# 433 26.9 2.0 3.3 chr1 1970780 1970929 (247279692) + LTR81B LTR/Gypsy 75 222 (1171) 2632 245 33.3 4.5 0.0 chr1 1972318 1972449 (247278172) + LTR81 LTR/Gypsy 777 914 (275) 2637 270 22.2 4.1 1.4 chr1 2280676 2280748 (246969873) + LTR81C LTR/Gypsy 907 981 (172) 2978 574 24.9 6.9 4.7 chr1 4444718 4444949 (244805672) C LTR81AB LTR/Gypsy (22) 256 20 4993 245 24.2 1.6 0.0 chr1 5020282 5020343 (244230278) + MamGypLTR1a LTR/Gypsy 686 748 (36) 5774 459 28.3 8.3 4.7 chr1 5431868 5432145 (243818476) + LTR81B LTR/Gypsy 42 329 (1064) 6371 233 30.7 16.7 1.2 chr1 6985384 6985551 (242265070) C LTR81 LTR/Gypsy (6) 1183 990 8765 336 29.3 13.3 3.7 chr1 6985567 6985860 (242264761) C LTR81B LTR/Gypsy (234) 1159 838 8766 461 30.1 22.4 1.7 chr1 6987911 6988277 (242262344) C LTR81B LTR/Gypsy (764) 629 188 8777 381 27.9 16.4 7.9 chr1 8218535 8219078 (241031543) + MamGypLTR2c LTR/Gypsy 423 1012 (56) 10670 247 26.3 26.1 0.6 chr1 8331209 8331365 (240919256) C MamGypLTR1b LTR/Gypsy (577) 205 9 10963 376 26.5 1.5 2.2 chr1 8375406 8375540 (240875081) C LTR81B LTR/Gypsy (1131) 262 129 11061 229 16.4 2.9 10.3 chr1 11630734 11630801 (237619820) + MamGypLTR1a LTR/Gypsy 76 138 (646) 17385 277 25.4 14.3 6.3 chr1 14384682 14384807 (234865814) C MamGypLTR1c LTR/Gypsy (437) 366 231 22016 470 29.0 18.5 1.6 chr1 14502547 14502795 (234747826) C MamGypLTR2c LTR/Gypsy (54) 1014 724 22211 229 24.8 3.8 3.8 chr1 14503147 14503251 (234747370) C MamGypLTR2c LTR/Gypsy (929) 139 35 22211 501 30.5 13.3 8.3 chr1 14849282 14849906 (234400715) C MamGypLTR1a LTR/Gypsy (10) 774 119 22786 553 30.5 9.6 3.9 chr1 14855813 14856146 (234394475) + LTR81C LTR/Gypsy 39 391 (959) 22802 681 30.4 8.6 4.2 chr1 14856484 14856915 (234393706) + LTR81C LTR/Gypsy 668 1118 (35) 22802 316 34.8 15.6 1.9 chr1 15197325 15197693 (234052928) C MamGypLTR1b LTR/Gypsy (9) 773 354 23461 371 28.5 18.0 1.2 chr1 15468575 15468741 (233781880) + MamGypLTR1d LTR/Gypsy 611 805 (8) 24037 305 28.1 7.2 8.2 chr1 15472417 15472610 (233778011) C MamGypLTR1c LTR/Gypsy (17) 786 595 24047 263 35.6 0.6 4.2 chr1 15473013 15473179 (233777442) C MamGypLTR2c LTR/Gypsy (906) 162 2 24048 226 31.6 6.2 4.5 chr1 15620560 15620735 (233629886) C LTR81A LTR/Gypsy (964) 386 208 24350 406 24.6 16.9 3.9 chr1 17486678 17486812 (231763809) + MamGypLTR2b LTR/Gypsy 719 878 (44) 28040 406 24.6 16.9 3.9 chr1 17487461 17487502 (231763119) + MamGypLTR2b LTR/Gypsy 879 919 (3) 28040 320 25.0 2.8 0.9 chr1 18029907 18030021 (231220600) C LTR81A LTR/Gypsy (1106) 244 117 29198 252 22.1 0.0 10.4 chr1 18049452 18049547 (231201074) C MamGypLTR1d LTR/Gypsy (8) 805 720 29246 932 27.5 15.5 1.4 chr1 18180110 18180477 (231070144) C MamGypLTR2b LTR/Gypsy (3) 919 500 29532 277 17.8 5.1 7.6 chr1 20172401 20172479 (229078142) + MamGypLTR1a LTR/Gypsy 10 86 (698) 33617 484 29.7 5.1 0.6 chr1 20172702 20172857 (229077764) + MamGypLTR1b LTR/Gypsy 365 527 (255) 33618 260 27.1 4.7 1.2 chr1 20172904 20172989 (229077632) + MamGypLTR1b LTR/Gypsy 607 695 (89) 33618 382 32.7 8.7 2.9 chr1 20272316 20272523 (228978098) + MamGypLTR1b LTR/Gypsy 562 781 (1) 33811 263 38.1 9.2 2.6 chr1 20306748 20307019 (228943602) C MamGyp-int LTR/Gypsy (3945) 1117 828 33884 225 35.8 5.4 0.6 chr1 22712659 22712824 (226537797) C LTR81AB LTR/Gypsy (539) 650 477 38863 422 29.9 9.7 4.8 chr1 22712979 22713331 (226537290) C LTR81AB LTR/Gypsy (919) 431 54 38863 585 25.5 7.5 1.6 chr1 23263146 23263332 (225987289) C MamGypLTR1a LTR/Gypsy (0) 784 587 40069 551 29.8 9.4 7.2 chr1 23263447 23263691 (225986930) C MamGypLTR1a LTR/Gypsy (459) 325 61 40069 551 29.8 9.4 7.2 chr1 23264001 23264044 (225986577) C MamGypLTR1a LTR/Gypsy (724) 60 26 40069 551 29.8 9.4 7.2 chr1 23264326 23264352 (225986269) C MamGypLTR1a LTR/Gypsy (759) 25 1 40069 647 25.1 7.3 0.0 chr1 24202245 24202423 (225048198) + MamGypLTR1d LTR/Gypsy 1 192 (621) 42280 239 21.6 2.6 15.7 chr1 24210384 24210498 (225040123) + MamGypLTR1c LTR/Gypsy 180 279 (524) 42304 459 23.7 5.9 5.5 chr1 24237518 24237736 (225012885) + MamGypLTR1b LTR/Gypsy 87 306 (478) 42386 552 32.5 8.1 2.3 chr1 24237759 24238143 (225012478) + MamGypLTR1b LTR/Gypsy 361 767 (15) 42386 279 35.0 1.8 6.4 chr1 24347082 24347252 (224903369) C MamGypLTR2b LTR/Gypsy (731) 191 29 42631 225 24.5 11.9 6.4 chr1 24347990 24348098 (224902523) C MamGypLTR1c LTR/Gypsy (622) 181 67 42634 791 26.4 4.7 3.9 chr1 24719823 24720078 (224530543) + MamGypLTR1c LTR/Gypsy 50 307 (496) 43470 624 32.6 6.8 6.2 chr1 24727050 24727549 (224523072) + MamGypLTR1c LTR/Gypsy 311 813 (0) 43470 312 28.0 2.1 1.1 chr1 25220931 25221024 (224029597) C MamGypLTR1c LTR/Gypsy (31) 772 678 44571 244 21.0 12.9 0.0 chr1 26465461 26465522 (222785099) C MamGypLTR1b LTR/Gypsy (204) 578 509 47190 327 17.8 9.9 1.1 chr1 26541644 26541734 (222708887) C MamGypLTR1a LTR/Gypsy (683) 101 3 47347 354 31.6 11.9 3.4 chr1 27299403 27299579 (221951042) C MamGypLTR1c LTR/Gypsy (0) 803 612 49062 463 30.5 14.3 1.2 chr1 28256982 28257240 (220993381) C MamGypLTR1b LTR/Gypsy (9) 773 481 51253 299 26.6 14.6 5.3 chr1 28257887 28257994 (220992627) C MamGypLTR1b LTR/Gypsy (617) 165 43 51255 299 26.6 14.6 5.3 chr1 28258297 28258338 (220992283) C MamGypLTR1b LTR/Gypsy (740) 42 1 51255 254 18.8 6.2 1.5 chr1 29131355 29131419 (220119202) C MamGypLTR1b LTR/Gypsy (68) 714 647 53519 363 26.3 6.5 10.6 chr1 31316107 31316207 (217934414) C LTR81A LTR/Gypsy (41) 1352 1261 57424 363 26.3 6.5 10.6 chr1 31316508 31316698 (217933923) C LTR81A LTR/Gypsy (133) 1260 1072 57424 909 25.9 4.7 2.0 chr1 31317586 31317881 (217932740) C LTR81A LTR/Gypsy (1046) 304 1 57424 415 21.6 11.4 0.7 chr1 31323945 31324084 (217926537) + MamGypLTR1d LTR/Gypsy 658 812 (1) 57439 320 27.0 1.6 9.0 chr1 31911955 31912076 (217338545) + MamGypLTR1a LTR/Gypsy 91 203 (579) 58869 475 27.8 1.8 13.6 chr1 31912212 31912445 (217338176) + MamGypLTR1a LTR/Gypsy 508 723 (61) 58869 475 27.8 1.8 13.6 chr1 31912745 31912788 (217337833) + MamGypLTR1a LTR/Gypsy 724 753 (31) 58869 1345 28.1 11.4 4.0 chr1 32182477 32183205 (217067416) + MamGypLTR1a LTR/Gypsy 2 784 (0) 59338 462 30.5 4.9 4.3 chr1 34506785 34506969 (214743652) + MamGypLTR1b LTR/Gypsy 415 600 (182) 64106 756 25.4 9.5 4.9 chr1 34669316 34669621 (214581000) C LTR81 LTR/Gypsy (0) 1189 870 64394 277 23.6 4.8 13.6 chr1 35731291 35731437 (213519184) C LTR81AB LTR/Gypsy (1036) 357 224 66298 310 29.7 4.5 0.0 chr1 35731457 35731567 (213519054) C LTR81AB LTR/Gypsy (162) 116 1 66298 276 32.0 2.1 0.0 chr1 36111210 36111306 (213139315) + MamGypLTR1a LTR/Gypsy 427 525 (259) 67006 233 26.5 12.3 4.1 chr1 36117375 36117496 (213133125) + MamGypLTR1a LTR/Gypsy 618 749 (35) 67019 395 20.0 4.4 12.5 chr1 36670479 36670534 (212580087) C MamGypLTR1b LTR/Gypsy (1) 781 728 68174 395 20.0 4.4 12.5 chr1 36670832 36670934 (212579687) C MamGypLTR1b LTR/Gypsy (55) 727 635 68174 491 32.0 8.4 7.7 chr1 36854920 36855392 (212395229) + MamGypLTR1c LTR/Gypsy 19 500 (313) 68545 395 33.4 8.8 9.9 chr1 36855418 36855521 (212395100) + MamGypLTR1c LTR/Gypsy 501 588 (225) 68545 408 33.0 7.9 2.6 chr1 36855533 36855759 (212394862) + MamGypLTR1c LTR/Gypsy 535 773 (30) 68547 313 27.9 9.5 3.2 chr1 36974243 36974368 (212276253) C MamGyp-int LTR/Gypsy (4319) 743 610 68812 510 33.8 2.5 0.0 chr1 36976819 36976978 (212273643) + MamGyp-int LTR/Gypsy 3889 4052 (1010) 68818 239 30.7 5.2 5.2 chr1 37208852 37208985 (212041636) + MamGypLTR3 LTR/Gypsy 676 809 (30) 69260 240 21.1 0.0 