4 0.00018 21.2 6.4 1.5 1 0 0 1 1 1 1 Zinc finger, ZZ type zf-UBR PF02207.20 BAM42044.1 - 0.00061 19.9 3.9 0.0012 18.9 3.9 1.4 1 0 0 1 1 1 1 Putative zinc finger in N-recognin (UBR box) Ribosomal_S2 PF00318.20 BAM42044.1 - 0.19 10.9 1.6 0.35 10.1 0.0 2.1 1 1 1 2 2 2 0 Ribosomal protein S2 RRM_1 PF00076.22 BAM42045.1 - 0.00032 20.5 0.3 0.14 11.9 0.0 3.2 3 0 0 3 3 3 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Peptidase_M41 PF01434.18 BAM42046.1 - 2.1e-51 174.5 1.2 4e-51 173.6 1.2 1.4 1 0 0 1 1 1 1 Peptidase family M41 AAA PF00004.29 BAM42046.1 - 9.3e-41 139.3 0.1 4.7e-40 137.1 0.0 2.3 3 0 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 BAM42046.1 - 2.5e-07 30.4 0.2 5.9e-07 29.2 0.2 1.7 1 0 0 1 1 1 1 AAA+ lid domain TIP49 PF06068.13 BAM42046.1 - 3e-05 23.4 0.1 0.00033 20.0 0.0 2.2 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_22 PF13401.6 BAM42046.1 - 0.00014 22.2 0.1 0.085 13.1 0.0 3.6 2 1 1 3 3 3 1 AAA domain RuvB_N PF05496.12 BAM42046.1 - 0.00039 20.2 0.0 0.0012 18.6 0.0 1.9 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 BAM42046.1 - 0.00059 20.3 0.2 0.014 15.8 0.1 2.5 1 1 1 2 2 2 1 AAA ATPase domain AAA_18 PF13238.6 BAM42046.1 - 0.0034 17.9 0.1 0.017 15.7 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.14 BAM42046.1 - 0.0043 17.1 0.1 0.027 14.5 0.1 2.4 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 BAM42046.1 - 0.007 15.7 0.1 0.021 14.1 0.1 1.8 1 0 0 1 1 1 1 Zeta toxin AAA_28 PF13521.6 BAM42046.1 - 0.0085 16.3 0.1 0.041 14.1 0.1 2.0 2 0 0 2 2 2 1 AAA domain IstB_IS21 PF01695.17 BAM42046.1 - 0.0099 15.6 0.2 0.046 13.5 0.0 2.1 2 0 0 2 2 2 1 IstB-like ATP binding protein TsaE PF02367.17 BAM42046.1 - 0.014 15.4 0.0 0.037 14.0 0.0 1.7 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_33 PF13671.6 BAM42046.1 - 0.022 14.9 0.0 0.15 12.2 0.0 2.2 2 0 0 2 2 2 0 AAA domain AAA_2 PF07724.14 BAM42046.1 - 0.032 14.4 0.0 0.13 12.4 0.0 2.0 1 1 0 1 1 1 0 AAA domain (Cdc48 subfamily) AAA_24 PF13479.6 BAM42046.1 - 0.033 13.9 0.2 2.5 7.8 0.0 2.9 3 0 0 3 3 3 0 AAA domain Reprolysin_3 PF13582.6 BAM42046.1 - 0.035 14.6 0.0 0.085 13.4 0.0 1.6 1 0 0 1 1 1 0 Metallo-peptidase family M12B Reprolysin-like AAA_25 PF13481.6 BAM42046.1 - 0.04 13.5 0.7 0.61 9.6 0.2 2.3 1 1 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 BAM42046.1 - 0.089 12.2 0.1 0.18 11.1 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI XhlA PF10779.9 BAM42046.1 - 0.15 12.3 2.4 0.38 11.0 0.2 2.6 2 0 0 2 2 2 0 Haemolysin XhlA NACHT PF05729.12 BAM42046.1 - 0.16 11.9 0.0 0.42 10.5 0.0 1.7 1 0 0 1 1 1 0 NACHT domain Ribosomal_L6e PF01159.19 BAM42047.1 - 1.1e-26 93.6 1.5 2.6e-26 92.3 1.5 1.6 1 1 0 1 1 1 1 Ribosomal protein L6e EF1G PF00647.19 BAM42048.1 - 2.5e-34 117.6 0.0 5.3e-34 116.5 0.0 1.6 1 0 0 1 1 1 1 Elongation factor 1 gamma, conserved domain GST_C PF00043.25 BAM42048.1 - 0.00096 19.3 0.1 0.0022 18.2 0.1 1.6 1 0 0 1 1 1 1 Glutathione S-transferase, C-terminal domain GST_C_3 PF14497.6 BAM42048.1 - 0.0047 17.1 1.1 0.014 15.6 0.3 2.1 2 0 0 2 2 2 1 Glutathione S-transferase, C-terminal domain SprT-like PF10263.9 BAM42049.1 - 2.2e-27 95.2 0.2 3.7e-27 94.4 0.2 1.4 1 0 0 1 1 1 1 SprT-like family Peptidase_M76 PF09768.9 BAM42049.1 - 0.17 11.6 0.6 0.31 10.8 0.0 1.7 2 0 0 2 2 2 0 Peptidase M76 family DUF150_C PF17384.2 BAM42050.1 - 0.099 12.8 0.0 0.26 11.4 0.0 1.7 1 0 0 1 1 1 0 RimP C-terminal SH3 domain Exonuc_VII_S PF02609.16 BAM42052.1 - 0.098 12.7 2.4 0.94 9.6 0.1 2.5 2 1 0 2 2 2 0 Exonuclease VII small subunit Bac_small_YrzI PF09501.10 BAM42052.1 - 0.53 10.5 1.8 7.8 6.7 0.2 2.5 2 0 0 2 2 2 0 Probable sporulation protein (Bac_small_yrzI) WD40 PF00400.32 BAM42053.1 - 1.2e-33 114.6 24.2 1.3e-06 29.0 0.2 11.3 11 1 0 11 11 11 7 WD domain, G-beta repeat Utp12 PF04003.12 BAM42053.1 - 3.4e-18 65.9 1.1 6.7e-18 65.0 0.4 1.9 2 0 0 2 2 2 1 Dip2/Utp12 Family ANAPC4_WD40 PF12894.7 BAM42053.1 - 4.1e-13 49.4 7.5 0.28 11.5 0.0 9.3 7 3 3 10 10 10 4 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 BAM42053.1 - 4.6e-09 35.7 1.0 0.0086 15.1 0.0 5.6 5 1 0 5 5 5 3 WD40 region of Ge1, enhancer of mRNA-decapping protein eIF2A PF08662.11 BAM42053.1 - 5.9e-06 26.3 6.1 0.52 10.2 0.0 6.0 5 1 2 7 7 7 3 Eukaryotic translation initiation factor eIF2A DUF1513 PF07433.11 BAM42053.1 - 0.0026 16.9 1.3 2.4 7.1 0.1 4.2 4 0 0 4 4 4 1 Protein of unknown function (DUF1513) PD40 PF07676.12 BAM42053.1 - 0.042 13.8 0.4 4 7.5 0.0 4.1 5 0 0 5 5 5 0 WD40-like Beta Propeller Repeat PQQ_3 PF13570.6 BAM42053.1 - 4.5 7.9 5.7 14 6.4 0.0 4.2 4 0 0 4 4 4 0 PQQ-like domain OHA PF14418.6 BAM42056.1 - 2.3e-19 69.0 0.0 4.5e-19 68.0 0.0 1.4 1 0 0 1 1 1 1 OST-HTH Associated domain Arm PF00514.23 BAM42057.1 - 4e-07 29.8 3.3 0.014 15.4 0.1 5.6 5 0 0 5 5 5 1 Armadillo/beta-catenin-like repeat TPR_1 PF00515.28 BAM42057.1 - 0.00074 19.2 4.3 0.62 10.0 0.0 3.8 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_2 PF07719.17 BAM42057.1 - 0.0065 16.5 0.7 2.8 8.3 0.1 3.2 3 0 0 3 3 3 1 Tetratricopeptide repeat TPR_12 PF13424.6 BAM42057.1 - 0.0073 16.6 0.1 0.27 11.6 0.1 3.1 1 1 0 1 1 1 1 Tetratricopeptide repeat HEAT_2 PF13646.6 BAM42057.1 - 0.018 15.4 0.3 0.89 10.0 0.0 3.1 3 0 0 3 3 3 0 HEAT repeats UME PF08064.13 BAM42057.1 - 0.058 13.3 1.1 16 5.5 0.0 3.6 3 0 0 3 3 3 0 UME (NUC010) domain DUF4819 PF16090.5 BAM42057.1 - 0.095 12.8 0.1 1 9.5 0.0 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4819) TPR_8 PF13181.6 BAM42057.1 - 0.13 12.6 1.4 6.3 7.3 0.7 2.9 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_17 PF13431.6 BAM42057.1 - 0.79 10.2 2.7 2.4 8.8 0.7 2.7 2 0 0 2 2 2 0 Tetratricopeptide repeat ABA_GPCR PF12430.8 BAM42058.1 - 2.8e-18 66.3 8.9 5.5e-18 65.4 8.9 1.5 1 0 0 1 1 1 1 Abscisic acid G-protein coupled receptor Ribosomal_S6 PF01250.17 BAM42059.1 - 4.7e-11 42.8 0.0 5.8e-11 42.5 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S6 Ribosomal_L44 PF00935.19 BAM42060.1 - 7.3e-34 116.1 15.3 1.1e-33 115.5 15.3 1.3 1 0 0 1 1 1 1 Ribosomal protein L44 Peptidase_C14 PF00656.22 BAM42061.1 - 1.9e-24 87.0 0.0 3.5e-24 86.1 0.0 1.5 1 0 0 1 1 1 1 Caspase domain RHD3 PF05879.12 BAM42062.1 - 5.9e-98 328.9 10.9 8.6e-98 328.4 10.9 1.2 1 0 0 1 1 1 1 Root hair defective 3 GTP-binding protein (RHD3) GBP PF02263.19 BAM42062.1 - 5.9e-10 38.8 0.4 5.9e-10 38.8 0.4 2.3 2 0 0 2 2 2 1 Guanylate-binding protein, N-terminal domain MMR_HSR1 PF01926.23 BAM42062.1 - 0.0048 17.0 0.0 0.014 15.5 0.0 1.8 1 0 0 1 1 1 1 50S ribosome-binding GTPase Dynamin_N PF00350.23 BAM42062.1 - 0.012 15.7 0.6 0.034 14.2 0.6 1.8 1 0 0 1 1 1 0 Dynamin family Septin PF00735.18 BAM42062.1 - 0.023 14.0 0.8 0.039 13.2 0.0 1.8 2 0 0 2 2 2 0 Septin Roc PF08477.13 BAM42062.1 - 0.11 12.7 0.0 0.28 11.4 0.0 1.7 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase zf-HIT PF04438.16 BAM42063.1 - 2.2e-12 46.6 7.8 4.4e-12 45.6 7.8 1.6 1 0 0 1 1 1 1 HIT zinc finger zf-MYND PF01753.18 BAM42063.1 - 0.18 11.9 6.5 0.089 12.9 3.7 2.0 2 1 0 2 2 2 0 MYND finger RrnaAD PF00398.20 BAM42064.1 - 1.2e-54 185.2 0.0 1.6e-54 184.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 BAM42064.1 - 5.6e-10 39.8 0.0 1.1e-09 38.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAM42064.1 - 5.6e-08 32.7 0.0 1e-07 31.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 BAM42064.1 - 1.5e-06 28.8 0.0 3e-06 27.8 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 BAM42064.1 - 3.2e-06 26.6 0.0 5.5e-06 25.9 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_4 PF02390.17 BAM42064.1 - 0.00014 21.4 0.0 0.00023 20.7 0.0 1.3 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_12 PF08242.12 BAM42064.1 - 0.00034 21.3 0.0 0.00061 20.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain DREV PF05219.12 BAM42064.1 - 0.00056 19.1 0.0 0.00089 18.4 0.0 1.3 1 0 0 1 1 1 1 DREV methyltransferase MTS PF05175.14 BAM42064.1 - 0.00097 18.7 0.0 0.0021 17.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain NodS PF05401.11 BAM42064.1 - 0.0021 17.7 0.0 0.0033 17.1 0.0 1.2 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_23 PF13489.6 BAM42064.1 - 0.0021 17.9 0.0 0.0034 17.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain DUF43 PF01861.16 BAM42064.1 - 0.0032 16.7 0.0 0.0052 16.0 0.0 1.2 1 0 0 1 1 1 1 Branched-chain polyamine synthase A C-terminal domain PCMT PF01135.19 BAM42064.1 - 0.0039 17.0 0.0 0.0066 16.2 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Spermine_synth PF01564.17 BAM42064.1 - 0.029 13.8 0.0 0.051 13.0 0.0 1.4 1 0 0 1 1 1 0 Spermine/spermidine synthase domain PrmA PF06325.13 BAM42064.1 - 0.061 12.7 0.0 0.094 12.1 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) UPF0020 PF01170.18 BAM42064.1 - 0.094 12.4 0.0 0.17 11.5 0.0 1.4 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 HEAT PF02985.22 BAM42065.1 - 3.3e-21 73.5 9.3 0.0038 17.4 0.1 8.8 8 0 0 8 8 8 6 HEAT repeat HEAT_2 PF13646.6 BAM42065.1 - 1.4e-10 41.4 0.0 0.092 13.1 0.0 5.2 2 1 5 7 7 7 5 HEAT repeats Vac14_Fab1_bd PF12755.7 BAM42065.1 - 6e-10 39.6 16.8 1.9e-05 25.2 0.9 5.9 4 2 3 7 7 7 3 Vacuolar 14 Fab1-binding region Cnd1 PF12717.7 BAM42065.1 - 8.6e-06 25.9 7.3 0.065 13.3 0.3 3.6 3 1 0 3 3 3 2 non-SMC mitotic condensation complex subunit 1 HEAT_EZ PF13513.6 BAM42065.1 - 0.00081 19.8 0.4 12 6.6 0.0 5.3 6 0 0 6 6 6 1 HEAT-like repeat IFRD PF05004.13 BAM42065.1 - 0.021 14.0 2.1 0.25 10.4 0.2 2.8 2 1 0 2 2 2 0 Interferon-related developmental regulator (IFRD) Peptidase_M16_C PF05193.21 BAM42066.1 - 2.8e-21 76.4 5.8 6.7e-11 42.5 0.1 4.7 4 1 0 4 4 4 3 Peptidase M16 inactive domain Peptidase_M16 PF00675.20 BAM42066.1 - 8.6e-19 68.0 2.0 3.1e-18 66.2 0.2 2.4 2 0 0 2 2 2 1 Insulinase (Peptidase family M16) RNA_pol_L_2 PF13656.6 BAM42067.1 - 9.1e-22 76.6 0.3 2.9e-21 75.0 0.3 1.9 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain zf-B_box PF00643.24 BAM42067.1 - 4.5e-07 29.9 16.7 1.8e-06 28.0 2.5 2.8 2 1 0 2 2 2 2 B-box zinc finger RNA_pol_L PF01193.24 BAM42067.1 - 0.00028 20.2 0.0 0.00075 18.9 0.0 1.8 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain DUF3781 PF12636.7 BAM42067.1 - 1.1 9.1 4.4 2.3 8.2 2.8 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3781) tRNA-synt_2 PF00152.20 BAM42068.1 - 2e-40 138.8 3.4 6.8e-40 137.1 3.4 1.8 1 1 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA-synt_2d PF01409.20 BAM42068.1 - 3.9e-06 26.5 0.6 0.013 15.0 0.1 3.0 2 1 1 3 3 3 2 tRNA synthetases class II core domain (F) tRNA_anti-codon PF01336.25 BAM42068.1 - 0.023 14.6 0.0 0.12 12.4 0.0 2.1 2 0 0 2 2 2 0 OB-fold nucleic acid binding domain CheR_N PF03705.15 BAM42068.1 - 0.024 14.4 0.7 0.34 10.7 0.1 2.8 2 0 0 2 2 2 0 CheR methyltransferase, all-alpha domain Prefoldin_2 PF01920.20 BAM42069.1 - 2.7e-10 40.1 0.0 3.1e-10 39.9 0.0 1.1 1 0 0 1 1 1 1 Prefoldin subunit Torus PF16131.5 BAM42072.1 - 1.1e-31 109.7 0.5 1.1e-31 109.7 0.5 2.2 3 0 0 3 3 3 1 Torus domain zf-CCCH_4 PF18044.1 BAM42072.1 - 0.0086 15.9 5.6 0.015 15.0 5.6 1.4 1 0 0 1 1 1 1 CCCH-type zinc finger RRM_1 PF00076.22 BAM42072.1 - 0.043 13.6 0.1 0.15 11.9 0.1 1.9 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) DUF305 PF03713.13 BAM42072.1 - 0.086 13.0 0.2 0.2 11.8 0.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF305) Ub-RnfH PF03658.14 BAM42072.1 - 0.2 12.0 0.7 6.5 7.2 0.0 2.4 2 0 0 2 2 2 0 RnfH family Ubiquitin zf_CCCH_4 PF18345.1 BAM42072.1 - 1 9.5 7.7 2.4 8.3 7.7 1.7 1 0 0 1 1 1 0 Zinc finger domain TIM PF00121.18 BAM42073.1 - 7.9e-62 208.8 0.1 9.8e-62 208.5 0.1 1.0 1 0 0 1 1 1 1 Triosephosphate isomerase CLP1_P PF16575.5 BAM42074.1 - 7.3e-24 84.6 0.1 1.2e-23 83.8 0.1 1.3 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_16 PF13191.6 BAM42074.1 - 0.0019 18.6 0.0 0.0032 17.9 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 BAM42074.1 - 0.017 14.9 0.1 0.048 13.4 0.1 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain CbiA PF01656.23 BAM42074.1 - 0.04 14.0 0.0 0.07 13.2 0.0 1.5 1 0 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_23 PF13476.6 BAM42074.1 - 0.065 13.7 0.0 0.15 12.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 BAM42074.1 - 0.076 12.9 0.0 0.27 11.1 0.0 1.9 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea Rad21_Rec8_N PF04825.13 BAM42075.1 - 0.02 15.0 0.1 0.047 13.9 0.1 1.6 1 0 0 1 1 1 0 N terminus of Rad21 / Rec8 like protein Motile_Sperm PF00635.26 BAM42077.1 - 6.5e-24 83.9 0.3 1.4e-23 82.8 0.2 1.7 1 1 0 1 1 1 1 MSP (Major sperm protein) domain RNA_pol_Rpb6 PF01192.22 BAM42078.1 - 9.8e-17 60.6 0.1 1.6e-16 59.9 0.1 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb6 DUF5102 PF17104.5 BAM42078.1 - 0.052 13.6 0.2 0.11 12.5 0.1 1.5 2 0 0 2 2 2 0 Domain of unknown function (DUF5102) Glyco_transf_56 PF07429.11 BAM42078.1 - 0.21 10.7 0.0 0.26 10.4 0.0 1.1 1 0 0 1 1 1 0 4-alpha-L-fucosyltransferase glycosyl transferase group 56 LNS2 PF08235.13 BAM42079.1 - 3.2e-92 308.1 0.0 4.5e-92 307.6 0.0 1.2 1 0 0 1 1 1 1 LNS2 (Lipin/Ned1/Smp2) Lipin_N PF04571.14 BAM42079.1 - 8.2e-23 80.3 0.0 2.8e-22 78.6 0.0 1.9 1 1 0 1 1 1 1 lipin, N-terminal conserved region Lipin_mid PF16876.5 BAM42079.1 - 5.3e-19 68.2 0.0 1.1e-18 67.2 0.0 1.5 1 0 0 1 1 1 1 Lipin/Ned1/Smp2 multi-domain protein middle domain DHHC PF01529.20 BAM42080.1 - 7.6e-24 84.3 12.2 7.6e-24 84.3 12.2 2.5 2 1 0 2 2 2 1 DHHC palmitoyltransferase Ank_2 PF12796.7 BAM42080.1 - 4.7e-21 75.2 0.0 3e-10 40.6 0.0 2.5 1 1 1 2 2 2 2 Ankyrin repeats (3 copies) Ank_4 PF13637.6 BAM42080.1 - 1.8e-18 66.6 0.2 3.1e-06 27.6 0.0 3.6 2 1 1 3 3 3 3 Ankyrin repeats (many copies) Ank_3 PF13606.6 BAM42080.1 - 2.2e-12 46.0 0.1 0.075 13.6 0.0 5.1 5 0 0 5 5 5 3 Ankyrin repeat Ank_5 PF13857.6 BAM42080.1 - 1.5e-11 44.3 0.0 2.4e-06 27.7 0.0 4.3 2 2 3 5 5 5 4 Ankyrin repeats (many copies) Ank PF00023.30 BAM42080.1 - 1.3e-10 41.3 0.4 0.012 16.0 0.0 4.7 4 0 0 4 4 4 3 Ankyrin repeat GCP_N_terminal PF17681.1 BAM42081.1 - 3.3e-25 89.4 1.5 6.1e-25 88.5 1.5 1.4 1 0 0 1 1 1 1 Gamma tubulin complex component N-terminal GCP_C_terminal PF04130.13 BAM42081.1 - 7.2e-18 65.1 3.1 7.2e-18 65.1 3.1 2.0 2 0 0 2 2 2 1 Gamma tubulin complex component C-terminal Nudc_N PF14050.6 BAM42081.1 - 0.045 13.7 0.2 0.16 12.0 0.2 1.9 1 0 0 1 1 1 0 N-terminal conserved domain of Nudc. YkyA PF10368.9 BAM42081.1 - 0.13 11.9 4.5 0.053 13.2 0.7 2.1 2 0 0 2 2 2 0 Putative cell-wall binding lipoprotein 2-oxoacid_dh PF00198.23 BAM42082.1 - 4e-63 213.0 0.0 5.8e-63 212.5 0.0 1.2 1 0 0 1 1 1 1 2-oxoacid dehydrogenases acyltransferase (catalytic domain) Biotin_lipoyl PF00364.22 BAM42082.1 - 4.6e-20 71.2 1.6 5.3e-20 71.0 0.6 1.6 2 0 0 2 2 2 1 Biotin-requiring enzyme HlyD_D23 PF16576.5 BAM42082.1 - 9.3e-05 21.7 0.0 0.00017 20.9 0.0 1.4 1 0 0 1 1 1 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Biotin_lipoyl_2 PF13533.6 BAM42082.1 - 0.00033 20.4 0.0 0.0008 19.2 0.0 1.6 1 0 0 1 1 1 1 Biotin-lipoyl like GCV_H PF01597.19 BAM42082.1 - 0.023 14.6 0.1 0.049 13.5 0.1 1.5 1 0 0 1 1 1 0 Glycine cleavage H-protein PTS_EIIA_1 PF00358.20 BAM42082.1 - 0.035 13.9 0.2 4.3 7.1 0.0 2.7 2 1 1 3 3 3 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Phage_GP20 PF06810.11 BAM42082.1 - 0.53 10.1 4.0 5.2 6.9 1.9 2.7 2 1 0 2 2 2 0 Phage minor structural protein GP20 IMCp PF12314.8 BAM42083.1 - 7e-29 100.0 105.4 5.4e-18 65.1 44.7 3.9 1 1 3 4 4 4 3 Inner membrane complex protein Pox_G5 PF04599.12 BAM42083.1 - 1.1 8.2 6.8 0.95 8.4 5.5 1.4 1 1 0 1 1 1 0 Poxvirus G5 protein ISK_Channel PF02060.15 BAM42084.1 - 0.95 9.2 3.9 12 5.7 0.0 3.1 3 0 0 3 3 3 0 Slow voltage-gated potassium channel TLD PF07534.16 BAM42085.1 - 5.1e-20 72.1 0.3 1.2e-19 71.0 0.3 1.7 1 0 0 1 1 1 1 TLD RabGAP-TBC PF00566.18 BAM42085.1 - 7.6e-11 42.1 3.5 1.6e-10 41.0 2.9 2.0 2 0 0 2 2 2 1 Rab-GTPase-TBC domain Nucleopor_Nup85 PF07575.13 BAM42085.1 - 0.0024 16.6 0.3 0.0049 15.5 0.3 1.4 1 0 0 1 1 1 1 Nup85 Nucleoporin Rad51 PF08423.11 BAM42086.1 - 1.2e-28 100.1 0.0 1.8e-28 99.5 0.0 1.2 1 0 0 1 1 1 1 Rad51 AAA_25 PF13481.6 BAM42086.1 - 5.6e-09 35.9 0.0 8.6e-09 35.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 BAM42086.1 - 2.7e-08 33.5 0.7 6.6e-08 32.2 0.7 1.6 1 1 0 1 1 1 1 KaiC DnaB_C PF03796.15 BAM42086.1 - 5.2e-06 26.0 0.0 8.9e-06 25.2 0.0 1.3 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain RecA PF00154.21 BAM42086.1 - 0.0001 21.9 0.7 0.00056 19.5 0.0 2.1 2 1 0 2 2 2 1 recA bacterial DNA recombination protein AAA_22 PF13401.6 BAM42086.1 - 0.0016 18.7 0.0 0.0026 18.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain ATPase_2 PF01637.18 BAM42086.1 - 0.0021 18.0 0.1 0.0031 17.5 0.1 1.2 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_24 PF13479.6 BAM42086.1 - 0.0062 16.3 0.2 0.012 15.3 0.2 1.6 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 BAM42086.1 - 0.0073 16.2 0.0 0.033 14.1 0.0 1.9 1 1 0 1 1 1 1 NACHT domain AAA_11 PF13086.6 BAM42086.1 - 0.015 15.1 0.0 0.036 13.8 0.0 1.5 1 1 1 2 2 2 0 AAA domain AAA PF00004.29 BAM42086.1 - 0.025 15.0 0.1 0.089 13.2 0.1 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) RNA_helicase PF00910.22 BAM42086.1 - 0.043 14.2 0.0 0.11 12.9 0.0 1.7 1 0 0 1 1 1 0 RNA helicase AAA_18 PF13238.6 BAM42086.1 - 0.068 13.7 0.1 0.15 12.6 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 BAM42086.1 - 0.086 12.8 0.0 1.5 8.8 0.0 2.2 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 BAM42086.1 - 0.094 12.9 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 BAM42086.1 - 0.1 12.6 0.3 0.24 11.4 0.0 1.7 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DAP3 PF10236.9 BAM42087.1 - 0.14 11.3 0.0 0.21 10.7 0.0 1.3 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 DIX PF00778.17 BAM42088.1 - 5.4e-08 32.6 0.0 7.5e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 DIX domain DUF966 PF06136.13 BAM42088.1 - 0.061 13.0 0.0 0.067 12.9 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF966) Fumble PF03630.14 BAM42089.1 - 8.4e-55 186.2 0.4 8.4e-55 186.2 0.4 1.9 2 0 0 2 2 2 1 Fumble F-box-like_2 PF13013.6 BAM42089.1 - 0.16 11.9 0.2 0.6 10.1 0.2 2.0 1 1 0 1 1 1 0 F-box-like domain zf-CCCH PF00642.24 BAM42092.1 - 1.5e-08 34.4 19.9 3.6e-06 26.7 2.1 3.9 3 1 0 3 3 3 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 BAM42092.1 - 3e-07 30.3 25.1 7.9e-06 25.7 7.0 4.5 3 1 0 3 3 3 2 Zinc finger domain Torus PF16131.5 BAM42092.1 - 0.00063 20.4 21.1 0.027 15.2 5.4 3.4 1 1 2 3 3 3 3 Torus domain zf-CCCH_3 PF15663.5 BAM42092.1 - 0.001 19.3 14.8 0.0027 17.9 13.7 2.2 1 1 0 1 1 1 1 Zinc-finger containing family zf-CCCH_4 PF18044.1 BAM42092.1 - 0.0019 17.9 3.4 0.0019 17.9 3.4 4.3 4 0 0 4 4 4 1 CCCH-type zinc finger zf-CCCH_2 PF14608.6 BAM42092.1 - 0.088 13.3 2.6 0.088 13.3 2.6 3.7 3 0 0 3 3 3 0 RNA-binding, Nab2-type zinc finger zf-C2H2_jaz PF12171.8 BAM42093.1 - 1.9e-05 24.8 1.3 1.9e-05 24.8 1.3 1.9 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-met PF12874.7 BAM42093.1 - 0.0012 19.1 0.9 0.0049 17.2 0.3 2.2 2 0 0 2 2 2 1 Zinc-finger of C2H2 type Wbp11 PF09429.10 BAM42093.1 - 0.0031 17.9 1.2 0.0061 16.9 0.1 1.8 2 0 0 2 2 2 1 WW domain binding protein 11 zf-U1 PF06220.12 BAM42093.1 - 0.011 15.5 0.3 0.028 14.2 0.3 1.7 1 0 0 1 1 1 0 U1 zinc finger zf-C2H2_2 PF12756.7 BAM42093.1 - 0.063 13.6 0.4 0.063 13.6 0.4 1.8 1 1 0 2 2 2 0 C2H2 type zinc-finger (2 copies) zf-C2H2_4 PF13894.6 BAM42093.1 - 0.064 14.1 0.2 0.064 14.1 0.2 2.2 2 1 0 2 2 2 0 C2H2-type zinc finger JAB PF01398.21 BAM42094.1 - 2.5e-06 27.5 0.0 4.3e-06 26.7 0.0 1.3 1 0 0 1 1 1 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease MitMem_reg PF13012.6 BAM42094.1 - 3.4e-05 24.2 0.2 5.6e-05 23.5 0.2 1.4 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function LRR_5 PF13306.6 BAM42094.1 - 0.041 13.8 0.2 0.15 12.0 0.1 2.0 2 0 0 2 2 2 0 BspA type Leucine rich repeat region (6 copies) DUF1657 PF07870.11 BAM42095.1 - 0.043 13.7 0.0 0.089 12.7 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1657) CAF1C_H4-bd PF12265.8 BAM42095.1 - 0.11 12.7 0.0 0.31 11.3 0.0 1.7 1 0 0 1 1 1 0 Histone-binding protein RBBP4 or subunit C of CAF1 complex ATP-synt_ab PF00006.25 BAM42097.1 - 4e-65 219.5 0.0 5.4e-65 219.0 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 BAM42097.1 - 3e-12 46.9 0.9 5.3e-12 46.1 0.9 1.4 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain UPF0242 PF06785.11 BAM42099.1 - 0.00017 21.8 32.5 0.00017 21.8 32.5 6.4 2 1 3 6 6 6 1 Uncharacterised protein family (UPF0242) N-terminus PCI PF01399.27 BAM42100.1 - 2e-17 63.6 0.2 5e-17 62.3 0.2 1.7 1 0 0 1 1 1 1 PCI domain Rpn3_C PF08375.11 BAM42100.1 - 2.3e-17 63.2 0.2 7.2e-17 61.6 0.2 1.8 1 0 0 1 1 1 1 Proteasome regulatory subunit C-terminal CSN8_PSD8_EIF3K PF10075.9 BAM42100.1 - 0.0062 16.5 0.2 0.03 14.3 0.0 2.3 2 0 0 2 2 2 1 CSN8/PSMD8/EIF3K family Phage_term_smal PF05944.12 BAM42100.1 - 0.034 14.1 0.0 0.067 13.2 0.0 1.5 1 0 0 1 1 1 0 Phage small terminase subunit TPR_2 PF07719.17 BAM42100.1 - 0.58 10.4 6.7 2.4 8.5 0.4 3.4 3 0 0 3 3 3 0 Tetratricopeptide repeat ANAPC3 PF12895.7 BAM42100.1 - 0.7 10.2 5.8 2.1 8.6 1.3 2.6 2 0 0 2 2 2 0 Anaphase-promoting complex, cyclosome, subunit 3 CAMP_factor PF07373.11 BAM42101.1 - 0.014 15.1 2.7 1.8 8.1 0.0 2.7 3 0 0 3 3 3 0 CAMP factor (Cfa) LPD14 PF18827.1 BAM42101.1 - 0.095 13.0 0.1 0.28 11.5 0.1 1.7 1 0 0 1 1 1 0 Large polyvalent protein-associated domain 14 SlyX PF04102.12 BAM42101.1 - 0.14 12.8 5.4 0.59 10.8 2.2 2.9 2 0 0 2 2 2 0 SlyX Spc7 PF08317.11 BAM42101.1 - 0.22 10.3 18.4 0.15 10.9 15.7 2.0 1 1 0 1 1 1 0 Spc7 kinetochore protein DUF5129 PF17173.4 BAM42101.1 - 0.73 8.9 5.2 1.3 8.1 5.