3.7 chr1 37893310 37893363 (211357258) + MamGypLTR1d LTR/Gypsy 755 806 (7) 70414 347 33.7 4.7 3.5 chr1 37923370 37923538 (211327083) + MamGypLTR1c LTR/Gypsy 448 618 (185) 70483 230 18.4 0.0 0.0 chr1 37924003 37924040 (211326581) + MamGypLTR1c LTR/Gypsy 761 798 (15) 70483 326 9.0 4.0 2.2 chr1 38709483 38709560 (210541061) + MamGypLTR2b LTR/Gypsy 854 902 (20) 71997 557 30.5 13.3 7.0 chr1 38886076 38886572 (210364049) + MamGypLTR2c LTR/Gypsy 19 546 (522) 72280 478 34.7 7.1 3.1 chr1 39005831 39006056 (210244565) C MamGypLTR2b LTR/Gypsy (587) 335 101 72476 390 24.6 19.5 1.1 chr1 39052093 39052246 (210198375) + MamGypLTR1b LTR/Gypsy 33 206 (578) 72571 1105 35.7 9.2 4.4 chr1 39052687 39053116 (210197505) C MamGyp-int LTR/Gypsy (1832) 3230 2786 72573 1105 35.7 9.2 4.4 chr1 39053424 39054127 (210196494) C MamGyp-int LTR/Gypsy (2277) 2785 2041 72573 280 34.8 5.0 1.7 chr1 39054417 39054597 (210196024) C MamGyp-int LTR/Gypsy (3274) 1788 1602 72573 410 25.3 2.4 0.2 chr1 39066916 39067044 (210183577) + MamGypLTR1c LTR/Gypsy 651 802 (1) 72596 1074 23.8 10.3 6.0 chr1 39080547 39080926 (210169695) + MamGypLTR1d LTR/Gypsy 1 396 (417) 72620 285 24.0 15.7 8.4 chr1 39188218 39188408 (210062213) + MamGypLTR1b LTR/Gypsy 538 742 (40) 72794 325 27.5 3.7 11.1 chr1 39229236 39229452 (210021169) + MamGypLTR1b LTR/Gypsy 4 204 (578) 72878 682 30.6 7.0 2.4 chr1 39273660 39273957 (209976664) C MamGypLTR1a LTR/Gypsy (0) 784 473 72959 588 25.4 7.7 2.9 chr1 39274080 39274286 (209976335) C MamGypLTR1a LTR/Gypsy (567) 217 1 72959 796 20.8 4.7 8.7 chr1 40287997 40288249 (208962372) C LTR81A LTR/Gypsy (1107) 243 1 74979 347 25.6 6.0 5.5 chr1 41356369 41356550 (207894071) + LTR81C LTR/Gypsy 774 956 (197) 77201 490 32.3 5.4 6.0 chr1 41909851 41910183 (207340438) C MamGypLTR3 LTR/Gypsy (0) 839 509 78264 605 28.5 3.1 3.1 chr1 41924333 41924560 (207326061) + LTR81A LTR/Gypsy 1 228 (1122) 78290 472 32.5 5.9 5.2 chr1 41925158 41925462 (207325159) + MamGypLTR2c LTR/Gypsy 6 312 (756) 78292 308 31.2 5.2 4.3 chr1 42477027 42477237 (206773384) C MamGypLTR2b LTR/Gypsy (30) 892 680 79229 234 28.0 7.5 0.0 chr1 42479178 42479270 (206771351) C LTR81B LTR/Gypsy (1239) 154 55 79235 315 27.4 2.7 8.2 chr1 42578159 42578305 (206672316) + LTR81A LTR/Gypsy 79 217 (1133) 79355 264 22.7 3.6 13.1 chr1 42599753 42599856 (206650765) C LTR81B LTR/Gypsy (1091) 302 206 79391 264 22.7 9.9 13.8 chr1 42600069 42600206 (206650415) C LTR81B LTR/Gypsy (1188) 205 67 79391 271 24.5 7.9 4.0 chr1 42824604 42824765 (206425856) C LTR81B LTR/Gypsy (0) 1393 1170 79768 264 34.2 12.3 4.3 chr1 42825330 42825564 (206425057) C MamGypLTR2c LTR/Gypsy (502) 566 313 79770 563 20.8 10.5 3.2 chr1 43518000 43518218 (205732403) + MamGypLTR1b LTR/Gypsy 1 235 (547) 81034 253 24.2 19.2 0.0 chr1 43518657 43518755 (205731866) + MamGypLTR1b LTR/Gypsy 644 761 (23) 81034 318 27.3 6.8 2.7 chr1 43615171 43615317 (205635304) C LTR81B LTR/Gypsy (40) 1353 1201 81202 591 30.1 10.7 2.3 chr1 43779751 43780059 (205470562) C MamGypLTR2c LTR/Gypsy (0) 1068 734 81479 270 26.7 4.0 0.0 chr1 43780869 43780943 (205469678) C MamGypLTR2c LTR/Gypsy (969) 99 22 81479 465 34.7 4.4 1.5 chr1 43975332 43975603 (205275018) C MamGyp-int LTR/Gypsy (370) 4692 4413 81770 1324 36.5 7.0 2.1 chr1 43975800 43976648 (205273973) C MamGyp-int LTR/Gypsy (885) 4177 3288 81770 237 29.4 11.3 4.2 chr1 43992336 43992548 (205258073) + MamGypLTR3 LTR/Gypsy 355 582 (257) 81800 258 32.6 5.0 5.0 chr1 43992581 43992719 (205257902) + MamGypLTR3 LTR/Gypsy 636 774 (65) 81800 642 29.6 20.1 4.4 chr1 46262804 46262973 (202987648) + MamGypLTR3 LTR/Gypsy 30 205 (634) 85985 642 29.6 20.1 4.4 chr1 46263274 46263491 (202987130) + MamGypLTR3 LTR/Gypsy 206 479 (360) 85985 309 30.7 7.8 1.7 chr1 46265054 46265169 (202985452) + MamGypLTR3 LTR/Gypsy 715 837 (2) 85985 396 36.0 2.9 0.0 chr1 46612428 46612566 (202638055) C MamGyp-int LTR/Gypsy (1320) 3742 3600 86596 440 28.7 7.5 2.0 chr1 46613749 46613894 (202636727) C MamGyp-int LTR/Gypsy (2201) 2861 2708 86596 1901 31.5 6.9 2.9 chr1 46615795 46616475 (202634146) C MamGyp-int LTR/Gypsy (2481) 2581 1873 86596 1901 31.5 6.9 2.9 chr1 46616782 46616924 (202633697) C MamGyp-int LTR/Gypsy (3190) 1872 1724 86596 963 36.0 9.0 2.7 chr1 46617428 46618137 (202632484) C MamGyp-int LTR/Gypsy (3797) 1265 511 86596 958 30.6 3.0 6.2 chr1 46618185 46618232 (202632389) C MamGyp-int LTR/Gypsy (4697) 365 328 86596 958 30.6 3.0 6.2 chr1 46618534 46618856 (202631765) C MamGyp-int LTR/Gypsy (4735) 327 6 86596 349 26.4 9.0 2.4 chr1 46862544 46862710 (202387911) C MamGypLTR1b LTR/Gypsy (8) 774 597 87123 233 35.4 4.1 5.4 chr1 47217630 47217850 (202032771) C MamGypLTR2c LTR/Gypsy (828) 240 23 87688 709 29.7 11.3 2.4 chr1 47486837 47487164 (201763457) + LTR81A LTR/Gypsy 136 492 (858) 87956 296 32.7 12.8 3.4 chr1 47487576 47487809 (201762812) + LTR81A LTR/Gypsy 756 1011 (142) 87956 261 22.6 3.1 3.1 chr1 47749403 47749498 (201501123) + MamGypLTR2b LTR/Gypsy 824 919 (3) 88341 617 23.4 31.7 5.8 chr1 48030255 48030602 (201220019) + MamGypLTR1c LTR/Gypsy 3 444 (369) 88941 375 32.5 18.0 0.3 chr1 48144773 48145052 (201105569) C MamGypLTR1d LTR/Gypsy (7) 796 468 89159 644 27.1 7.5 4.6 chr1 48145120 48145455 (201105166) C MamGypLTR1d LTR/Gypsy (472) 331 7 89159 352 22.8 2.4 7.3 chr1 48716994 48717116 (200533505) + LTR81AB LTR/Gypsy 4 120 (158) 90119 418 31.3 13.1 8.2 chr1 48964098 48964693 (200285928) C MamGypLTR3 LTR/Gypsy (0) 839 215 90438 482 20.2 5.2 0.9 chr1 49123433 49123547 (200127074) + MamGypLTR1c LTR/Gypsy 668 787 (16) 90772 607 32.0 8.3 3.6 chr1 49356099 49356435 (199894186) + MamGypLTR1a LTR/Gypsy 9 361 (423) 91221 671 31.1 7.2 5.8 chr1 49356475 49356819 (199893802) + MamGypLTR1a LTR/Gypsy 435 784 (0) 91221 850 29.1 10.6 5.7 chr1 49567736 49568206 (199682415) + LTR81B LTR/Gypsy 898 1391 (2) 91596 595 34.5 17.6 2.6 chr1 50285399 50286002 (198964619) + MamGypLTR1b LTR/Gypsy 83 776 (6) 92725 263 24.0 9.7 2.2 chr1 50713714 50713860 (198536761) + LTR81B LTR/Gypsy 13 178 (1215) 93382 360 23.2 5.2 2.1 chr1 50713903 50713999 (198536622) + LTR81 LTR/Gypsy 1088 1187 (2) 93383 231 25.4 3.8 11.2 chr1 52369241 52369320 (196881301) C MamGypLTR3 LTR/Gypsy (338) 501 428 96606 297 27.5 14.9 6.3 chr1 53835843 53836063 (195414558) + MamGypLTR1b LTR/Gypsy 18 257 (525) 99819 245 18.6 0.0 0.0 chr1 54356134 54356176 (194894445) C MamGypLTR1d LTR/Gypsy (0) 813 771 100807 604 26.3 5.8 6.2 chr1 54597557 54597857 (194652764) + MamGypLTR3 LTR/Gypsy 483 783 (56) 101288 349 34.0 3.1 3.6 chr1 55691356 55691578 (193559043) + MamGypLTR1a LTR/Gypsy 563 784 (0) 103451 1137 24.2 3.0 3.3 chr1 55788575 55788903 (193461718) + LTR81B LTR/Gypsy 3 330 (1063) 103651 257 35.8 10.1 3.6 chr1 55789615 55789782 (193460839) + LTR81B LTR/Gypsy 1047 1225 (168) 103653 487 32.8 12.8 7.5 chr1 56202843 56203603 (193047018) + MamGypLTR1d LTR/Gypsy 13 813 (0) 104437 449 28.3 4.8 0.7 chr1 56209365 56209510 (193041111) C MamGypLTR1a LTR/Gypsy (552) 232 81 104450 249 30.2 9.2 6.7 chr1 56508521 56508804 (192741817) C LTR81B LTR/Gypsy (2) 1391 1101 104862 450 30.1 8.5 4.6 chr1 56509424 56509705 (192740916) C LTR81B LTR/Gypsy (866) 527 235 104862 520 34.4 7.6 1.4 chr1 56586319 56586861 (192663760) + LTR81A LTR/Gypsy 521 1110 (43) 104991 275 27.1 4.6 2.3 chr1 57287379 57287465 (191963156) C LTR81B LTR/Gypsy (30) 1363 1275 106325 313 32.4 11.1 0.6 chr1 58049369 58049539 (191201082) C LTR81A LTR/Gypsy (33) 1120 932 107813 387 32.9 11.3 7.8 chr1 58050080 58050587 (191200034) C LTR81A LTR/Gypsy (490) 860 424 107813 342 27.0 3.6 7.8 chr1 58261688 58261880 (190988741) C LTR81B LTR/Gypsy (9) 1384 1200 108221 362 31.2 3.2 5.0 chr1 58262950 58263168 (190987453) C LTR81B LTR/Gypsy (1093) 300 86 108221 267 33.0 0.0 1.8 chr1 58487173 58487286 (190763335) + MamGypLTR3 LTR/Gypsy 703 814 (25) 108678 414 29.3 6.0 11.8 chr1 59082126 59082692 (190167929) C MamGypLTR2c LTR/Gypsy (31) 1122 609 109825 304 25.0 7.0 0.0 chr1 59445934 59446033 (189804588) C MamGypLTR1b LTR/Gypsy (35) 747 641 110550 248 33.3 0.0 0.0 chr1 59732878 59732952 (189517669) C MamGypLTR3 LTR/Gypsy (358) 481 407 111153 386 22.0 2.9 2.0 chr1 60573826 60573927 (188676694) C LTR81B LTR/Gypsy (21) 1372 1270 112573 617 35.2 7.7 0.6 chr1 60686205 60686516 (188564105) + MamGypLTR1b LTR/Gypsy 409 742 (40) 112756 288 26.7 1.9 2.9 chr1 61182476 61182579 (188068042) C MamGypLTR3 LTR/Gypsy (15) 824 722 113565 268 25.8 19.7 3.6 chr1 61184474 61184610 (188066011) C MamGypLTR3 LTR/Gypsy (136) 703 545 113565 243 28.3 4.8 4.8 chr1 61197465 61197568 (188053053) C MamGypLTR1b LTR/Gypsy (61) 721 618 113588 334 27.3 4.5 8.4 chr1 61283164 61283451 (187967170) + LTR81AB LTR/Gypsy 25 305 (1045) 113723 349 19.4 12.3 2.8 chr1 61308673 61308778 (187941843) + LTR81AB LTR/Gypsy 1 116 (162) 113773 277 23.4 7.8 10.5 chr1 61960309 61960499 (187290122) C MamGypLTR1c LTR/Gypsy (617) 186 1 114782 491 23.6 3.9 1.6 chr1 61997135 61997263 (187253358) + MamGypLTR1a LTR/Gypsy 652 783 (1) 114860 845 25.0 5.5 1.6 chr1 62022730 62022998 (187227623) C MamGypLTR1c LTR/Gypsy (0) 803 504 114889 269 23.4 0.0 3.2 chr1 62037675 62037763 (187212858) + MamGypLTR2c LTR/Gypsy 903 1029 (124) 114913 744 30.0 14.6 7.2 chr1 62572239 62572697 (186677924) C MamGypLTR1a LTR/Gypsy (37) 747 255 116021 744 30.0 14.6 7.2 chr1 62572991 62573172 (186677449) C MamGypLTR1a LTR/Gypsy (530) 254 59 116021 366 27.9 7.4 2.5 chr1 62922073 62922234 (186328387) + LTR81AB LTR/Gypsy 76 245 (33) 116759 298 19.1 19.1 0.0 chr1 63189667 63189749 (186060872) C MamGypLTR1b LTR/Gypsy (28) 754 656 117186 293 37.4 4.8 7.4 chr1 63189829 63190140 (186060481) C MamGypLTR1b LTR/Gypsy (239) 545 242 117186 394 23.1 4.3 7.8 chr1 63193481 63193572 (186057049) C LTR81A LTR/Gypsy (1204) 146 56 117195 394 23.1 4.3 7.8 chr1 63194044 63194091 (186056530) C LTR81A LTR/Gypsy (1295) 55 11 117195 296 35.6 5.0 3.6 chr1 63529626 63529907 (185720714) C MamGypLTR2c LTR/Gypsy (2) 801 536 117790 343 28.5 7.2 7.2 chr1 63530069 63530291 (185720330) C MamGypLTR2c LTR/Gypsy (683) 385 163 117790 250 21.8 1.8 0.0 chr1 63615546 63615600 (185635021) C MamGypLTR1a LTR/Gypsy (105) 679 624 117950 301 27.2 5.1 6.1 chr1 63676998 63677095 (185573526) + MamGypLTR2b LTR/Gypsy 156 252 (670) 118081 295 22.9 7.0 3.5 chr1 63677257 63677342 (185573279) + MamGypLTR2b LTR/Gypsy 666 754 (168) 118081 274 24.3 12.8 3.4 chr1 64422542 64422687 (184827934) C LTR81A LTR/Gypsy (0) 1393 1229 119438 345 31.9 10.3 2.8 chr1 64918063 64918439 (184332182) C MamGypLTR2c LTR/Gypsy (16) 1137 681 120315 229 34.5 6.9 5.6 chr1 64918850 64919082 (184331539) C MamGypLTR2c LTR/Gypsy (774) 379 144 120315 712 25.8 3.7 13.8 chr1 65476710 65476876 (183773745) + LTR81B LTR/Gypsy 13 163 (1187) 121298 763 26.1 4.8 10.5 chr1 65477151 65477467 (183773154) + LTR81B LTR/Gypsy 160 453 (940) 121298 250 29.7 1.9 2.9 chr1 65978484 65978587 (183272034) + MamGypLTR2b LTR/Gypsy 807 909 (13) 122284 320 28.9 1.9 2.8 chr1 66380401 66380507 (182870114) C LTR81A LTR/Gypsy (1197) 153 48 122805 1069 30.9 7.1 3.3 chr1 66599049 66599500 (182651121) C MamGypLTR1d LTR/Gypsy (9) 804 336 123113 385 28.5 2.4 2.4 chr1 66599583 66599708 (182650913) C MamGypLTR1d LTR/Gypsy (662) 141 16 123113 395 29.8 21.3 4.9 chr1 67276461 67277125 (181973496) C MamGypLTR1d LTR/Gypsy (3) 810 8 124128 625 31.9 14.6 2.1 chr1 67458819 67459233 (181791388) + MamGypLTR1b LTR/Gypsy 266 746 (36) 124409 598 29.0 6.9 6.1 chr1 67484504 67484749 (181765872) + MamGypLTR3 LTR/Gypsy 481 728 (111) 124448 438 25.2 2.2 4.4 chr1 68070929 68071065 (181179556) C MamGypLTR1a LTR/Gypsy (11) 773 640 125543 475 27.5 5.0 4.5 chr1 68071352 68071530 (181179091) C MamGypLTR1a LTR/Gypsy (555) 229 50 125543 276 27.1 9.0 6.7 chr1 68075704 68075881 (181174740) + MamGypLTR1d LTR/Gypsy 91 272 (531) 125555 387 32.4 5.1 5.9 chr1 68076223 68076458 (181174163) + MamGypLTR1d LTR/Gypsy 537 770 (43) 125555 357 31.4 6.4 5.3 chr1 68104220 68104485 (181146136) + LTR81A LTR/Gypsy 1067 1335 (15) 125610 457 30.6 7.4 1.8 chr1 68323995 68324157 (180926464) + MamGypLTR3 LTR/Gypsy 667 838 (1) 126000 295 26.6 9.2 1.5 chr1 69116422 69116551 (180134070) C MamGypLTR2b LTR/Gypsy (10) 912 773 127245 240 33.7 2.9 1.0 chr1 69116817 69116918 (180133703) C MamGypLTR2b LTR/Gypsy (539) 529 426 127245 389 26.7 1.9 0.0 chr1 69206373 69206477 (180044144) C MamGypLTR2c LTR/Gypsy (960) 108 2 127372 260 25.8 5.4 4.3 chr1 69260900 69260992 (179989629) C MamGypLTR2c LTR/Gypsy (9) 1059 966 127444 371 28.7 8.5 0.8 chr1 69261742 69261871 (179988750) C MamGypLTR2c LTR/Gypsy (568) 500 361 127444 245 15.9 2.3 0.0 chr1 69981425 69981468 (179269153) C LTR81AB LTR/Gypsy (111) 167 123 128398 225 28.7 2.8 4.7 chr1 70054448 70054553 (179196068) C MamGypLTR2c LTR/Gypsy (2) 1066 963 128497 522 34.2 13.3 5.8 chr1 70054873 70055595 (179195026) C MamGypLTR2c LTR/Gypsy (287) 781 5 128497 237 29.1 3.7 3.7 chr1 70055591 70055697 (179194924) C LTR81AB LTR/Gypsy (52) 226 120 128500 475 29.8 10.1 4.7 chr1 70398198 70398586 (178852035) C LTR81B LTR/Gypsy (20) 1373 925 128975 276 31.4 9.9 10.2 chr1 71020311 71020594 (178230027) C MamGypLTR1c LTR/Gypsy (2) 801 519 129985 625 32.8 16.4 4.4 chr1 71023413 71024076 (178226545) + MamGypLTR1c LTR/Gypsy 4 747 (56) 129987 642 25.6 4.7 9.0 chr1 71024359 71024767 (178225854) C MamGypLTR2c LTR/Gypsy (19) 1049 538 129990 253 29.4 9.8 4.8 chr1 71246193 71246522 (178004099) + LTR81A LTR/Gypsy 126 474 (876) 130290 327 32.1 9.1 2.5 chr1 71338325 71338596 (177912025) C MamGypLTR1a LTR/Gypsy (0) 803 509 130417 355 26.5 4.9 5.4 chr1 71452334 71452526 (177798095) + LTR81 LTR/Gypsy 858 1169 (181) 130572 972 31.8 15.0 3.9 chr1 71700681 71701266 (177549355) + MamGypLTR1a LTR/Gypsy 153 803 (0) 130911 1429 32.1 6.7 5.2 chr1 71739477 71740238 (177510383) + MamGypLTR1a LTR/Gypsy 10 782 (2) 130973 480 27.9 7.5 1.1 chr1 72578891 72579064 (176671557) + MamGypLTR1d LTR/Gypsy 605 789 (24) 132155 226 26.6 3.8 0.0 chr1 73209915 73209993 (176040628) + MamGypLTR2b LTR/Gypsy 712 793 (129) 132970 593 35.4 12.8 4.7 chr1 73423995 73424632 (175825989) + LTR81A LTR/Gypsy 657 1346 (4) 133230 301 29.9 2.5 0.8 chr1 73768453 73768570 (175482051) + MamGypLTR2b LTR/Gypsy 723 842 (80) 133615 270 31.5 5.5 1.4 chr1 73939808 73939952 (175310669) C MamGypLTR2b LTR/Gypsy (0) 922 772 133857 399 38.7 7.1 5.4 chr1 74249188 74249539 (175001082) + MamGyp-int LTR/Gypsy 940 1297 (3765) 134222 241 24.6 11.3 5.3 chr1 74295778 74295910 (174954711) + LTR81B LTR/Gypsy 165 305 (1088) 134285 371 32.5 3.4 0.8 chr1 74699430 74699547 (174551074) + MamGypLTR2c LTR/Gypsy 291 411 (657) 134803 305 29.0 6.7 3.0 chr1 75319166 75319300 (173931321) + LTR81A LTR/Gypsy 44 183 (1167) 135690 261 37.4 6.2 1.2 chr1 75339718 75339877 (173910744) + MamGypLTR1c LTR/Gypsy 231 398 (405) 135710 352 30.5 2.8 6.1 chr1 76090833 76091091 (173159530) C LTR81AB LTR/Gypsy (964) 386 128 