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5129) RNA_pol_Rpb1_1 PF04997.12 BAM42101.1 - 2 7.7 8.0 1.4 8.1 0.0 2.5 2 1 0 2 2 2 0 RNA polymerase Rpb1, domain 1 FAINT PF04385.15 BAM42102.1 - 8.4e-25 86.6 14.6 1.6e-08 34.4 0.3 4.5 4 0 0 4 4 4 4 Domain of unknown function, DUF529 NinE PF05322.11 BAM42102.1 - 0.084 12.8 0.1 0.24 11.3 0.1 1.7 1 0 0 1 1 1 0 NINE Protein vATP-synt_AC39 PF01992.16 BAM42104.1 - 5.9e-85 285.7 3.2 6.8e-85 285.5 3.2 1.0 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit Pex24p PF06398.11 BAM42105.1 - 0.018 14.0 0.3 0.018 14.0 0.3 4.9 4 1 1 5 5 5 0 Integral peroxisomal membrane peroxin PH PF00169.29 BAM42105.1 - 0.59 10.7 10.1 0.41 11.2 3.8 4.0 3 1 0 3 3 3 0 PH domain Proho_convert PF12177.8 BAM42105.1 - 0.86 9.6 3.2 0.39 10.7 0.3 2.0 2 0 0 2 2 2 0 Prohormone convertase enzyme YL1 PF05764.13 BAM42106.1 - 3.3e-31 109.3 26.7 3.3e-31 109.3 26.7 2.0 2 0 0 2 2 2 1 YL1 nuclear protein YL1_C PF08265.11 BAM42106.1 - 7.3e-10 38.4 0.4 1.5e-09 37.4 0.4 1.6 1 0 0 1 1 1 1 YL1 nuclear protein C-terminal domain Lebercilin PF15619.6 BAM42108.1 - 0.00083 19.1 22.0 0.0016 18.2 10.8 3.7 2 1 1 3 3 3 1 Ciliary protein causing Leber congenital amaurosis disease bZIP_1 PF00170.21 BAM42108.1 - 0.0016 18.5 0.7 0.0016 18.5 0.7 5.1 3 1 1 4 4 4 2 bZIP transcription factor ADIP PF11559.8 BAM42108.1 - 0.0028 17.7 15.7 0.0028 17.7 15.7 3.3 3 0 0 3 3 3 2 Afadin- and alpha -actinin-Binding Herpes_BLRF2 PF05812.12 BAM42108.1 - 0.016 15.4 10.4 1.1 9.4 0.3 4.1 2 2 1 4 4 4 0 Herpesvirus BLRF2 protein Cep57_CLD_2 PF14197.6 BAM42108.1 - 0.018 15.1 29.7 0.092 12.8 8.4 5.3 4 1 2 6 6 6 0 Centrosome localisation domain of PPC89 DUF2205 PF10224.9 BAM42108.1 - 0.019 15.0 6.7 0.019 15.0 6.7 3.2 2 0 0 2 2 2 0 Short coiled-coil protein TSC22 PF01166.18 BAM42108.1 - 0.037 14.4 17.7 0.88 9.9 0.3 4.6 3 2 2 5 5 4 0 TSC-22/dip/bun family GIT_CC PF16559.5 BAM42108.1 - 2.1 8.3 25.3 1 9.3 0.1 5.2 3 1 1 4 4 4 0 GIT coiled-coil Rho guanine nucleotide exchange factor KASH_CCD PF14662.6 BAM42108.1 - 2.6 7.8 28.3 3.8 7.3 1.4 3.3 1 1 2 3 3 3 0 Coiled-coil region of CCDC155 or KASH bZIP_2 PF07716.15 BAM42108.1 - 3.4 7.8 15.3 2.6 8.2 0.2 4.2 3 1 1 4 4 4 0 Basic region leucine zipper BST2 PF16716.5 BAM42108.1 - 4.1 8.0 26.9 0.1 13.2 1.5 4.6 3 1 1 4 4 4 0 Bone marrow stromal antigen 2 DivIC PF04977.15 BAM42108.1 - 4.4 7.1 19.1 7.9 6.3 4.9 4.7 4 1 1 5 5 5 0 Septum formation initiator Cep57_MT_bd PF06657.13 BAM42108.1 - 4.9 7.7 13.2 0.79 10.2 0.9 4.2 2 1 0 3 3 3 0 Centrosome microtubule-binding domain of Cep57 ZapB PF06005.12 BAM42108.1 - 5.1 7.6 28.3 2.7 8.5 0.4 4.6 3 1 1 4 4 3 0 Cell division protein ZapB YabA PF06156.13 BAM42108.1 - 6 7.6 30.0 0.5 11.0 7.5 4.5 4 2 1 5 5 4 0 Initiation control protein YabA TolA_bind_tri PF16331.5 BAM42108.1 - 7.6 6.7 16.3 62 3.8 8.6 4.0 2 1 2 4 4 4 0 TolA binding protein trimerisation CENP-F_leu_zip PF10473.9 BAM42108.1 - 8.1 6.5 33.5 0.36 10.9 12.0 4.1 3 1 1 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF4164 PF13747.6 BAM42108.1 - 8.1 6.8 11.0 0.9 9.9 3.1 3.2 1 1 1 3 3 3 0 Domain of unknown function (DUF4164) NPV_P10 PF05531.12 BAM42108.1 - 8.7 6.9 16.3 2.2 8.8 0.2 4.0 3 1 2 5 5 5 0 Nucleopolyhedrovirus P10 protein Fez1 PF06818.15 BAM42108.1 - 9.6 6.6 35.2 0.29 11.5 16.1 3.8 1 1 1 3 3 3 0 Fez1 NOC3p PF07540.11 BAM42109.1 - 3.6e-05 24.1 0.2 3.6e-05 24.1 0.2 2.8 2 0 0 2 2 2 1 Nucleolar complex-associated protein CBF PF03914.17 BAM42109.1 - 0.17 11.9 14.3 1.6 8.7 0.3 3.8 2 2 0 3 3 3 0 CBF/Mak21 family UPF0113 PF03657.13 BAM42110.1 - 1.3e-20 73.4 0.0 1.4e-20 73.3 0.0 1.0 1 0 0 1 1 1 1 UPF0113 PUA domain AP2 PF00847.20 BAM42112.1 - 9.8e-14 51.3 0.2 2.4e-13 50.1 0.2 1.7 1 0 0 1 1 1 1 AP2 domain FAINT PF04385.15 BAM42113.1 - 2.4e-17 62.7 22.0 1.2e-07 31.7 0.4 5.8 6 0 0 6 6 6 4 Domain of unknown function, DUF529 FAINT PF04385.15 BAM42114.1 - 2e-15 56.6 10.1 0.012 15.6 0.1 5.6 5 0 0 5 5 5 5 Domain of unknown function, DUF529 FAINT PF04385.15 BAM42115.1 - 0.0002 21.3 10.8 0.0024 17.9 2.0 4.3 3 3 1 4 4 4 3 Domain of unknown function, DUF529 PC_rep PF01851.22 BAM42116.1 - 2e-26 91.0 11.3 0.0001 22.5 0.0 9.3 8 0 0 8 8 8 6 Proteasome/cyclosome repeat RPN2_C PF18004.1 BAM42116.1 - 1.3e-21 77.2 0.0 5.9e-21 75.0 0.0 1.9 1 1 0 1 1 1 1 26S proteasome regulatory subunit RPN2 C-terminal domain HEAT_2 PF13646.6 BAM42116.1 - 3.2e-17 62.7 0.1 2e-12 47.3 0.0 4.8 6 0 0 6 6 6 2 HEAT repeats HEAT PF02985.22 BAM42116.1 - 0.00036 20.5 0.1 5.2 7.6 0.0 5.5 5 0 0 5 5 5 1 HEAT repeat Kelch_5 PF13854.6 BAM42117.1 - 1.5e-36 123.8 5.0 1.1e-07 31.6 0.0 6.6 6 0 0 6 6 6 6 Kelch motif Kelch_4 PF13418.6 BAM42117.1 - 8.6e-31 105.7 8.0 2.6e-12 46.6 0.1 6.8 7 0 0 7 7 7 4 Galactose oxidase, central domain Metallophos PF00149.28 BAM42117.1 - 9.4e-31 107.9 0.1 2e-30 106.8 0.1 1.6 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Kelch_3 PF13415.6 BAM42117.1 - 9.2e-26 89.6 9.4 1.8e-06 28.1 0.1 7.6 7 0 0 7 7 7 4 Galactose oxidase, central domain Kelch_2 PF07646.15 BAM42117.1 - 2.8e-19 68.3 9.4 6.1e-05 22.8 0.1 6.9 6 0 0 6 6 6 4 Kelch motif Kelch_6 PF13964.6 BAM42117.1 - 2.7e-17 62.4 13.4 0.0087 16.3 0.0 7.2 5 2 2 7 7 7 5 Kelch motif Kelch_1 PF01344.25 BAM42117.1 - 2.3e-16 59.1 7.5 5.7e-05 22.6 0.0 6.8 6 1 0 6 6 6 3 Kelch motif RAG2 PF03089.14 BAM42117.1 - 1.5e-05 24.1 0.3 0.78 8.7 0.0 3.8 4 1 0 4 4 4 3 Recombination activating protein 2 RnaseA PF00074.20 BAM42118.1 - 0.14 12.6 5.7 0.28 11.6 5.7 1.5 1 1 0 1 1 1 0 Pancreatic ribonuclease Ribosomal_S3_C PF00189.20 BAM42119.1 - 3.9e-25 88.2 0.7 1.9e-24 86.0 1.9 1.5 2 0 0 2 2 2 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 BAM42119.1 - 2e-09 37.2 0.0 3.3e-09 36.4 0.0 1.4 1 0 0 1 1 1 1 KH domain UN_NPL4 PF11543.8 BAM42119.1 - 0.019 15.4 0.0 0.045 14.2 0.0 1.6 1 0 0 1 1 1 0 Nuclear pore localisation protein NPL4 Coilin_N PF15862.5 BAM42119.1 - 0.025 14.4 0.0 0.041 13.7 0.0 1.2 1 0 0 1 1 1 0 Coilin N-terminus Mem_trans PF03547.18 BAM42120.1 - 0.0032 15.9 2.9 0.011 14.2 2.9 1.7 1 1 0 1 1 1 1 Membrane transport protein ABC_export PF16962.5 BAM42120.1 - 0.06 11.8 1.7 0.085 11.3 1.7 1.1 1 0 0 1 1 1 0 Putative ABC exporter MarC PF01914.17 BAM42120.1 - 0.079 12.3 2.2 0.14 11.6 2.2 1.3 1 0 0 1 1 1 0 MarC family integral membrane protein DUF1361 PF07099.11 BAM42120.1 - 0.088 12.8 0.1 0.15 12.0 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1361) Sigma_reg_N PF13800.6 BAM42120.1 - 0.09 13.1 0.4 0.22 11.8 0.4 1.6 1 0 0 1 1 1 0 Sigma factor regulator N-terminal DUF5336 PF17270.2 BAM42120.1 - 0.11 12.2 0.1 0.2 11.3 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5336) EptA_B_N PF08019.12 BAM42120.1 - 0.11 12.4 0.5 0.21 11.5 0.5 1.3 1 0 0 1 1 1 0 Phosphoethanolamine transferase EptA/EptB FtsX PF02687.21 BAM42120.1 - 0.32 11.5 2.8 0.47 11.0 1.5 1.9 1 1 1 2 2 2 0 FtsX-like permease family BK_channel_a PF03493.18 BAM42121.1 - 3.5e-10 39.9 0.3 4e-09 36.6 0.1 2.5 2 0 0 2 2 2 1 Calcium-activated BK potassium channel alpha subunit Annexin_like PF18411.1 BAM42121.1 - 0.027 14.7 0.4 11 6.3 0.1 2.7 2 0 0 2 2 2 0 Annexin-like domain Lactamase_B_2 PF12706.7 BAM42124.1 - 2.7e-18 66.2 0.0 4.5e-13 49.2 0.1 2.2 2 0 0 2 2 2 2 Beta-lactamase superfamily domain Lactamase_B PF00753.27 BAM42124.1 - 1.7e-05 24.9 0.3 5.1e-05 23.4 0.3 1.8 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 BAM42124.1 - 0.021 14.5 0.1 0.41 10.3 0.1 2.7 1 1 0 1 1 1 0 tRNase Z endonuclease AltA1 PF16541.5 BAM42125.1 - 0.083 13.8 0.7 0.14 13.1 0.3 1.6 2 0 0 2 2 2 0 Alternaria alternata allergen 1 Vps5 PF09325.10 BAM42126.1 - 0.0033 17.0 0.9 0.0033 17.0 0.9 1.8 2 0 0 2 2 2 1 Vps5 C terminal like Synaptonemal_3 PF15191.6 BAM42126.1 - 0.042 13.6 1.1 2.2 8.1 0.2 3.1 2 0 0 2 2 2 0 Synaptonemal complex central element protein 3 DUF957 PF06117.11 BAM42126.1 - 0.046 13.3 0.0 0.19 11.3 0.0 2.1 1 0 0 1 1 1 0 Enterobacterial protein of unknown function (DUF957) Dynactin_p22 PF07426.11 BAM42126.1 - 0.13 12.2 6.0 0.12 12.2 1.6 2.9 2 1 1 3 3 3 0 Dynactin subunit p22 Laminin_II PF06009.12 BAM42126.1 - 3.4 7.7 5.5 0.57 10.2 0.8 2.1 3 0 0 3 3 3 0 Laminin Domain II RPW8 PF05659.11 BAM42126.1 - 5.6 6.7 7.6 26 4.5 4.4 3.2 1 1 2 3 3 3 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 COX6A PF02046.15 BAM42127.1 - 0.02 15.3 0.0 0.033 14.6 0.0 1.3 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIa YabA PF06156.13 BAM42128.1 - 0.057 14.0 2.5 0.088 13.4 0.8 2.1 2 0 0 2 2 2 0 Initiation control protein YabA Spindle_Spc25 PF08234.12 BAM42128.1 - 0.078 13.2 0.5 0.078 13.2 0.5 2.4 3 0 0 3 3 3 0 Chromosome segregation protein Spc25 PP2C PF00481.21 BAM42129.1 - 0.00034 20.3 0.0 0.00041 20.1 0.0 1.1 1 0 0 1 1 1 1 Protein phosphatase 2C SMC_N PF02463.19 BAM42130.1 - 1.6e-47 161.8 58.9 4.1e-27 95.0 15.9 3.1 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 BAM42130.1 - 5.9e-11 42.7 3.6 8.4e-05 22.5 0.3 3.3 2 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 BAM42130.1 - 2.3e-09 37.5 16.0 2.3e-09 37.5 16.0 5.2 3 2 1 4 4 4 2 AAA ATPase domain SMC_hinge PF06470.13 BAM42130.1 - 1.6e-08 34.8 0.1 9.4e-08 32.4 0.0 2.5 2 0 0 2 2 2 1 SMC proteins Flexible Hinge Domain ABC_tran PF00005.27 BAM42130.1 - 0.0063 17.0 0.7 0.0063 17.0 0.7 6.3 4 1 1 5 5 5 1 ABC transporter AAA_29 PF13555.6 BAM42130.1 - 0.015 15.0 0.0 0.042 13.6 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF1024 PF06260.12 BAM42130.1 - 0.061 13.6 3.2 0.11 12.7 0.3 2.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1024) HycH PF07450.11 BAM42130.1 - 4 7.8 12.1 0.4 11.1 0.9 4.0 3 1 0 3 3 3 0 Formate hydrogenlyase maturation protein HycH Histone PF00125.24 BAM42132.1 - 1.6e-15 57.6 0.1 1.9e-15 57.4 0.1 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 BAM42132.1 - 4.6e-05 23.6 0.0 9.5e-05 22.6 0.0 1.5 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID_20kDa PF03847.13 BAM42132.1 - 0.026 15.0 0.0 0.046 14.2 0.0 1.4 1 0 0 1 1 1 0 Transcription initiation factor TFIID subunit A RP-C PF03428.13 BAM42132.1 - 0.1 12.2 0.1 0.12 12.0 0.1 1.1 1 0 0 1 1 1 0 Replication protein C N-terminal domain Myb_DNA-binding PF00249.31 BAM42134.1 - 1.7e-11 44.2 0.0 4.3e-05 23.6 0.0 3.3 3 0 0 3 3 3 2 Myb-like DNA-binding domain DnaJ PF00226.31 BAM42134.1 - 1.6e-10 41.0 0.7 1.6e-10 41.0 0.7 4.7 4 1 0 4 4 4 1 DnaJ domain Myb_DNA-bind_6 PF13921.6 BAM42134.1 - 6.5e-05 23.1 0.0 0.2 12.0 0.0 3.5 3 0 0 3 3 3 2 Myb-like DNA-binding domain DUF4188 PF13826.6 BAM42134.1 - 0.08 13.3 0.0 0.2 12.0 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4188) DUF1713 PF08213.11 BAM42135.1 - 0.018 14.9 21.4 0.05 13.5 21.4 1.7 1 0 0 1 1 1 0 Mitochondrial domain of unknown function (DUF1713) RRM_1 PF00076.22 BAM42136.1 - 1.9e-52 175.0 10.3 5.4e-17 61.4 0.1 7.4 5 3 0 5 5 5 5 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_5 PF13893.6 BAM42136.1 - 8.5e-08 31.8 0.3 2.2e-05 24.1 0.2 3.6 3 1 1 4 4 4 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 BAM42136.1 - 0.00018 21.5 0.1 0.68 10.1 0.0 4.5 5 0 0 5 5 5 1 RNA recognition motif Limkain-b1 PF11608.8 BAM42136.1 - 0.00048 20.1 2.4 30 4.8 0.0 5.4 4 2 0 4 4 4 0 Limkain b1 BRAP2 PF07576.12 BAM42136.1 - 0.0073 16.5 1.1 1.8 8.8 0.0 3.9 4 0 0 4 4 4 1 BRCA1-associated protein 2 RRM_occluded PF16842.5 BAM42136.1 - 0.011 15.5 0.1 1.6 8.7 0.0 3.2 3 0 0 3 3 3 0 Occluded RNA-recognition motif Nup35_RRM_2 PF14605.6 BAM42136.1 - 0.014 15.4 0.1 3.1 7.9 0.0 3.6 3 0 0 3 3 3 0 Nup53/35/40-type RNA recognition motif RRM_2 PF04059.12 BAM42136.1 - 0.036 14.3 0.4 1.5 9.1 0.1 3.5 3 0 0 3 3 3 0 RNA recognition motif 2 Smg4_UPF3 PF03467.15 BAM42136.1 - 0.041 13.9 11.1 1.3 9.0 0.3 3.5 2 1 1 3 3 3 0 Smg-4/UPF3 family DUF3854 PF12965.7 BAM42137.1 - 0.88 9.5 6.3 3.2 7.7 0.3 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF3854) Symplekin_C PF12295.8 BAM42138.1 - 1.9e-22 80.3 6.7 4.9e-22 78.9 3.5 2.8 2 0 0 2 2 2 1 Symplekin tight junction protein C terminal U3snoRNP10 PF12397.8 BAM42138.1 - 0.12 12.7 1.1 0.7 10.3 0.1 2.6 2 0 0 2 2 2 0 U3 small nucleolar RNA-associated protein 10 NOT2_3_5 PF04153.18 BAM42140.1 - 2.4e-17 63.2 8.7 4.5e-17 62.4 8.7 1.6 1 1 0 1 1 1 1 NOT2 / NOT3 / NOT5 family PCI PF01399.27 BAM42141.1 - 2.9e-14 53.4 0.8 2.9e-14 53.4 0.8 2.7 3 1 0 3 3 3 1 PCI domain eIF3m_C_helix PF18005.1 BAM42141.1 - 0.00012 21.7 0.8 0.00019 21.0 0.0 1.8 2 0 0 2 2 2 1 eIF3 subunit M, C-terminal helix DUF2524 PF10732.9 BAM42141.1 - 0.016 15.5 0.3 0.053 13.8 0.2 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2524) RNA_pol_Rpb1_3 PF04983.18 BAM42141.1 - 0.15 12.0 0.1 0.48 10.4 0.0 2.0 2 0 0 2 2 2 0 RNA polymerase Rpb1, domain 3 RPN7 PF10602.9 BAM42142.1 - 1.4e-50 171.4 1.4 3.1e-50 170.3 1.4 1.6 1 0 0 1 1 1 1 26S proteasome subunit RPN7 PCI PF01399.27 BAM42142.1 - 1.6e-15 57.5 0.7 5.9e-15 55.7 0.2 2.2 2 0 0 2 2 2 1 PCI domain Ribosomal_L22e PF01776.17 BAM42143.1 - 8.8e-44 148.3 1.4 1.1e-43 148.1 1.4 1.1 1 0 0 1 1 1 1 Ribosomal L22e protein family AdoMet_Synthase PF01941.19 BAM42143.1 - 0.045 12.6 0.1 0.047 12.5 0.1 1.1 1 0 0 1 1 1 0 S-adenosylmethionine synthetase (AdoMet synthetase) RRM_1 PF00076.22 BAM42144.1 - 8.7e-18 63.9 0.0 1.4e-17 63.2 0.0 1.3 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PWI PF01480.17 BAM42145.1 - 1.9e-12 47.3 0.1 8.8e-12 45.2 0.1 2.0 2 0 0 2 2 2 1 PWI domain RRM_1 PF00076.22 BAM42145.1 - 9.2e-12 44.6 0.0 2.3e-11 43.3 0.0 1.7 1 0 0 1 1 1 1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) PTH2 PF01981.16 BAM42146.1 - 2.3e-13 50.5 0.0 2.9e-13 50.2 0.0 1.1 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 Histone PF00125.24 BAM42147.1 - 9.6e-53 178.0 1.1 1.1e-52 177.9 1.1 1.0 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CENP-S PF15630.6 BAM42147.1 - 0.00012 22.4 0.0 0.00019 21.7 0.0 1.3 1 0 0 1 1 1 1 CENP-S protein CENP-T_C PF15511.6 BAM42147.1 - 0.0003 20.9 0.4 0.00047 20.2 0.1 1.5 2 0 0 2 2 2 1 Centromere kinetochore component CENP-T histone fold PAF PF15715.5 BAM42147.1 - 0.00036 21.1 1.3 0.00043 20.9 1.3 1.1 1 0 0 1 1 1 1 PCNA-associated factor histone like domain CBFD_NFYB_HMF PF00808.23 BAM42147.1 - 0.071 13.4 0.6 0.15 12.4 0.0 1.8 2 0 0 2 2 2 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-31kDa PF02291.15 BAM42147.1 - 0.098 12.7 0.2 0.17 11.9 0.0 1.5 2 0 0 2 2 2 0 Transcription initiation factor IID, 31kD subunit Histone_H2A_C PF16211.5 BAM42148.1 - 3.4e-17 61.9 0.1 6.7e-17 60.9 0.1 1.4 1 0 0 1 1 1 1 C-terminus of histone H2A Histone PF00125.24 BAM42148.1 - 1.2e-14 54.8 0.0 1.5e-14 54.5 0.0 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 CBFD_NFYB_HMF PF00808.23 BAM42148.1 - 5.4e-05 23.4 0.0 9.5e-05 22.6 0.0 1.4 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TPR_19 PF14559.6 BAM42149.1 - 2.9e-15 56.5 8.6 2.1e-07 31.3 0.6 6.6 6 1 1 7 7 6 2 Tetratricopeptide repeat TPR_2 PF07719.17 BAM42149.1 - 2.2e-13 49.2 5.4 0.39 10.9 0.0 8.1 8 0 0 8 8 8 4 Tetratricopeptide repeat TPR_8 PF13181.6 BAM42149.1 - 2e-10 40.0 10.2 0.0067 16.6 0.0 8.2 8 0 0 8 8 8 3 Tetratricopeptide repeat TPR_1 PF00515.28 BAM42149.1 - 2.6e-10 39.7 2.8 0.0026 17.5 0.0 6.5 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_12 PF13424.6 BAM42149.1 - 3e-09 37.0 4.8 0.11 12.8 0.0 6.7 5 2 1 6 6 6 2 Tetratricopeptide repeat ANAPC3 PF12895.7 BAM42149.1 - 4.1e-08 33.3 12.8 0.0068 16.6 0.7 5.6 6 0 0 6 6 6 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_17 PF13431.6 BAM42149.1 - 4.1e-07 29.9 9.3 0.0012 19.0 0.0 7.7 8 0 0 8 8 7 1 Tetratricopeptide repeat TPR_14 PF13428.6 BAM42149.1 - 1.5e-06 28.5 0.4 14 6.9 0.0 6.6 5 2 2 7 7 6 0 Tetratricopeptide repeat TPR_6 PF13174.6 BAM42149.1 - 1.9e-06 28.1 7.4 1.2 9.9 0.0 6.9 8 0 0 8 8 6 2 Tetratricopeptide repeat TPR_7 PF13176.6 BAM42149.1 - 3.3e-06 26.7 4.1 0.79 9.9 0.0 7.8 9 0 0 9 9 9 1 Tetratricopeptide repeat TPR_16 PF13432.6 BAM42149.1 - 2.8e-05 24.7 0.2 4 8.2 0.0 3.7 3 0 0 3 3 3 1 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.6 BAM42149.1 - 4.1e-05 24.1 0.3 1.5 9.3 0.0 3.5 3 0 0 3 3 3 1 Alkyl sulfatase dimerisation TPR_10 PF13374.6 BAM42149.1 - 0.00064 19.5 0.2 5.3 7.1 0.0 4.4 4 0 0 4 4 3 1 Tetratricopeptide repeat TPR_20 PF14561.6 BAM42149.1 - 0.00087 19.6 6.6 0.084 13.2 0.2 4.3 4 0 0 4 4 4 1 Tetratricopeptide repeat PPR PF01535.20 BAM42149.1 - 0.023 14.9 0.3 34 5.0 0.0 4.7 4 0 0 4 4 4 0 PPR repeat TPR_9 PF13371.6 BAM42149.1 - 0.024 14.8 0.0 2.9 8.1 0.0 2.9 1 1 1 2 2 2 0 Tetratricopeptide repeat TPR_11 PF13414.6 BAM42149.1 - 0.035 13.8 0.0 10 5.9 0.0 4.2 4 0 0 4 4 4 0 TPR repeat ATP13 PF12921.7 BAM42149.1 - 0.047 13.6 0.8 0.32 10.9 0.0 2.8 3 0 0 3 3 2 0 Mitochondrial ATPase expression DKNYY PF13644.6 BAM42149.1 - 0.21 12.4 7.9 0.35 11.6 2.0 2.6 2 0 0 2 2 2 0 DKNYY family TPR_4 PF07721.14 BAM42149.1 - 0.3 11.8 1.0 1.6 9.5 0.0 2.7 3 0 0 3 3 2 0 Tetratricopeptide repeat TPR_15 PF13429.6 BAM42149.1 - 0.57 9.3 3.4 3.3 6.8 0.0 3.5 4 1 0 5 5 5 0 Tetratricopeptide repeat LUC7 PF03194.15 BAM42149.1 - 1.8 8.1 11.8 0.76 9.4 1.5 2.9 2 1 0 2 2 2 0 LUC7 N_terminus Ribosomal_L19 PF01245.20 BAM42150.1 - 2.5e-14 53.1 1.8 8e-14 51.5 0.0 2.1 2 0 0 2 2 2 1 Ribosomal protein L19 Slu7 PF11708.8 BAM42151.1 - 1.9e-55 188.5 16.2 5.1e-54 183.8 16.2 2.3 1 1 0 1 1 1 1 Pre-mRNA splicing Prp18-interacting factor zf-CCHC_4 PF14392.6 BAM42151.1 - 0.046 13.4 0.6 0.12 12.1 0.6 1.7 1 0 0 1 1 1 0 Zinc knuckle LAGLIDADG_3 PF14528.6 BAM42151.1 - 0.32 11.3 1.8 17 5.8 1.0 2.5 2 0 0 2 2 2 0 LAGLIDADG-like domain DUF349 PF03993.12 BAM42151.1 - 0.78 10.1 8.8 0.38 11.1 5.4 2.2 2 0 0 2 2 2 0 Domain of Unknown Function (DUF349) DHHC PF01529.20 BAM42152.1 - 1.1e-36 125.9 9.0 1.1e-36 125.9 9.0 2.3 2 1 0 2 2 2 1 DHHC palmitoyltransferase DUF4271 PF14093.6 BAM42152.1 - 0.18 11.7 12.1 0.074 13.0 3.3 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4271) DUF4282 PF14110.6 BAM42152.1 - 0.99 10.2 0.0 0.99 10.2 0.0 2.6 3 0 0 3 3 3 0 Domain of unknown function (DUF4282) Tugs PF17840.1 BAM42153.1 - 0.18 12.0 0.0 0.44 10.8 0.0 1.6 1 0 0 1 1 1 0 Tethering Ubl4a to BAGS domain PLDc_2 PF13091.6 BAM42154.1 - 1.2e-36 125.5 0.0 5.7e-18 65.1 0.0 2.2 2 0 0 2 2 2 2 PLD-like domain PLDc PF00614.22 BAM42154.1 - 8.5e-11 41.6 3.1 0.0004 20.4 0.0 2.6 2 0 0 2 2 2 2 Phospholipase D Active site motif Regulator_TrmB PF11495.8 BAM42154.1 - 0.086 12.0 0.0 3.6 6.7 0.0 2.3 2 0 0 2 2 2 0 Archaeal transcriptional regulator TrmB Adap_comp_sub PF00928.21 BAM42156.1 - 8.6e-13 48.3 0.7 8.6e-13 48.3 0.7 2.1 2 1 1 3 3 3 1 Adaptor complexes medium subunit family Clat_adaptor_s PF01217.20 BAM42156.1 - 0.00012 22.0 2.9 0.00024 21.1 2.9 1.5 1 0 0 1 1 1 1 Clathrin adaptor complex small chain DUF4706 PF15797.5 BAM42156.1 - 0.037 14.5 3.4 0.11 13.0 3.4 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4706) DUF4460 PF14687.6 BAM42156.1 - 0.2 11.7 3.0 0.31 11.1 0.7 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4460) RNA_pol_Rpb2_6 PF00562.28 BAM42157.1 - 4e-111 371.8 0.1 6.1e-111 371.2 0.1 1.3 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 BAM42157.1 - 6.2e-28 97.7 0.0 9e-28 97.2 0.0 1.3 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_3 PF04565.16 BAM42157.1 - 1.4e-26 92.5 0.0 3.3e-26 91.3 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_7 PF04560.20 BAM42157.1 - 4.3e-20 71.9 0.0 1.1e-19 70.6 0.0 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_2 