136643 514 22.7 4.2 1.4 chr1 76740997 76741139 (172509482) C MamGypLTR1c LTR/Gypsy (0) 803 657 137639 290 32.6 4.1 4.1 chr1 76744199 76744393 (172506228) C MamGypLTR1a LTR/Gypsy (589) 195 1 137645 608 30.5 4.8 5.5 chr1 77031195 77031593 (172219028) C LTR81B LTR/Gypsy (997) 396 1 138037 232 26.2 1.2 7.0 chr1 77167958 77168043 (172082578) + LTR81B LTR/Gypsy 1247 1327 (66) 138223 340 24.2 3.2 3.1 chr1 77238391 77238545 (172012076) C LTR81B LTR/Gypsy (1136) 214 62 138319 348 30.1 8.0 2.7 chr1 77282230 77282379 (171968242) C MamGypLTR1c LTR/Gypsy (308) 495 338 138390 865 19.9 3.8 3.8 chr1 77726496 77726735 (171523886) + MamGypLTR2b LTR/Gypsy 683 922 (0) 138979 279 29.5 6.9 6.4 chr1 77765213 77765400 (171485221) C MamGypLTR3 LTR/Gypsy (113) 726 538 139029 400 19.8 3.7 1.2 chr1 77779613 77779694 (171470927) C MamGypLTR1d LTR/Gypsy (676) 137 54 139051 432 33.6 3.9 4.6 chr1 77919552 77919810 (171330811) C MamGypLTR1b LTR/Gypsy (53) 729 473 139283 674 33.2 8.4 1.3 chr1 78236124 78236431 (171014190) + MamGyp-int LTR/Gypsy 2338 2667 (2395) 139855 496 27.8 5.9 0.7 chr1 78243374 78243525 (171007096) + MamGyp-int LTR/Gypsy 3845 4004 (1058) 139871 316 23.2 0.9 5.7 chr1 78243644 78243748 (171006873) + MamGypLTR1a LTR/Gypsy 644 743 (41) 139872 325 25.7 0.9 5.6 chr1 78647913 78648019 (170602602) + LTR81C LTR/Gypsy 827 928 (225) 140599 475 32.3 4.0 6.4 chr1 78692067 78692440 (170558181) C MamGypLTR2b LTR/Gypsy (10) 912 548 140651 480 30.4 2.4 4.2 chr1 78812487 78812651 (170437970) C MamGypLTR3 LTR/Gypsy (456) 383 222 140820 231 23.3 0.0 0.0 chr1 78814541 78814583 (170436038) C MamGypLTR3 LTR/Gypsy (682) 157 115 140820 608 29.2 9.0 4.6 chr1 79169287 79169609 (170081012) C MamGypLTR2b LTR/Gypsy (3) 919 583 141278 270 29.8 14.1 5.7 chr1 79169872 79170063 (170080558) C MamGypLTR2b LTR/Gypsy (694) 228 21 141278 654 24.1 2.8 7.3 chr1 79757759 79758136 (169492485) + LTR81A LTR/Gypsy 14 372 (978) 142045 484 27.8 8.6 1.8 chr1 79758580 79758799 (169491822) + LTR81A LTR/Gypsy 884 1118 (35) 142045 433 25.2 5.6 5.6 chr1 80515221 80515434 (168735187) C LTR81B LTR/Gypsy (1067) 326 113 143067 225 22.8 3.6 4.8 chr1 80515479 80515561 (168735060) C LTR81B LTR/Gypsy (1242) 108 27 143067 270 29.8 2.8 5.5 chr1 80773660 80773840 (168476781) C MamGypLTR2b LTR/Gypsy (56) 866 691 143404 226 30.9 0.0 1.4 chr1 80952168 80952236 (168298385) + LTR81A LTR/Gypsy 156 223 (1127) 143641 794 34.7 10.5 6.0 chr1 81113227 81113986 (168136635) C MamGypLTR1c LTR/Gypsy (4) 799 6 143855 374 33.3 6.0 4.9 chr1 81224982 81225265 (168025356) C MamGypLTR1a LTR/Gypsy (41) 743 457 143966 397 27.8 14.0 11.1 chr1 81569377 81569461 (167681160) C MamGypLTR2c LTR/Gypsy (0) 1068 1004 144427 397 27.8 14.0 11.1 chr1 81569580 81569906 (167680715) C MamGypLTR2c LTR/Gypsy (65) 1003 644 144427 340 33.1 18.4 0.0 chr1 82012204 82012572 (167238049) C LTR81B LTR/Gypsy (10) 1383 947 145011 851 23.3 2.6 4.2 chr1 82013283 82013546 (167237075) C LTR81AB LTR/Gypsy (1) 277 18 145012 297 22.8 9.9 5.8 chr1 82523768 82523888 (166726733) + MamGypLTR2c LTR/Gypsy 857 982 (86) 145746 474 22.8 21.0 8.1 chr1 82649578 82649825 (166600796) + LTR81B LTR/Gypsy 1097 1376 (17) 145919 391 34.9 3.7 8.3 chr1 83001556 83001905 (166248716) C MamGypLTR1a LTR/Gypsy (30) 754 421 146378 432 34.3 6.8 3.6 chr1 83953025 83953305 (165297316) C MamGypLTR3 LTR/Gypsy (83) 756 467 147625 277 26.1 8.6 1.1 chr1 83953321 83953413 (165297208) C MamGypLTR3 LTR/Gypsy (446) 393 294 147625 1004 29.7 13.2 5.4 chr1 83953515 83954239 (165296382) C MamGypLTR1c LTR/Gypsy (5) 798 17 147626 239 22.9 4.7 3.5 chr1 84181434 84181519 (165069102) + LTR81A LTR/Gypsy 227 313 (1037) 147914 547 25.9 8.9 6.9 chr1 84182604 84182952 (165067669) + LTR81A LTR/Gypsy 980 1335 (15) 147914 459 17.2 0.9 1.6 chr1 84216570 84216682 (165033939) C LTR81A LTR/Gypsy (29) 1321 1236 147968 413 22.2 3.4 0.0 chr1 84217671 84217787 (165032834) C LTR81A LTR/Gypsy (157) 121 1 147968 497 34.0 4.6 2.0 chr1 84263440 84263745 (164986876) + MamGypLTR2b LTR/Gypsy 609 922 (0) 148022 241 23.5 0.0 14.7 chr1 84316361 84316455 (164934166) + MamGypLTR2c LTR/Gypsy 21 101 (967) 148102 282 26.7 3.8 1.5 chr1 84474073 84474209 (164776412) C MamGypLTR1c LTR/Gypsy (49) 873 607 148334 226 30.5 1.2 4.7 chr1 84501367 84501452 (164749169) C MamGypLTR2c LTR/Gypsy (982) 86 4 148374 450 34.9 5.6 6.5 chr1 84621456 84621676 (164628945) C MamGypLTR3 LTR/Gypsy (2) 837 614 148537 450 34.9 5.6 6.5 chr1 84621964 84622155 (164628466) C MamGypLTR3 LTR/Gypsy (226) 613 428 148537 480 27.2 8.1 4.5 chr1 84718085 84718395 (164532226) C LTR81B LTR/Gypsy (0) 1393 826 148649 652 26.8 7.0 10.9 chr1 84922654 84923055 (164327566) + MamGypLTR1c LTR/Gypsy 65 450 (353) 148934 349 34.4 6.0 6.6 chr1 85184409 85184710 (164065911) C MamGypLTR1c LTR/Gypsy (11) 792 493 149359 437 29.9 9.9 7.8 chr1 85365111 85365264 (163885357) + MamGypLTR2b LTR/Gypsy 667 826 (96) 149663 437 29.9 9.9 7.8 chr1 85365573 85365660 (163884961) + MamGypLTR2b LTR/Gypsy 827 914 (8) 149663 359 22.7 2.0 4.9 chr1 85845956 85846057 (163404564) C MamGypLTR2b LTR/Gypsy (132) 790 692 150443 615 32.4 12.3 7.9 chr1 86285255 86285519 (162965102) + MamGypLTR2c LTR/Gypsy 12 269 (799) 151126 615 32.4 12.3 7.9 chr1 86285831 86286044 (162964577) + MamGypLTR2c LTR/Gypsy 270 512 (556) 151126 331 28.2 6.1 11.3 chr1 86322531 86322742 (162927879) + LTR81B LTR/Gypsy 257 457 (936) 151164 402 22.4 12.3 13.9 chr1 86323316 86323616 (162927005) + LTR81B LTR/Gypsy 1098 1393 (0) 151164 310 30.2 10.4 6.9 chr1 86429007 86429237 (162821384) + MamGypLTR1b LTR/Gypsy 1 239 (543) 151302 289 34.6 2.2 0.7 chr1 86431196 86431332 (162819289) + MamGypLTR1b LTR/Gypsy 202 340 (444) 151302 303 29.1 2.5 5.7 chr1 86953151 86953307 (162297314) C LTR81C LTR/Gypsy (263) 890 739 151986 231 34.7 4.0 3.3 chr1 87217148 87217299 (162033322) C MamGypLTR3 LTR/Gypsy (453) 386 234 152342 838 19.6 11.2 2.2 chr1 87711919 87712142 (161538479) C LTR81A LTR/Gypsy (0) 1350 1107 153103 300 30.0 2.2 15.0 chr1 87713352 87713618 (161537003) C LTR81C LTR/Gypsy (920) 233 1 153105 942 31.9 10.0 6.4 chr1 87749874 87750636 (161499985) + MamGypLTR3 LTR/Gypsy 50 839 (0) 153148 360 30.2 2.3 0.8 chr1 88087672 88087801 (161162820) C MamGypLTR3 LTR/Gypsy (54) 785 654 153588 281 28.8 2.8 13.8 chr1 88240233 88240377 (161010244) + MamGypLTR1a LTR/Gypsy 593 721 (63) 153815 546 22.9 6.1 8.3 chr1 88299877 88300057 (160950564) + LTR81A LTR/Gypsy 69 245 (1105) 153898 395 31.8 10.3 3.2 chr1 88301177 88301517 (160949104) + LTR81C LTR/Gypsy 754 1118 (35) 153900 264 29.9 17.5 2.6 chr1 90879701 90879889 (158370732) C MamGypLTR1c LTR/Gypsy (19) 784 568 157450 233 24.2 0.0 7.0 chr1 91219769 91219839 (158030782) C MamGypLTR2c LTR/Gypsy (665) 403 338 157884 390 21.1 24.4 0.0 chr1 91707132 91707254 (157543367) C MamGypLTR1c LTR/Gypsy (2) 801 649 158596 300 32.5 3.3 2.5 chr1 91708764 91708883 (157541738) C MamGypLTR2b LTR/Gypsy (778) 144 24 158599 293 29.4 2.8 0.0 chr1 91938720 91938828 (157311793) + MamGypLTR1c LTR/Gypsy 106 217 (586) 158884 457 28.6 8.4 3.0 chr1 91939321 91939583 (157311038) + MamGypLTR1c LTR/Gypsy 527 803 (0) 158884 273 33.9 4.2 5.1 chr1 91944359 91944476 (157306145) + MamGypLTR1d LTR/Gypsy 470 586 (227) 158897 851 34.9 10.1 5.4 chr1 92019762 92020086 (157230535) C MamGypLTR3 LTR/Gypsy (0) 839 482 159022 851 34.9 10.1 5.4 chr1 92020469 92020884 (157229737) C MamGypLTR3 LTR/Gypsy (358) 481 63 159022 314 19.1 3.0 0.0 