PF04561.14 BAM42157.1 - 0.021 14.5 0.1 0.042 13.5 0.1 1.5 1 0 0 1 1 1 0 RNA polymerase Rpb2, domain 2 zf-ribbon_3 PF13248.6 BAM42157.1 - 0.35 10.3 1.7 1.1 8.8 0.3 2.4 2 0 0 2 2 2 0 zinc-ribbon domain MACPF PF01823.19 BAM42158.1 - 4.1e-40 138.1 0.9 4.1e-40 138.1 0.9 1.7 2 0 0 2 2 2 1 MAC/Perforin domain MucBP_2 PF17965.1 BAM42158.1 - 0.058 14.0 0.5 0.19 12.3 0.5 1.9 1 0 0 1 1 1 0 Mucin binding domain UPF0239 PF06783.11 BAM42158.1 - 2.3 8.5 6.3 0.23 11.7 1.3 1.8 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0239) MACPF PF01823.19 BAM42159.1 - 1.3e-40 139.7 0.6 2.1e-40 139.1 0.6 1.3 1 0 0 1 1 1 1 MAC/Perforin domain MRP-L47 PF06984.13 BAM42160.1 - 9.3e-23 80.2 0.3 5.4e-22 77.7 0.0 2.1 2 0 0 2 2 2 1 Mitochondrial 39-S ribosomal protein L47 (MRP-L47) Seryl_tRNA_N PF02403.22 BAM42160.1 - 0.06 13.6 5.3 0.092 13.0 5.3 1.3 1 0 0 1 1 1 0 Seryl-tRNA synthetase N-terminal domain RNA_pol_Rpb2_6 PF00562.28 BAM42162.1 - 3.6e-116 388.4 0.1 4.2e-115 384.9 0.1 2.1 1 1 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 BAM42162.1 - 5.3e-58 195.9 0.0 7.6e-58 195.4 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_2 PF04561.14 BAM42162.1 - 1.8e-45 154.9 0.0 3e-45 154.2 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_7 PF04560.20 BAM42162.1 - 1.5e-34 118.2 0.2 4.3e-34 116.8 0.2 1.9 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_3 PF04565.16 BAM42162.1 - 9.4e-27 93.0 0.0 2.1e-26 91.9 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_4 PF04566.13 BAM42162.1 - 2e-21 76.0 0.0 4.4e-21 74.9 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 BAM42162.1 - 1.1e-18 67.5 1.9 3.3e-18 66.0 1.9 1.9 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 Dr_adhesin PF12393.8 BAM42162.1 - 0.071 13.4 0.7 0.26 11.6 0.7 2.0 1 0 0 1 1 1 0 Dr family adhesin GyrI-like PF06445.15 BAM42163.1 - 0.039 14.3 0.0 0.066 13.5 0.0 1.3 1 0 0 1 1 1 0 GyrI-like small molecule binding domain VIT1 PF01988.19 BAM42164.1 - 5.7e-37 127.7 1.1 6.5e-37 127.5 1.1 1.0 1 0 0 1 1 1 1 VIT family Kelch_1 PF01344.25 BAM42165.1 - 1.3e-47 159.1 6.6 2.9e-09 36.4 0.0 6.4 6 0 0 6 6 6 6 Kelch motif Kelch_4 PF13418.6 BAM42165.1 - 2.5e-36 123.4 11.9 6.9e-09 35.6 0.0 6.5 6 0 0 6 6 6 6 Galactose oxidase, central domain Kelch_6 PF13964.6 BAM42165.1 - 7.6e-34 114.9 10.2 6.5e-06 26.2 0.0 6.6 6 0 0 6 6 6 6 Kelch motif Kelch_5 PF13854.6 BAM42165.1 - 3.5e-32 109.8 10.0 2.1e-08 34.0 0.4 6.7 6 0 0 6 6 6 6 Kelch motif Kelch_2 PF07646.15 BAM42165.1 - 2.1e-30 103.5 15.7 6.2e-06 26.0 0.1 7.4 7 0 0 7 7 7 6 Kelch motif Kelch_3 PF13415.6 BAM42165.1 - 2.5e-26 91.4 20.4 2e-05 24.8 0.4 7.1 7 1 0 7 7 7 6 Galactose oxidase, central domain BTB PF00651.31 BAM42165.1 - 4.7e-18 65.4 0.5 3.6e-17 62.6 0.1 2.5 1 1 1 2 2 2 1 BTB/POZ domain HTH_Bact PF18768.1 BAM42165.1 - 0.04 13.5 0.1 0.28 10.8 0.1 2.2 2 0 0 2 2 2 0 Helix-turn-helix bacterial domain DUF658 PF04936.12 BAM42165.1 - 0.044 13.5 0.2 0.072 12.8 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF658) BACK PF07707.15 BAM42165.1 - 0.1 12.7 0.1 1.1 9.4 0.0 2.2 2 0 0 2 2 2 0 BTB And C-terminal Kelch TT_ORF1 PF02956.14 BAM42165.1 - 2.4 6.7 5.9 3.7 6.1 5.9 1.2 1 0 0 1 1 1 0 TT viral orf 1 MobC PF05713.11 BAM42166.1 - 0.051 14.0 1.0 19 5.8 0.1 3.9 2 0 0 2 2 2 0 Bacterial mobilisation protein (MobC) PSII_Pbs27 PF13326.6 BAM42166.1 - 2.2 8.6 10.7 1.4 9.3 1.3 4.3 3 2 0 3 3 3 0 Photosystem II Pbs27 Spc7 PF08317.11 BAM42166.1 - 9.2 5.0 105.4 0.074 11.9 18.6 7.7 5 1 1 7 7 7 0 Spc7 kinetochore protein RAP PF08373.10 BAM42167.1 - 7.4e-08 32.4 0.4 2.1e-07 30.9 0.4 1.8 1 0 0 1 1 1 1 RAP domain UCR_hinge PF02320.16 BAM42169.1 - 4.4e-18 65.2 3.6 7.4e-18 64.5 3.6 1.3 1 0 0 1 1 1 1 Ubiquinol-cytochrome C reductase hinge protein zf-Tim10_DDP PF02953.15 BAM42169.1 - 1 9.1 4.8 4.8 6.9 0.4 2.5 2 1 0 2 2 2 0 Tim10/DDP family zinc finger CHCH PF06747.13 BAM42169.1 - 1.3 9.3 5.8 0.38 10.9 1.0 2.4 3 0 0 3 3 3 0 CHCH domain PRP3 PF08572.10 BAM42170.1 - 1.4e-55 188.4 17.9 1.4e-55 188.4 17.9 1.9 3 0 0 3 3 3 1 pre-mRNA processing factor 3 (PRP3) DUF1115 PF06544.12 BAM42170.1 - 4.7e-29 101.4 0.4 4.7e-29 101.4 0.4 3.4 1 1 1 2 2 2 1 Protein of unknown function (DUF1115) Gar1 PF04410.14 BAM42171.1 - 2.1e-36 125.0 0.2 2.7e-36 124.7 0.2 1.0 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region Edc3_linker PF16598.5 BAM42171.1 - 2.2 9.0 7.7 0.39 11.4 3.9 1.7 2 0 0 2 2 2 0 Linker region of enhancer of mRNA-decapping protein 3 FtsJ PF01728.19 BAM42172.1 - 1.7e-54 184.6 0.0 2e-54 184.4 0.0 1.1 1 0 0 1 1 1 1 FtsJ-like methyltransferase tRNA_lig_CPD PF08302.11 BAM42173.1 - 0.0071 15.8 0.0 0.089 12.2 0.0 2.1 2 0 0 2 2 2 1 Fungal tRNA ligase phosphodiesterase domain Phage_tail_U PF06141.11 BAM42174.1 - 0.036 14.4 1.0 2.2 8.6 0.1 3.2 2 0 0 2 2 2 0 Phage minor tail protein U TPR_8 PF13181.6 BAM42174.1 - 0.14 12.5 3.0 0.27 11.5 0.4 3.0 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 BAM42174.1 - 0.24 11.6 6.3 0.14 12.3 0.2 3.3 3 0 0 3 3 3 0 Tetratricopeptide repeat FAST_1 PF06743.15 BAM42175.1 - 7e-05 22.7 4.0 0.28 11.1 0.2 4.8 4 1 1 5 5 5 3 FAST kinase-like protein, subdomain 1 FHA PF00498.26 BAM42176.1 - 9.3e-13 48.3 1.9 2.3e-11 43.9 0.6 3.0 3 0 0 3 3 3 1 FHA domain RINGv PF12906.7 BAM42176.1 - 2.4e-12 46.8 10.1 6.2e-12 45.5 10.1 1.8 1 0 0 1 1 1 1 RING-variant domain Yop-YscD_cpl PF16697.5 BAM42176.1 - 2.2e-11 43.9 0.2 3.3e-10 40.1 0.0 2.5 3 0 0 3 3 3 1 Inner membrane component of T3SS, cytoplasmic domain LSM PF01423.22 BAM42177.1 - 4.7e-15 55.0 0.5 5.6e-15 54.8 0.5 1.1 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 BAM42177.1 - 0.015 15.4 0.0 0.022 14.9 0.0 1.3 1 0 0 1 1 1 0 Ataxin 2 SM domain DUF2362 PF10154.9 BAM42178.1 - 4.8e-11 42.3 0.3 4.8e-11 42.3 0.3 2.2 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2362) Laminin_II PF06009.12 BAM42178.1 - 0.055 13.5 0.2 11 6.0 0.0 2.6 2 0 0 2 2 2 0 Laminin Domain II Na_Ca_ex_C PF16494.5 BAM42178.1 - 1.3 9.5 3.7 9.8 6.7 0.0 3.4 2 1 1 3 3 3 0 C-terminal extension of sodium/calcium exchanger domain MFAP1 PF06991.11 BAM42179.1 - 1.5e-56 191.7 28.8 1.5e-56 191.7 28.8 2.5 1 1 1 2 2 2 1 Microfibril-associated/Pre-mRNA processing Y2_Tnp PF04986.13 BAM42179.1 - 2.9 7.9 5.3 19 5.2 5.3 2.3 1 1 0 1 1 1 0 Putative transposase DUF974 PF06159.13 BAM42180.1 - 3.6e-08 33.5 0.2 5.3e-08 33.0 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF974) A2M PF00207.22 BAM42180.1 - 0.05 13.5 0.1 0.13 12.1 0.1 1.8 2 0 0 2 2 2 0 Alpha-2-macroglobulin family WD40 PF00400.32 BAM42181.1 - 1.2e-10 41.7 0.2 3.2e-05 24.6 0.0 4.5 5 0 0 5 5 5 2 WD domain, G-beta repeat Mcl1_mid PF12341.8 BAM42181.1 - 8.2e-06 25.4 0.1 2.6e-05 23.7 0.0 1.8 1 1 0 2 2 2 1 Minichromosome loss protein, Mcl1, middle region ANAPC4_WD40 PF12894.7 BAM42181.1 - 0.0011 19.2 1.4 8.8 6.7 0.0 4.2 2 1 2 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain PQQ_3 PF13570.6 BAM42181.1 - 0.017 15.6 1.3 14 6.3 0.0 4.3 3 1 1 4 4 4 0 PQQ-like domain zf-tcix PF14952.6 BAM42181.1 - 0.083 12.5 2.2 0.17 11.5 2.2 1.5 1 0 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding IBN_N PF03810.19 BAM42182.1 - 7.6e-08 32.2 0.5 1.2e-05 25.1 0.2 3.0 2 0 0 2 2 2 2 Importin-beta N-terminal domain DSHCT PF08148.12 BAM42183.1 - 1.7e-47 161.1 0.0 4.8e-47 159.7 0.0 1.8 1 0 0 1 1 1 1 DSHCT (NUC185) domain DEAD PF00270.29 BAM42183.1 - 1.8e-20 73.4 0.0 5.2e-20 71.9 0.0 1.8 1 0 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 BAM42183.1 - 4.5e-08 33.3 0.0 1.4e-07 31.7 0.0 1.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 BAM42183.1 - 3.7e-07 30.5 2.1 5.8e-06 26.6 0.2 3.6 3 1 0 3 3 3 1 Helicase conserved C-terminal domain rRNA_proc-arch PF13234.6 BAM42183.1 - 0.00011 22.3 10.3 0.00011 22.3 10.3 2.3 2 1 0 2 2 2 1 rRNA-processing arch domain AAA_19 PF13245.6 BAM42183.1 - 0.17 12.2 0.0 0.82 10.0 0.0 2.2 2 0 0 2 2 2 0 AAA domain Peptidase_S9 PF00326.21 BAM42184.1 - 1.3e-28 100.0 0.0 2.4e-28 99.1 0.0 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family Peptidase_S9_N PF02897.15 BAM42184.1 - 3.4e-10 39.3 0.0 5.2e-10 38.7 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase, N-terminal beta-propeller domain Proteasome PF00227.26 BAM42185.1 - 2.1e-26 92.6 0.0 2.9e-26 92.1 0.0 1.3 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 BAM42185.1 - 5.1e-13 48.4 0.0 5.1e-13 48.4 0.0 1.9 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature tRNA-synt_1b PF00579.25 BAM42186.1 - 3.1e-46 158.0 0.0 4.2e-46 157.6 0.0 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) VWA_2 PF13519.6 BAM42187.1 - 1.7e-11 44.7 0.0 1.1e-10 42.1 0.0 2.3 3 0 0 3 3 3 1 von Willebrand factor type A domain V-ATPase_H_C PF11698.8 BAM42187.1 - 0.059 13.5 0.9 0.37 10.9 0.4 2.3 3 0 0 3 3 3 0 V-ATPase subunit H Glutaredoxin PF00462.24 BAM42187.1 - 0.14 12.3 0.3 0.48 10.7 0.0 2.0 2 0 0 2 2 2 0 Glutaredoxin PP1_inhibitor PF05361.12 BAM42187.1 - 7.9 6.5 9.5 3.8 7.5 1.2 3.1 2 1 1 3 3 3 0 PKC-activated protein phosphatase-1 inhibitor XRN_N PF03159.18 BAM42188.1 - 5.5e-99 330.5 0.0 1.4e-98 329.2 0.0 1.8 1 0 0 1 1 1 1 XRN 5'-3' exonuclease N-terminus XRN_M PF17846.1 BAM42188.1 - 8.8e-97 324.8 8.8 1.7e-57 195.3 4.1 2.8 2 1 0 2 2 2 2 Xrn1 helical domain Cnd1 PF12717.7 BAM42190.1 - 6.4e-26 91.3 0.1 6.4e-26 91.3 0.1 4.2 3 1 0 3 3 3 1 non-SMC mitotic condensation complex subunit 1 Nipped-B_C PF12830.7 BAM42190.1 - 9.5e-05 22.4 2.5 0.02 14.9 0.0 3.9 3 1 0 3 3 3 2 Sister chromatid cohesion C-terminus HEAT PF02985.22 BAM42190.1 - 0.17 12.2 0.2 6 7.4 0.0 3.6 4 0 0 4 4 4 0 HEAT repeat Presenilin PF01080.17 BAM42191.1 - 3.3 6.4 8.4 3.6 6.3 8.4 1.1 1 0 0 1 1 1 0 Presenilin Ndc1_Nup PF09531.10 BAM42191.1 - 3.4 6.3 8.1 3.3 6.3 8.1 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup PAT1 PF09770.9 BAM42192.1 - 0.0066 14.8 1.5 0.034 12.4 0.0 2.4 3 0 0 3 3 3 2 Topoisomerase II-associated protein PAT1 Thioredoxin_8 PF13905.6 BAM42193.1 - 5.4e-17 61.9 0.8 2.4e-10 40.6 0.2 3.6 4 0 0 4 4 4 2 Thioredoxin-like AhpC-TSA PF00578.21 BAM42193.1 - 0.004 17.1 0.1 0.75 9.7 0.0 2.9 2 1 0 2 2 2 2 AhpC/TSA family RabGAP-TBC PF00566.18 BAM42194.1 - 4.5e-50 170.3 5.2 6.3e-50 169.8 5.2 1.1 1 0 0 1 1 1 1 Rab-GTPase-TBC domain Antimicrobial14 PF08109.11 BAM42194.1 - 0.21 11.7 0.3 0.92 9.6 0.0 2.0 2 0 0 2 2 2 0 Lactocin 705 family TFX_C PF14601.6 BAM42195.1 - 0.034 14.1 0.2 0.93 9.5 0.0 2.4 2 0 0 2 2 2 0 DNA_binding protein, TFX, C-term WD40 PF00400.32 BAM42196.1 - 0.00051 20.8 1.4 8.1 7.5 0.1 5.0 5 0 0 5 5 5 2 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM42196.1 - 0.0022 18.2 0.0 5.6 7.3 0.0 4.1 4 0 0 4 4 4 2 Anaphase-promoting complex subunit 4 WD40 domain CDH-cyt PF16010.5 BAM42196.1 - 0.15 11.7 0.6 0.34 10.6 0.6 1.5 1 0 0 1 1 1 0 Cytochrome domain of cellobiose dehydrogenase CBFD_NFYB_HMF PF00808.23 BAM42198.1 - 5.4e-07 29.8 0.0 9e-07 29.1 0.0 1.3 1 0 0 1 1 1 1 Histone-like transcription factor (CBF/NF-Y) and archaeal histone Histone PF00125.24 BAM42198.1 - 0.00029 21.2 0.5 0.00048 20.5 0.0 1.6 2 0 0 2 2 2 1 Core histone H2A/H2B/H3/H4 SID-1_RNA_chan PF13965.6 BAM42198.1 - 0.01 14.3 0.9 0.012 14.1 0.9 1.0 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 RNA_pol_3_Rpc31 PF11705.8 BAM42198.1 - 0.3 11.3 13.3 0.55 10.5 13.3 1.4 1 1 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 NOA36 PF06524.12 BAM42198.1 - 3.5 6.9 8.6 4.1 6.6 8.6 1.3 1 0 0 1 1 1 0 NOA36 protein Rep_fac_C PF08542.11 BAM42199.1 - 6.8e-16 58.5 0.0 1.8e-15 57.1 0.0 1.8 1 0 0 1 1 1 1 Replication factor C C-terminal domain AAA PF00004.29 BAM42199.1 - 2e-15 57.4 0.0 4.6e-15 56.2 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 BAM42199.1 - 3.1e-15 56.3 0.1 8.2e-14 51.7 0.1 2.5 1 1 0 1 1 1 1 DNA polymerase III, delta subunit Rad17 PF03215.15 BAM42199.1 - 3.9e-08 33.4 0.0 9e-08 32.3 0.0 1.6 1 0 0 1 1 1 1 Rad17 P-loop domain AAA_22 PF13401.6 BAM42199.1 - 1e-06 29.0 0.1 6.1e-06 26.6 0.0 2.2 2 1 0 2 2 2 1 AAA domain AAA_30 PF13604.6 BAM42199.1 - 2.4e-06 27.4 0.0 4.3e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 BAM42199.1 - 4.5e-06 27.1 0.0 8.2e-05 23.0 0.0 2.5 2 1 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 BAM42199.1 - 4.8e-06 26.4 0.1 6.7e-05 22.7 0.0 2.5 3 0 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain AAA_assoc_2 PF16193.5 BAM42199.1 - 1.7e-05 25.1 0.0 4.6e-05 23.7 0.0 1.8 1 0 0 1 1 1 1 AAA C-terminal domain AAA_19 PF13245.6 BAM42199.1 - 5e-05 23.7 0.0 0.001 19.4 0.0 2.5 2 2 0 2 2 2 1 AAA domain AAA_14 PF13173.6 BAM42199.1 - 0.00028 20.9 0.0 0.0006 19.9 0.0 1.5 1 0 0 1 1 1 1 AAA domain ResIII PF04851.15 BAM42199.1 - 0.00031 20.8 0.0 0.084 12.9 0.0 2.3 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit AAA_11 PF13086.6 BAM42199.1 - 0.00039 20.3 0.0 0.0013 18.5 0.0 1.7 1 1 1 2 2 2 1 AAA domain ABC_tran PF00005.27 BAM42199.1 - 0.00043 20.8 0.0 0.0019 18.7 0.0 1.9 2 0 0 2 2 2 1 ABC transporter DUF2075 PF09848.9 BAM42199.1 - 0.00059 19.2 0.1 0.0016 17.8 0.1 1.6 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_23 PF13476.6 BAM42199.1 - 0.00087 19.8 0.1 0.0021 18.6 0.1 1.6 1 1 0 1 1 1 1 AAA domain DNA_pol3_delta PF06144.13 BAM42199.1 - 0.0018 18.1 0.1 0.0054 16.5 0.1 1.9 1 1 0 1 1 1 1 DNA polymerase III, delta subunit AAA_5 PF07728.14 BAM42199.1 - 0.0019 18.2 0.0 0.0069 16.4 0.0 1.9 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 BAM42199.1 - 0.0029 17.4 0.0 0.0076 16.0 0.0 1.6 2 0 0 2 2 2 1 AAA domain TniB PF05621.11 BAM42199.1 - 0.0032 16.9 0.0 0.3 10.5 0.0 2.3 2 0 0 2 2 2 1 Bacterial TniB protein Mg_chelatase PF01078.21 BAM42199.1 - 0.012 15.0 0.1 0.076 12.4 0.1 2.1 1 1 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 BAM42199.1 - 0.018 14.9 0.0 0.068 13.0 0.0 2.0 2 1 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) TK PF00265.18 BAM42199.1 - 0.025 14.4 0.0 0.048 13.5 0.0 1.4 1 0 0 1 1 1 0 Thymidine kinase Viral_helicase1 PF01443.18 BAM42199.1 - 0.041 13.6 0.0 0.072 12.8 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase SRP54 PF00448.22 BAM42199.1 - 0.041 13.5 0.0 0.074 12.7 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain DEAD PF00270.29 BAM42199.1 - 0.061 13.1 2.0 0.39 10.4 0.0 2.7 2 2 0 3 3 3 0 DEAD/DEAH box helicase AAA_29 PF13555.6 BAM42199.1 - 0.07 12.9 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_33 PF13671.6 BAM42199.1 - 0.077 13.1 0.1 0.17 12.1 0.1 1.6 1 1 0 1 1 1 0 AAA domain AAA_27 PF13514.6 BAM42199.1 - 0.08 12.5 0.0 0.17 11.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 BAM42199.1 - 0.08 12.4 0.0 0.53 9.8 0.0 2.3 2 1 1 3 3 3 0 P-loop containing dynein motor region AAA_2 PF07724.14 BAM42199.1 - 0.089 12.9 0.0 1.4 9.0 0.0 2.5 2 1 1 3 3 3 0 AAA domain (Cdc48 subfamily) FtsK_SpoIIIE PF01580.18 BAM42199.1 - 0.11 11.9 0.0 0.22 10.9 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family RNA_helicase PF00910.22 BAM42199.1 - 0.13 12.6 0.1 0.75 10.2 0.0 2.5 2 1 0 2 2 1 0 RNA helicase Zeta_toxin PF06414.12 BAM42199.1 - 0.15 11.4 0.0 0.35 10.1 0.0 1.6 1 0 0 1 1 1 0 Zeta toxin AAA PF00004.29 BAM42200.1 - 3.6e-12 46.8 0.0 1.6e-10 41.5 0.0 2.5 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_15 PF13175.6 BAM42200.1 - 0.001 18.9 0.1 0.0022 17.8 0.1 1.6 1 0 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 BAM42200.1 - 0.002 17.8 0.0 0.0053 16.5 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 BAM42200.1 - 0.0064 17.0 0.0 0.019 15.5 0.0 1.8 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 BAM42200.1 - 0.011 16.2 0.0 0.038 14.5 0.0 1.9 1 0 0 1 1 1 0 ABC transporter AAA_16 PF13191.6 BAM42200.1 - 0.041 14.3 0.0 0.18 12.2 0.0 2.1 2 0 0 2 2 2 0 AAA ATPase domain ATPase_2 PF01637.18 BAM42200.1 - 0.042 13.7 0.1 0.11 12.4 0.1 1.7 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea ABC_ATPase PF09818.9 BAM42200.1 - 0.057 12.2 0.0 0.09 11.5 0.0 1.2 1 0 0 1 1 1 0 Predicted ATPase of the ABC class NACHT PF05729.12 BAM42200.1 - 0.078 12.9 0.0 2 8.3 0.0 2.7 3 0 0 3 3 3 0 NACHT domain Gp_dh_C PF02800.20 BAM42201.1 - 3.9e-66 221.5 0.0 6.1e-66 220.9 0.0 1.3 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Gp_dh_N PF00044.24 BAM42201.1 - 7.8e-35 119.3 0.0 1.7e-34 118.2 0.0 1.6 1 0 0 1 1 1 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ADH_zinc_N PF00107.26 BAM42201.1 - 0.0037 17.2 0.1 0.016 15.2 0.1 1.9 1 1 1 2 2 2 1 Zinc-binding dehydrogenase Radical_SAM PF04055.21 BAM42201.1 - 0.034 14.5 0.0 0.1 13.0 0.0 1.7 2 0 0 2 2 2 0 Radical SAM superfamily DapB_N PF01113.20 BAM42201.1 - 0.039 14.1 0.4 0.48 10.6 0.1 2.7 2 1 0 2 2 2 0 Dihydrodipicolinate reductase, N-terminus Cytochrom_C1 PF02167.15 BAM42202.1 - 3.3e-84 282.0 0.0 4.5e-84 281.6 0.0 1.2 1 0 0 1 1 1 1 Cytochrome C1 family Cytochrome_CBB3 PF13442.6 BAM42202.1 - 0.05 13.9 0.0 0.12 12.7 0.0 1.7 1 0 0 1 1 1 0 Cytochrome C oxidase, cbb3-type, subunit III zf-met PF12874.7 BAM42203.1 - 4.4e-06 26.9 2.4 8.9e-06 25.9 2.4 1.6 1 0 0 1 1 1 1 Zinc-finger of C2H2 type zf-C2H2_jaz PF12171.8 BAM42203.1 - 2.4e-05 24.5 1.8 2.4e-05 24.5 1.8 1.9 2 0 0 2 2 2 1 Zinc-finger double-stranded RNA-binding zf-U1 PF06220.12 BAM42203.1 - 0.0064 16.2 0.4 0.016 15.0 0.4 1.6 1 0 0 1 1 1 1 U1 zinc finger zf_C2H2_ZHX PF18387.1 BAM42203.1 - 0.015 14.9 0.2 0.03 14.0 0.2 1.5 1 0 0 1 1 1 0 Zinc-fingers and homeoboxes C2H2 finger domain zf-C2H2_2 PF12756.7 BAM42203.1 - 0.1 13.0 0.0 0.1 13.0 0.0 2.1 2 0 0 2 2 2 0 C2H2 type zinc-finger (2 copies) GCD14 PF08704.10 BAM42203.1 - 0.12 12.1 2.4 0.17 11.5 2.4 1.3 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit Borrelia_P83 PF05262.11 BAM42203.1 - 0.13 10.7 11.1 0.17 10.4 11.1 1.1 1 0 0 1 1 1 0 Borrelia P83/100 protein Prominin PF05478.11 BAM42203.1 - 1.7 6.5 5.6 2 6.3 5.6 1.1 1 0 0 1 1 1 0 Prominin Metal_resist PF13801.6 BAM42203.1 - 2.5 8.3 8.1 3.8 7.7 0.4 2.2 1 1 1 2 2 2 0 Heavy-metal resistance FH2 PF02181.23 BAM42204.1 - 0.0012 18.0 5.0 0.034 13.3 0.5 2.2 2 0 0 2 2 2 2 Formin Homology 2 Domain Syntaxin_2 PF14523.6 BAM42204.1 - 0.0025 18.2 8.6 0.016 15.6 2.8 2.9 2 1 0 2 2 2 1 Syntaxin-like protein MCPsignal PF00015.21 BAM42204.1 - 0.0055 16.5 1.8 0.29 10.9 0.3 2.2 2 0 0 2 2 2 1 Methyl-accepting chemotaxis protein (MCP) signalling domain Hormone_1 PF00103.20 BAM42204.1 - 0.0091 15.8 0.7 0.021 14.6 0.7 1.5 1 0 0 1 1 1 1 Somatotropin hormone family Syntaxin PF00804.25 BAM42204.1 - 0.049 13.3 11.0 0.93 9.1 2.9 2.4 1 1 1 2 2 2 0 Syntaxin BLOC1_2 PF10046.9 BAM42204.1 - 0.051 13.9 6.7 0.74 10.2 0.2 2.6 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Vps39_2 PF10367.9 BAM42204.1 - 0.11 12.9 0.5 2.1 8.8 0.0 2.8 1 1 1 2 2 2 0 Vacuolar sorting protein 39 domain 2 FapA PF03961.13 BAM42204.1 - 0.14 10.8 5.5 0.025 13.2 1.2 1.7 1 1 1 2 2 2 0 Flagellar Assembly Protein A DUF2408 PF10303.9 BAM42204.1 - 0.89 10.1 9.2 0.29 11.7 4.8 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF2408) DUF745 PF05335.13 BAM42204.1 - 2.6 7.7 4.5 9 6.0 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF745) Ribosomal_L13 PF00572.18 BAM42205.1 - 7.2e-11 42.4 0.0 8e-09 35.8 0.0 2.3 1 1 0 1 1 1 1 Ribosomal protein L13 PI3_PI4_kinase PF00454.27 BAM42206.1 - 6.8e-31 108.0 2.6 3.3e-30 105.7 1.1 2.6 2 1 0 2 2 2 1 Phosphatidylinositol 3- and 4-kinase GCN5L1 PF06320.13 BAM42206.1 - 0.083 13.0 0.1 0.21 11.8 0.1 1.6 1 0 0 1 1 1 0 GCN5-like protein 1 (GCN5L1) MapZ_EC1 PF18041.1 BAM42206.1 - 0.2 11.9 1.3 0.46 10.7 0.1 2.1 2 0 0 2 2 2 0 MapZ extracellular domain 1 tRNA-synt_1d PF00750.19 BAM42207.1 - 5.9e-110 367.5 0.9 5.9e-110 367.5 0.9 1.8 3 0 0 3 3 3 1 tRNA synthetases class I (R) DALR_1 PF05746.15 BAM42207.1 - 1.8e-26 92.6 1.1 1e-20 74.1 0.0 3.5 2 1 1 3 3 3 2 DALR anticodon binding domain Arg_tRNA_synt_N PF03485.16 BAM42207.1 - 2.4e-14 53.7 0.0 9.9e-14 51.7 0.0 2.2 1 0 0 1 1 1 1 Arginyl tRNA synthetase N terminal domain tRNA-synt_1e PF01406.19 BAM42207.1 - 9.1e-05 21.9 2.0 0.00022 20.7 0.0 2.5 3 1 0 3 3 3 1 tRNA synthetases class I (C) catalytic domain Fib_alpha PF08702.10 BAM42207.1 - 0.002 18.3 3.8 0.25 11.5 0.9 2.8 2 0 0 2 2 2 2 Fibrinogen alpha/beta chain family Exonuc_VII_L PF02601.15 BAM42207.1 - 1.4 8.4 3.5 0.84 9.1 1.3 1.7 2 0 0 2 2 2 0 Exonuclease VII, large subunit SLATT_6 PF18169.1 BAM42207.1 - 2.6 7.6 5.2 2.3 7.8 2.5 2.3 2 1 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 6 DUF2205 PF10224.9 BAM42207.1 - 3.5 7.7 7.0 0.27 11.3 0.3 2.6 3 0 0 3 3 3 0 Short coiled-coil protein SLBP_RNA_bind PF15247.6 BAM42208.1 - 1.3e-18 66.9 5.5 1.8e-18 66.4 5.5 1.2 1 0 0 1 1 1 1 Histone RNA hairpin-binding protein RNA-binding domain UPF0223 PF05256.12 BAM42208.1 - 0.037 14.4 0.0 0.085 13.2 0.0 1.6 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0223) DUF294 PF03445.13 BAM42208.1 - 0.2 11.5 0.4 0.35 10.7 0.4 1.4 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 Ribosomal_L14 PF00238.19 BAM42209.1 - 4e-23 81.8 0.7 4.4e-23 81.7 0.