chr1 92358069 92358151 (156892470) C MamGypLTR1d LTR/Gypsy (11) 802 707 159530 511 34.1 1.1 1.1 chr1 94823134 94823317 (154427304) C MamGypLTR3 LTR/Gypsy (17) 822 639 163719 376 34.7 3.2 1.4 chr1 94823394 94823609 (154427012) C MamGypLTR3 LTR/Gypsy (305) 534 315 163719 546 26.6 4.1 9.0 chr1 94823886 94824129 (154426492) C MamGypLTR3 LTR/Gypsy (599) 240 9 163719 254 29.6 5.1 2.5 chr1 94989742 94989859 (154260762) + MamGypLTR1c LTR/Gypsy 24 144 (659) 163967 240 29.1 3.5 4.3 chr1 95245001 95245115 (154005506) + MamGypLTR3 LTR/Gypsy 711 824 (15) 164320 251 29.3 5.0 1.0 chr1 95249873 95249972 (154000649) + MamGypLTR1a LTR/Gypsy 32 135 (649) 164331 226 17.5 0.0 0.0 chr1 95256689 95256728 (153993893) + MamGypLTR1d LTR/Gypsy 766 805 (8) 164341 380 28.1 13.6 1.3 chr1 95342270 95342424 (153908197) C MamGypLTR1d LTR/Gypsy (9) 804 631 164464 255 29.2 0.0 3.0 chr1 95342493 95342559 (153908062) C MamGypLTR1d LTR/Gypsy (323) 490 426 164464 610 24.3 5.7 14.4 chr1 95342657 95343059 (153907562) C MamGypLTR1d LTR/Gypsy (406) 407 40 164464 443 30.6 16.2 3.3 chr1 96104408 96104796 (153145825) + MamGypLTR1a LTR/Gypsy 346 784 (0) 165625 361 26.0 21.7 3.1 chr1 96759208 96759465 (152491156) + MamGypLTR1d LTR/Gypsy 5 310 (503) 166436 671 35.9 8.7 2.1 chr1 96825039 96825519 (152425102) + MamGypLTR1b LTR/Gypsy 264 776 (6) 166531 286 37.5 6.6 1.9 chr1 96830357 96830614 (152420007) C MamGypLTR1b LTR/Gypsy (44) 738 469 166541 266 26.7 11.8 5.5 chr1 96830871 96830997 (152419624) C MamGypLTR1b LTR/Gypsy (646) 136 2 166542 313 32.2 1.1 1.4 chr1 97039579 97039721 (152210900) + MamGypLTR1c LTR/Gypsy 643 792 (11) 166835 243 33.1 10.2 0.8 chr1 97083632 97083759 (152166862) + LTR81C LTR/Gypsy 836 975 (178) 166888 721 36.4 3.0 5.4 chr1 97083784 97084155 (152166466) C LTR81 LTR/Gypsy (388) 801 439 166889 436 33.2 13.4 2.6 chr1 97085116 97085531 (152165090) C LTR81 LTR/Gypsy (932) 461 1 166889 286 11.9 14.7 1.5 chr1 97301165 97301232 (151949389) + MamGypLTR2b LTR/Gypsy 843 919 (3) 167213 335 22.4 11.0 1.6 chr1 97310213 97310339 (151940282) + MamGypLTR1c LTR/Gypsy 658 796 (7) 167224 379 26.4 2.7 0.9 chr1 97439095 97439205 (151811416) C LTR81C LTR/Gypsy (1) 1152 1040 167394 514 34.9 7.8 6.3 chr1 97439264 97439670 (151810951) C LTR81 LTR/Gypsy (682) 507 103 167395 514 34.9 7.8 6.3 chr1 97440101 97440181 (151810440) C LTR81 LTR/Gypsy (1087) 102 12 167395 771 32.3 6.4 5.8 chr1 97468611 97469109 (151781512) + LTR81B LTR/Gypsy 176 677 (716) 167438 510 31.1 18.4 5.8 chr1 97469181 97469601 (151781020) + LTR81B LTR/Gypsy 808 1294 (99) 167438 257 22.9 2.8 1.4 chr1 98342986 98343056 (150907565) + MamGypLTR1d LTR/Gypsy 710 791 (22) 168608 279 34.5 6.4 6.7 chr1 98402445 98402711 (150847910) C MamGypLTR1c LTR/Gypsy (25) 778 513 168690 426 35.3 4.8 5.6 chr1 98718939 98719334 (150531287) C MamGypLTR2c LTR/Gypsy (600) 468 76 169099 512 24.8 12.2 3.7 chr1 98741582 98741795 (150508826) + LTR81B LTR/Gypsy 1118 1349 (44) 169137 376 29.2 7.7 4.6 chr1 98888169 98888362 (150362259) + LTR81B LTR/Gypsy 1200 1393 (0) 169357 376 16.8 9.5 2.4 chr1 98955396 98955537 (150295084) C LTR81B LTR/Gypsy (1093) 257 104 169463 334 31.3 5.8 5.8 chr1 99374169 99374375 (149876246) + MamGypLTR1a LTR/Gypsy 270 476 (308) 170059 296 25.7 9.7 5.6 chr1 99392664 99392847 (149857774) C LTR81C LTR/Gypsy (6) 1183 960 170089 324 26.6 15.8 8.2 chr1 99531501 99531791 (149718830) + LTR81B LTR/Gypsy 1039 1351 (42) 170305 230 17.5 0.0 2.4 chr1 99681240 99681280 (149569341) C MamGypLTR1c LTR/Gypsy (630) 173 134 170525 547 32.1 4.3 1.3 chr1 99895906 99896146 (149354475) C MamGypLTR1d LTR/Gypsy (25) 788 534 170801 247 29.8 5.1 4.1 chr1 99896281 99896378 (149354243) C MamGypLTR1d LTR/Gypsy (317) 486 388 170801 273 24.1 8.9 3.3 chr1 99901961 99902050 (149348571) + MamGypLTR2b LTR/Gypsy 802 896 (26) 170812 764 30.1 12.7 6.7 chr1 99939273 99939990 (149310631) C MamGypLTR1a LTR/Gypsy (3) 781 21 170861 356 36.2 6.1 6.8 chr1 100062716 100063041 (149187580) + MamGypLTR2b LTR/Gypsy 10 333 (589) 171036 557 30.8 7.2 6.2 chr1 100084905 100085209 (149165412) C MamGypLTR3 LTR/Gypsy (33) 806 499 171072 728 23.9 9.7 2.6 chr1 100306897 100307124 (148943497) + LTR81B LTR/Gypsy 1 244 (1149) 171424 373 31.8 13.0 3.3 chr1 100307859 100308121 (148942500) + LTR81B LTR/Gypsy 1034 1306 (44) 171426 258 32.4 1.8 0.9 chr1 101215097 101215208 (148035413) + LTR81C LTR/Gypsy 139 251 (1099) 172961 423 30.9 11.5 4.0 chr1 101215330 101215582 (148035039) + LTR81C LTR/Gypsy 211 482 (671) 172961 351 38.2 5.9 0.0 chr1 101215565 101215716 (148034905) + LTR81C LTR/Gypsy 777 937 (413) 172961 261 25.9 6.2 9.2 chr1 101258570 101258720 (147991901) + MamGypLTR1c LTR/Gypsy 280 424 (389) 173016 274 38.0 4.7 0.5 chr1 101316677 101316869 (147933752) + MamGypLTR2b LTR/Gypsy 722 922 (0) 173079 267 25.7 12.9 3.1 chr1 101806839 101806946 (147443675) + MamGypLTR1b LTR/Gypsy 603 722 (62) 173874 477 31.3 5.9 4.1 chr1 101919077 101919401 (147331220) + MamGypLTR2b LTR/Gypsy 13 362 (706) 174021 300 31.9 10.2 6.2 chr1 101919601 101919844 (147330777) + MamGypLTR1c LTR/Gypsy 524 777 (26) 174022 305 26.9 1.8 11.0 chr1 102096477 102096502 (147154119) + MamGypLTR1a LTR/Gypsy 1 26 (758) 174238 305 27.3 2.0 10.2 chr1 102096892 102097058 (147153563) + MamGypLTR1a LTR/Gypsy 27 186 (617) 174238 522 28.3 6.3 12.2 chr1 102097129 102097617 (147153004) + MamGypLTR1a LTR/Gypsy 323 813 (0) 174238 261 32.5 14.8 3.1 chr1 102148188 102148349 (147102272) + MamGypLTR3 LTR/Gypsy 576 756 (83) 174312 234 27.0 12.9 1.0 chr1 102173980 102174080 (147076541) C MamGypLTR2b LTR/Gypsy (171) 751 639 174355 256 25.3 9.4 1.0 chr1 102174794 102174889 (147075732) C LTR81B LTR/Gypsy (1203) 190 87 174356 231 33.3 2.3 2.3 chr1 103742292 103742377 (145508244) + LTR81C LTR/Gypsy 506 591 (562) 176365 255 30.4 2.9 0.0 chr1 103826815 103826916 (145423705) C MamGypLTR1a LTR/Gypsy (48) 736 632 176489 746 36.7 3.8 3.6 chr1 103827431 103827877 (145422744) C MamGyp-int LTR/Gypsy (3762) 1300 853 176490 339 30.5 2.6 0.7 chr1 103858160 103858314 (145392307) C MamGypLTR2b LTR/Gypsy (0) 922 765 176538 255 30.4 2.9 0.0 chr1 103966547 103966648 (145283973) C MamGypLTR1a LTR/Gypsy (48) 736 632 176610 746 36.7 3.8 3.6 chr1 103967163 103967609 (145283012) C MamGyp-int LTR/Gypsy (3762) 1300 853 176611 339 30.5 2.6 0.7 chr1 103997892 103998046 (145252575) C MamGypLTR2b LTR/Gypsy (0) 922 765 176659 405 36.8 3.8 5.5 chr1 105450944 105451179 (143799442) + LTR81 LTR/Gypsy 721 952 (237) 178458 504 26.8 10.5 1.0 chr1 107115114 107115313 (142135308) + MamGypLTR1d LTR/Gypsy 3 221 (592) 180599 321 27.2 1.9 1.9 chr1 107296994 107297098 (141953523) + LTR81A LTR/Gypsy 183 287 (1063) 180826 226 28.8 4.9 1.2 chr1 107393177 107393257 (141857364) C LTR81B LTR/Gypsy (220) 1130 1047 180960 242 28.2 2.3 1.2 chr1 107393893 107393978 (141856643) C LTR81B LTR/Gypsy (1069) 324 238 180960 240 8.1 2.7 0.0 chr1 107910908 107910944 (141339677) C MamGypLTR1c LTR/Gypsy (29) 774 737 181712 267 31.1 6.7 7.2 chr1 108545645 108545681 (140704940) + LTR81B LTR/Gypsy 247 274 (1119) 182527 267 31.1 6.7 7.2 chr1 108545989 108546144 (140704477) + LTR81B LTR/Gypsy 275 439 (954) 182527 274 33.5 8.9 4.2 chr1 108586398 108586565 (140664056) C LTR81B LTR/Gypsy (218) 971 796 182591 425 29.9 14.2 6.3 chr1 108587062 108587379 (140663242) C LTR81B LTR/Gypsy (914) 479 137 182591 2248 32.1 8.1 3.3 chr1 108628704 108629318 (140621303) + MamGyp-int LTR/Gypsy 1597 