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e DUF126 PF01989.16 BAM42209.1 - 0.092 12.5 0.2 1.3 8.8 0.0 2.5 1 1 1 2 2 2 0 Aconitase X swivel domain DUF2179 PF10035.9 BAM42209.1 - 0.1 12.3 0.2 0.17 11.7 0.2 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2179) ATP-synt_C PF00137.21 BAM42210.1 - 3.6e-31 107.3 30.6 6.4e-18 64.8 11.8 2.2 2 0 0 2 2 2 2 ATP synthase subunit C Cyclin PF08613.11 BAM42211.1 - 2.4e-30 106.0 1.1 5.2e-30 104.9 1.1 1.5 1 0 0 1 1 1 1 Cyclin Cyclin_N PF00134.23 BAM42211.1 - 6.9e-12 45.2 0.2 1.1e-11 44.6 0.2 1.2 1 0 0 1 1 1 1 Cyclin, N-terminal domain Proteasome PF00227.26 BAM42212.1 - 1.3e-31 109.6 0.1 1.5e-31 109.4 0.1 1.1 1 0 0 1 1 1 1 Proteasome subunit RRM_1 PF00076.22 BAM42214.1 - 3.1e-30 103.8 0.0 3.1e-18 65.4 0.0 2.2 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 BAM42214.1 - 0.0013 18.7 0.0 0.3 11.2 0.0 2.3 2 0 0 2 2 2 2 RNA binding motif RRM_7 PF16367.5 BAM42214.1 - 0.012 15.7 0.0 0.044 13.9 0.0 2.0 1 1 1 2 2 2 0 RNA recognition motif RRM_occluded PF16842.5 BAM42214.1 - 0.13 12.2 0.0 0.23 11.4 0.0 1.3 1 0 0 1 1 1 0 Occluded RNA-recognition motif SPT16 PF08644.11 BAM42215.1 - 1.5e-45 155.1 0.4 1.5e-45 155.1 0.4 3.1 2 1 1 3 3 3 1 FACT complex subunit (SPT16/CDC68) Peptidase_M24 PF00557.24 BAM42215.1 - 8.2e-23 81.2 0.0 1.5e-22 80.4 0.0 1.4 1 0 0 1 1 1 1 Metallopeptidase family M24 FACT-Spt16_Nlob PF14826.6 BAM42215.1 - 1.6e-21 76.7 0.5 1.6e-21 76.7 0.5 3.1 3 0 0 3 3 3 1 FACT complex subunit SPT16 N-terminal lobe domain Rtt106 PF08512.12 BAM42215.1 - 3.5e-13 49.8 0.0 9.2e-13 48.4 0.0 1.8 1 0 0 1 1 1 1 Histone chaperone Rttp106-like CobT PF06213.12 BAM42215.1 - 0.6 9.5 27.1 0.45 9.9 19.4 2.3 2 0 0 2 2 2 0 Cobalamin biosynthesis protein CobT CPSF100_C PF13299.6 BAM42215.1 - 6.3 6.9 12.4 1.9 8.7 4.2 2.7 2 0 0 2 2 2 0 Cleavage and polyadenylation factor 2 C-terminal S4 PF01479.25 BAM42218.1 - 1.2e-09 37.7 0.1 3.4e-09 36.3 0.1 1.7 1 0 0 1 1 1 1 S4 domain Ribosomal_S4 PF00163.19 BAM42218.1 - 2.3e-06 28.4 1.1 8.4e-06 26.6 0.4 2.2 1 1 1 2 2 2 1 Ribosomal protein S4/S9 N-terminal domain FoP_duplication PF13865.6 BAM42219.1 - 9.1e-14 51.8 9.1 9.1e-14 51.8 9.1 2.3 1 1 1 2 2 2 1 C-terminal duplication domain of Friend of PRMT1 VWA PF00092.28 BAM42221.1 - 2.3e-25 89.8 0.0 3.4e-25 89.3 0.0 1.2 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_2 PF13519.6 BAM42221.1 - 6.7e-11 42.8 0.0 1.2e-10 42.0 0.0 1.4 1 0 0 1 1 1 1 von Willebrand factor type A domain TSP_1 PF00090.19 BAM42221.1 - 0.0015 18.7 3.6 0.0045 17.2 3.6 1.9 1 1 0 1 1 1 1 Thrombospondin type 1 domain VWA_3 PF13768.6 BAM42221.1 - 0.022 14.7 0.0 0.036 14.0 0.0 1.3 1 0 0 1 1 1 0 von Willebrand factor type A domain BacA PF02673.18 BAM42221.1 - 0.24 11.1 0.6 0.4 10.4 0.6 1.2 1 0 0 1 1 1 0 Bacitracin resistance protein BacA VWA PF00092.28 BAM42223.1 - 1e-23 84.5 0.8 4.9e-23 82.3 0.0 2.3 3 0 0 3 3 3 1 von Willebrand factor type A domain VWA_2 PF13519.6 BAM42223.1 - 2.9e-09 37.5 2.7 6.6e-09 36.4 0.1 2.6 2 0 0 2 2 2 1 von Willebrand factor type A domain TSP_1 PF00090.19 BAM42223.1 - 0.049 13.8 0.3 0.19 12.0 0.3 2.1 1 0 0 1 1 1 0 Thrombospondin type 1 domain LSM PF01423.22 BAM42224.1 - 1.5e-13 50.3 0.3 2.2e-13 49.7 0.3 1.2 1 0 0 1 1 1 1 LSM domain Hfq PF17209.3 BAM42224.1 - 0.005 16.5 0.1 0.0077 15.9 0.1 1.3 1 0 0 1 1 1 1 Hfq protein LSM14 PF12701.7 BAM42224.1 - 0.0057 16.7 0.2 0.0098 16.0 0.2 1.4 1 1 0 1 1 1 1 Scd6-like Sm domain NUDIX PF00293.28 BAM42225.1 - 8.2e-18 64.7 0.0 1.1e-17 64.4 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain CDC73_C PF05179.14 BAM42226.1 - 1.7e-39 135.0 0.4 1.7e-39 135.0 0.4 1.8 2 0 0 2 2 2 1 RNA pol II accessory factor, Cdc73 family, C-terminal bacHORMA_1 PF18138.1 BAM42226.1 - 0.0075 16.2 0.1 0.28 11.1 0.0 2.2 2 0 0 2 2 2 1 Bacterial HORMA domain family 1 zf-CDGSH PF09360.10 BAM42227.1 - 1.7e-10 40.9 0.7 3.3e-10 40.0 0.7 1.5 1 0 0 1 1 1 1 Iron-binding zinc finger CDGSH type DHHC PF01529.20 BAM42229.1 - 5.3e-35 120.4 16.4 5.3e-35 120.4 16.4 2.5 2 0 0 2 2 2 1 DHHC palmitoyltransferase Med28 PF11594.8 BAM42229.1 - 0.032 14.3 0.3 0.068 13.3 0.3 1.5 1 0 0 1 1 1 0 Mediator complex subunit 28 Ccdc124 PF06244.12 BAM42230.1 - 6.4e-21 75.2 28.7 6.9e-19 68.7 28.7 2.7 1 1 0 1 1 1 1 Coiled-coil domain-containing protein 124 /Oxs1 DUF2894 PF11445.8 BAM42230.1 - 0.045 14.2 7.7 0.021 15.3 5.8 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2894) Hfq PF17209.3 BAM42231.1 - 0.0012 18.4 0.1 0.003 17.2 0.1 1.7 1 0 0 1 1 1 1 Hfq protein LSM PF01423.22 BAM42231.1 - 0.05 13.3 2.4 0.081 12.6 0.4 2.3 2 0 0 2 2 2 0 LSM domain ENT PF03735.14 BAM42231.1 - 0.063 13.4 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 ENT domain EII-GUT PF03608.13 BAM42231.1 - 0.063 13.2 0.0 0.088 12.7 0.0 1.2 1 0 0 1 1 1 0 PTS system enzyme II sorbitol-specific factor DSS1_SEM1 PF05160.13 BAM42232.1 - 0.014 15.4 20.8 0.035 14.2 20.8 1.6 1 1 0 1 1 1 0 DSS1/SEM1 family NOD2_WH PF17779.1 BAM42232.1 - 0.052 13.9 0.0 0.085 13.2 0.0 1.3 1 0 0 1 1 1 0 NOD2 winged helix domain Adaptin_N PF01602.20 BAM42233.1 - 4.2e-62 210.4 11.6 5.7e-62 210.0 11.6 1.1 1 0 0 1 1 1 1 Adaptin N terminal region COP-gamma_platf PF08752.10 BAM42233.1 - 7.4e-16 58.6 0.5 4e-15 56.3 0.2 2.2 2 0 0 2 2 2 1 Coatomer gamma subunit appendage platform subdomain Coatomer_g_Cpla PF16381.5 BAM42233.1 - 1.6e-13 50.8 0.0 4.5e-13 49.3 0.0 1.9 1 0 0 1 1 1 1 Coatomer subunit gamma-1 C-terminal appendage platform Cnd1 PF12717.7 BAM42233.1 - 2.8e-09 37.2 9.0 2.5e-08 34.2 0.1 4.2 4 1 0 4 4 4 1 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 BAM42233.1 - 8.9e-07 29.2 0.0 0.24 11.8 0.0 4.9 3 1 3 6 6 6 2 HEAT repeats HEAT PF02985.22 BAM42233.1 - 0.0056 16.8 0.2 15 6.1 0.0 4.6 5 0 0 5 5 5 1 HEAT repeat Pox_J1 PF03338.15 BAM42233.1 - 0.035 14.0 0.0 0.099 12.5 0.0 1.8 1 0 0 1 1 1 0 Poxvirus J1 protein TTSSLRR PF12468.8 BAM42233.1 - 0.11 12.7 0.3 0.27 11.5 0.3 1.7 1 0 0 1 1 1 0 Type III secretion system leucine rich repeat protein Cript PF10235.9 BAM42234.1 - 0.0014 19.1 3.4 0.0014 19.1 3.4 1.9 1 1 1 2 2 2 1 Microtubule-associated protein CRIPT DUF1636 PF07845.11 BAM42234.1 - 0.16 12.4 3.5 0.18 12.3 3.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1636) DUF3222 PF11519.8 BAM42234.1 - 0.71 10.1 3.7 6.5 7.1 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3222) zinc_ribbon_15 PF17032.5 BAM42234.1 - 0.72 10.6 8.0 5.3 7.9 8.0 1.9 1 1 0 1 1 1 0 zinc-ribbon family Dynamin_M PF01031.20 BAM42235.1 - 1.2e-71 241.2 0.0 3.4e-71 239.8 0.0 1.8 1 1 1 2 2 2 1 Dynamin central region Dynamin_N PF00350.23 BAM42235.1 - 1.7e-46 158.3 0.0 3.2e-46 157.5 0.0 1.5 1 0 0 1 1 1 1 Dynamin family GED PF02212.18 BAM42235.1 - 2.4e-18 66.0 0.0 8.3e-18 64.3 0.0 2.0 1 0 0 1 1 1 1 Dynamin GTPase effector domain MMR_HSR1 PF01926.23 BAM42235.1 - 0.00052 20.1 0.0 0.0015 18.6 0.0 1.8 1 1 0 1 1 1 1 50S ribosome-binding GTPase DUF3752 PF12572.8 BAM42236.1 - 8.8e-06 26.3 8.3 8.8e-06 26.3 8.3 3.4 2 1 0 2 2 2 1 Protein of unknown function (DUF3752) Myb_DNA-bind_6 PF13921.6 BAM42236.1 - 0.029 14.6 1.9 0.27 11.5 0.5 3.1 2 1 0 2 2 2 0 Myb-like DNA-binding domain Peptidase_M22 PF00814.25 BAM42237.1 - 4e-74 249.7 0.0 4.7e-74 249.5 0.0 1.0 1 0 0 1 1 1 1 Glycoprotease family PCI PF01399.27 BAM42238.1 - 6.2e-11 42.7 2.2 1.1e-10 42.0 0.3 2.4 2 1 1 3 3 3 1 PCI domain Colipase-like PF15083.6 BAM42238.1 - 0.013 15.6 2.0 0.013 15.6 0.1 2.0 3 0 0 3 3 3 0 Colipase-like SpoU_methylase PF00588.19 BAM42241.1 - 1.5e-06 28.4 0.0 2.9e-06 27.5 0.0 1.4 1 0 0 1 1 1 1 SpoU rRNA Methylase family CIDE-N PF02017.15 BAM42241.1 - 0.082 12.9 0.0 0.25 11.4 0.0 1.8 2 0 0 2 2 2 0 CIDE-N domain LRR_4 PF12799.7 BAM42242.1 - 1.1e-35 121.0 41.5 7.4e-09 35.8 0.8 6.9 5 1 2 7 7 7 7 Leucine Rich repeats (2 copies) LRR_8 PF13855.6 BAM42242.1 - 5.8e-24 83.6 43.1 4.1e-08 32.9 0.7 6.4 1 1 4 6 6 6 6 Leucine rich repeat LRR_9 PF14580.6 BAM42242.1 - 5.8e-19 68.3 17.8 3.5e-09 36.4 8.0 3.7 1 1 3 4 4 4 3 Leucine-rich repeat LRR_6 PF13516.6 BAM42242.1 - 6.5e-08 32.0 33.9 0.41 10.8 0.3 9.5 10 0 0 10 10 10 5 Leucine Rich repeat LRR_1 PF00560.33 BAM42242.1 - 0.00024 21.2 34.3 8.6 7.3 0.2 10.1 8 1 0 8 8 8 2 Leucine Rich Repeat UB2H PF14814.6 BAM42242.1 - 0.078 13.0 1.4 52 4.0 0.0 4.3 2 1 0 4 4 4 0 Bifunctional transglycosylase second domain WD40 PF00400.32 BAM42243.1 - 3e-52 173.4 28.1 3.8e-11 43.3 0.1 7.2 7 0 0 7 7 7 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM42243.1 - 1.2e-14 54.3 2.0 0.033 14.5 0.0 5.2 2 2 3 5 5 5 5 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 BAM42243.1 - 1.1e-06 28.3 0.0 0.00044 19.7 0.0 2.5 2 1 0 2 2 2 2 WD40-like domain Ge1_WD40 PF16529.5 BAM42243.1 - 6.2e-06 25.4 0.0 1.4 7.8 0.0 4.2 2 2 1 4 4 4 2 WD40 region of Ge1, enhancer of mRNA-decapping protein eIF2A PF08662.11 BAM42243.1 - 1.5e-05 25.0 0.0 0.28 11.0 0.0 2.8 1 1 2 3 3 3 3 Eukaryotic translation initiation factor eIF2A Cytochrom_D1 PF02239.16 BAM42243.1 - 0.00065 18.3 0.1 0.86 8.1 0.1 3.6 1 1 4 5 5 5 2 Cytochrome D1 heme domain SGL PF08450.12 BAM42243.1 - 0.0032 17.1 0.1 0.32 10.5 0.0 2.9 3 0 0 3 3 3 1 SMP-30/Gluconolactonase/LRE-like region PD40 PF07676.12 BAM42243.1 - 0.0081 16.1 1.1 5.3 7.1 0.1 4.1 4 0 0 4 4 4 1 WD40-like Beta Propeller Repeat PQQ_3 PF13570.6 BAM42243.1 - 0.0097 16.4 1.1 0.15 12.6 0.0 3.1 3 0 0 3 3 3 1 PQQ-like domain Nucleoporin_N PF08801.11 BAM42243.1 - 0.08 11.7 1.0 6.8 5.3 0.0 2.9 3 1 0 3 3 3 0 Nup133 N terminal like PALB2_WD40 PF16756.5 BAM42243.1 - 0.081 11.8 2.7 0.34 9.8 0.1 2.6 2 1 1 3 3 3 0 Partner and localizer of BRCA2 WD40 domain Proteasome_A_N PF10584.9 BAM42243.1 - 0.12 12.1 1.7 11 5.8 0.0 3.9 4 0 0 4 4 4 0 Proteasome subunit A N-terminal signature Nup160 PF11715.8 BAM42243.1 - 0.48 9.0 12.2 1.1 7.8 1.0 4.1 3 1 0 4 4 4 0 Nucleoporin Nup120/160 RPAP1_C PF08620.10 BAM42244.1 - 1.2e-18 67.0 0.0 3.1e-18 65.6 0.0 1.8 1 0 0 1 1 1 1 RPAP1-like, C-terminal RPAP1_N PF08621.10 BAM42244.1 - 0.00021 21.0 2.0 0.0006 19.5 2.0 1.8 1 0 0 1 1 1 1 RPAP1-like, N-terminal DUF5423 PF17461.2 BAM42245.1 - 0.0052 15.7 0.8 0.0087 15.0 0.8 1.2 1 0 0 1 1 1 1 Family of unknown function (DUF5423) Death PF00531.22 BAM42245.1 - 0.065 13.4 0.8 0.21 11.7 0.1 2.1 1 1 0 2 2 2 0 Death domain ABC_tran PF00005.27 BAM42246.1 - 8.2e-34 117.1 0.0 1.4e-17 64.4 0.0 2.7 2 1 0 2 2 2 2 ABC transporter RsgA_GTPase PF03193.16 BAM42246.1 - 8.9e-07 29.0 0.4 0.015 15.2 0.1 2.4 2 0 0 2 2 2 2 RsgA GTPase Zeta_toxin PF06414.12 BAM42246.1 - 2.1e-05 23.9 0.3 0.052 12.8 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin MeaB PF03308.16 BAM42246.1 - 8.5e-05 21.7 0.1 0.33 9.9 0.0 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB ABC_membrane PF00664.23 BAM42246.1 - 0.00021 21.0 25.7 0.00021 21.0 25.7 3.7 4 1 0 4 4 2 1 ABC transporter transmembrane region AAA_10 PF12846.7 BAM42246.1 - 0.00042 19.4 0.2 0.84 8.5 0.1 2.3 2 0 0 2 2 2 2 AAA-like domain AAA_29 PF13555.6 BAM42246.1 - 0.00046 19.9 0.1 0.93 9.3 0.0 2.6 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_30 PF13604.6 BAM42246.1 - 0.00069 19.4 0.4 0.035 13.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 BAM42246.1 - 0.0061 16.6 0.4 1.6 8.9 0.1 2.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase T2SSE PF00437.20 BAM42246.1 - 0.014 14.4 0.0 0.48 9.4 0.0 2.3 2 0 0 2 2 2 0 Type II/IV secretion system protein AAA_23 PF13476.6 BAM42246.1 - 0.017 15.6 0.9 2.6 8.5 0.1 2.7 2 0 0 2 2 2 0 AAA domain CitMHS PF03600.16 BAM42246.1 - 0.019 14.2 0.1 0.019 14.2 0.1 3.7 3 1 0 3 3 2 0 Citrate transporter ATP_bind_1 PF03029.17 BAM42246.1 - 0.025 14.4 0.6 8.5 6.1 0.1 2.6 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein cobW PF02492.19 BAM42246.1 - 0.031 13.9 2.2 2.4 7.7 0.2 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_16 PF13191.6 BAM42246.1 - 0.04 14.3 0.1 3.9 7.8 0.0 2.3 2 0 0 2 2 2 0 AAA ATPase domain TsaE PF02367.17 BAM42246.1 - 0.044 13.8 0.4 8 6.5 0.0 2.6 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF815 PF05673.13 BAM42246.1 - 0.045 12.9 0.2 0.94 8.6 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF815) AAA_22 PF13401.6 BAM42246.1 - 0.076 13.3 0.3 16 5.8 0.0 2.7 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 BAM42246.1 - 0.077 12.6 0.1 0.19 11.4 0.1 1.6 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain TrwB_AAD_bind PF10412.9 BAM42246.1 - 0.082 11.8 1.2 4.9 6.0 0.1 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain AAA_25 PF13481.6 BAM42246.1 - 0.13 11.8 0.0 6.4 6.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain SMC_N PF02463.19 BAM42246.1 - 0.15 11.5 1.2 0.88 9.0 0.2 2.6 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_24 PF13479.6 BAM42246.1 - 0.16 11.7 0.2 12 5.6 0.1 2.4 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 BAM42246.1 - 0.16 11.3 0.3 3.4 7.0 0.0 2.2 2 0 0 2 2 2 0 FtsK/SpoIIIE family MobB PF03205.14 BAM42246.1 - 0.2 11.6 2.2 1.4 8.9 0.3 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_33 PF13671.6 BAM42246.1 - 0.24 11.6 1.9 14 5.8 0.0 2.8 3 0 0 3 3 2 0 AAA domain DUF87 PF01935.17 BAM42246.1 - 6 6.9 8.1 5.7 7.0 0.2 2.8 3 0 0 3 3 2 0 Helicase HerA, central domain ABC_tran PF00005.27 BAM42247.1 - 4.4e-35 121.2 0.0 7e-19 68.7 0.0 2.7 2 0 0 2 2 2 2 ABC transporter ABC_membrane PF00664.23 BAM42247.1 - 8.1e-11 42.1 15.6 8.1e-11 42.1 15.6 3.6 4 0 0 4 4 3 1 ABC transporter transmembrane region RsgA_GTPase PF03193.16 BAM42247.1 - 2.7e-06 27.4 1.3 0.025 14.5 0.2 2.4 2 0 0 2 2 2 2 RsgA GTPase MeaB PF03308.16 BAM42247.1 - 2.8e-06 26.5 0.2 0.014 14.4 0.2 2.2 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB Zeta_toxin PF06414.12 BAM42247.1 - 9.1e-06 25.1 0.3 0.024 13.9 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin AAA_29 PF13555.6 BAM42247.1 - 0.00023 20.8 0.2 0.96 9.2 0.0 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_30 PF13604.6 BAM42247.1 - 0.0008 19.2 0.5 0.034 13.9 0.0 2.3 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 BAM42247.1 - 0.0049 17.3 0.1 0.48 10.8 0.0 2.4 2 0 0 2 2 2 1 AAA ATPase domain MMR_HSR1 PF01926.23 BAM42247.1 - 0.0052 16.9 0.4 1.6 8.8 0.1 3.1 2 0 0 2 2 2 1 50S ribosome-binding GTPase T2SSE PF00437.20 BAM42247.1 - 0.0092 15.1 0.7 0.22 10.5 0.1 2.2 2 0 0 2 2 2 1 Type II/IV secretion system protein AAA_23 PF13476.6 BAM42247.1 - 0.014 15.9 0.3 3.1 8.2 0.0 2.7 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.7 BAM42247.1 - 0.02 13.9 0.6 0.86 8.5 0.1 2.2 2 0 0 2 2 2 0 AAA-like domain ATP_bind_1 PF03029.17 BAM42247.1 - 0.03 14.1 0.6 8.7 6.0 0.1 2.5 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein cobW PF02492.19 BAM42247.1 - 0.032 13.8 2.2 2.4 7.7 0.2 2.3 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain TsaE PF02367.17 BAM42247.1 - 0.045 13.8 0.3 7.1 6.7 0.0 2.5 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DUF815 PF05673.13 BAM42247.1 - 0.046 12.9 0.4 0.97 8.5 0.0 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF815) TrwB_AAD_bind PF10412.9 BAM42247.1 - 0.058 12.3 1.1 5 5.9 0.1 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain SRP54 PF00448.22 BAM42247.1 - 0.082 12.5 0.1 0.19 11.3 0.1 1.6 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_7 PF12775.7 BAM42247.1 - 0.083 12.4 1.0 14 5.2 0.2 2.7 2 0 0 2 2 2 0 P-loop containing dynein motor region AAA_33 PF13671.6 BAM42247.1 - 0.084 13.0 1.9 14 5.9 0.0 3.5 4 0 0 4 4 3 0 AAA domain AAA_22 PF13401.6 BAM42247.1 - 0.09 13.1 1.7 13 6.1 0.0 3.3 3 0 0 3 3 3 0 AAA domain SMC_N PF02463.19 BAM42247.1 - 0.11 11.9 0.9 0.9 8.9 0.2 2.5 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_25 PF13481.6 BAM42247.1 - 0.12 11.9 0.0 6.5 6.3 0.0 2.3 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 BAM42247.1 - 0.14 11.5 0.4 3.5 6.9 0.0 2.3 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA_24 PF13479.6 BAM42247.1 - 0.14 11.8 0.1 12 5.5 0.1 2.4 2 0 0 2 2 2 0 AAA domain DUF87 PF01935.17 BAM42247.1 - 0.21 11.6 3.3 5.2 7.1 0.1 2.8 2 0 0 2 2 2 0 Helicase HerA, central domain MobB PF03205.14 BAM42247.1 - 0.69 9.8 4.5 1.4 8.8 0.3 2.7 3 0 0 3 3 2 0 Molybdopterin guanine dinucleotide synthesis protein B WD40 PF00400.32 BAM42248.1 - 1.4e-44 149.2 15.6 3.2e-08 34.1 0.5 8.4 8 1 0 8 8 8 7 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM42248.1 - 3.2e-14 53.0 3.0 9.6e-06 25.8 0.0 4.9 2 1 3 5 5 5 4 Anaphase-promoting complex subunit 4 WD40 domain NLE PF08154.12 BAM42248.1 - 4.4e-07 30.3 1.2 8.2e-07 29.5 1.2 1.5 1 0 0 1 1 1 1 NLE (NUC135) domain Nup160 PF11715.8 BAM42248.1 - 1.5e-06 27.2 4.8 0.12 11.0 0.0 4.0 3 1 1 4 4 4 3 Nucleoporin Nup120/160 DUF4784 PF16023.5 BAM42248.1 - 0.021 13.8 0.0 5.4 5.9 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4784) Cytochrom_D1 PF02239.16 BAM42248.1 - 0.053 12.0 0.0 3.9 5.9 0.0 2.8 1 1 1 2 2 2 0 Cytochrome D1 heme domain WD40_like PF17005.5 BAM42248.1 - 0.078 12.3 0.0 11 5.2 0.0 3.3 3 1 1 4 4 4 0 WD40-like domain PD40 PF07676.12 BAM42248.1 - 0.13 12.2 1.2 0.49 10.4 0.1 2.6 2 0 0 2 2 2 0 WD40-like Beta Propeller Repeat HTH_9 PF08221.11 BAM42249.1 - 3.4e-13 49.5 0.1 1.6e-12 47.4 0.1 2.3 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain TFIIE_alpha PF02002.17 BAM42249.1 - 3.4e-05 23.6 7.2 0.00099 18.9 0.0 4.0 3 1 1 4 4 4 1 TFIIE alpha subunit MotA_activ PF09114.10 BAM42249.1 - 0.024 14.7 0.0 0.16 12.1 0.0 2.2 2 0 0 2 2 2 0 Transcription factor MotA, activation domain Kei1 PF08552.11 BAM42250.1 - 0.00065 19.6 2.0 0.0011 18.9 2.0 1.4 1 0 0 1 1 1 1 Inositolphosphorylceramide synthase subunit Kei1 DuoxA PF10204.9 BAM42250.1 - 0.088 11.8 9.2 0.048 12.7 5.5 2.0 2 0 0 2 2 2 0 Dual oxidase maturation factor Trp_oprn_chp PF09534.10 BAM42250.1 - 0.31 10.8 2.8 2.5 7.8 2.1 2.4 2 1 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF1218 PF06749.12 BAM42250.1 - 9.1 6.9 8.8 3.2 8.3 4.3 2.4 2 1 0 2 2 2 0 Protein of unknown function (DUF1218) Ribosomal_L11_N PF03946.14 BAM42251.1 - 2.7e-22 78.3 0.2 4e-22 77.8 0.2 1.3 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 BAM42251.1 - 1.3e-14 54.4 0.1 2.2e-14 53.7 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain GTP_EFTU PF00009.27 BAM42252.1 - 1.6e-10 40.9 0.0 1.7e-09 37.5 0.0 2.5 1 1 1 2 2 2 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 BAM42252.1 - 1.5e-09 37.9 1.7 1.5e-09 37.9 1.7 2.9 3 0 0 3 3 3 1 Translation-initiation factor 2 MMR_HSR1 PF01926.23 BAM42252.1 - 3.9e-06 26.9 0.0 1.5e-05 25.0 0.0 2.1 1 0 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 BAM42252.1 - 0.00056 19.5 0.0 0.0021 17.6 0.0 2.0 1 1 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU_D2 PF03144.25 BAM42252.1 - 0.012 16.0 0.0 0.14 12.6 0.0 2.7 2 0 0 2 2 2 0 Elongation factor Tu domain 2 Dynamin_N PF00350.23 BAM42252.1 - 0.025 14.7 1.3 11 6.0 0.0 4.0 4 0 0 4 4 4 0 Dynamin family Roc PF08477.13 BAM42252.1 - 0.042 14.1 0.0 0.34 11.1 0.0 2.6 2 1 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase PseudoU_synth_1 PF01416.20 BAM42254.1 - 1.6e-23 83.2 0.0 3.6e-16 59.6 0.0 2.4 2 1 0 2 2 2 2 tRNA pseudouridine synthase DUF2344 PF10105.9 BAM42254.1 - 0.019 14.8 0.0 0.033 14.0 0.0 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2344) Ribosomal_S11 PF00411.19 BAM42255.1 - 1.4e-46 157.4 1.1 1.8e-46 157.1 1.