2266 (2796) 182647 2248 32.1 8.1 3.3 chr1 108629451 108630078 (140620543) + MamGyp-int LTR/Gypsy 2267 2899 (2163) 182647 864 28.7 7.1 0.6 chr1 108672124 108672446 (140578175) + MamGypLTR1a LTR/Gypsy 1 344 (440) 182727 440 26.8 9.1 2.3 chr1 108672464 108672639 (140577982) + MamGypLTR1a LTR/Gypsy 405 592 (192) 182727 383 24.3 8.6 2.2 chr1 110052632 110052770 (139197851) C MamGypLTR1b LTR/Gypsy (11) 771 624 184973 259 33.3 4.9 0.0 chr1 110332474 110332575 (138918046) + MamGypLTR3 LTR/Gypsy 192 298 (541) 185338 300 35.8 1.7 8.1 chr1 110332728 110332961 (138917660) + MamGypLTR3 LTR/Gypsy 595 813 (26) 185338 240 30.3 8.1 1.6 chr1 110519079 110519202 (138731419) + MamGypLTR1b LTR/Gypsy 631 762 (20) 185611 790 31.2 11.2 1.7 chr1 110667919 110668329 (138582292) + MamGypLTR1b LTR/Gypsy 327 776 (6) 185810 308 28.1 1.2 0.0 chr1 111020027 111020108 (138230513) C MamGypLTR1c LTR/Gypsy (19) 784 702 186407 488 30.0 6.5 1.0 chr1 111020356 111020748 (138229873) C MamGypLTR1c LTR/Gypsy (308) 505 4 186407 453 27.8 9.7 1.5 chr1 111785294 111785532 (137465089) C MamGypLTR1b LTR/Gypsy (43) 741 462 187418 256 28.3 15.8 2.0 chr1 111955803 111955903 (137294718) + MamGyp-int LTR/Gypsy 4585 4699 (363) 187601 797 23.2 11.2 1.6 chr1 112143330 112143587 (137107034) + LTR81B LTR/Gypsy 1108 1390 (3) 187892 236 32.4 0.9 2.7 chr1 112894638 112894748 (136355873) C LTR81A LTR/Gypsy (9) 1384 1276 189009 1404 30.7 19.1 4.3 chr1 112896391 112896948 (136353673) C LTR81A LTR/Gypsy (185) 1165 508 189009 1404 26.2 13.5 6.0 chr1 112897261 112897606 (136353015) C LTR81A LTR/Gypsy (843) 507 133 189009 723 19.4 4.9 2.4 chr1 113589131 113589294 (135661327) C MamGypLTR3 LTR/Gypsy (0) 839 672 190382 390 23.4 4.1 2.8 chr1 113907522 113907666 (135342955) + MamGypLTR1a LTR/Gypsy 1 147 (637) 190933 366 32.2 7.5 1.8 chr1 113907796 113908028 (135342593) + MamGypLTR1a LTR/Gypsy 474 719 (63) 190933 792 21.9 2.5 5.1 chr1 114597680 114597915 (134652706) C LTR81B LTR/Gypsy (1163) 230 1 192010 1070 30.2 11.3 6.4 chr1 114738467 114739199 (134511422) + MamGypLTR1b LTR/Gypsy 12 780 (2) 192188 510 25.2 6.5 10.3 chr1 115064891 115065151 (134185470) + MamGypLTR3 LTR/Gypsy 589 839 (0) 192719 622 28.1 11.4 2.8 chr1 115341112 115341400 (133909221) + LTR81 LTR/Gypsy 876 1189 (0) 193217 317 33.7 10.7 1.4 chr1 115887633 115887914 (133362707) C LTR81 LTR/Gypsy (641) 548 241 193975 729 25.8 7.2 4.9 chr1 115887923 115888187 (133362434) C LTR81A LTR/Gypsy (1039) 311 41 193976 256 20.0 0.0 2.0 chr1 116248577 116248627 (133001994) + MamGypLTR2c LTR/Gypsy 52 101 (967) 194493 436 25.7 10.2 2.8 chr1 116249071 116249286 (133001335) + MamGypLTR1c LTR/Gypsy 564 795 (8) 194495 280 28.8 5.0 0.8 chr1 116499012 116499130 (132751491) C MamGypLTR1d LTR/Gypsy (39) 774 651 194887 602 23.6 2.7 1.3 chr1 117051666 117051815 (132198806) C MamGypLTR1d LTR/Gypsy (4) 809 658 195717 379 26.1 2.7 0.9 chr1 117404118 117404229 (131846392) + MamGypLTR3 LTR/Gypsy 286 399 (440) 196268 476 30.5 9.2 2.1 chr1 117567183 117567420 (131683201) C LTR81B LTR/Gypsy (51) 1342 1088 196502 1090 26.2 6.1 0.7 chr1 117877462 117877757 (131372864) + MamGyp-int LTR/Gypsy 1 312 (4750) 197006 439 38.7 3.7 1.9 chr1 117878535 117878891 (131371730) + MamGyp-int LTR/Gypsy 711 1089 (3973) 197006 383 29.6 2.8 2.1 chr1 117879312 117879456 (131371165) + MamGyp-int LTR/Gypsy 1562 1707 (3355) 197006 341 33.5 6.2 6.7 chr1 117880120 117880201 (131370420) + MamGyp-int LTR/Gypsy 1730 1813 (3249) 197006 341 33.5 6.2 6.7 chr1 117880737 117880877 (131369744) + MamGyp-int LTR/Gypsy 1814 1952 (3110) 197006 862 30.6 9.0 4.2 chr1 117880953 117881376 (131369245) + MamGyp-int LTR/Gypsy 2070 2513 (2549) 197006 564 19.5 4.0 12.1 chr1 118109503 118109700 (131140921) + LTR81A LTR/Gypsy 39 223 (1127) 197342 228 26.4 3.9 7.7 chr1 118886367 118886444 (130364177) + LTR81C LTR/Gypsy 262 336 (817) 198451 251 22.8 9.2 9.2 chr1 119069014 119069100 (130181521) C MamGypLTR3 LTR/Gypsy (183) 656 570 198653 263 30.9 10.9 1.6 chr1 119870834 119870961 (129379660) + MamGypLTR3 LTR/Gypsy 670 809 (30) 199732 236 34.3 6.0 12.1 chr1 119881964 119882195 (129368426) + MamGypLTR2b LTR/Gypsy 16 233 (689) 199746 233 24.5 0.9 13.3 chr1 119882672 119882784 (129367837) + MamGypLTR2b LTR/Gypsy 693 791 (131) 199747 456 31.2 7.5 2.9 chr1 120327702 120327942 (128922679) C MamGyp-int LTR/Gypsy (4633) 429 178 200280 321 37.0 0.5 8.7 chr1 120350049 120350267 (128900354) + MamGypLTR2c LTR/Gypsy 304 504 (564) 200320 445 24.2 1.6 2.4 chr1 120867982 120868104 (128382517) + MamGypLTR1a LTR/Gypsy 1 122 (662) 200984 996 24.6 7.4 0.4 chr1 120868272 120868528 (128382093) + MamGypLTR1a LTR/Gypsy 510 784 (0) 200984 626 36.5 4.3 8.4 chr1 142587206 142587838 (106662783) + MamGypLTR1c LTR/Gypsy 10 616 (187) 201506 255 31.7 1.5 3.8 chr1 142588269 142588399 (106662222) + MamGypLTR1c LTR/Gypsy 634 761 (21) 201506 260 32.3 0.8 3.8 chr1 142921598 142921729 (106328892) C MamGypLTR1c LTR/Gypsy (21) 761 634 201840 573 34.6 7.0 10.8 chr1 142922159 142922797 (106327824) C MamGypLTR1c LTR/Gypsy (187) 616 2 201840 285 31.5 0.8 3.8 chr1 143498177 143498308 (105752313) C MamGypLTR1c LTR/Gypsy (21) 761 634 202310 616 36.3 3.7 7.0 chr1 143498800 143499371 (105751250) C MamGypLTR1c LTR/Gypsy (241) 562 10 202310 894 23.4 6.8 0.4 chr1 143883615 143883850 (105366771) C MamGypLTR1a LTR/Gypsy (24) 760 510 202618 432 22.5 1.6 2.4 chr1 143884018 143884140 (105366481) C MamGypLTR1a LTR/Gypsy (662) 122 1 202618 1094 34.2 11.6 1.4 chr1 144938228 144938805 (104311816) + MamGypLTR1a LTR/Gypsy 57 693 (91) 203707 992 24.6 7.4 0.4 chr1 149436993 149437249 (99813372) C MamGypLTR1a LTR/Gypsy (0) 784 510 209531 472 22.5 1.6 2.4 chr1 149437417 149437539 (99813082) C MamGypLTR1a LTR/Gypsy (662) 122 1 209531 453 31.4 5.6 7.5 chr1 150886489 150886756 (98363865) + MamGypLTR3 LTR/Gypsy 479 741 (98) 212239 232 25.7 5.3 2.6 chr1 151809726 151809801 (97440820) + MamGypLTR1d LTR/Gypsy 160 237 (576) 214020 388 36.7 3.6 5.1 chr1 152166264 152166516 (97084105) + MamGypLTR2b LTR/Gypsy 2 250 (672) 214578 383 32.7 8.7 5.7 chr1 152459028 152459394 (96791227) + LTR81C LTR/Gypsy 741 1118 (35) 214886 310 23.3 4.8 1.0 chr1 152869906 152870009 (96380612) + MamGypLTR2b LTR/Gypsy 773 880 (42) 215366 239 22.4 2.0 0.0 chr1 156433809 156433857 (92816764) C LTR81A LTR/Gypsy (83) 1267 1218 221824 736 30.7 15.5 8.6 chr1 156543649 156544358 (92706263) + MamGypLTR1c LTR/Gypsy 39 797 (6) 221990 249 36.7 7.7 3.4 chr1 157595568 157595920 (91654701) C LTR81C LTR/Gypsy (297) 856 489 223512 227 38.0 5.6 2.5 chr1 157797865 157798026 (91452595) + MamGypLTR1a LTR/Gypsy 242 408 (376) 223755 694 31.1 7.3 13.6 chr1 157820059 157820821 (91429800) C LTR81C LTR/Gypsy (14) 1139 425 223790 304 21.3 3.1 11.9 chr1 157843769 157843928 (91406693) C MamGypLTR2b LTR/Gypsy (25) 897 752 223829 527 25.3 4.0 2.3 chr1 158158455 158158628 (91091993) + MamGypLTR1c LTR/Gypsy 8 184 (619) 224304 406 37.4 2.8 1.4 chr1 158158618 158158831 (91091790) + MamGypLTR1c LTR/Gypsy 373 589 (224) 224304 240 21.7 6.8 5.7 chr1 158158872 158158959 (91091662) + MamGypLTR1c LTR/Gypsy 673 761 (52) 224304 288 13.4 0.8 4.5 chr1 158168365 158168446 (91082175) + LTR81A LTR/Gypsy 1259 1353 (40) 224317 643 32.0 10.9 3.7 chr1 158365514 158365918 (90884703) + MamGypLTR3 LTR/Gypsy 397 830 (9) 224515 341 26.8 3.5 7.6 chr1 159323259 159323456 (89927165) C MamGypLTR2b LTR/Gypsy (60) 862 673 225685 294 38.4 8.0 1.8 chr1 