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S11 DUF2252 PF10009.9 BAM42255.1 - 0.018 14.1 0.1 0.019 14.0 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2252) PP-binding_2 PF14573.6 BAM42256.1 - 0.043 14.0 0.0 0.2 11.9 0.0 2.1 2 0 0 2 2 2 0 Acyl-carrier BolA PF01722.18 BAM42257.1 - 2.2e-18 66.3 0.1 4.4e-18 65.3 0.1 1.5 1 1 0 1 1 1 1 BolA-like protein PROCN PF08083.11 BAM42258.1 - 0.21 10.3 0.6 0.31 9.7 0.6 1.1 1 0 0 1 1 1 0 PROCN (NUC071) domain zf-NOSIP PF15906.5 BAM42260.1 - 3.7e-12 46.2 0.1 9.6e-12 44.9 0.1 1.7 2 0 0 2 2 2 1 Zinc-finger of nitric oxide synthase-interacting protein zf-C3HC4_4 PF15227.6 BAM42260.1 - 0.017 15.3 0.8 0.046 13.9 0.8 1.7 1 0 0 1 1 1 0 zinc finger of C3HC4-type, RING zf-RING_UBOX PF13445.6 BAM42260.1 - 0.017 15.2 0.8 0.067 13.2 0.3 2.2 2 0 0 2 2 2 0 RING-type zinc-finger zf-C3HC4_3 PF13920.6 BAM42260.1 - 0.032 14.1 0.4 0.072 13.0 0.4 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 BAM42260.1 - 0.074 12.9 0.5 0.16 11.8 0.5 1.6 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) EssA PF10661.9 BAM42260.1 - 0.45 10.3 10.4 0.97 9.3 10.4 1.5 1 0 0 1 1 1 0 WXG100 protein secretion system (Wss), protein EssA AP2 PF00847.20 BAM42261.1 - 3.1e-12 46.5 5.5 4.5e-07 30.0 0.5 2.9 2 0 0 2 2 2 2 AP2 domain p25-alpha PF05517.12 BAM42262.1 - 1.1e-10 41.9 0.0 1.8e-10 41.2 0.0 1.3 1 0 0 1 1 1 1 p25-alpha eIF2A PF08662.11 BAM42263.1 - 1.9e-29 102.9 0.2 4.2e-23 82.3 0.8 4.5 3 2 0 3 3 3 3 Eukaryotic translation initiation factor eIF2A WD40 PF00400.32 BAM42263.1 - 0.0065 17.3 0.2 13 6.9 0.0 4.7 4 0 0 4 4 4 1 WD domain, G-beta repeat MciZ PF13072.6 BAM42263.1 - 0.13 12.1 3.0 0.17 11.8 1.1 2.2 2 0 0 2 2 2 0 Mother cell inhibitor of FtsZ FapA PF03961.13 BAM42263.1 - 1.5 7.3 3.9 2.2 6.8 3.9 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A CotJB PF12652.7 BAM42263.1 - 5.9 7.2 9.5 30 4.9 9.3 2.2 1 1 0 1 1 1 0 CotJB protein UbiA PF01040.18 BAM42264.1 - 4.9e-40 137.4 10.5 6.4e-40 137.0 10.5 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family SID-1_RNA_chan PF13965.6 BAM42264.1 - 0.098 11.0 0.1 0.14 10.5 0.1 1.2 1 0 0 1 1 1 0 dsRNA-gated channel SID-1 Ribosomal_S24e PF01282.19 BAM42265.1 - 3.3e-31 107.1 0.6 5.2e-31 106.4 0.0 1.7 2 0 0 2 2 2 1 Ribosomal protein S24e DEAD PF00270.29 BAM42267.1 - 7.2e-49 165.9 0.1 2.3e-47 161.0 0.0 2.5 2 1 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 BAM42267.1 - 1.6e-27 96.0 0.1 9.2e-27 93.6 0.1 2.3 1 1 0 1 1 1 1 Helicase conserved C-terminal domain AAA_22 PF13401.6 BAM42267.1 - 0.0021 18.3 0.0 4.7 7.5 0.0 2.9 2 1 0 2 2 2 2 AAA domain RsgA_GTPase PF03193.16 BAM42267.1 - 0.067 13.1 0.0 0.16 11.9 0.0 1.7 1 0 0 1 1 1 0 RsgA GTPase WD40 PF00400.32 BAM42268.1 - 6.4e-23 80.6 13.2 1.6e-05 25.6 2.0 6.6 7 0 0 7 7 7 5 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM42268.1 - 2e-09 37.6 1.7 0.0012 19.1 0.0 4.5 3 1 1 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain Ge1_WD40 PF16529.5 BAM42268.1 - 0.0039 16.2 0.0 0.03 13.3 0.0 2.3 2 1 1 3 3 3 1 WD40 region of Ge1, enhancer of mRNA-decapping protein Nup160 PF11715.8 BAM42268.1 - 0.011 14.4 1.6 0.5 8.9 0.3 2.4 1 1 1 2 2 2 0 Nucleoporin Nup120/160 TFIIIC_delta PF12657.7 BAM42268.1 - 0.03 14.2 1.7 3.4 7.6 0.2 2.6 2 0 0 2 2 2 0 Transcription factor IIIC subunit delta N-term LisH_TPL PF17814.1 BAM42268.1 - 0.056 13.1 0.1 0.18 11.5 0.1 1.9 1 0 0 1 1 1 0 LisH-like dimerisation domain LisH PF08513.11 BAM42268.1 - 0.086 12.8 0.1 0.4 10.7 0.0 2.2 2 0 0 2 2 2 0 LisH PUF PF00806.19 BAM42269.1 - 1.2e-51 169.6 14.0 5.7e-08 32.0 0.0 8.6 8 0 0 8 8 8 8 Pumilio-family RNA binding repeat PRD1_DD PF11087.8 BAM42269.1 - 1.4 8.6 3.3 3.2 7.5 3.3 1.5 1 0 0 1 1 1 0 PRD1 phage membrane DNA delivery CAF1 PF04857.20 BAM42271.1 - 9e-33 113.8 0.0 2.7e-17 62.9 0.0 2.0 1 1 0 2 2 2 2 CAF1 family ribonuclease Cupin_2 PF07883.11 BAM42273.1 - 0.081 12.7 0.0 0.17 11.6 0.0 1.5 1 0 0 1 1 1 0 Cupin domain Ribosomal_S21e PF01249.18 BAM42273.1 - 0.081 13.0 0.0 0.21 11.7 0.0 1.6 1 0 0 1 1 1 0 Ribosomal protein S21e RRN3 PF05327.11 BAM42275.1 - 1.4e-57 195.6 7.3 4.7e-55 187.2 6.6 2.6 2 1 0 2 2 2 2 RNA polymerase I specific transcription initiation factor RRN3 DUF3223 PF11523.8 BAM42275.1 - 6e-11 43.1 0.0 2.1e-10 41.3 0.0 2.1 1 0 0 1 1 1 1 Protein of unknown function (DUF3223) AMMECR1 PF01871.17 BAM42276.1 - 7.2e-39 133.1 0.0 8.4e-39 132.8 0.0 1.0 1 0 0 1 1 1 1 AMMECR1 zf-C3HC4 PF00097.25 BAM42276.1 - 0.061 13.2 1.1 2.9 7.9 1.1 2.6 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_2 PF13923.6 BAM42276.1 - 0.11 12.3 1.9 2.6 8.0 1.9 2.6 1 1 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) Thioredoxin PF00085.20 BAM42278.1 - 7.4e-06 25.9 0.0 1.2e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_8 PF13905.6 BAM42278.1 - 0.0026 18.0 1.4 1.5 9.2 0.3 2.6 1 1 1 2 2 2 2 Thioredoxin-like EF_TS PF00889.19 BAM42279.1 - 2.8e-33 115.3 0.2 1e-21 77.5 0.1 2.2 2 0 0 2 2 2 2 Elongation factor TS Oxidored-like PF09791.9 BAM42279.1 - 0.76 9.5 4.1 0.29 10.8 0.9 1.9 2 0 0 2 2 2 0 Oxidoreductase-like protein, N-terminal Sec1 PF00995.23 BAM42280.1 - 5.4e-98 329.7 13.7 6.3e-98 329.5 13.7 1.0 1 0 0 1 1 1 1 Sec1 family RabGAP-TBC PF00566.18 BAM42281.1 - 4.7e-25 88.5 18.0 4.9e-24 85.2 18.0 2.5 1 1 0 1 1 1 1 Rab-GTPase-TBC domain Fur_reg_FbpB PF13040.6 BAM42281.1 - 0.036 13.6 0.0 0.1 12.2 0.0 1.8 1 0 0 1 1 1 0 Fur-regulated basic protein B ANAPC4_WD40 PF12894.7 BAM42282.1 - 3.8e-05 23.9 0.1 0.00016 21.9 0.1 2.2 1 0 0 1 1 1 1 Anaphase-promoting complex subunit 4 WD40 domain NUC153 PF08159.12 BAM42282.1 - 0.0022 17.8 0.9 0.0047 16.7 0.9 1.5 1 0 0 1 1 1 1 NUC153 domain WD40 PF00400.32 BAM42282.1 - 0.0093 16.8 0.1 6 7.9 0.0 4.3 5 0 0 5 5 5 1 WD domain, G-beta repeat PQQ_2 PF13360.6 BAM42282.1 - 0.031 13.8 0.0 0.11 12.1 0.0 1.9 1 1 1 2 2 2 0 PQQ-like domain Mcm10 PF09332.11 BAM42284.1 - 2.6e-10 40.3 14.2 2.6e-10 40.3 14.2 2.1 1 1 0 2 2 2 1 Mcm10 replication factor zf-primase PF09329.11 BAM42284.1 - 3.6e-08 33.1 2.8 2.5e-07 30.4 1.2 2.9 2 0 0 2 2 2 1 Primase zinc finger DIMCO_N PF16844.5 BAM42284.1 - 0.32 11.4 1.6 0.8 10.1 0.0 2.4 3 0 0 3 3 3 0 Dinitrogenase iron-molybdenum cofactor, N-terminal FYDLN_acid PF09538.10 BAM42284.1 - 0.92 10.2 6.5 0.087 13.5 0.8 2.3 2 0 0 2 2 2 0 Protein of unknown function (FYDLN_acid) Acid_PPase PF12689.7 BAM42285.1 - 7.5e-05 22.6 0.2 0.0017 18.2 0.0 2.2 2 0 0 2 2 2 1 Acid Phosphatase HAD_2 PF13419.6 BAM42285.1 - 0.0079 16.3 2.2 1.5 8.9 0.0 3.4 2 1 1 4 4 4 2 Haloacid dehalogenase-like hydrolase RF-1 PF00472.20 BAM42286.1 - 6.6e-15 55.1 0.1 7.9e-15 54.8 0.1 1.1 1 0 0 1 1 1 1 RF-1 domain PCRF PF03462.18 BAM42287.1 - 7.1e-19 68.4 0.2 4.7e-18 65.7 0.2 1.9 1 1 0 1 1 1 1 PCRF domain RF-1 PF00472.20 BAM42287.1 - 1.6e-07 31.3 0.1 2.8e-07 30.5 0.1 1.3 1 0 0 1 1 1 1 RF-1 domain MIF4G PF02854.19 BAM42288.1 - 1.5e-24 86.8 9.2 9.8e-13 48.2 4.9 2.5 2 0 0 2 2 2 2 MIF4G domain PAM2 PF07145.15 BAM42288.1 - 2.5e-06 26.8 3.7 0.028 14.1 0.1 2.7 1 1 1 2 2 2 2 Ataxin-2 C-terminal region Bystin PF05291.11 BAM42291.1 - 9.1e-95 317.3 3.5 9.1e-95 317.3 3.5 1.4 2 0 0 2 2 2 1 Bystin FliD_N PF02465.18 BAM42291.1 - 0.26 12.0 2.8 2.1 9.1 1.7 2.2 2 0 0 2 2 2 0 Flagellar hook-associated protein 2 N-terminus CCAP PF11105.8 BAM42291.1 - 0.33 10.9 3.1 0.53 10.2 3.1 1.3 1 0 0 1 1 1 0 Arthropod cardioacceleratory peptide 2a Ribosomal_L36e PF01158.18 BAM42292.1 - 7.7e-36 122.2 1.3 9.4e-36 121.9 1.3 1.1 1 0 0 1 1 1 1 Ribosomal protein L36e CLTH PF10607.9 BAM42292.1 - 0.068 13.1 0.1 0.13 12.2 0.1 1.4 1 1 1 2 2 2 0 CTLH/CRA C-terminal to LisH motif domain TUG-UBL1 PF11470.8 BAM42292.1 - 0.16 12.2 0.3 2.8 8.3 0.0 2.5 2 1 1 3 3 3 0 TUG ubiquitin-like domain DUF2423 PF10338.9 BAM42293.1 - 0.0032 17.6 0.1 0.0032 17.6 0.1 2.6 2 0 0 2 2 2 1 Protein of unknown function (DUF2423) BCL9 PF11502.8 BAM42293.1 - 0.11 12.3 0.0 0.24 11.2 0.0 1.5 1 0 0 1 1 1 0 B-cell lymphoma 9 protein MitMem_reg PF13012.6 BAM42294.1 - 3.5e-28 98.2 0.7 5.9e-28 97.5 0.7 1.4 1 0 0 1 1 1 1 Maintenance of mitochondrial structure and function JAB PF01398.21 BAM42294.1 - 1.9e-26 92.3 0.3 8.6e-26 90.2 0.1 1.9 2 0 0 2 2 2 1 JAB1/Mov34/MPN/PAD-1 ubiquitin protease SKA1 PF07160.12 BAM42294.1 - 0.12 12.2 0.4 5.9 6.7 0.1 2.1 2 0 0 2 2 2 0 Spindle and kinetochore-associated protein 1 Baculo_PEP_C PF04513.12 BAM42294.1 - 1.4 9.0 4.8 0.67 10.0 0.3 2.0 1 1 1 2 2 2 0 Baculovirus polyhedron envelope protein, PEP, C terminus DnaJ PF00226.31 BAM42295.1 - 6.6e-18 64.6 1.6 6.6e-18 64.6 1.6 2.1 2 0 0 2 2 2 1 DnaJ domain PSD5 PF07637.11 BAM42295.1 - 0.006 16.9 0.2 0.48 10.8 0.1 2.8 3 0 0 3 3 3 1 Protein of unknown function (DUF1595) Nucleoporin_FG PF13634.6 BAM42296.1 - 1.8e-22 79.9 187.0 3.2e-08 34.3 28.9 4.2 1 1 4 5 5 5 5 Nucleoporin FG repeat region Med26 PF08711.11 BAM42297.1 - 6.2e-06 26.1 0.0 1.9e-05 24.6 0.0 1.9 1 0 0 1 1 1 1 TFIIS helical bundle-like domain MS_channel PF00924.18 BAM42299.1 - 9.5e-10 38.4 3.6 3e-09 36.7 3.6 1.9 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF2418 PF10332.9 BAM42299.1 - 0.16 12.5 0.1 0.16 12.5 0.1 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2418) Rad51 PF08423.11 BAM42300.1 - 5.1e-116 386.4 0.0 8.7e-116 385.6 0.0 1.4 2 0 0 2 2 2 1 Rad51 RecA PF00154.21 BAM42300.1 - 5.4e-09 35.9 0.0 7.7e-09 35.4 0.0 1.1 1 0 0 1 1 1 1 recA bacterial DNA recombination protein AAA_25 PF13481.6 BAM42300.1 - 3.7e-06 26.7 0.0 6.9e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain ATPase PF06745.13 BAM42300.1 - 0.00011 21.7 0.9 0.00048 19.6 0.9 2.1 1 1 0 1 1 1 1 KaiC HHH_5 PF14520.6 BAM42300.1 - 0.11 13.1 0.0 0.25 12.0 0.0 1.6 1 0 0 1 1 1 0 Helix-hairpin-helix domain AAA_22 PF13401.6 BAM42300.1 - 0.12 12.6 0.1 0.29 11.4 0.1 1.5 1 1 0 1 1 1 0 AAA domain AAA_24 PF13479.6 BAM42300.1 - 0.22 11.2 0.0 0.33 10.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain Pescadillo_N PF06732.11 BAM42301.1 - 4.8e-81 272.3 0.0 4.8e-81 272.3 0.0 1.4 2 0 0 2 2 2 1 Pescadillo N-terminus BRCT_2 PF16589.5 BAM42301.1 - 1.7e-07 31.6 0.0 4.3e-07 30.3 0.0 1.8 1 0 0 1 1 1 1 BRCT domain, a BRCA1 C-terminus domain LIG3_BRCT PF16759.5 BAM42301.1 - 0.066 13.5 0.0 0.14 12.5 0.0 1.5 1 0 0 1 1 1 0 DNA ligase 3 BRCT domain MS_channel PF00924.18 BAM42303.1 - 1.6e-17 63.8 0.8 3.4e-17 62.7 0.8 1.6 1 0 0 1 1 1 1 Mechanosensitive ion channel DUF2953 PF11167.8 BAM42303.1 - 0.029 14.4 0.1 0.44 10.7 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF2953) Ribosomal_S19e PF01090.19 BAM42305.1 - 0.037 13.7 0.2 0.047 13.4 0.2 1.1 1 0 0 1 1 1 0 Ribosomal protein S19e Bromodomain PF00439.25 BAM42307.1 - 1.3e-18 66.8 1.2 4.7e-18 65.0 0.3 2.3 2 0 0 2 2 2 1 Bromodomain RNase_H2-Ydr279 PF09468.10 BAM42308.1 - 0.29 11.3 5.6 0.088 13.0 0.5 2.7 3 0 0 3 3 3 0 Ydr279p protein family (RNase H2 complex component) wHTH domain Mago_nashi PF02792.14 BAM42309.1 - 6.1e-69 230.6 0.6 6.7e-69 230.5 0.6 1.0 1 0 0 1 1 1 1 Mago nashi protein PQQ_3 PF13570.6 BAM42310.1 - 0.0014 19.0 0.2 1.4 9.5 0.0 3.4 2 1 1 3 3 3 2 PQQ-like domain START PF01852.19 BAM42311.1 - 1.2e-05 24.8 0.0 2e-05 24.1 0.0 1.3 1 0 0 1 1 1 1 START domain SMYLE_N PF18615.1 BAM42311.1 - 0.07 12.7 0.6 0.085 12.4 0.6 1.2 1 0 0 1 1 1 0 Short myomegalin-like EB1 binding proteins, N-terminal domain DnaGprimase_HBD PF16730.5 BAM42311.1 - 0.071 13.2 0.1 0.15 12.1 0.1 1.5 1 0 0 1 1 1 0 DnaG-primase C-terminal, helicase-binding domain EMC3_TMCO1 PF01956.16 BAM42311.1 - 0.094 12.4 0.2 0.3 10.8 0.0 1.9 2 0 0 2 2 2 0 Integral membrane protein EMC3/TMCO1-like DUF1754 PF08555.10 BAM42311.1 - 0.83 10.5 12.6 1.8 9.4 12.6 1.5 1 0 0 1 1 1 0 Eukaryotic family of unknown function (DUF1754) Tom22 PF04281.13 BAM42312.1 - 0.039 13.7 0.7 0.08 12.7 0.7 1.6 1 0 0 1 1 1 0 Mitochondrial import receptor subunit Tom22 zf-CCCH_2 PF14608.6 BAM42313.1 - 2.1e-12 47.0 18.3 1.8e-06 28.2 5.0 2.5 2 0 0 2 2 2 2 RNA-binding, Nab2-type zinc finger zf-CCCH_4 PF18044.1 BAM42313.1 - 4.6e-07 29.5 11.9 0.0015 18.3 2.1 2.3 2 0 0 2 2 2 2 CCCH-type zinc finger zf-CCCH PF00642.24 BAM42313.1 - 3.6e-05 23.5 8.2 0.012 15.5 0.7 2.6 2 1 0 2 2 2 2 Zinc finger C-x8-C-x5-C-x3-H type (and similar) zf_CCCH_4 PF18345.1 BAM42313.1 - 0.0074 16.3 1.0 0.0074 16.3 1.0 2.9 3 0 0 3 3 3 2 Zinc finger domain zf-CCHH PF10283.9 BAM42313.1 - 0.28 11.2 7.7 0.75 9.8 0.5 3.0 2 0 0 2 2 2 0 PBZ domain AMP-binding PF00501.28 BAM42314.1 - 1.1e-86 291.0 0.1 1.4e-86 290.7 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 BAM42314.1 - 1.3e-20 73.0 3.0 1.9e-20 72.5 1.8 2.0 2 0 0 2 2 2 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 BAM42314.1 - 6.5e-20 71.9 0.0 2.3e-19 70.1 0.0 1.9 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain HEAT_EZ PF13513.6 BAM42315.1 - 3.8e-08 33.7 0.0 5.4e-05 23.6 0.0 4.1 5 0 0 5 5 5 1 HEAT-like repeat HEAT PF02985.22 BAM42315.1 - 9e-08 31.7 1.3 3.5 8.1 0.0 7.2 6 0 0 6 6 6 2 HEAT repeat IBN_N PF03810.19 BAM42315.1 - 2.1e-05 24.3 1.4 0.00014 21.7 1.4 2.6 1 0 0 1 1 1 1 Importin-beta N-terminal domain Vac14_Fab1_bd PF12755.7 BAM42315.1 - 0.00055 20.5 0.6 0.43 11.2 0.0 4.7 3 1 1 4 4 4 1 Vacuolar 14 Fab1-binding region Cnd1 PF12717.7 BAM42315.1 - 0.029 14.4 0.9 0.28 11.2 0.0 3.1 4 0 0 4 4 4 0 non-SMC mitotic condensation complex subunit 1 HEAT_2 PF13646.6 BAM42315.1 - 0.071 13.5 0.0 0.51 10.8 0.0 2.6 2 0 0 2 2 2 0 HEAT repeats Thioredoxin PF00085.20 BAM42316.1 - 2.9e-16 59.3 0.0 3.3e-16 59.1 0.0 1.0 1 0 0 1 1 1 1 Thioredoxin OST3_OST6 PF04756.13 BAM42316.1 - 0.0014 18.1 0.0 0.0015 17.9 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family VP4_helical PF17478.2 BAM42316.1 - 0.021 14.3 0.0 0.022 14.2 0.0 1.0 1 0 0 1 1 1 0 Rotavirus VP4 helical domain Phosducin PF02114.16 BAM42316.1 - 0.021 13.8 0.0 0.024 13.6 0.0 1.1 1 0 0 1 1 1 0 Phosducin Thioredoxin_3 PF13192.6 BAM42316.1 - 0.021 14.9 0.0 0.023 14.7 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin domain Thioredoxin_8 PF13905.6 BAM42316.1 - 0.026 14.8 0.0 0.28 11.6 0.0 1.9 1 1 1 2 2 2 0 Thioredoxin-like Thioredoxin_2 PF13098.6 BAM42316.1 - 0.035 14.6 0.0 0.042 14.3 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain EF-hand_13 PF17958.1 BAM42316.1 - 0.035 13.9 0.0 0.044 13.6 0.0 1.2 1 0 0 1 1 1 0 EF-hand domain HyaE PF07449.11 BAM42316.1 - 0.036 14.0 0.0 0.042 13.8 0.0 1.2 1 0 0 1 1 1 0 Hydrogenase-1 expression protein HyaE Thioredoxin_9 PF14595.6 BAM42316.1 - 0.16 11.7 0.0 0.19 11.5 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin DUF167 PF02594.16 BAM42317.1 - 5.3e-12 45.7 0.0 1.1e-11 44.7 0.0 1.5 1 0 0 1 1 1 1 Uncharacterised ACR, YggU family COG1872 H_PPase PF03030.16 BAM42317.1 - 8.7e-10 37.9 34.3 8.7e-10 37.9 34.3 2.9 2 1 0 2 2 2 1 Inorganic H+ pyrophosphatase STAG PF08514.11 BAM42319.1 - 3.4e-10 39.8 1.9 2.8e-09 36.9 0.1 3.1 2 0 0 2 2 2 1 STAG domain ACDC PF14733.6 BAM42319.1 - 0.038 14.3 0.6 0.23 11.8 0.6 2.4 1 0 0 1 1 1 0 AP2-coincident C-terminal Adaptin_N PF01602.20 BAM42320.1 - 6.2e-71 239.5 13.2 2e-69 234.6 7.2 2.1 2 0 0 2 2 2 2 Adaptin N terminal region HEAT_2 PF13646.6 BAM42320.1 - 1.2e-05 25.6 0.1 0.022 15.1 0.0 3.8 4 0 0 4 4 4 2 HEAT repeats Cnd1 PF12717.7 BAM42320.1 - 0.0001 22.4 4.5 0.0041 17.2 0.3 3.2 2 0 0 2 2 2 2 non-SMC mitotic condensation complex subunit 1 HEAT PF02985.22 BAM42320.1 - 0.00027 20.9 0.1 0.027 14.7 0.0 4.0 4 0 0 4 4 4 1 HEAT repeat M11L PF11099.8 BAM42320.1 - 0.078 13.2 0.0 0.078 13.2 0.0 3.2 4 0 0 4 4 4 0 Apoptosis regulator M11L like HEAT_EZ PF13513.6 BAM42320.1 - 0.11 13.1 0.1 4.6 7.9 0.0 3.6 4 0 0 4 4 4 0 HEAT-like repeat Hormone_1 PF00103.20 BAM42320.1 - 5.3 6.7 8.0 0.2 11.4 0.1 2.6 3 0 0 3 3 3 0 Somatotropin hormone family C2 PF00168.30 BAM42321.1 - 1.8e-08 34.6 0.1 0.0053 17.0 0.0 4.8 6 0 0 6 6 6 2 C2 domain Ferlin_C PF16165.5 BAM42321.1 - 0.016 15.2 0.0 0.034 14.1 0.0 1.5 1 0 0 1 1 1 0 Ferlin C-terminus DUF3489 PF11994.8 BAM42321.1 - 0.078 13.1 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3489) DUF2175 PF09943.9 BAM42322.1 - 0.079 13.3 0.6 1.1 9.6 0.1 2.8 2 1 1 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2175) BSD PF03909.17 BAM42322.1 - 0.12 12.4 0.0 0.65 10.0 0.0 2.2 2 0 0 2 2 2 0 BSD domain LCCL PF03815.19 BAM42323.1 - 1.4e-17 63.6 0.1 1.4e-17 63.6 0.1 3.7 4 0 0 4 4 4 1 LCCL domain F5_F8_type_C PF00754.25 BAM42323.1 - 2.7e-13 50.1 3.7 1.4e-06 28.5 0.9 2.6 2 0 0 2 2 2 2 F5/8 type C domain Ricin_B_lectin PF00652.22 BAM42323.1 - 2.5e-10 40.7 1.7 6.3e-09 36.2 0.8 3.3 2 1 0 2 2 2 1 Ricin-type beta-trefoil lectin domain DUF4200 PF13863.6 BAM42323.1 - 0.00082 19.8 7.8 0.00082 19.8 7.8 3.4 3 1 0 3 3 3 1 Domain of unknown function (DUF4200) CarD_CdnL_TRCF PF02559.16 BAM42323.1 - 0.067 13.9 1.9 0.43 11.3 1.8 2.4 2 0 0 2 2 2 0 CarD-like/TRCF domain PKcGMP_CC PF16808.5 BAM42323.1 - 1.1 9.1 4.2 2.7 7.9 4.2 1.6 1 0 0 1 1 1 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Ndc1_Nup PF09531.10 BAM42323.1 - 7.1 5.2 11.2 13 4.4 11.2 1.3 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup Steroid_dh PF02544.16 BAM42324.1 - 8.8e-09 35.5 2.8 8.8e-09 35.5 2.8 2.1 2 2 1 3 3 3 1 3-oxo-5-alpha-steroid 4-dehydrogenase FAD_SOX PF18371.1 BAM42325.1 - 0.14 12.5 0.0 0.24 11.8 0.0 1.4 1 0 0 1 1 1 0 Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase Rhomboid_N PF12122.8 BAM42326.1 - 0.28 11.4 1.6 0.38 11.0 0.2 2.0 2 0 0 2 2 2 0 Cytoplasmic N-terminal domain of rhomboid serine protease Arm PF00514.23 BAM42328.1 - 9.8e-05 22.3 1.5 0.28 11.3 0.1 3.9 3 0 0 3 3 3 1 Armadillo/beta-catenin-like repeat Arm_3 PF16186.5 BAM42328.1 - 0.00028 20.4 0.1 0.0096 15.5 0.0 2.5 2 0 0 2 2 2 1 Atypical Arm repeat V-ATPase_H_C PF11698.8 BAM42328.1 - 0.02 15.0 2.7 0.49 10.5 0.1 3.4 2 1 1 3 3 3 0 V-ATPase subunit H HlyIII PF03006.20 BAM42329.1 - 1.9e-20 73.6 19.1 2.3e-20 73.3 19.1 1.0 1 0 0 1 1 1 1 Haemolysin-III related HlyIII PF03006.20 BAM42330.1 - 8e-17 61.7 19.3 9.9e-17 61.4 19.3 1.0 1 0 0 1 1 1 1 Haemolysin-III related HlyIII PF03006.20 BAM42331.1 - 4e-11 43.1 11.3 4.6e-11 42.9 11.3 1.0 1 0 0 1 1 1 1 Haemolysin-III related HlyIII PF03006.20 BAM42332.1 - 2.4e-05 24.2 1.4 3.3e-05 23.7 1.4 1.2 1 0 0 1 1 1 1 Haemolysin-III related HlyIII PF03006.20 BAM42333.1 - 2.5e-19 69.9 22.3 3e-19 69.6 22.3 1.0 1 0 0 1 1 1 1 Haemolysin-III related 7TMR-DISM_7TM PF07695.11 BAM42333.1 - 0.005 16.7 28.7 0.007 16.3 28.7 1.2 1 0 0 1 1 1 1 7TM diverse intracellular signalling PMP22_Claudin PF00822.20 BAM42333.1 - 0.0058 16.5 0.1 0.0058 16.5 0.1 2.0 2 1 1 3 3 3 1 PMP-22/EMP/MP20/Claudin family Herpes_LMP1 PF05297.11 BAM42333.1 - 4.2 6.5 8.4 5.2 6.2 8.4 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) HlyIII PF03006.20 BAM42334.1 - 2.1e-24 86.5 15.7 2.7e-24 86.1 15.7 1.0 1 0 0 1 1 1 1 Haemolysin-III related 7TMR-DISM_7TM PF07695.11 BAM42334.1 - 3.9 7.3 27.9 5.5 6.8 27.9 1.2 1 0 0 1 1 1 0 7TM diverse intracellular signalling HlyIII PF03006.20 BAM42335.1 - 4.9e-10 39.5 17.4 6.4e-10 39.1 17.4 1.1 1 0 0 1 1 1 1 Haemolysin-III related QueT PF06177.11 BAM42336.1 - 1.1 9.6 10.0 0.45 10.9 7.0 1.9 1 1 1 2 2 2 0 QueT transporter WD40 PF00400.32 BAM42338.1 - 1.8e-06 28.6 8.5 0.0013 19.5 0.1 4.8 5 0 0 5 5 5 2 WD domain, G-beta repeat FAST_1 PF06743.15 BAM42338.1 - 0.00022 21.1 2.2 7.1 6.7 0.0 4.7 5 0 0 5 5 5 1 FAST kinase-like protein, subdomain 1 DUF977 PF06163.11 BAM42338.1 - 0.077 12.9 0.0 0.18 11.7 0.0 1.6 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) NadA PF02445.16 BAM42338.1 - 3 6.9 6.0 3.9 6.6 0.3 2.5 2 1 1 3 3 3 0 Quinolinate synthetase A protein NAP PF00956.18 BAM42339.1 - 1.1e-23 83.8 2.8 1.1e-23 83.8 2.8 1.9 1 1 1 2 2 2 1 Nucleosome assembly protein (NAP) DUF4612 PF15389.6 BAM42339.1 - 0.098 13.7 0.3 0.21 12.7 0.3 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4612) ColG_sub PF18496.1 BAM42339.1 - 0.11 12.7 1.3 0.22 11.7 1.3 1.5 1 0 0 1 1 1 0 Collagenase G catalytic helper subdomain WD40 PF00400.32 BAM42341.1 - 1.1e-19 70.4 21.2 0.00022 21.9 0.2 7.7 7 1 0 7 7 7 6 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM42341.1 - 0.00036 20.8 0.3 0.34 11.2 0.0 4.5 3 1 3 6 6 6 1 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 BAM42341.1 - 0.026 13.9 0.5 0.51 9.6 0.0 2.7 2 1 1 3 3 3 0 WD40-like domain SF-assemblin PF06705.11 BAM42343.1 - 5.6e-40 137.2 31.9 7.5e-40 136.8 31.3 1.4 2 0 0 2 2 2 1 SF-assemblin/beta giardin DUF4407 PF14362.6 BAM42343.1 - 0.12 11.8 13.4 0.017 14.5 5.3 2.9 2 1 1 3 3 3 0 Domain of unknown function (DUF4407) Baculo_PEP_C PF04513.12 BAM42343.1 - 0.2 11.7 22.8 1.7 8.7 3.4 3.7 1 1 3 4 4 4 0 Baculovirus polyhedron envelope protein, PEP, C terminus Nup54 PF13874.6 BAM42343.1 - 0.32 11.1 18.7 0.028 14.5 7.6 2.8 1 1 0 2 2 2 0 Nucleoporin complex subunit 54 HLH PF00010.26 BAM42343.1 - 1.2 9.2 8.4 0.31 11.0 1.8 2.9 3 0 0 3 3 3 0 Helix-loop-helix DNA-binding domain Cor1 PF04803.12 BAM42343.1 - 1.3 9.3 26.6 0.65 10.2 8.2 3.5 2 1 1 3 3 3 0 Cor1/Xlr/Xmr conserved region Phasin PF05597.11 BAM42343.1 - 1.5 8.9 14.8 2.6 8.1 2.8 2.7 1 1 0 2 2 2 0 Poly(hydroxyalcanoate) granule associated protein (phasin) DUF745 PF05335.13 BAM42343.1 - 4.6 6.9 14.4 7.8 6.2 3.6 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF745) DUF883 PF05957.13 BAM42343.1 - 4.6 7.9 5.3 30 5.3 0.1 3.4 1 1 2 3 3 3 0 Bacterial protein of unknown function (DUF883) DUF1870 PF08965.10 BAM42343.1 - 4.8 7.2 8.2 2.1 8.4 1.3 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF1870) SNAPc_SNAP43 PF09808.9 BAM42343.1 - 6.2 6.7 14.9 0.98 9.3 10.4 2.0 2 1 0 2 2 2 0 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 NPV_P10 PF05531.12 BAM42343.1 - 6.6 7.3 16.6 0.58 10.7 2.8 4.0 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein YvrJ PF12841.7 BAM42343.1 - 7.4 6.2 5.7 17 5.0 0.1 3.7 3 1 1 4 4 4 0 YvrJ protein family Muted PF14942.6 BAM42343.1 - 8.2 6.8 27.7 2.5e+02 2.0 22.5 3.2 2 1 0 2 2 2 0 Organelle biogenesis, Muted-like protein AI-2E_transport PF01594.16 BAM42343.1 - 9.9 5.2 6.1 1.3 8.1 0.6 2.2 2 1 0 2 2 2 0 AI-2E family transporter CTP_transf_like PF01467.26 BAM42346.1 - 4.3e-37 127.5 0.0 7e-18 65.2 0.0 2.3 2 0 0 2 2 2 2 Cytidylyltransferase-like FAD_syn PF06574.12 BAM42346.1 - 0.001 19.0 0.2 3.8 7.4 0.0 3.4 2 1 0 2 2 2 2 FAD synthetase GCD14 PF08704.10 BAM42347.1 - 4.7 6.8 6.4 0.42 10.2 1.9 1.7 2 0 0 2 2 2 0 tRNA methyltransferase complex GCD14 subunit LRAT PF04970.13 BAM42348.1 - 0.0082 16.4 3.9 6.7 7.0 0.1 3.6 3 0 0 3 3 3 2 Lecithin retinol acyltransferase DUF3895 PF13034.6 BAM42348.1 - 0.012 15.6 0.2 0.069 13.2 0.2 2.