159331568 159331853 (89918768) C MamGypLTR3 LTR/Gypsy (370) 469 166 225692 490 25.5 14.6 3.2 chr1 159459923 159460169 (89790452) C LTR81B LTR/Gypsy (8) 1385 1111 225826 365 32.0 4.0 10.8 chr1 159462265 159462663 (89787958) C LTR81B LTR/Gypsy (960) 433 62 225832 612 30.6 2.6 5.3 chr1 159476849 159477114 (89773507) C MamGypLTR1c LTR/Gypsy (81) 722 464 225846 297 32.2 0.0 1.7 chr1 159529382 159529501 (89721120) + LTR81AB LTR/Gypsy 1 118 (160) 225898 1166 30.5 9.1 3.1 chr1 159655387 159655680 (89594941) + MamGypLTR1b LTR/Gypsy 68 420 (362) 226056 1166 31.2 8.5 2.0 chr1 159655909 159656248 (89594373) + MamGypLTR1b LTR/Gypsy 421 782 (0) 226056 579 32.5 4.2 5.5 chr1 161357339 161357647 (87892974) C LTR81A LTR/Gypsy (243) 1107 803 228748 232 28.5 12.3 3.9 chr1 161754315 161754493 (87496128) C MamGypLTR1b LTR/Gypsy (579) 203 10 229376 378 24.1 6.8 2.0 chr1 162462757 162462904 (86787717) + MamGypLTR1c LTR/Gypsy 46 200 (603) 230427 387 26.0 3.9 0.8 chr1 162466362 162466489 (86784132) + MamGypLTR1d LTR/Gypsy 682 813 (0) 230437 410 34.9 2.8 1.1 chr1 162712962 162713138 (86537483) C MamGypLTR1b LTR/Gypsy (142) 640 461 230899 310 27.2 11.2 6.0 chr1 162713267 162713481 (86537140) C MamGypLTR1b LTR/Gypsy (549) 235 10 230899 240 29.2 3.3 1.6 chr1 162891784 162891905 (86358716) + MamGypLTR2b LTR/Gypsy 799 922 (0) 231136 332 34.2 8.4 1.3 chr1 163148266 163148419 (86102202) + MamGypLTR1b LTR/Gypsy 361 525 (257) 231537 403 33.8 5.8 4.2 chr1 163230826 163231147 (86019474) C MamGypLTR1c LTR/Gypsy (3) 779 444 231669 501 37.5 5.8 3.8 chr1 163698182 163698527 (85552094) + MamGypLTR1a LTR/Gypsy 394 746 (38) 232327 570 33.5 4.4 4.0 chr1 164156544 164156915 (85093706) C MamGypLTR2c LTR/Gypsy (502) 566 55 232889 232 27.4 0.0 0.0 chr1 164389119 164389180 (84861441) C LTR81B LTR/Gypsy (1) 1392 1331 233176 277 17.4 0.0 14.8 chr1 164903129 164903229 (84347392) C MamGypLTR2b LTR/Gypsy (800) 122 37 233919 662 29.3 4.9 0.5 chr1 165018081 165018303 (84232318) C MamGypLTR1b LTR/Gypsy (2) 780 548 234094 271 15.6 15.6 0.0 chr1 165044295 165044358 (84206263) C MamGypLTR2b LTR/Gypsy (0) 922 849 234127 274 31.1 5.7 8.0 chr1 165044773 165044947 (84205674) C MamGypLTR2c LTR/Gypsy (669) 399 229 234128 640 27.9 7.5 11.6 chr1 165437848 165438260 (83812361) C MamGypLTR3 LTR/Gypsy (0) 839 444 234717 405 30.4 0.6 5.7 chr1 166024708 166024864 (83225757) + MamGypLTR3 LTR/Gypsy 657 805 (34) 235730 606 34.2 5.0 5.6 chr1 166417646 166417986 (82832635) C LTR81C LTR/Gypsy (776) 377 39 236240 582 32.9 7.9 6.7 chr1 166598437 166598840 (82651781) C MamGypLTR1b LTR/Gypsy (3) 779 371 236484 521 29.5 2.0 9.7 chr1 166598892 166599139 (82651482) C MamGypLTR1b LTR/Gypsy (555) 229 1 236484 474 25.6 9.0 7.6 chr1 167129593 167129622 (82120999) C MamGypLTR2c LTR/Gypsy (0) 1068 1046 237180 474 25.6 9.0 7.6 chr1 167129982 167130161 (82120460) C MamGypLTR2c LTR/Gypsy (23) 1045 855 237180 351 23.9 14.8 10.5 chr1 167131383 167131592 (82119029) C MamGypLTR2c LTR/Gypsy (558) 510 292 237180 456 21.8 6.1 2.5 chr1 167132550 167132692 (82117929) C MamGypLTR2c LTR/Gypsy (2) 276 6 237180 253 30.0 7.8 0.0 chr1 168118764 168118853 (81131768) + MamGypLTR1b LTR/Gypsy 29 125 (657) 238793 260 31.3 8.2 6.2 chr1 168119064 168119257 (81131364) + MamGypLTR1b LTR/Gypsy 526 723 (59) 238793 311 26.1 17.8 4.6 chr1 168264724 168264983 (80985638) C LTR81A LTR/Gypsy (0) 1350 1063 239043 252 18.4 4.1 0.0 chr1 168370733 168370781 (80879840) C LTR81B LTR/Gypsy (67) 1326 1276 239221 600 25.5 10.7 3.7 chr1 168372186 168372429 (80878192) C LTR81B LTR/Gypsy (1061) 332 72 239224 612 28.5 5.0 6.8 chr1 168418133 168418471 (80832150) + LTR81A LTR/Gypsy 1 333 (1017) 239294 243 30.1 5.4 0.0 chr1 168418515 168418607 (80832014) + LTR81C LTR/Gypsy 124 221 (932) 239295 245 30.0 5.0 6.8 chr1 168569199 168569238 (80681383) C MamGypLTR1d LTR/Gypsy (0) 813 774 239484 245 30.0 5.0 6.8 chr1 168569265 168569384 (80681237) C MamGypLTR1d LTR/Gypsy (40) 773 656 239484 355 24.2 13.6 7.5 chr1 168984108 168984335 (80266286) C MamGypLTR2b LTR/Gypsy (13) 909 668 240117 367 24.1 5.8 6.8 chr1 170187070 170187274 (79063347) + LTR81B LTR/Gypsy 89 291 (1102) 241826 823 34.5 5.1 7.8 chr1 170318433 170319035 (78931586) + MamGypLTR1b LTR/Gypsy 47 633 (149) 242022 327 33.3 5.8 3.6 chr1 170407115 170407338 (78843283) + MamGyp-int LTR/Gypsy 3905 4133 (929) 242108 357 36.0 9.3 3.6 chr1 170531753 170532173 (78718448) C MamGypLTR2b LTR/Gypsy (474) 448 4 242274 336 23.7 10.8 7.0 chr1 170532236 170532421 (78718200) C MamGypLTR1b LTR/Gypsy (589) 193 1 242275 891 33.8 9.8 4.1 chr1 170603988 170604735 (78645886) + MamGypLTR1d LTR/Gypsy 6 795 (18) 242351 559 32.6 6.4 2.4 chr1 170613833 170614241 (78636380) + LTR81A LTR/Gypsy 27 451 (899) 242371 369 24.6 10.2 5.1 chr1 170615749 170615945 (78634676) + LTR81C LTR/Gypsy 882 1088 (65) 242373 284 27.6 4.9 4.9 chr1 171602617 171602738 (77647883) + MamGypLTR2b LTR/Gypsy 158 279 (643) 243830 322 24.0 21.1 1.3 chr1 171603301 171603456 (77647165) + MamGypLTR2b LTR/Gypsy 682 868 (54) 243830 237 12.5 0.0 0.0 chr1 171603872 171603903 (77646718) + MamGypLTR2b LTR/Gypsy 884 915 (7) 243830 389 35.2 3.6 2.5 chr1 171874016 171874289 (77376332) + MamGypLTR1b LTR/Gypsy 497 773 (9) 244280 265 39.5 1.2 5.7 chr1 172656575 172656821 (76593800) + MamGypLTR2b LTR/Gypsy 84 319 (603) 245271 252 31.4 12.7 3.3 chr1 172734509 172734689 (76515932) C MamGypLTR3 LTR/Gypsy (118) 721 524 245374 512 24.9 16.7 3.8 chr1 172793118 172793380 (76457241) C LTR81B LTR/Gypsy (1021) 372 76 245430 424 29.4 9.3 3.9 chr1 172914108 172914387 (76336234) C MamGypLTR1c LTR/Gypsy (2) 801 507 245589 404 30.4 6.7 6.7 chr1 172914617 172914976 (76335645) C MamGypLTR1c LTR/Gypsy (399) 414 55 245589 352 31.6 4.5 1.5 chr1 173079156 173079349 (76171272) + LTR81C LTR/Gypsy 125 323 (830) 245792 924 31.9 7.1 4.6 chr1 173079443 173080007 (76170614) + LTR81C LTR/Gypsy 566 1144 (9) 245792 721 30.3 6.8 1.4 chr1 173473071 173473364 (75777257) + MamGypLTR1a LTR/Gypsy 300 609 (175) 246336 299 38.6 3.5 1.9 chr1 173518621 173518879 (75731742) + MamGyp-int LTR/Gypsy 2572 2834 (2228) 246408 277 25.9 12.5 12.1 chr1 173528229 173528492 (75722129) C LTR81A LTR/Gypsy (55) 1098 834 246424 546 32.0 4.3 1.9 chr1 173529067 173529324 (75721297) C LTR81A LTR/Gypsy (995) 355 92 246424 226 22.9 14.4 5.6 chr1 173531051 173531175 (75719446) + MamGypLTR2b LTR/Gypsy 745 880 (42) 246429 240 31.9 6.4 0.0 chr1 173641816 173641909 (75608712) + MamGypLTR1d LTR/Gypsy 403 502 (301) 246591 314 32.4 0.0 1.8 chr1 173641940 173642052 (75608569) + MamGypLTR1d LTR/Gypsy 481 591 (222) 246591 295 36.2 9.6 8.3 chr1 174465577 174466139 (74784482) + LTR81A LTR/Gypsy 767 1336 (14) 247937 227 25.0 2.8 10.3 chr1 175095172 175095226 (74155395) C MamGypLTR1c LTR/Gypsy (7) 796 752 248872 227 25.0 2.8 10.3 chr1 175095536 175095586 (74155035) C MamGypLTR1c LTR/Gypsy (52) 751 698 248872 250 28.8 5.4 0.9 chr1 175095936 175096047 (74154574) C MamGypLTR1c LTR/Gypsy (686) 117 1 248872 528 30.2 9.1 4.5 chr1 175189793 175189990 (74060631) + MamGypLTR1a LTR/Gypsy 177 383 (401) 249020 663 24.8 4.0 1.5 chr1 175190122 175190322 (74060299) + MamGypLTR1a LTR/Gypsy 569 774 (10) 249020 531 28.9 7.7 2.6 chr1 175195431 175195664 (74054957) C MamGypLTR3 LTR/Gypsy (59) 780 535 249035 302 25.2 6.0 8.0 chr1 175416537 175416687 (73833934) C MamGypLTR2c LTR/Gypsy (920) 148 1 249292 332 20.4 8.9 3.0 chr1 175551476 175551576 (73699045) + MamGypLTR2c