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3895) Glutaredoxin PF00462.24 BAM42348.1 - 0.064 13.5 0.0 0.48 10.7 0.0 2.6 2 0 0 2 2 2 0 Glutaredoxin CPW_WPC PF09717.10 BAM42349.1 - 4.4e-68 226.1 75.3 2.9e-13 50.6 6.4 8.3 8 0 0 8 8 8 8 Plasmodium falciparum domain of unknown function (CPW_WPC) DUF3284 PF11687.8 BAM42349.1 - 0.13 12.1 0.5 0.43 10.5 0.5 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF3284) MMS1_N PF10433.9 BAM42350.1 - 6.1e-138 460.5 0.4 1.5e-137 459.2 0.0 1.8 2 0 0 2 2 2 1 Mono-functional DNA-alkylating methyl methanesulfonate N-term CPSF_A PF03178.15 BAM42350.1 - 1.9e-66 224.6 6.0 5.8e-58 196.7 0.3 3.9 4 0 0 4 4 4 3 CPSF A subunit region Collagen PF01391.18 BAM42350.1 - 0.00014 21.5 7.7 0.00033 20.3 7.7 1.5 1 0 0 1 1 1 1 Collagen triple helix repeat (20 copies) Ran_BP1 PF00638.18 BAM42352.1 - 4.6e-38 130.2 0.9 4.6e-38 130.2 0.9 2.0 2 0 0 2 2 2 1 RanBP1 domain ApoLp-III PF07464.11 BAM42352.1 - 0.0029 17.7 6.9 0.022 14.8 6.7 2.3 1 1 0 1 1 1 1 Apolipophorin-III precursor (apoLp-III) YtxH PF12732.7 BAM42352.1 - 0.0087 16.6 14.3 20 5.8 10.5 3.6 2 1 0 2 2 2 0 YtxH-like protein DUF4777 PF16007.5 BAM42352.1 - 0.017 15.3 0.8 6.1 7.2 0.0 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4777) Skp1 PF01466.19 BAM42352.1 - 0.018 15.2 1.1 7.9 6.7 0.0 3.8 3 0 0 3 3 3 0 Skp1 family, dimerisation domain Apolipoprotein PF01442.18 BAM42352.1 - 0.02 14.7 0.0 0.034 14.0 0.0 1.3 1 0 0 1 1 1 0 Apolipoprotein A1/A4/E domain NOG1_N PF17835.1 BAM42352.1 - 0.022 14.7 0.2 0.78 9.7 0.1 2.4 2 0 0 2 2 2 0 NOG1 N-terminal helical domain HisKA_3 PF07730.13 BAM42352.1 - 0.034 14.7 0.0 0.096 13.2 0.0 1.7 1 0 0 1 1 1 0 Histidine kinase Prominin PF05478.11 BAM42352.1 - 0.06 11.3 0.7 0.083 10.8 0.7 1.1 1 0 0 1 1 1 0 Prominin CheZ PF04344.13 BAM42352.1 - 0.073 13.0 0.9 0.18 11.7 0.8 1.6 1 1 0 1 1 1 0 Chemotaxis phosphatase, CheZ CsbD PF05532.12 BAM42352.1 - 0.1 12.5 0.2 0.1 12.5 0.2 2.8 3 1 0 3 3 3 0 CsbD-like DUF953 PF06110.11 BAM42352.1 - 0.19 11.4 2.7 0.28 10.8 1.7 1.9 1 1 0 1 1 1 0 Eukaryotic protein of unknown function (DUF953) DUF948 PF06103.11 BAM42352.1 - 0.34 11.2 6.0 5.7 7.3 2.1 2.6 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) DUF2884 PF11101.8 BAM42352.1 - 0.42 10.1 4.6 0.78 9.2 4.6 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2884) Senescence PF06911.12 BAM42352.1 - 0.79 10.0 4.2 6 7.1 4.2 2.2 1 1 0 1 1 1 0 Senescence-associated protein Gp-FAR-1 PF05823.12 BAM42352.1 - 1 9.7 8.1 4.4 7.7 1.0 2.7 2 1 1 3 3 3 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) ApoC-I PF04691.12 BAM42352.1 - 1.5 8.8 8.7 0.78 9.7 1.6 3.2 2 1 2 4 4 4 0 Apolipoprotein C-I (ApoC-1) Ribosomal_L7Ae PF01248.26 BAM42353.1 - 7.5e-17 60.9 0.1 1.3e-16 60.1 0.1 1.3 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family Sterol_MT_C PF08498.10 BAM42353.1 - 0.11 12.8 0.0 0.21 11.9 0.0 1.4 1 0 0 1 1 1 0 Sterol methyltransferase C-terminal Msg2_C PF12373.8 BAM42353.1 - 0.19 11.2 1.1 4.6 6.7 0.1 2.3 2 0 0 2 2 2 0 Major surface glycoprotein 2 C terminal Glutaredoxin PF00462.24 BAM42354.1 - 3.8e-09 36.6 0.0 4.7e-09 36.3 0.0 1.1 1 0 0 1 1 1 1 Glutaredoxin DUF562 PF04763.12 BAM42354.1 - 0.17 11.3 0.2 0.22 11.0 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF562) AP2 PF00847.20 BAM42355.1 - 1.6e-15 57.0 0.0 3.3e-15 56.1 0.0 1.6 1 0 0 1 1 1 1 AP2 domain AAA_2 PF07724.14 BAM42356.1 - 4.1e-55 186.5 0.1 3.3e-52 177.1 0.0 2.8 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_lid_9 PF17871.1 BAM42356.1 - 1.5e-32 111.6 1.1 1.5e-32 111.6 1.1 3.6 3 1 2 5 5 3 1 AAA lid domain ClpB_D2-small PF10431.9 BAM42356.1 - 1.8e-26 92.0 0.2 1.2e-25 89.3 0.2 2.7 1 0 0 1 1 1 1 C-terminal, D2-small domain, of ClpB protein AAA PF00004.29 BAM42356.1 - 3.3e-25 89.0 0.0 9.2e-14 52.0 0.0 2.8 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) Clp_N PF02861.20 BAM42356.1 - 1.5e-17 63.4 0.0 4e-11 42.9 0.0 2.7 2 0 0 2 2 2 2 Clp amino terminal domain, pathogenicity island component AAA_5 PF07728.14 BAM42356.1 - 2.5e-17 63.2 0.0 4.2e-12 46.2 0.0 3.5 3 0 0 3 3 3 2 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 BAM42356.1 - 2e-10 41.3 0.1 0.00037 20.9 0.0 3.7 2 2 0 2 2 2 2 AAA ATPase domain Sigma54_activat PF00158.26 BAM42356.1 - 7.7e-10 38.7 0.0 4.4e-07 29.8 0.0 2.7 2 1 0 2 2 2 1 Sigma-54 interaction domain AAA_14 PF13173.6 BAM42356.1 - 1.9e-08 34.4 0.8 0.011 15.8 0.0 3.8 3 1 1 4 4 4 2 AAA domain AAA_18 PF13238.6 BAM42356.1 - 1.3e-07 32.2 2.3 0.063 13.8 0.0 4.8 4 0 0 4 4 4 2 AAA domain Torsin PF06309.11 BAM42356.1 - 3e-07 30.6 0.0 2.4e-06 27.7 0.0 2.4 2 0 0 2 2 2 1 Torsin IstB_IS21 PF01695.17 BAM42356.1 - 6.8e-07 29.2 0.0 0.037 13.7 0.0 2.9 2 0 0 2 2 2 2 IstB-like ATP binding protein RuvB_N PF05496.12 BAM42356.1 - 2.5e-06 27.3 0.3 0.34 10.6 0.0 4.3 4 0 0 4 4 4 2 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 BAM42356.1 - 3.7e-06 27.2 3.2 0.41 10.9 0.0 5.2 4 2 0 4 4 4 2 AAA domain Mg_chelatase PF01078.21 BAM42356.1 - 8.6e-05 22.0 0.0 0.94 8.8 0.0 3.4 2 1 0 2 2 2 2 Magnesium chelatase, subunit ChlI Roc PF08477.13 BAM42356.1 - 0.0001 22.5 0.0 0.37 11.0 0.0 3.0 2 0 0 2 2 2 2 Ras of Complex, Roc, domain of DAPkinase AAA_7 PF12775.7 BAM42356.1 - 0.00017 21.2 0.0 0.11 12.0 0.0 2.7 2 0 0 2 2 2 1 P-loop containing dynein motor region ResIII PF04851.15 BAM42356.1 - 0.00019 21.5 0.0 0.029 14.4 0.0 3.6 3 0 0 3 3 3 1 Type III restriction enzyme, res subunit RNA_helicase PF00910.22 BAM42356.1 - 0.00031 21.1 0.1 0.86 10.0 0.0 3.3 3 0 0 3 3 2 1 RNA helicase ATPase_2 PF01637.18 BAM42356.1 - 0.00047 20.2 11.6 3.5 7.5 0.0 5.5 5 2 1 6 6 4 2 ATPase domain predominantly from Archaea Zeta_toxin PF06414.12 BAM42356.1 - 0.00053 19.3 0.0 0.085 12.1 0.0 2.7 2 0 0 2 2 2 1 Zeta toxin TsaE PF02367.17 BAM42356.1 - 0.0012 18.8 0.0 0.95 9.5 0.0 2.7 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE RsgA_GTPase PF03193.16 BAM42356.1 - 0.002 18.1 1.0 2.6 7.9 0.0 3.5 3 1 0 3 3 3 1 RsgA GTPase NACHT PF05729.12 BAM42356.1 - 0.0026 17.7 0.0 0.63 9.9 0.0 2.6 2 0 0 2 2 2 1 NACHT domain DNA_pol3_delta2 PF13177.6 BAM42356.1 - 0.0052 16.6 0.0 3.8 7.3 0.0 3.3 3 0 0 3 3 3 1 DNA polymerase III, delta subunit AAA_24 PF13479.6 BAM42356.1 - 0.0066 16.2 0.0 2.5 7.8 0.0 2.8 2 0 0 2 2 2 1 AAA domain ABC_tran PF00005.27 BAM42356.1 - 0.0073 16.8 6.4 0.14 12.7 0.0 4.6 5 1 0 5 5 3 1 ABC transporter AAA_3 PF07726.11 BAM42356.1 - 0.0098 15.8 0.1 1.5 8.7 0.0 3.2 3 1 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) Bac_DnaA PF00308.18 BAM42356.1 - 0.011 15.5 0.0 1 9.2 0.0 3.0 3 0 0 3 3 2 0 Bacterial dnaA protein AAA_28 PF13521.6 BAM42356.1 - 0.015 15.5 0.0 12 6.2 0.0 3.3 3 0 0 3 3 3 0 AAA domain AAA_33 PF13671.6 BAM42356.1 - 0.018 15.2 0.0 2.4 8.3 0.0 2.9 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 BAM42356.1 - 0.055 13.0 0.1 0.32 10.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 BAM42356.1 - 0.091 12.7 2.0 21 5.0 0.0 4.0 4 0 0 4 4 4 0 NTPase AAA_19 PF13245.6 BAM42356.1 - 0.16 12.3 0.1 12 6.3 0.0 3.2 3 1 0 3 3 2 0 AAA domain AAA_17 PF13207.6 BAM42356.1 - 0.5 10.8 4.0 37 4.8 0.0 4.1 3 1 0 3 3 3 0 AAA domain DUF948 PF06103.11 BAM42356.1 - 1.5 9.1 8.2 69 3.8 0.2 4.4 3 1 1 4 4 4 0 Bacterial protein of unknown function (DUF948) Prominin PF05478.11 BAM42356.1 - 3.9 5.3 7.0 9 4.1 7.0 1.5 1 0 0 1 1 1 0 Prominin DUF87 PF01935.17 BAM42356.1 - 8.9 6.3 11.3 3.5 7.7 0.0 4.3 3 2 1 4 4 4 0 Helicase HerA, central domain Peptidase_C48 PF02902.19 BAM42357.1 - 2.6e-31 109.1 0.0 5.9e-31 108.0 0.0 1.6 1 0 0 1 1 1 1 Ulp1 protease family, C-terminal catalytic domain Hydrolase_4 PF12146.8 BAM42359.1 - 9.9e-23 80.6 0.0 1.1e-21 77.3 0.0 2.2 1 1 0 1 1 1 1 Serine aminopeptidase, S33 FAINT PF04385.15 BAM42359.1 - 3e-08 33.6 0.1 0.2 11.7 0.1 4.2 3 0 0 3 3 3 3 Domain of unknown function, DUF529 Abhydrolase_1 PF00561.20 BAM42359.1 - 7.7e-05 22.5 0.3 0.013 15.2 0.0 2.5 2 1 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_2 PF02230.16 BAM42359.1 - 0.0004 20.3 0.0 0.74 9.6 0.0 2.3 2 0 0 2 2 2 2 Phospholipase/Carboxylesterase Abhydrolase_3 PF07859.13 BAM42359.1 - 0.13 12.1 0.0 0.22 11.3 0.0 1.4 1 0 0 1 1 1 0 alpha/beta hydrolase fold Sedlin_N PF04628.13 BAM42361.1 - 1.9e-08 34.5 0.0 2.3e-08 34.2 0.0 1.1 1 0 0 1 1 1 1 Sedlin, N-terminal conserved region HSP20 PF00011.21 BAM42362.1 - 1.1e-11 44.7 0.0 1.9e-11 44.0 0.0 1.4 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 BAM42362.1 - 0.0012 18.4 0.0 0.028 14.0 0.0 2.3 1 1 0 1 1 1 1 HSP20-like domain found in ArsA CLP_protease PF00574.23 BAM42363.1 - 9e-64 214.7 0.0 2.1e-63 213.5 0.0 1.5 1 1 0 1 1 1 1 Clp protease HTH_DeoR PF08220.12 BAM42364.1 - 0.012 15.3 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain ISPD_C PF18706.1 BAM42364.1 - 0.084 12.5 0.1 0.095 12.3 0.1 1.2 1 1 0 1 1 1 0 D-ribitol-5-phosphate cytidylyltransferase C-terminal domain Laminin_G_3 PF13385.6 BAM42365.1 - 3.4e-08 33.8 0.0 1e-06 28.9 0.0 2.3 1 1 0 1 1 1 1 Concanavalin A-like lectin/glucanases superfamily GTP_EFTU PF00009.27 BAM42366.1 - 1.5e-34 119.3 0.0 3.3e-34 118.1 0.0 1.7 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_C PF00679.24 BAM42366.1 - 5.6e-21 74.4 0.0 2.8e-20 72.1 0.0 2.3 2 0 0 2 2 2 1 Elongation factor G C-terminus EFG_IV PF03764.18 BAM42366.1 - 1e-17 64.0 0.0 2.1e-17 63.0 0.0 1.5 1 0 0 1 1 1 1 Elongation factor G, domain IV GTP_EFTU_D2 PF03144.25 BAM42366.1 - 7.1e-10 39.1 0.0 1.6e-09 38.0 0.0 1.6 1 0 0 1 1 1 1 Elongation factor Tu domain 2 EFTUD2 PF16004.5 BAM42366.1 - 1.5e-05 25.5 22.2 0.0051 17.4 4.6 3.5 2 1 1 3 3 3 2 116 kDa U5 small nuclear ribonucleoprotein component N-terminus EFG_II PF14492.6 BAM42366.1 - 0.00014 21.9 0.0 0.00034 20.6 0.0 1.7 1 0 0 1 1 1 1 Elongation Factor G, domain II MMR_HSR1 PF01926.23 BAM42366.1 - 0.0087 16.1 0.1 0.038 14.1 0.0 2.2 2 1 0 2 2 2 1 50S ribosome-binding GTPase Roc PF08477.13 BAM42366.1 - 0.12 12.6 0.0 11 6.3 0.0 2.4 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase FliG_N PF14842.6 BAM42366.1 - 0.19 12.3 0.1 0.42 11.2 0.1 1.5 1 0 0 1 1 1 0 FliG N-terminal domain MKT1_C PF12246.8 BAM42367.1 - 1.5e-34 119.3 0.0 2.3e-34 118.7 0.0 1.3 1 0 0 1 1 1 1 Temperature dependent protein affecting M2 dsRNA replication MKT1_N PF12247.8 BAM42367.1 - 3.4e-20 72.2 0.0 7.3e-20 71.1 0.0 1.6 1 0 0 1 1 1 1 Temperature dependent protein affecting M2 dsRNA replication XPG_I PF00867.18 BAM42367.1 - 1.5e-07 31.7 0.0 3e-07 30.7 0.0 1.6 1 0 0 1 1 1 1 XPG I-region XPG_N PF00752.17 BAM42367.1 - 0.006 17.0 0.0 0.013 16.0 0.0 1.5 1 0 0 1 1 1 1 XPG N-terminal domain IMCp PF12314.8 BAM42369.1 - 3.9e-28 97.6 48.6 1.5e-26 92.5 38.6 2.2 1 1 1 2 2 2 2 Inner membrane complex protein Ribosomal_S10 PF00338.22 BAM42370.1 - 9.6e-27 93.1 0.0 1.2e-26 92.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e PriA_C PF18074.1 BAM42370.1 - 0.029 15.2 0.1 0.051 14.4 0.1 1.4 1 0 0 1 1 1 0 Primosomal protein N C-terminal domain Acetyltransf_1 PF00583.25 BAM42371.1 - 2.6e-07 30.9 0.1 3.1e-07 30.6 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family FR47 PF08445.10 BAM42371.1 - 1.7e-05 24.7 0.0 2.3e-05 24.3 0.0 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_7 PF13508.7 BAM42371.1 - 0.00016 22.1 0.1 0.00022 21.6 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 BAM42371.1 - 0.02 14.8 0.1 0.024 14.6 0.1 1.2 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain MMR_HSR1 PF01926.23 BAM42373.1 - 3.7e-18 65.7 0.0 8.1e-18 64.6 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase AIG1 PF04548.16 BAM42373.1 - 1.5e-06 27.7 0.2 8.3e-05 22.0 0.1 2.3 2 0 0 2 2 2 1 AIG1 family FeoB_N PF02421.18 BAM42373.1 - 3.4e-06 26.7 0.0 6.8e-06 25.7 0.0 1.5 1 0 0 1 1 1 1 Ferrous iron transport protein B Dynamin_N PF00350.23 BAM42373.1 - 1.3e-05 25.4 1.6 0.00034 20.7 0.1 2.7 1 1 1 2 2 2 1 Dynamin family RsgA_GTPase PF03193.16 BAM42373.1 - 0.0011 18.9 0.1 0.0048 16.8 0.1 2.1 2 0 0 2 2 2 1 RsgA GTPase Roc PF08477.13 BAM42373.1 - 0.02 15.1 0.0 0.055 13.7 0.0 1.8 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase SRPRB PF09439.10 BAM42373.1 - 0.038 13.4 0.0 0.089 12.2 0.0 1.5 1 0 0 1 1 1 0 Signal recognition particle receptor beta subunit AAA_16 PF13191.6 BAM42373.1 - 0.048 14.0 0.0 0.089 13.2 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain TniB PF05621.11 BAM42373.1 - 0.12 11.8 0.2 2.8 7.3 0.1 2.2 1 1 1 2 2 2 0 Bacterial TniB protein AAA_25 PF13481.6 BAM42373.1 - 0.14 11.7 0.0 0.24 10.9 0.0 1.3 1 0 0 1 1 1 0 AAA domain RunxI PF08504.11 BAM42373.1 - 0.85 10.4 11.3 0.18 12.5 7.1 2.1 2 0 0 2 2 2 0 Runx inhibition domain RBFA PF02033.18 BAM42374.1 - 7.8e-10 39.2 0.0 1.7e-09 38.1 0.0 1.5 1 0 0 1 1 1 1 Ribosome-binding factor A INCENP_ARK-bind PF03941.15 BAM42376.1 - 4.7e-05 23.2 0.0 4.7e-05 23.2 0.0 1.8 2 0 0 2 2 2 1 Inner centromere protein, ARK binding region Got1 PF04178.12 BAM42378.1 - 1.1e-06 29.0 16.0 1.5e-06 28.6 16.0 1.1 1 0 0 1 1 1 1 Got1/Sft2-like family DUF3098 PF11297.8 BAM42378.1 - 3.1 7.5 10.1 3.4 7.3 5.5 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF3098) DUF2492 PF10678.9 BAM42379.1 - 0.11 12.8 0.0 0.52 10.6 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2492) AAA PF00004.29 BAM42382.1 - 5.8e-42 143.3 0.1 1.3e-41 142.1 0.0 1.7 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 BAM42382.1 - 2e-11 43.5 0.1 4.5e-11 42.4 0.1 1.6 1 0 0 1 1 1 1 AAA+ lid domain AAA_16 PF13191.6 BAM42382.1 - 2e-07 31.6 0.0 3.1e-05 24.4 0.0 2.5 1 1 1 2 2 2 1 AAA ATPase domain Prot_ATP_ID_OB PF16450.5 BAM42382.1 - 5.8e-07 29.4 0.1 1.2e-06 28.3 0.1 1.6 1 0 0 1 1 1 1 Proteasomal ATPase OB C-terminal domain AAA_5 PF07728.14 BAM42382.1 - 7.6e-06 26.0 0.0 0.00014 21.9 0.0 2.6 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 BAM42382.1 - 1.1e-05 25.2 0.0 2.7e-05 24.0 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 BAM42382.1 - 2.2e-05 24.7 0.1 9.9e-05 22.5 0.0 2.0 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 BAM42382.1 - 0.00047 20.4 0.0 0.012 15.9 0.0 2.6 1 1 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 BAM42382.1 - 0.00063 20.1 0.0 0.0017 18.7 0.0 1.8 1 0 0 1 1 1 1 RNA helicase DUF815 PF05673.13 BAM42382.1 - 0.00079 18.7 0.0 0.0017 17.6 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_18 PF13238.6 BAM42382.1 - 0.001 19.6 0.1 0.0093 16.5 0.0 2.4 2 0 0 2 2 2 1 AAA domain TIP49 PF06068.13 BAM42382.1 - 0.0014 17.9 0.0 0.0033 16.7 0.0 1.6 1 0 0 1 1 1 1 TIP49 P-loop domain AAA_7 PF12775.7 BAM42382.1 - 0.002 17.7 0.0 0.005 16.4 0.0 1.7 1 0 0 1 1 1 1 P-loop containing dynein motor region IstB_IS21 PF01695.17 BAM42382.1 - 0.0026 17.5 0.0 0.0058 16.4 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_24 PF13479.6 BAM42382.1 - 0.0046 16.7 0.0 0.011 15.5 0.0 1.8 1 0 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 BAM42382.1 - 0.0065 15.9 0.0 0.013 14.9 0.0 1.4 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 BAM42382.1 - 0.0066 16.7 0.1 0.019 15.2 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA_3 PF07726.11 BAM42382.1 - 0.011 15.6 0.0 0.026 14.4 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 BAM42382.1 - 0.014 15.1 0.0 0.043 13.5 0.0 1.9 2 1 0 2 2 1 0 Sigma-54 interaction domain NACHT PF05729.12 BAM42382.1 - 0.018 15.0 0.5 0.14 12.0 0.0 2.5 3 0 0 3 3 3 0 NACHT domain BLOC1_2 PF10046.9 BAM42382.1 - 0.021 15.1 1.4 0.058 13.7 1.0 1.9 2 0 0 2 2 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 AAA_33 PF13671.6 BAM42382.1 - 0.025 14.7 0.0 0.057 13.6 0.0 1.7 1 0 0 1 1 1 0 AAA domain TsaE PF02367.17 BAM42382.1 - 0.034 14.2 0.0 0.062 13.3 0.0 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_14 PF13173.6 BAM42382.1 - 0.036 14.1 0.0 0.076 13.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain DUF3287 PF11690.8 BAM42382.1 - 0.053 13.3 0.0 0.27 11.0 0.1 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF3287) ATPase PF06745.13 BAM42382.1 - 0.068 12.5 0.1 0.2 11.0 0.0 1.8 2 0 0 2 2 2 0 KaiC ABC_tran PF00005.27 BAM42382.1 - 0.079 13.5 1.5 0.98 9.9 0.0 2.5 2 0 0 2 2 2 0 ABC transporter Lectin_N PF03954.14 BAM42382.1 - 0.082 12.7 3.5 0.29 10.9 0.5 2.3 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain AAA_25 PF13481.6 BAM42382.1 - 0.095 12.3 0.0 0.25 10.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain XhlA PF10779.9 BAM42382.1 - 0.099 12.9 2.1 0.24 11.6 2.1 1.6 1 0 0 1 1 1 0 Haemolysin XhlA Tektin PF03148.14 BAM42382.1 - 0.13 11.0 4.7 0.094 11.5 3.3 1.5 1 1 0 1 1 1 0 Tektin family Macoilin PF09726.9 BAM42382.1 - 0.32 9.5 14.9 0.41 9.1 14.9 1.1 1 0 0 1 1 1 0 Macoilin family Tmemb_cc2 PF10267.9 BAM42382.1 - 2.9 6.9 10.4 4.6 6.3 10.4 1.3 1 0 0 1 1 1 0 Predicted transmembrane and coiled-coil 2 protein Ndc1_Nup PF09531.10 BAM42382.1 - 5.1 5.7 8.8 7 5.2 8.8 1.1 1 0 0 1 1 1 0 Nucleoporin protein Ndc1-Nup RAP1 PF07218.11 BAM42382.1 - 7 4.8 11.0 9.8 4.3 11.0 1.1 1 0 0 1 1 1 0 Rhoptry-associated protein 1 (RAP-1) WD40 PF00400.32 BAM42383.1 - 1.8e-37 126.6 8.9 1.9e-06 28.5 0.0 7.1 7 0 0 7 7 7 6 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM42383.1 - 3.7e-06 27.2 0.4 0.11 12.8 0.0 4.8 3 2 3 6 6 6 1 Anaphase-promoting complex subunit 4 WD40 domain WD40_like PF17005.5 BAM42383.1 - 9.7e-06 25.1 0.1 0.00014 21.3 0.0 2.4 2 1 1 3 3 3 2 WD40-like domain Nucleoporin_N PF08801.11 BAM42383.1 - 3.5e-05 22.7 0.2 0.052 12.3 0.0 2.9 1 1 2 3 3 3 2 Nup133 N terminal like PQQ_3 PF13570.6 BAM42383.1 - 0.024 15.1 2.4 0.58 10.7 0.0 3.5 3 0 0 3 3 3 0 PQQ-like domain FAINT PF04385.15 BAM42385.1 - 9.3e-15 54.5 26.1 0.0084 16.2 0.2 7.3 7 0 0 7 7 7 6 Domain of unknown function, DUF529 XPG_I PF00867.18 BAM42387.1 - 3.2e-19 69.1 0.2 3.2e-19 69.1 0.2 2.8 2 1 0 2 2 2 1 XPG I-region XPG_N PF00752.17 BAM42387.1 - 1.1e-15 57.9 0.0 3.4e-15 56.4 0.0 1.8 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 BAM42387.1 - 0.0012 19.4 0.5 0.019 15.5 0.0 2.9 2 1 0 3 3 3 1 5'-3' exonuclease, C-terminal SAM fold XPG_I_2 PF12813.7 BAM42387.1 - 0.0014 18.1 0.0 0.0028 17.2 0.0 1.4 1 0 0 1 1 1 1 XPG domain containing zf-C2H2 PF00096.26 BAM42387.1 - 0.005 17.2 0.2 0.038 14.5 0.2 2.6 2 0 0 2 2 2 1 Zinc finger, C2H2 type Peptidase_M50 PF02163.22 BAM42387.1 - 0.079 12.2 0.0 0.14 11.4 0.0 1.4 1 0 0 1 1 1 0 Peptidase family M50 COX2-transmemb PF09125.10 BAM42391.1 - 0.17 11.7 0.9 0.45 10.3 0.9 1.8 1 1 0 1 1 1 0 Cytochrome C oxidase subunit II, transmembrane DUF5480 PF17576.2 BAM42393.1 - 0.084 12.9 1.5 0.14 12.2 1.5 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5480) Snf7 PF03357.21 BAM42394.1 - 7.4e-16 58.2 3.1 8.9e-16 58.0 3.1 1.1 1 0 0 1 1 1 1 Snf7 Ins_allergen_rp PF06757.13 BAM42394.1 - 0.0075 16.3 0.3 0.01 15.8 0.3 1.3 1 0 0 1 1 1 1 Insect allergen related repeat, nitrile-specifier detoxification Rsa3 PF14615.6 BAM42394.1 - 0.025 14.1 3.1 0.51 9.9 0.1 3.2 3 1 0 3 3 3 0 Ribosome-assembly protein 3 Phytochelatin PF05023.14 BAM42394.1 - 0.087 12.0 0.2 0.12 11.6 0.2 1.3 1 0 0 1 1 1 0 Phytochelatin synthase SUI1 PF01253.22 BAM42395.1 - 1.1e-23 83.6 0.6 1.3e-23 83.3 0.6 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 Img2 PF05046.14 BAM42395.1 - 0.052 13.8 0.6 0.079 13.3 0.6 1.4 1 1 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) ssDNA_TraI_N PF18272.1 BAM42395.1 - 0.097 12.7 0.1 0.93 9.5 0.0 2.0 2 0 0 2 2 2 0 single-stranded DNA binding TraI N-terminal subdomain RNase_PH_C PF03725.15 BAM42395.1 - 0.16 12.0 0.1 0.31 11.1 0.0 1.5 2 0 0 2 2 2 0 3' exoribonuclease family, domain 2 GIDA PF01134.22 BAM42396.1 - 3.8e-133 444.4 0.0 8.5e-133 443.2 0.0 1.6 1 1 0 1 1 1 1 Glucose inhibited division protein A GIDA_assoc PF13932.6 BAM42396.1 - 2.3e-45 155.4 8.8 6.5e-32 111.4 2.6 2.5 1 1 1 2 2 2 2 GidA associated domain FAD_oxidored PF12831.7 BAM42396.1 - 5e-07 29.4 1.5 1.1e-06 28.3 1.5 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 BAM42396.1 - 2.8e-05 23.5 6.7 0.00055 19.3 6.7 2.3 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 BAM42396.1 - 6.5e-05 22.2 2.7 0.00083 18.5 1.5 2.5 3 0 0 3 3 3 1 FAD binding domain AlaDh_PNT_C PF01262.21 BAM42396.1 - 0.0011 18.3 0.2 0.0024 17.2 0.2 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain HI0933_like PF03486.14 BAM42396.1 - 0.0063 15.3 2.0 0.061 12.0 0.6 2.7 3 0 0 3 3 3 1 HI0933-like protein Pyr_redox PF00070.27 BAM42396.1 - 0.024 15.2 0.4 0.024 15.2 0.4 3.2 4 0 0 4 4 3 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 BAM42396.1 - 0.039 13.2 0.0 0.32 10.2 0.0 2.4 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 BAM42396.1 - 0.14 11.4 0.4 0.4 9.9 0.2 1.8 2 0 0 2 2 2 0 Thi4 family NAD_binding_7 PF13241.6 BAM42396.1 - 0.16 12.4 0.0 0.53 10.8 0.0 1.9 1 0 0 1 1 1 0 Putative NAD(P)-binding KELK PF15796.5 BAM42396.1 - 5.8 7.4 7.3 12 6.5 0.2 3.0 3 0 0 3 3 3 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase Pkinase PF00069.25 BAM42397.1 - 8.6e-45 153.1 0.1 6.6e-19 68.3 0.0 3.7 4 0 0 4 4 4 3 Protein kinase domain Pkinase_Tyr PF07714.17 BAM42397.1 - 1.8e-25 89.7 0.0 5.4e-21 75.0 0.0 2.4 2 0 0 2 2 2 2 Protein tyrosine kinase C2 PF00168.30 BAM42397.1 - 9.6e-07 29.0 0.0 0.0031 17.8 0.0 3.1 3 0 0 3 3 3 2 C2 domain SRP-alpha_N PF04086.13 BAM42397.1 - 0.0047 16.9 20.4 0.0047 16.9 20.4 4.0 2 1 0 3 3 3 1 Signal recognition particle, alpha subunit, N-terminal APH PF01636.23 BAM42397.1 - 0.025 14.5 0.0 0.16 11.9 0.0 2.0 1 1 0 1 1 1 0 Phosphotransferase enzyme family Hydrolase_4 PF12146.8 BAM42398.1 - 8.8e-07 28.4 0.0 0.019 14.3 0.0 2.2 2 0 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_1 PF00561.20 BAM42398.1 - 1e-06 28.6 0.0 0.0033 17.1 0.0 2.4 2 0 0 2 2 2 2 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 BAM42398.1 - 0.00019 22.1 0.0 0.00032 21.4 0.0 1.5 1 1 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.7 BAM42398.1 - 0.13 12.0 0.0 0.25 11.1 0.0 1.5 1 0 0 1 1 1 0 Alpha/beta hydrolase family PUF PF00806.19 BAM42399.1 - 3.1e-09 36.0 6.8 0.093 12.5 0.0 6.0 7 0 0 7 7 7 3 Pumilio-family RNA binding repeat Abi_2 PF07751.11 BAM42399.1 - 0.0034 17.7 0.9 0.0034 17.7 0.9 2.5 3 0 0 3 3 3 1 Abi-like protein LCM PF04072.14 BAM42400.1 - 7.2e-13 48.9 0.0 1.1e-12 48.3 0.0 1.3 1 0 0 1 1 1 1 Leucine carboxyl methyltransferase MIT_LIKE_ACTX PF17556.2 BAM42400.1 - 0.17 12.5 0.0 0.39 11.3 0.0 1.5 1 0 0 1 1 1 0 MIT-like atracotoxin family LCM PF04072.14 BAM42401.1 - 2e-05 24.6 0.0 7.3e-05 22.8 0.0 1.8 1 1 0 1 1 1 1 Leucine carboxyl methyltransferase LCM PF04072.14 BAM42402.1 - 7.1e-32 110.9 0.0 1.1e-15 58.1 0.0 2.3 2 0 0 2 2 2 2 Leucine carboxyl methyltransferase LCM PF04072.14 BAM42403.1 - 5.7e-16 59.0 0.0 1.1e-15 58.1 0.0 1.4 1 1 0 1 1 1 1 Leucine carboxyl methyltransferase LCM PF04072.14 BAM42404.1 - 1.7e-31 109.7 0.0 3.2e-15 56.5 0.0 2.5 2 0 0 2 2 2 2 Leucine carboxyl methyltransferase Rtt106 PF08512.12 BAM42404.1 - 9.6e-16 58.0 0.8 1e-14 54.7 0.8 2.6 1 1 0 1 1 1 1 Histone chaperone Rttp106-like POB3_N PF17292.2 BAM42406.1 - 2e-24 85.8 1.5 3.7e-22 78.6 1.2 2.7 2 1 0 2 2 2 1 POB3-like N-terminal PH domain SSrecog PF03531.14 BAM42406.1 - 2.8e-17 62.4 0.0 6.8e-17 61.1 0.0 1.7 1 0 0 1 1 1 1 Structure-specific recognition protein (SSRP1) DUF4667 PF15700.5 BAM42406.1 - 0.0041 17.2 0.2 0.0057 16.8 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4667) AMA-1 PF02430.15 BAM42406.1 - 0.072 12.0 0.1 0.43 9.5 0.1 1.9 1 1 1 2 2 2 0 Apical membrane antigen 1 Ribosomal_L1 PF00687.21 BAM42407.1 - 4e-40 137.7 0.2 4.9e-40 137.5 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Tnp_22_trimer PF17489.2 BAM42407.1 - 0.0032 17.4 1.3 0.012 15.5 0.2 2.2 2 0 0 2 2 2 1 L1 transposable element trimerization domain Pes-10 PF07149.11 BAM42408.1 - 0.012 14.7 0.7 0.012 14.7 0.7 1.2 1 0 0 1 1 1 0 Pes-10 BUD22 PF09073.10 BAM42408.1 - 0.017 14.5 3.4 0.018 14.4 3.4 1.1 1 0 0 1 1 1 0 BUD22 PBP1_TM PF14812.6 BAM42408.1 - 0.021 15.2 9.1 0.045 14.1 9.1 1.5 1 0 0 1 1 1 0 Transmembrane domain of transglycosylase PBP1 at N-terminal RRN3 PF05327.11 BAM42408.1 - 0.054 12.0 3.4 0.064 11.8 3.4 1.0 1 0 0 1 1 1 0 RNA polymerase I specific transcription initiation factor RRN3 Connexin PF00029.19 BAM42408.1 - 0.11 12.2 0.0 0.13 12.0 0.0 1.1 1 0 0 1 1 1 0 Connexin CDC45 PF02724.14 BAM42408.1 - 0.11 10.7 2.3 0.13 10.5 2.3 1.1 1 0 0 1 1 1 0 CDC45-like protein DNA_pol_phi PF04931.13 BAM42408.1 - 0.32 9.0 5.9 0.38 8.8 5.9 1.1 1 0 0 1 1 1 0 DNA polymerase phi C1_2 PF03107.16 BAM42409.1 - 0.31 11.4 7.3 0.86 10.0 0.9 2.9 2 0 0 2 2 2 0 C1 domain Pkinase PF00069.25 BAM42410.1 - 2.7e-62 210.6 2.7 1.8e-61 207.9 2.7 2.1 1 1 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 BAM42410.1 - 9.1e-32 110.3 0.1 1.2e-30 106.7 0.1 2.2 1 1 0 1 1 1 1 Protein tyrosine kinase Kinase-like PF14531.6 BAM42410.1 - 7.7e-10 38.5 0.0 2.1e-06 27.3 0.0 2.5 3 0 0 3 3 3 2 Kinase-like Kdo PF06293.14 BAM42410.1 - 0.00083 18.8 0.0 0.0017 17.8 0.0 1.4 1 0 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 BAM42410.1 - 0.029 14.0 0.6 0.47 10.0 0.0 2.3 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 DAOA PF15199.6 BAM42410.1 - 0.1 13.0 0.0 1.1 9.7 0.0 2.4 2 0 0 2 2 2 0 D-amino acid oxidase activator zf-RING_2 PF13639.6 BAM42411.1 - 1.6e-09 37.9 10.9 2.9e-09 37.1 10.9 1.4 1 0 0 1 1 1 1 Ring finger domain zf-C3HC4_3 PF13920.6 BAM42411.1 - 1.2e-06 28.2 6.5 2.1e-06 27.5 6.5 1.4 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-RING_11 PF17123.5 BAM42411.1 - 4.6e-06 26.3 5.2 1.2e-05 24.9 5.2 1.8 1 0 0 1 1 1 1 RING-like zinc finger zf-RING_5 PF14634.6 BAM42411.1 - 1.6e-05 24.8 7.1 2.7e-05 24.0 7.1 1.4 1 0 0 1 1 1 1 zinc-RING finger domain zf-C3HC4 PF00097.25 BAM42411.1 - 0.00025 20.9 9.7 0.00046 20.0 9.7 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) zf-rbx1 PF12678.7 BAM42411.1 - 0.0004 20.6 10.1 0.00053 20.2 8.0 2.2 2 0 0 2 2 2 1 RING-H2 zinc finger domain zf-C3HC4_2 PF13923.6 BAM42411.1 - 0.002 17.9 9.9 0.0039 17.0 9.9 1.5 1 0 0 1 1 1 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 BAM42411.1 - 0.0022 17.8 7.9 0.004 17.0 7.9 1.4 1 0 0 1 1 1 1 Prokaryotic RING finger family 4 Zn_ribbon_17 PF17120.5 BAM42411.1 - 0.069 12.8 7.7 0.16 11.6 7.7 1.6 1 0 0 1 1 1 0 Zinc-ribbon, C4HC2 type zf-ANAPC11 PF12861.7 BAM42411.1 - 0.16 12.0 3.0 0.48 10.5 3.0 1.8 1 0 0 1 1 1 0 Anaphase-promoting complex subunit 11 RING-H2 finger zf-RING_UBOX PF13445.6 BAM42411.1 - 0.17 11.9 5.9 0.37 10.8 5.9 1.6 1 0 0 1 1 1 0 RING-type zinc-finger zf-RING_4 PF14570.6 BAM42411.1 - 1.8 8.4 8.7 3.9 7.4 8.7 1.6 1 0 0 1 1 1 0 RING/Ubox like zinc-binding domain WD40 PF00400.32 BAM42412.1 - 5e-07 30.3 5.1 0.032 15.1 0.0 4.4 5 0 0 5 5 5 2 WD domain, G-beta repeat WD40_like PF17005.5 BAM42412.1 - 0.24 10.7 6.5 0.16 11.2 3.1 2.2 2 1 0 2 2 2 0 WD40-like domain WD40 PF00400.32 BAM42413.1 - 4.1e-09 36.9 9.7 0.00027 21.7 0.1 4.8 4 1 0 4 4 4 3 WD domain, G-beta repeat WD40_like PF17005.5 BAM42413.1 - 0.00015 21.2 5.5 0.23 10.7 0.2 3.2 2 1 0 3 3 3 2 WD40-like domain ANAPC4_WD40 PF12894.7 BAM42413.1 - 0.01 16.1 0.1 0.6 10.4 0.0 3.1 2 2 2 4 4 4 0 Anaphase-promoting complex subunit 4 WD40 domain zf-A20 PF01754.16 BAM42416.1 - 7.9e-11 41.7 12.2 7.9e-11 41.7 12.2 2.2 3 0 0 3 3 3 1 A20-like zinc finger zf-AN1 PF01428.16 BAM42416.1 - 4.9e-08 33.0 12.1 4.9e-08 33.0 12.1 2.4 2 1 0 2 2 2 1 AN1-like Zinc finger CTP_transf_like PF01467.26 BAM42418.1 - 1.9e-07 31.4 0.0 4e-07 30.3 0.0 1.6 1 0 0 1 1 1 1 Cytidylyltransferase-like Bac_DNA_binding PF00216.21 BAM42420.1 - 1.4e-20 73.2 0.8 2.2e-20 72.7 0.8 1.3 1 0 0 1 1 1 1 Bacterial DNA-binding protein HU-HIG PF18291.1 BAM42420.1 - 1.5e-07 31.6 0.2 2e-07 31.1 0.2 1.2 1 0 0 1 1 1 1 HU domain fused to wHTH, Ig, or Glycine-rich motif HU-CCDC81_bac_2 PF18175.1 BAM42420.1 - 0.00011 22.0 0.1 0.00025 20.8 0.1 1.6 1 0 0 1 1 1 1 CCDC81-like prokaryotic HU domain 2 HU-CCDC81_euk_1 PF14908.6 BAM42420.1 - 0.023 14.9 0.4 0.041 14.0 0.2 1.6 1 1 0 1 1 1 0 CCDC81 eukaryotic HU domain 1 HU-CCDC81_euk_2 PF18289.1 BAM42420.1 - 0.03 14.5 0.1 0.085 13.0 0.1 1.7 1 0 0 1 1 1 0 CCDC81 eukaryotic HU domain 2 DUF2267 PF10025.9 BAM42420.1 - 0.074 13.3 0.1 0.12 12.7 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) DUF4713 PF15831.5 BAM42420.1 - 0.44 11.0 1.5 1 9.9 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4713) Prefoldin_2 PF01920.20 BAM42421.1 - 4.8e-13 49.0 9.3 5.5e-13 48.8 9.3 1.0 1 0 0 1 1 1 1 Prefoldin subunit DUF4164 PF13747.6 BAM42421.1 - 0.0036 17.5 5.6 0.77 10.1 2.3 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF4164) DUF5093 PF17011.5 BAM42421.1 - 0.016 15.5 2.0 0.048 14.0 2.0 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF5093) DUF4140 PF13600.6 BAM42421.1 - 0.047 14.1 2.4 0.67 10.4 0.3 2.1 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) FlxA PF14282.6 BAM42421.1 - 0.07 13.1 1.6 0.07 13.1 1.6 1.7 2 0 0 2 2 2 0 FlxA-like protein FapA PF03961.13 BAM42421.1 - 1.8 7.1 4.7 2.1 6.9 4.7 1.1 1 0 0 1 1 1 0 Flagellar Assembly Protein A bZIP_1 PF00170.21 BAM42421.1 - 2.1 8.5 12.3 0.74 10.0 5.1 2.1 2 0 0 2 2 2 0 bZIP transcription factor Spc24 PF08286.11 BAM42421.1 - 6.5 7.0 10.2 1.5 9.1 3.0 2.1 1 1 0 2 2 2 0 Spc24 subunit of Ndc80 SPC22 PF04573.12 BAM42422.1 - 2.8e-38 131.1 0.1 3.2e-38 130.9 0.1 1.0 1 0 0 1 1 1 1 Signal peptidase subunit Ph1570 PF09638.10 BAM42423.1 - 0.46 10.3 5.7 1.1 9.2 0.1 3.2 3 0 0 3 3 3 0 Ph1570 protein PH PF00169.29 BAM42424.1 - 0.00049 20.6 0.1 0.0012 19.3 0.1 1.7 1 0 0 1 1 1 1 PH domain Sorting_nexin PF03700.13 BAM42424.1 - 0.012 16.1 0.2 0.019 15.5 0.2 1.3 1 0 0 1 1 1 0 Sorting nexin, N-terminal domain Adaptin_N PF01602.20 BAM42425.1 - 1.2e-39 136.3 22.6 1.7e-39 135.8 22.6 1.2 1 0 0 1 1 1 1 Adaptin N terminal region Baculo_p74 PF04583.12 BAM42425.1 - 0.002 17.7 0.3 0.002 17.7 0.3 2.4 3 0 0 3 3 3 1 Baculoviridae p74 conserved region Cnd1 PF12717.7 BAM42425.1 - 0.62 10.1 9.7 0.19 11.8 0.4 3.5 3 1 1 4 4 4 0 non-SMC mitotic condensation complex subunit 1 EntA_Immun PF08951.10 BAM42425.1 - 3.1 8.2 10.8 0.061 13.7 1.3 3.2 3 0 0 3 3 3 0 Enterocin A Immunity RabGAP-TBC PF00566.18 BAM42426.1 - 4e-19 69.1 0.7 7.5e-19 68.2 0.7 1.5 1 1 0 1 1 1 1 Rab-GTPase-TBC domain Ribosomal_L32e PF01655.18 BAM42427.1 - 5.5e-42 142.6 2.3 6.5e-42 142.3 2.3 1.1 1 0 0 1 1 1 1 Ribosomal protein L32 HTH_DeoR PF08220.12 BAM42428.1 - 0.023 14.4 0.1 0.16 11.8 0.0 2.3 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain FAINT PF04385.15 BAM42429.1 - 4.7e-14 52.2 17.2 0.00019 21.4 0.4 4.0 3 0 0 3 3 3 3 Domain of unknown function, DUF529 CD45 PF12567.8 BAM42430.1 - 0.0056 16.6 9.6 0.35 10.9 1.2 2.7 2 0 0 2 2 2 2 Leukocyte receptor CD45 DUF2661 PF10860.8 BAM42430.1 - 0.55 10.4 6.3 0.14 12.2 2.7 1.9 2 1 0 2 2 2 0 Protein of unknown function (DUF2661) FAINT PF04385.15 BAM42432.1 - 3.9e-29 100.5 84.4 5.7e-06 26.3 0.4 12.6 12 0 0 12 12 12 12 Domain of unknown function, DUF529 DUF4430 PF14478.6 BAM42432.1 - 3e-11 43.8 0.6 6.8 7.4 0.0 5.8 5 0 0 5 5 5 5 Domain of unknown function (DUF4430) Hva1_TUDOR PF11160.8 BAM42432.1 - 5e-06 26.6 0.4 66 3.8 0.0 5.7 5 0 0 5 5 5 0 Hypervirulence associated proteins TUDOR domain Peptidase_M43 PF05572.13 BAM42432.1 - 0.045 13.7 4.8 0.64 9.9 0.3 2.8 2 0 0 2 2 2 0 Pregnancy-associated plasma protein-A Tubulin PF00091.25 BAM42435.1 - 7.4e-67 225.4 0.0 1.1e-66 224.8 0.0 1.3 1 0 0 1 1 1 1 Tubulin/FtsZ family, GTPase domain Tubulin_C PF03953.17 BAM42435.1 - 9.9e-50 167.9 0.1 1.7e-49 167.1 0.1 1.4 1 0 0 1 1 1 1 Tubulin C-terminal domain Tubulin_3 PF14881.6 BAM42435.1 - 0.0045 16.7 0.0 0.01 15.6 0.0 1.6 1 0 0 1 1 1 1 Tubulin domain Claudin_3 PF06653.11 BAM42436.1 - 0.052 13.5 0.1 0.052 13.5 0.1 1.1 1 0 0 1 1 1 0 Tight junction protein, Claudin-like RELT PF12606.8 BAM42437.1 - 0.38 9.8 1.1 0.67 9.0 0.3 1.8 2 0 0 2 2 2 0 Tumour necrosis factor receptor superfamily member 19 TrmB PF01978.19 BAM42438.1 - 0.048 13.6 0.1 0.15 12.0 0.0 1.8 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB Cpn60_TCP1 PF00118.24 BAM42439.1 - 5.5e-161 536.5 6.5 6.4e-161 536.3 6.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family HTH_ParB PF17762.1 BAM42439.1 - 0.057 13.2 0.1 1.4 8.8 0.0 2.6 2 0 0 2 2 2 0 HTH domain found in ParB protein SNF2_N PF00176.23 BAM42440.1 - 1e-33 116.5 2.0 2.7e-22 79.0 0.1 3.3 3 0 0 3 3 3 3 SNF2 family N-terminal domain Helicase_C PF00271.31 BAM42440.1 - 3.3e-14 53.2 6.8 5.4e-09 36.4 0.0 3.9 4 0 0 4 4 4 2 Helicase conserved C-terminal domain Connexin PF00029.19 BAM42440.1 - 0.42 10.3 2.6 2.8 7.6 2.6 2.5 1 0 0 1 1 1 0 Connexin Cons_hypoth95 PF03602.15 BAM42441.1 - 9e-36 123.2 0.0 1.2e-35 122.8 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.14 BAM42441.1 - 6.4e-06 25.8 0.0 1.1e-05 25.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_31 PF13847.6 BAM42441.1 - 1.8e-05 24.6 0.0 2.6e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 BAM42441.1 - 0.00088 19.9 0.0 0.0014 19.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 BAM42441.1 - 0.22 10.9 0.0 0.32 10.3 0.0 1.2 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) FAINT PF04385.15 BAM42442.1 - 3.7e-05 23.7 4.3 4.3e-05 23.5 2.4 2.1 1 1 1 2 2 2 1 Domain of unknown function, DUF529 SOG2 PF10428.9 BAM42442.1 - 0.011 15.0 10.5 0.017 14.4 10.5 1.2 1 0 0 1 1 1 0 RAM signalling pathway protein AMPK1_CBM PF16561.5 BAM42442.1 - 0.012 15.8 0.2 0.028 14.6 0.2 1.6 1 0 0 1 1 1 0 Glycogen recognition site of AMP-activated protein kinase Tox-URI2 PF15653.6 BAM42442.1 - 0.093 13.0 2.0 6.2 7.2 0.1 2.5 2 0 0 2 2 2 0 URI fold toxin 2 FAINT PF04385.15 BAM42443.1 - 5.6e-20 71.2 16.7 6.4e-10 39.0 1.9 4.8 4 1 0 4 4 4 4 Domain of unknown function, DUF529 FAINT PF04385.15 BAM42444.1 - 2e-16 59.8 27.8 3.4e-06 27.0 0.3 5.3 5 0 0 5 5 5 4 Domain of unknown function, DUF529 Glyco_hydro38C2 PF17677.1 BAM42444.1 - 0.053 13.6 0.1 17 5.6 0.0 2.9 3 0 0 3 3 3 0 Glycosyl hydrolases family 38 C-terminal beta sandwich domain Mcp5_PH PF12814.7 BAM42444.1 - 0.11 12.7 0.6 0.49 10.5 0.1 2.1 2 0 0 2 2 2 0 Meiotic cell cortex C-terminal pleckstrin homology FAINT PF04385.15 BAM42445.1 - 5.4e-12 45.6 23.5 0.00016 21.7 3.1 4.8 4 0 0 4 4 4 4 Domain of unknown function, DUF529 FAINT PF04385.15 BAM42447.1 - 8.6e-12 45.0 8.4 4.6e-06 26.6 1.2 2.6 2 0 0 2 2 2 2 Domain of unknown function, DUF529 GDI PF00996.18 BAM42449.1 - 1.1e-18 67.1 0.5 1.6e-09 36.8 0.0 3.3 3 0 0 3 3 3 3 GDP dissociation inhibitor NAD_binding_8 PF13450.6 BAM42449.1 - 0.076 13.3 0.0 0.2 11.9 0.0 1.7 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain dsRBD2 PF17842.1 BAM42449.1 - 2.7 8.2 6.2 4.8 7.4 4.1 2.4 2 0 0 2 2 2 0 Double-stranded RNA binding domain 2 Yae1_N PF09811.9 BAM42449.1 - 6.5 6.5 17.6 1.2 8.9 1.4 3.4 1 1 2 3 3 3 0 Essential protein Yae1, N terminal WD40 PF00400.32 BAM42450.1 - 4.9e-11 43.0 6.2 0.0038 18.0 0.0 5.6 5 0 0 5 5 5 3 WD domain, G-beta repeat ANAPC4_WD40 PF12894.7 BAM42450.1 - 5.2e-07 29.9 0.0 0.78 10.1 0.0 4.1 4 0 0 4 4 4 3 Anaphase-promoting complex subunit 4 WD40 domain TFIID_NTD2 PF04494.15 BAM42450.1 - 8.4e-07 29.3 8.5 1.5e-06 28.5 8.5 1.4 1 0 0 1 1 1 1 WD40 associated region in TFIID subunit, NTD2 domain Cytochrom_D1 PF02239.16 BAM42450.1 - 0.035 12.6 0.0 6.6 5.2 0.0 2.3 2 0 0 2 2 2 0 Cytochrome D1 heme domain eIF_4G1 PF12152.8 BAM42450.1 - 0.17 12.1 0.6 24 5.2 0.0 2.7 2 0 0 2 2 2 0 Eukaryotic translation initiation factor 4G1 RrnaAD PF00398.20 BAM42453.1 - 1.9e-37 128.8 0.4 2.4e-33 115.3 0.0 2.1 2 0 0 2 2 2 2 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 BAM42453.1 - 0.00099 19.8 0.0 0.0021 18.7 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 BAM42453.1 - 0.0014 18.5 0.0 0.0026 17.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 BAM42453.1 - 0.0022 17.6 0.0 0.0047 16.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase small domain MetW PF07021.12 BAM42453.1 - 0.0026 17.4 0.0 0.0076 15.9 0.0 1.7 2 0 0 2 2 2 1 Methionine biosynthesis protein MetW Methyltransf_32 PF13679.6 BAM42453.1 - 0.0036 17.3 0.3 0.0082 16.1 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain Scm3 PF10384.9 BAM42453.1 - 0.0046 16.7 0.8 0.7 9.7 0.0 2.9 2 0 0 2 2 2 1 Centromere protein Scm3 Methyltransf_23 PF13489.6 BAM42453.1 - 0.014 15.3 0.0 0.021 14.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_4 PF02390.17 BAM42453.1 - 0.047 13.2 0.0 0.1 12.0 0.0 1.6 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_12 PF08242.12 BAM42453.1 - 0.06 14.1 0.0 0.14 12.9 0.0 1.6 1 0 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 BAM42453.1 - 0.093 12.5 0.0 0.17 11.6 0.0 1.4 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PHD PF00628.29 BAM42454.1 - 1e-11 44.5 6.4 1e-11 44.5 6.4 3.5 3 0 0 3 3 3 1 PHD-finger zf-RING_2 PF13639.6 BAM42454.1 - 5.2e-08 33.1 8.1 5.2e-08 33.1 8.1 3.4 3 0 0 3 3 3 1 Ring finger domain zf-rbx1 PF12678.7 BAM42454.1 - 1.5e-06 28.3 5.0 1.5e-06 28.3 5.0 3.7 3 0 0 3 3 3 1 RING-H2 zinc finger domain zf-C3HC4 PF00097.25 BAM42454.1 - 8.6e-06 25.5 8.6 8.6e-06 25.5 8.6 3.5 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) Prok-RING_4 PF14447.6 BAM42454.1 - 1.3e-05 24.9 7.5 1.3e-05 24.9 7.5 3.0 3 0 0 3 3 3 1 Prokaryotic RING finger family 4 zf-C3HC4_2 PF13923.6 BAM42454.1 - 1.4e-05 24.8 7.3 1.4e-05 24.8 7.3 3.4 3 0 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-C3HC4_3 PF13920.6 BAM42454.1 - 2e-05 24.3 6.1 2e-05 24.3 6.1 3.5 3 1 0 3 3 3 1 Zinc finger, C3HC4 type (RING finger) zf-RING_UBOX PF13445.6 BAM42454.1 - 4.9e-05 23.3 3.8 4.9e-05 23.3 3.8 2.8 3 0 0 3 3 3 1 RING-type zinc-finger zf-RING_5 PF14634.6 BAM42454.1 - 0.00011 22.1 6.8 0.00011 22.1 6.8 3.3 4 0 0 4 4 4 1 zinc-RING finger domain Histone PF00125.24 BAM42455.1 - 1.5e-17 64.2 0.4 1.7e-17 64.0 0.4 1.1 1 0 0 1 1 1 1 Core histone H2A/H2B/H3/H4 TFIID_20kDa PF03847.13 BAM42455.1 - 0.004 17.6 0.0 0.0073 16.8 0.0 1.4 1 0 0 1 1 1 1 Transcription initiation factor TFIID subunit A CBFD_NFYB_HMF PF00808.23 BAM42455.1 - 0.02 15.1 0.2 0.04 14.2 0.0 1.6 2 0 0 2 2 2 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone YscO-like PF16789.5 BAM42455.1 - 0.13 12.3 0.1 0.13 12.2 0.1 1.2 1 0 0 1 1 1 0 YscO-like protein Tsp45I PF06300.12 BAM42457.1 - 0.055 13.0 2.7 0.98 8.9 1.0 2.3 1 1 0 2 2 2 0 Tsp45I type II restriction enzyme ATP-synt_S1 PF05827.12 BAM42458.1 - 0.47 10.3 4.1 0.22 11.3 1.2 1.9 2 0 0 2 2 2 0 Vacuolar ATP synthase subunit S1 (ATP6S1) FAINT PF04385.15 BAM42459.1 - 2.1e-20 72.5 21.4 1e-06 28.7 0.8 4.6 4 0 0 4 4 4 4 Domain of unknown function, DUF529 FAINT PF04385.15 BAM42460.1 - 8.4e-06 25.8 7.5 2.1e-05 24.5 0.7 2.6 2 0 0 2 2 2 2 Domain of unknown function, DUF529 RRM_1 PF00076.22 BAM42461.1 - 8.1e-40 134.5 0.0 3.9e-20 71.5 0.0 2.1 2 0 0 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_3 PF08777.11 BAM42461.1 - 0.0003 20.8 0.1 0.26 11.3 0.0 2.2 2 0 0 2 2 2 2 RNA binding motif Limkain-b1 PF11608.8 BAM42461.1 - 0.00047 20.2 0.2 0.11 12.6 0.0 2.6 2 1 0 2 2 2 2 Limkain b1 RRM_5 PF13893.6 BAM42461.1 - 0.0006 19.4 0.0 1.1 8.8 0.0 2.1 1 1 1 2 2 2 2 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Auto_anti-p27 PF06677.12 BAM42462.1 - 1.8e-13 50.4 5.5 2.9e-13 49.7 5.5 1.3 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Thioredoxin PF00085.20 BAM42463.1 - 2.6e-12 46.6 0.1 4e-12 46.0 0.1 1.3 1 0 0 1 1 1 1 Thioredoxin Phosducin PF02114.16 BAM42463.1 - 9.8e-11 41.1 0.1 1.2e-10 40.8 0.1 1.0 1 0 0 1 1 1 1 Phosducin TraF PF13728.6 BAM42463.1 - 0.023 14.5 0.0 0.044 13.6 0.0 1.4 1 0 0 1 1 1 0 F plasmid transfer operon protein Ada3 PF10198.9 BAM42463.1 - 0.047 13.8 3.3 0.065 13.4 2.7 1.5 1 1 1 2 2 2 0 Histone acetyltransferases subunit 3 EAGR_box PF16713.5 BAM42464.1 - 0.075 12.7 6.2 2.9 7.7 0.3 2.7 2 1 0 2 2 2 0 Enriched in aromatic and glycine Residues box tRNA_m1G_MT PF01746.21 BAM42465.1 - 1.7e-22 80.1 0.0 2.1e-22 79.8 0.0 1.1 1 0 0 1 1 1 1 tRNA (Guanine-1)-methyltransferase CAF1 PF04857.20 BAM42465.1 - 0.023 13.9 0.0 0.026 13.7 0.0 1.1 1 0 0 1 1 1 0 CAF1 family ribonuclease Peptidase_M24 PF00557.24 BAM42466.1 - 3.3e-52 177.2 0.0 5.3e-52 176.6 0.0 1.3 1 0 0 1 1 1 1 Metallopeptidase family M24 zf-C6H2 PF15801.5 BAM42466.1 - 4.8e-11 42.8 9.6 1.4e-10 41.3 9.6 1.8 1 0 0 1 1 1 1 zf-MYND-like zinc finger, mRNA-binding RMI1_N PF08585.12 BAM42466.1 - 2e-05 24.5 0.0 6.1e-05 22.9 0.0 1.8 2 0 0 2 2 2 1 RecQ mediated genome instability protein zf-MYND PF01753.18 BAM42466.1 - 2.7 8.2 10.4 0.46 10.6 5.9 2.2 2 0 0 2 2 2 0 MYND finger FAINT PF04385.15 BAM42467.1 - 9.2e-18 64.1 30.2 1.3e-06 28.3 1.2 6.3 6 1 0 6 6 6 5 Domain of unknown function, DUF529 EMA PF02488.15 BAM42467.1 - 0.041 13.5 10.1 0.18 11.5 0.4 4.2 3 1 1 4 4 4 0 Merozoite Antigen DUF2671 PF10877.8 BAM42467.1 - 0.071 12.9 4.5 11 5.9 0.1 4.1 4 0 0 4 4 4 0 Protein of unknown function (DUF2671) Sushi PF00084.20 BAM42467.1 - 0.28 11.8 1.3 1.1e+02 3.5 0.1 3.7 3 0 0 3 3 3 0 Sushi repeat (SCR repeat) Baculo_LEF5 PF04838.12 BAM42467.1 - 0.99 9.4 5.4 0.76 9.8 0.1 2.9 3 0 0 3 3 3 0 Baculoviridae late expression factor 5 FAINT PF04385.15 BAM42468.1 - 1.3e-21 76.4 26.9 6.4e-05 22.9 0.9 5.8 5 0 0 5 5 5 5 Domain of unknown function, DUF529 DUF764 PF05561.11 BAM42468.1 - 0.0081 16.0 0.1 6.2 6.6 0.0 2.5 2 0 0 2 2 2 2 Borrelia burgdorferi protein of unknown function (DUF764) DUF4755 PF15947.5 BAM42468.1 - 0.67 9.9 3.5 38 4.3 0.0 3.6 4 0 0 4 4 4 0 Domain of unknown function (DUF4755) NTP_transf_2 PF01909.23 BAM42470.1 - 5e-08 33.1 0.0 1.9e-07 31.3 0.0 2.0 1 1 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 BAM42470.1 - 0.0029 17.7 0.1 0.036 14.1 0.0 2.5 1 1 1 2 2 2 1 Polymerase beta, Nucleotidyltransferase Nrap_D2 PF17403.2 BAM42470.1 - 0.0059 16.4 0.0 0.012 15.4 0.0 1.5 1 0 0 1 1 1 1 Nrap protein PAP/OAS-like domain PAP_assoc PF03828.19 BAM42470.1 - 0.12 12.6 0.3 0.85 9.9 0.0 2.3 2 0 0 2 2 2 0 Cid1 family poly A polymerase Cpn60_TCP1 PF00118.24 BAM42471.1 - 4e-96 322.6 12.2 5.3e-96 322.2 12.2 1.2 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family Ribosomal_S5 PF00333.20 BAM42473.1 - 1.8e-13 50.3 0.2 3.4e-13 49.4 0.2 1.5 1 0 0 1 1 1 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 BAM42473.1 - 9.3e-06 25.0 0.0 3.5e-05 23.2 0.0 1.9 2 0 0 2 2 2 1 Ribosomal protein S5, C-terminal domain Peptidase_M24_C PF16188.5 BAM42473.1 - 0.13 12.4 2.4 1.5 9.0 0.7 2.8 2 0 0 2 2 2 0 C-terminal region of peptidase_M24 CotJB PF12652.7 BAM42473.1 - 0.17 12.1 2.2 0.38 11.0 0.1 2.7 3 0 0 3 3 3 0 CotJB protein FAINT PF04385.15 BAM42476.1 - 3.8e-32 110.2 34.7 2.7e-07 30.5 3.8 6.9 6 0 0 6 6 6 6 Domain of unknown function, DUF529 PBP1_TM PF14812.6 BAM42476.1 - 0.00044 20.5 2.5 0.00044 20.5 2.5 3.5 3 0 0 3 3 3 1 Transmembrane domain of transglycosylase PBP1 at N-terminal Orf78 PF06024.12 BAM42476.1 - 0.0073 16.6 9.2 0.63 10.4 0.0 5.1 6 1 0 6 6 6 2 Orf78 (ac78) DUF4366 PF14283.6 BAM42476.1 - 0.011 15.7 0.0 0.22 11.6 0.0 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4366) LAP1C PF05609.12 BAM42476.1 - 0.025 13.7 6.4 0.093 11.8 4.2 2.2 2 0 0 2 2 2 0 Lamina-associated polypeptide 1C (LAP1C) DUF3377 PF11857.8 BAM42476.1 - 0.029 14.3 0.8 1.1 9.2 0.0 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF3377) TMEM154 PF15102.6 BAM42476.1 - 0.8 9.6 0.0 0.8 9.6 0.0 2.9 3 1 0 3 3 3 0 TMEM154 protein family Hemopexin PF00045.19 BAM42476.1 - 0.8 9.7 4.4 64 3.6 0.1 3.8 3 0 0 3 3 3 0 Hemopexin Sod_Fe_C PF02777.18 BAM42477.1 - 2.8e-34 117.4 1.9 2.8e-34 117.4 1.9 2.6 2 0 0 2 2 2 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 BAM42477.1 - 4.5e-18 65.5 2.2 1.7e-17 63.7 2.2 2.1 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, alpha-hairpin domain TrmE_N PF10396.9 BAM42478.1 - 2.1e-31 108.6 0.0 4.7e-31 107.5 0.0 1.6 1 0 0 1 1 1 1 GTP-binding protein TrmE N-terminus MnmE_helical PF12631.7 BAM42478.1 - 2e-19 70.6 2.6 3.1e-19 70.0 2.6 1.3 1 0 0 1 1 1 1 MnmE helical domain MMR_HSR1 PF01926.23 BAM42478.1 - 9.7e-18 64.3 0.2 2.6e-17 63.0 0.2 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase FeoB_N PF02421.18 BAM42478.1 - 1.7e-08 34.1 0.0 4.8e-08 32.7 0.0 1.8 1 0 0 1 1 1 1 Ferrous iron transport protein B Gtr1_RagA PF04670.12 BAM42478.1 - 1.3e-07 31.2 1.1 2.4e-07 30.4 0.5 1.7 1 1 0 1 1 1 1 Gtr1/RagA G protein conserved region Dynamin_N PF00350.23 BAM42478.1 - 4.5e-05 23.6 2.4 4.5e-05 23.6 2.4 3.6 3 1 0 3 3 3 1 Dynamin family Ras PF00071.22 BAM42478.1 - 0.00028 20.5 0.3 0.0084 15.7 0.0 2.6 2 1 0 2 2 2 1 Ras family Roc PF08477.13 BAM42478.1 - 0.0055 16.9 0.0 0.04 14.1 0.0 2.4 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 BAM42478.1 - 0.0072 15.8 1.3 0.15 11.5 0.0 2.3 2 0 0 2 2 2 1 ADP-ribosylation factor family AAA PF00004.29 BAM42478.1 - 0.053 13.9 0.0 0.19 12.2 0.0 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) DUF3848 PF12959.7 BAM42478.1 - 0.066 13.3 0.2 1.4 9.0 0.0 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3848) Cdc13_OB2 PF18691.1 BAM42478.1 - 0.084 12.9 4.0 0.082 13.0 0.6 2.6 2 1 0 2 2 2 0 Cell division control protein 13, OB2 domain AIG1 PF04548.16 BAM42478.1 - 0.14 11.5 5.7 0.016 14.5 1.2 1.9 2 1 0 2 2 2 0 AIG1 family XhlA PF10779.9 BAM42478.1 - 0.23 11.7 5.3 7.4 6.9 0.1 3.3 3 0 0 3 3 2 0 Haemolysin XhlA TSC22 PF01166.18 BAM42478.1 - 4.8 7.6 6.7 0.39 11.1 0.9 2.3 3 0 0 3 3 1 0 TSC-22/dip/bun family Csm2_III-A PF03750.13 BAM42478.1 - 6.8 7.6 7.6 18 6.2 1.9 3.6 2 2 1 4 4 4 0 Csm2 Type III-A FAINT PF04385.15 BAM42479.1 - 1.5e-07 31.4 15.8 4.8e-06 26.5 0.8 3.1 3 1 0 3 3 3 2 Domain of unknown function, DUF529 DUF4868 PF16162.5 BAM42479.1 - 0.056 13.4 0.6 0.1 12.6 0.6 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4868) SNF2_N PF00176.23 BAM42480.1 - 8.7e-52 176.0 6.8 3.5e-45 154.2 0.1 2.9 3 0 0 3 3 3 2 SNF2 family N-terminal domain Helicase_C PF00271.31 BAM42480.1 - 5.3e-19 68.6 1.3 1.7e-18 67.0 0.1 2.6 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 BAM42480.1 - 3.2e-06 26.6 0.2 1.1e-05 24.8 0.2 2.1 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase ResIII PF04851.15 BAM42480.1 - 0.013 15.5 0.0 0.013 15.5 0.0 3.9 3 1 1 4 4 4 0 Type III restriction enzyme, res subunit FAINT PF04385.15 BAM42481.1 - 0.0013 18.8 0.7 0.0013 18.8 0.7 2.8 3 1 0 3 3 3 1 Domain of unknown function, DUF529 FAINT PF04385.15 BAM42482.1 - 0.0083 16.2 9.0 0.0083 16.2 9.0 5.1 5 1 0 5 5 5 3 Domain of unknown function, DUF529 FAINT PF04385.15 BAM42483.1 - 0.0038 17.2 1.5 0.0073 16.3 1.5 1.5 1 0 0 1 1 1 1 Domain of unknown function, DUF529 FAINT PF04385.15 BAM42484.1 - 8.4e-05 22.6 4.6 0.12 12.4 0.0 4.4 3 0 0 3 3 3 3 Domain of unknown function, DUF529 FAINT PF04385.15 BAM42486.1 - 5.2e-24 84.1 42.3 3.9e-05 23.6 0.1 8.6 8 1 1 9 9 9 7 Domain of unknown function, DUF529 BclA_C PF18573.1 BAM42486.1 - 0.97 9.4 6.1 1.2 9.0 0.3 3.2 3 1 1 4 4 4 0 BclA C-terminal domain FAINT PF04385.15 BAM42488.1 - 4.9e-16 58.6 12.6 3.5e-09 36.6 1.2 3.6 4 0 0 4 4 4 2 Domain of unknown function, DUF529 FAINT PF04385.15 BAM42489.1 - 1e-06 28.7 5.6 0.017 15.2 0.4 2.8 2 0 0 2 2 2 2 Domain of unknown function, DUF529 T3SSipB PF16535.5 BAM42489.1 - 0.069 13.6 4.5 0.12 12.8 4.5 1.3 1 0 0 1 1 1 0 Type III cell invasion protein SipB EAP30 PF04157.16 BAM42489.1 - 0.12 11.7 0.5 0.23 10.7 0.5 1.5 1 0 0 1 1 1 0 EAP30/Vps36 family RP-C_C PF11800.8 BAM42489.1 - 4.3 7.4 8.4 0.13 12.3 1.0 2.1 2 0 0 2 2 2 0 Replication protein C C-terminal region Adenylsucc_synt PF00709.21 BAM42491.1 - 5.2e-120 401.2 0.0 4.4e-71 240.0 0.0 2.0 1 1 1 2 2 2 2 Adenylosuccinate synthetase Plus-3 PF03126.18 BAM42491.1 - 0.028 14.9 0.1 0.053 14.0 0.1 1.4 1 0 0 1 1 1 0 Plus-3 domain HAD_2 PF13419.6 BAM42491.1 - 0.1 12.7 0.0 0.19 11.8 0.0 1.4 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase Rubredoxin PF00301.20 BAM42491.1 - 0.23 11.5 1.6 0.48 10.5 0.1 2.2 2 0 0 2 2 2 0 Rubredoxin PHD PF00628.29 BAM42492.1 - 3.9e-22 77.9 54.9 9.1e-09 35.1 15.7 4.1 2 1 2 4 4 4 3 PHD-finger C1_1 PF00130.22 BAM42492.1 - 0.0052 16.7 2.7 0.0052 16.7 2.7 5.3 4 1 2 6 6 6 2 Phorbol esters/diacylglycerol binding domain (C1 domain) PHD_2 PF13831.6 BAM42492.1 - 0.013 15.0 1.4 0.013 15.0 1.4 5.5 7 1 0 7 7 7 0 PHD-finger RRM_1 PF00076.22 BAM42493.1 - 8.4e-27 92.8 1.6 9.2e-17 60.6 0.0 4.8 5 0 0 5 5 5 4 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) RRM_7 PF16367.5 BAM42493.1 - 0.00057 20.0 0.0 0.097 12.8 0.0 3.2 3 1 0 3 3 3 1 RNA recognition motif RRM_occluded PF16842.5 BAM42493.1 - 0.0071 16.2 0.0 0.097 12.6 0.0 2.7 3 0 0 3 3 3 1 Occluded RNA-recognition motif BRAP2 PF07576.12 BAM42493.1 - 0.11 12.8 0.0 22 5.4 0.0 2.8 3 0 0 3 3 3 0 BRCA1-associated protein 2 DUF4806 PF16064.5 BAM42493.1 - 0.12 12.7 0.0 0.29 11.5 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4806) FAINT PF04385.15 BAM42495.1 - 8e-29 99.5 92.4 4.1e-05 23.6 3.2 15.9 17 0 0 17 17 17 12 Domain of unknown function, DUF529 AhpC-TSA PF00578.21 BAM42497.1 - 6.1e-36 123.1 0.0 7.8e-36 122.7 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 BAM42497.1 - 1.1e-14 54.4 0.0 1.3e-14 54.1 0.0 1.1 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 BAM42497.1 - 7.6e-10 38.5 0.1 1.5e-09 37.5 0.1 1.6 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin SCO1-SenC PF02630.14 BAM42497.1 - 0.11 12.4 0.2 0.21 11.5 0.2 1.4 1 0 0 1 1 1 0 SCO1/SenC FAINT PF04385.15 BAM42498.1 - 1.3e-05 25.2 0.2 2.4e-05 24.3 0.2 1.5 1 0 0 1 1 1 1 Domain of unknown function, DUF529 AceK PF06315.11 BAM42498.1 - 0.031 12.8 0.0 0.043 12.3 0.0 1.1 1 0 0 1 1 1 0 Isocitrate dehydrogenase kinase/phosphatase (AceK) GN3L_Grn1 PF08701.11 BAM42499.1 - 4.4e-09 36.3 14.7 4.8e-09 36.2 14.7 1.0 1 0 0 1 1 1 1 GNL3L/Grn1 putative GTPase VCBS PF13517.6 BAM42501.1 - 6.3e-15 55.5 9.5 5.5e-08 33.3 0.0 5.1 4 1 0 4 4 4 3 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella FG-GAP PF01839.23 BAM42501.1 - 3.4e-08 33.4 2.0 0.04 14.0 0.2 4.8 4 0 0 4 4 4 3 FG-GAP repeat TcdB_toxin_midN PF12256.8 BAM42501.1 - 0.0011 18.4 0.0 4.2 6.7 0.0 3.9 3 1 1 4 4 4 2 Insecticide toxin TcdB middle/N-terminal region DUF3855 PF12967.7 BAM42503.1 - 0.026 14.5 0.0 0.031 14.3 0.0 1.2 1 0 0 1 1 1 0 Domain of Unknown Function with PDB structure (DUF3855) UPF0167 PF03691.14 BAM42505.1 - 0.045 13.5 0.3 0.12 12.1 0.1 1.8 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0167) PDE4_UCR PF18100.1 BAM42505.1 - 0.12 13.1 2.4 0.13 12.9 0.6 2.0 1 1 1 2 2 2 0 Phosphodiesterase 4 upstream conserved regions (UCR) Med27 PF11571.8 BAM42505.1 - 0.24 11.8 1.3 2.1 8.7 0.1 2.7 3 0 0 3 3 3 0 Mediator complex subunit 27 DUF4795 PF16043.5 BAM42505.1 - 0.9 9.1 9.3 0.89 9.1 7.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) Pre-PUA PF17832.1 BAM42506.1 - 3.7e-24 85.2 0.1 8.9e-24 84.0 0.1 1.6 2 0 0 2 2 2 1 Pre-PUA-like domain PUA PF01472.20 BAM42506.1 - 1.7e-11 43.9 0.0 2.5e-11 43.4 0.0 1.3 1 0 0 1 1 1 1 PUA domain DUF4600 PF15372.6 BAM42508.1 - 0.13 12.7 1.5 0.31 11.5 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4600) Hydrolase_4 PF12146.8 BAM42509.1 - 1.9e-14 53.6 0.0 6.4e-14 51.8 0.0 1.8 1 1 0 1 1 1 1 Serine aminopeptidase, S33 FAINT PF04385.15 BAM42509.1 - 4.4e-10 39.5 19.5 2.7e-06 27.4 0.6 4.7 5 0 0 5 5 5 2 Domain of unknown function, DUF529 Abhydrolase_6 PF12697.7 BAM42509.1 - 8e-05 23.3 0.1 0.00024 21.8 0.0 1.8 2 0 0 2 2 2 1 Alpha/beta hydrolase family DUF2974 PF11187.8 BAM42509.1 - 0.12 11.9 0.0 0.22 11.0 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) EAP30 PF04157.16 BAM42510.1 - 5.6e-26 91.3 0.0 7.4e-26 90.9 0.0 1.2 1 0 0 1 1 1 1 EAP30/Vps36 family Ribosomal_L16 PF00252.18 BAM42510.1 - 7.8e-18 64.8 0.1 1.4e-17 63.9 0.1 1.4 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e KIP1 PF07765.12 BAM42510.1 - 0.061 13.5 1.0 0.14 12.2 1.0 1.6 1 0 0 1 1 1 0 KIP1-like protein INCENP_ARK-bind PF03941.15 BAM42510.1 - 0.14 12.2 0.0 0.28 11.2 0.0 1.4 1 0 0 1 1 1 0 Inner centromere protein, ARK binding region Ribosomal_L4 PF00573.22 BAM42510.1 - 0.74 9.5 3.2 1.2 8.8 0.3 2.1 2 0 0 2 2 2 0 Ribosomal protein L4/L1 family CTP_transf_1 PF01148.20 BAM42512.1 - 2.9e-58 197.7 23.0 9.9e-54 182.9 10.9 2.2 2 0 0 2 2 2 2 Cytidylyltransferase family Ninjurin PF04923.12 BAM42512.1 - 2 8.4 9.3 0.26 11.2 1.7 3.0 3 0 0 3 3 3 0 Ninjurin Fer2 PF00111.27 BAM42513.1 - 6.1e-15 54.9 1.9 6.1e-15 54.9 1.9 1.7 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Ribosomal_S19 PF00203.21 BAM42514.1 - 1.8e-33 114.3 0.1 2.5e-33 113.8 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S19 Ctr PF04145.15 BAM42515.1 - 9.3e-12 45.8 16.3 3.5e-06 27.7 11.0 2.3 1 1 1 2 2 2 2 Ctr copper transporter family EAP30 PF04157.16 BAM42516.1 - 0.0033 16.7 0.0 0.0033 16.7 0.0 1.1 1 0 0 1 1 1 1 EAP30/Vps36 family S_layer_N PF05123.12 BAM42516.1 - 0.054 13.4 0.6 0.059 13.2 0.6 1.0 1 0 0 1 1 1 0 S-layer like family, N-terminal region PepSY_TM PF03929.16 BAM42517.1 - 2.2 7.9 4.4 2.4 7.8 3.5 1.6 1 1 0 1 1 1 0 PepSY-associated TM region CBF PF03914.17 BAM42518.1 - 6.3e-08 32.8 4.7 3.2e-07 30.5 3.2 2.7 2 1 0 2 2 2 1 CBF/Mak21 family Rota_NSP4 PF01452.16 BAM42518.1 - 0.071 12.8 0.0 0.14 11.8 0.0 1.5 1 0 0 1 1 1 0 Rotavirus non structural protein VEFS-Box PF09733.9 BAM42518.1 - 0.16 11.8 1.5 0.35 10.7 1.5 1.5 1 0 0 1 1 1 0 VEFS-Box of polycomb protein DUF5345 PF17280.2 BAM42520.1 - 0.039 13.9 0.0 0.052 13.5 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5345) MCM PF00493.23 BAM42521.1 - 1.3e-80 269.7 0.1 8.4e-80 267.1 0.1 2.3 3 0 0 3 3 3 1 MCM P-loop domain ABC_tran PF00005.27 BAM42521.1 - 2.6e-33 115.4 1.6 1.3e-18 67.8 0.0 3.8 3 0 0 3 3 3 2 ABC transporter MCM_lid PF17855.1 BAM42521.1 - 2.3e-19 69.6 1.3 6.6e-19 68.1 1.3 1.9 1 0 0 1 1 1 1 MCM AAA-lid domain MCM_OB PF17207.3 BAM42521.1 - 1.8e-12 47.2 4.4 3.5e-08 33.3 1.7 2.7 2 0 0 2 2 2 2 MCM OB domain AAA_5 PF07728.14 BAM42521.1 - 4.7e-10 39.6 0.4 8.2e-08 32.3 0.0 3.7 3 0 0 3 3 3 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 BAM42521.1 - 5.2e-09 35.8 0.6 3.4e-06 26.6 0.0 3.4 2 1 1 3 3 3 1 Magnesium chelatase, subunit ChlI ABC_membrane PF00664.23 BAM42521.1 - 1.9e-07 31.0 26.4 1.9e-07 31.0 26.4 3.7 4 0 0 4 4 3 1 ABC transporter transmembrane region MCM_N PF14551.6 BAM42521.1 - 5.6e-07 30.1 0.7 3e-06 27.8 0.2 2.7 2 0 0 2 2 1 1 MCM N-terminal domain MeaB PF03308.16 BAM42521.1 - 5e-05 22.4 0.1 0.14 11.1 0.1 2.5 2 0 0 2 2 2 2 Methylmalonyl Co-A mutase-associated GTPase MeaB RsgA_GTPase PF03193.16 BAM42521.1 - 8.7e-05 22.5 0.5 0.052 13.4 0.1 2.9 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 BAM42521.1 - 0.00018 21.9 0.0 1.9 8.9 0.0 3.5 3 0 0 3 3 3 1 AAA ATPase domain AAA_29 PF13555.6 BAM42521.1 - 0.00027 20.6 1.2 2.1 8.2 0.0 3.5 3 0 0 3 3 3 1 P-loop containing region of AAA domain Sigma54_activat PF00158.26 BAM42521.1 - 0.00043 20.0 1.1 0.23 11.2 0.0 4.1 4 1 0 4 4 4 1 Sigma-54 interaction domain Zeta_toxin PF06414.12 BAM42521.1 - 0.00049 19.4 0.1 0.34 10.2 0.0 2.6 2 0 0 2 2 2 2 Zeta toxin AAA_30 PF13604.6 BAM42521.1 - 0.003 17.3 0.1 0.11 12.2 0.0 2.7 2 0 0 2 2 2 1 AAA domain AAA_3 PF07726.11 BAM42521.1 - 0.0048 16.8 0.0 0.023 14.6 0.0 2.2 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) TsaE PF02367.17 BAM42521.1 - 0.0056 16.7 0.1 2.3 8.2 0.0 2.6 2 0 0 2 2 2 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE T2SSE PF00437.20 BAM42521.1 - 0.012 14.7 0.2 5.1 6.1 0.0 2.4 2 0 0 2 2 2 0 Type II/IV secretion system protein ATP_bind_1 PF03029.17 BAM42521.1 - 0.016 15.0 1.6 1.3 8.7 0.2 2.9 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_7 PF12775.7 BAM42521.1 - 0.022 14.3 4.1 8.1 5.9 0.2 3.5 3 0 0 3 3 3 0 P-loop containing dynein motor region cobW PF02492.19 BAM42521.1 - 0.03 13.9 8.8 2 8.0 0.2 3.7 4 0 0 4 4 3 0 CobW/HypB/UreG, nucleotide-binding domain AAA_18 PF13238.6 BAM42521.1 - 0.031 14.8 0.1 11 6.6 0.0 3.4 3 0 0 3 3 2 0 AAA domain MMR_HSR1 PF01926.23 BAM42521.1 - 0.065 13.3 1.0 2.9 8.0 0.2 3.0 2 0 0 2 2 2 0 50S ribosome-binding GTPase FtsK_SpoIIIE PF01580.18 BAM42521.1 - 0.16 11.3 0.4 8.8 5.6 0.0 3.1 4 0 0 4 4 3 0 FtsK/SpoIIIE family AAA_33 PF13671.6 BAM42521.1 - 0.16 12.1 4.1 16 5.7 0.5 3.9 4 0 0 4 4 3 0 AAA domain SRP54 PF00448.22 BAM42521.1 - 0.29 10.7 1.7 0.35 10.5 0.1 2.0 2 0 0 2 2 1 0 SRP54-type protein, GTPase domain SMC_N PF02463.19 BAM42521.1 - 0.34 10.3 2.7 0.57 9.6 0.1 2.6 3 0 0 3 3 3 0 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 BAM42521.1 - 0.48 10.7 1.7 32 4.8 0.0 3.6 3 0 0 3 3 3 0 AAA domain HILPDA PF15220.6 BAM42521.1 - 0.87 9.8 2.7 3.3 7.9 2.7 2.0 1 0 0 1 1 1 0 Hypoxia-inducible lipid droplet-associated Adeno_E3_CR2 PF02439.15 BAM42521.1 - 1.1 9.1 3.5 0.69 9.7 0.2 2.4 2 0 0 2 2 1 0 Adenovirus E3 region protein CR2 FAINT PF04385.15 BAM42522.1 - 1.7e-05 24.8 2.1 3.9e-05 23.6 2.1 1.6 1 0 0 1 1 1 1 Domain of unknown function, DUF529 Fez1 PF06818.15 BAM42522.1 - 0.005 17.3 12.4 0.005 17.3 12.4 3.0 2 1 1 3 3 3 1 Fez1 DUF4470 PF14737.6 BAM42522.1 - 0.0086 16.2 0.1 2.1 8.6 0.3 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF4470) AAA_13 PF13166.6 BAM42522.1 - 0.082 11.5 20.7 0.022 13.4 11.5 2.1 2 0 0 2 2 2 0 AAA domain zf-C4H2 PF10146.9 BAM42522.1 - 2.4 8.4 13.5 0.37 11.1 6.3 2.4 2 0 0 2 2 2 0 Zinc finger-containing protein DUF948 PF06103.11 BAM42522.1 - 2.9 8.2 8.9 1.6 9.1 2.3 2.7 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) PhosphMutase PF10143.9 BAM42522.1 - 4.3 7.2 11.9 1.9 8.4 1.3 3.2 2 1 1 3 3 3 0 2,3-bisphosphoglycerate-independent phosphoglycerate mutase TFR_dimer PF04253.15 BAM42522.1 - 4.8 7.3 9.4 0.99 9.5 1.0 2.6 2 0 0 2 2 2 0 Transferrin receptor-like dimerisation domain DUF2730 PF10805.8 BAM42522.1 - 7.6 6.7 18.6 1.7 8.8 1.1 3.0 2 1 0 3 3 3 0 Protein of unknown function (DUF2730) Synaptonemal_3 PF15191.6 BAM42522.1 - 7.8 6.4 11.7 1.2 8.9 2.8 3.2 3 0 0 3 3 3 0 Synaptonemal complex central element protein 3 Peptidase_C1 PF00112.23 BAM42525.1 - 1e-43 150.0 0.6 2.5e-43 148.7 0.6 1.6 1 0 0 1 1 1 1 Papain family cysteine protease FAINT PF04385.15 BAM42525.1 - 5.1e-06 26.5 2.4 0.13 12.3 0.2 3.4 2 2 0 2 2 2 2 Domain of unknown function, DUF529 Inhibitor_I29 PF08246.12 BAM42525.1 - 2.1e-05 24.9 2.5 8.8e-05 22.9 2.5 2.2 1 0 0 1 1 1 1 Cathepsin propeptide inhibitor domain (I29) Peptidase_C1_2 PF03051.15 BAM42525.1 - 0.00083 18.2 0.5 0.0016 17.3 0.5 1.4 1 0 0 1 1 1 1 Peptidase C1-like family NOG1 PF06858.14 BAM42525.1 - 0.096 12.5 0.0 25 4.8 0.0 2.5 2 0 0 2 2 2 0 Nucleolar GTP-binding protein 1 (NOG1) PrsW-protease PF13367.6 BAM42526.1 - 0.35 10.3 2.0 0.54 9.7 0.2 2.0 2 0 0 2 2 2 0 PrsW family intramembrane metalloprotease Ribosom_S12_S23 PF00164.25 BAM42527.1 - 3.1e-25 88.0 4.0 3.5e-25 87.8 4.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S12/S23 Enterotoxin_b PF01376.18 BAM42527.1 - 0.088 13.0 0.0 0.12 12.5 0.0 1.4 1 1 0 1 1 1 0 Heat-labile enterotoxin beta chain Ribosomal_L16 PF00252.18 BAM42528.1 - 7.7e-18 64.8 0.1 1e-17 64.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e Ribosomal_L2_C PF03947.18 BAM42529.1 - 2.7e-32 111.6 0.0 3.5e-32 111.2 0.0 1.1 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_S19 PF00203.21 BAM42529.1 - 0.00021 21.1 0.5 0.00042 20.1 0.5 1.5 1 0 0 1 1 1 1 Ribosomal protein S19 RNA_pol_Rpb1_5 PF04998.17 BAM42530.1 - 2.1e-10 40.5 0.0 2.1e-10 40.5 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 RNA_pol_Rpb2_6 PF00562.28 BAM42531.1 - 2.5e-54 184.9 0.0 4.1e-54 184.1 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb1_2 PF00623.20 BAM42531.1 - 1.9e-21 77.0 0.1 8.5e-16 58.6 0.1 2.5 1 1 1 2 2 2 2 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb2_7 PF04560.20 BAM42531.1 - 1.8e-09 37.9 0.0 4.4e-09 36.6 0.0 1.7 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 AAA_2 PF07724.14 BAM42532.1 - 5.9e-09 36.3 0.1 8e-09 35.8 0.1 1.2 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) COX1 PF00115.20 BAM42533.1 - 1.4e-85 287.7 48.4 1.7e-85 287.5 48.4 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Theileria_orientalis-strain-Shintoku-ASM74089v1/GCA_000740895.1_ASM74089v1_protein.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Theileria_orientalis-strain-Shintoku-ASM74089v1/GCA_000740895.1_ASM74089v1_protein.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Theileria_orientalis-strain-Shintoku-ASM74089v1/GCA_000740895.1_ASM74089v1_protein.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Theileria_orientalis-strain-Shintoku-ASM74089v1/GCA_000740895.1_ASM74089v1_protein.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Sun Mar 24 01:27:19 2019 # [ok]