LTR/Gypsy 34 140 (928) 249461 328 26.3 0.0 4.0 chr1 175857613 175857711 (73392910) C MamGypLTR1a LTR/Gypsy (43) 741 647 249918 310 29.9 2.0 1.0 chr1 175858114 175858211 (73392410) C MamGypLTR1a LTR/Gypsy (552) 232 134 249918 482 26.2 10.4 0.9 chr1 176219276 176219487 (73031134) C LTR81A LTR/Gypsy (45) 1305 1074 250463 469 27.6 2.6 2.1 chr1 176220321 176220509 (73030112) + LTR81C LTR/Gypsy 964 1153 (0) 250465 434 33.7 10.0 3.5 chr1 176221068 176221436 (73029185) + LTR81A LTR/Gypsy 271 663 (687) 250467 373 28.3 6.4 5.9 chr1 176232835 176233037 (73017584) + LTR81A LTR/Gypsy 1088 1291 (59) 250475 355 32.4 6.0 3.9 chr1 176497300 176497582 (72753039) + MamGypLTR1b LTR/Gypsy 494 782 (0) 250814 530 32.7 5.5 3.6 chr1 176652575 176652882 (72597739) C MamGypLTR1c LTR/Gypsy (7) 796 483 251030 471 32.1 3.6 3.2 chr1 177405624 177405871 (71844750) + MamGypLTR2c LTR/Gypsy 813 1061 (7) 252085 297 25.5 17.6 2.4 chr1 177455225 177455439 (71795182) + LTR81A LTR/Gypsy 67 313 (1080) 252147 255 33.6 7.8 2.8 chr1 177455946 177456086 (71794535) + MamGypLTR2b LTR/Gypsy 586 733 (189) 252148 475 23.6 9.5 9.0 chr1 177792006 177792208 (71458413) + MamGypLTR2c LTR/Gypsy 718 1068 (0) 252539 559 25.7 9.7 0.6 chr1 177895404 177895579 (71355042) C LTR81C LTR/Gypsy (0) 1153 962 252698 324 31.8 12.3 0.0 chr1 177895636 177895789 (71354832) C LTR81A LTR/Gypsy (298) 1052 880 252699 289 25.1 12.6 6.6 chr1 177895794 177895976 (71354645) C LTR81A LTR/Gypsy (650) 539 346 252699 279 27.6 16.3 6.5 chr1 178491053 178491346 (70759275) C MamGypLTR1a LTR/Gypsy (99) 685 363 253579 239 24.8 17.0 7.2 chr1 178491412 178491646 (70758975) C MamGypLTR1a LTR/Gypsy (523) 261 4 253579 358 29.4 8.0 6.6 chr1 178582776 178583063 (70667558) + MamGypLTR1b LTR/Gypsy 352 643 (139) 253719 608 29.9 12.1 9.1 chr1 178662552 178662803 (70587818) C MamGypLTR1a LTR/Gypsy (261) 523 241 253876 608 29.9 12.1 9.1 chr1 178662831 178663063 (70587558) C MamGypLTR1a LTR/Gypsy (544) 240 24 253876 271 30.4 4.2 2.8 chr1 178935337 178935478 (70315143) + MamGypLTR1a LTR/Gypsy 1 144 (638) 254299 324 29.1 14.5 2.6 chr1 178935631 178935782 (70314839) + MamGypLTR1a LTR/Gypsy 355 524 (258) 254299 334 21.4 1.0 13.4 chr1 178936116 178936162 (70314459) + MamGypLTR1a LTR/Gypsy 688 723 (61) 254299 334 21.4 1.0 13.4 chr1 178936463 178936511 (70314110) + MamGypLTR1a LTR/Gypsy 724 772 (12) 254299 706 29.9 13.0 5.6 chr1 180599444 180599904 (68650717) C MamGypLTR1d LTR/Gypsy (318) 495 1 257012 227 30.6 0.0 1.6 chr1 180915432 180915494 (68335127) C MamGypLTR2b LTR/Gypsy (430) 492 431 257493 388 33.0 7.2 4.9 chr1 181108102 181108622 (68141999) + LTR81A LTR/Gypsy 23 567 (783) 257799 292 25.0 0.0 1.4 chr1 181266864 181266932 (67983689) + MamGypLTR2c LTR/Gypsy 12 79 (989) 258031 975 30.5 11.6 5.6 chr1 181266960 181267778 (67982843) + MamGypLTR2c LTR/Gypsy 140 1007 (61) 258031 526 24.9 20.6 2.1 chr1 181328864 181329101 (67921520) C MamGypLTR1c LTR/Gypsy (0) 803 522 258123 272 21.4 15.4 4.3 chr1 181330324 181330440 (67920181) C LTR81B LTR/Gypsy (1225) 168 39 258125 232 24.6 3.3 0.0 chr1 182053377 182053437 (67197184) C MamGypLTR1b LTR/Gypsy (379) 403 341 259045 1153 32.3 9.3 1.3 chr1 182106703 182107414 (67143207) C LTR81A LTR/Gypsy (451) 899 114 259120 362 22.0 4.2 9.2 chr1 182339735 182339782 (66910839) C MamGypLTR1b LTR/Gypsy (45) 737 698 259586 362 25.4 3.9 8.7 chr1 182339978 182340103 (66910518) C MamGypLTR1b LTR/Gypsy (85) 699 573 259586 861 29.6 12.8 5.4 chr1 182587971 182588470 (66662151) C MamGypLTR1d LTR/Gypsy (2) 811 275 259982 726 28.3 1.6 6.4 chr1 182594944 182595192 (66655429) + MamGypLTR1d LTR/Gypsy 2 238 (575) 259996 250 28.6 2.4 15.7 chr1 182621254 182621419 (66629202) + MamGypLTR2c LTR/Gypsy 886 1029 (39) 260036 231 32.4 18.9 2.2 chr1 182735812 182735991 (66514630) + MamGypLTR1a LTR/Gypsy 52 261 (521) 260216 709 27.4 1.5 1.9 chr1 182736203 182736407 (66514214) + MamGypLTR1a LTR/Gypsy 579 782 (2) 260216 429 28.9 14.2 5.9 chr1 183243935 183244306 (66006315) + MamGypLTR1b LTR/Gypsy 202 604 (180) 261034 402 24.0 9.5 0.8 chr1 183244324 183244449 (66006172) + MamGypLTR1b LTR/Gypsy 644 780 (2) 261034 550 23.8 23.1 3.0 chr1 183293305 183293568 (65957053) + MamGypLTR2c LTR/Gypsy 749 1065 (3) 261121 288 28.8 15.2 4.5 chr1 184051927 184052104 (65198517) C MamGypLTR1d LTR/Gypsy (616) 197 1 262200 446 33.1 10.8 4.4 chr1 185568705 185569020 (63681601) + MamGypLTR3 LTR/Gypsy 504 839 (0) 264551 575 32.3 11.6 1.4 chr1 186201295 186201586 (63049035) C MamGypLTR1b LTR/Gypsy (62) 720 399 265406 542 33.3 7.2 4.1 chr1 186790093 186790411 (62460210) C MamGypLTR1b LTR/Gypsy (6) 776 448 266260 514 24.6 6.1 4.1 chr1 187131928 187132151 (62118470) C LTR81AB LTR/Gypsy (972) 378 140 266736 272 38.9 4.1 1.2 chr1 187174888 187175056 (62075565) + MamGypLTR3 LTR/Gypsy 483 656 (183) 266794 271 26.4 4.9 10.8 chr1 187447612 187447713 (61802908) + LTR81B LTR/Gypsy 47 142 (1251) 267171 234 34.6 5.0 5.8 chr1 187447767 187448008 (61802613) + LTR81B LTR/Gypsy 262 501 (892) 267171 272 32.3 2.9 8.1 chr1 187471150 187471321 (61779300) C MamGypLTR3 LTR/Gypsy (0) 839 677 267212 277 33.9 1.6 2.5 chr1 187689495 187689615 (61561006) C MamGypLTR1b LTR/Gypsy (325) 457 338 267511 515 35.6 2.5 4.4 chr1 187806122 187806441 (61444180) C MamGyp-int LTR/Gypsy (438) 4624 4311 267650 716 32.8 0.4 7.0 chr1 187806955 187807226 (61443395) C MamGyp-int LTR/Gypsy (861) 4201 3948 267650 631 28.9 7.8 2.6 chr1 187812424 187812729 (61437892) C MamGyp-int LTR/Gypsy (2549) 2513 2192 267664 541 34.8 6.6 7.8 chr1 187952563 187953611 (61297010) + LTR81B LTR/Gypsy 2 1044 (349) 267841 457 37.4 14.0 2.0 chr1 190366220 190366620 (58884001) C LTR81A LTR/Gypsy (487) 863 415 271145 286 29.6 1.7 3.9 chr1 190482809 190482987 (58767634) C MamGypLTR2b LTR/Gypsy (26) 896 722 271334 275 34.2 5.9 1.7 chr1 190966278 190966396 (58284225) + MamGypLTR1a LTR/Gypsy 329 452 (332) 271973 231 21.0 7.8 7.0 chr1 191238231 191238358 (58012263) + LTR81B LTR/Gypsy 1208 1336 (57) 272306 262 28.4 6.0 0.0 chr1 191394863 191394929 (57855692) C MamGypLTR3 LTR/Gypsy (131) 708 638 272519 313 25.9 1.1 2.3 chr1 191707754 191707840 (57542781) + LTR81A LTR/Gypsy 107 192 (1158) 272960 287 32.7 6.1 10.5 chr1 192083487 192083715 (57166906) C MamGypLTR2c LTR/Gypsy (453) 615 397 273464 238 22.8 0.0 3.4 chr1 192084343 192084401 (57166220) C LTR81A LTR/Gypsy (818) 532 476 273469 381 30.7 3.5 5.7 chr1 192204078 192204305 (57046316) C LTR81C LTR/Gypsy (17) 1136 914 273634 264 30.4 9.5 0.9 chr1 192243292 192243407 (57007214) + MamGypLTR1c LTR/Gypsy 470 595 (208) 273677 532 34.3 10.7 4.7 chr1 192378656 192379056 (56871565) C MamGypLTR2c LTR/Gypsy (3) 1065 641 273865 276 29.5 6.2 1.0 chr1 192380028 192380123 (56870498) C MamGypLTR2c LTR/Gypsy (960) 108 8 273865 225 31.5 6.5 1.1 chr1 192680797 192680889 (56569732) + MamGypLTR2c LTR/Gypsy 4 101 (967) 274256 426 28.0 14.9 1.3 chr1 193254936 193255163 (55995458) + MamGypLTR3 LTR/Gypsy 581 839 (0) 275163 308 33.1 12.9 6.7 chr1 193633241 193633908 (55616713) + MamGypLTR2b LTR/Gypsy 214 922 (0) 275667 282 33.0 1.0 1.0 chr1 193881369 193881466 (55369155) + LTR81B LTR/Gypsy 123 220 (969) 275988 636 30.7 9.3 11.4 chr1 193881693 193882387 (55368234) + LTR81B LTR/Gypsy 698 1378 (15) 275988 442 35.9 10.8 4.1 chr1 193989077 193989559 (55261062) + MamGypLTR1c LTR/Gypsy 14 528 (275) 276098 250 32.3 8.7 5.4 chr1 194080502 194080743 (55169878) + LTR81A LTR/Gypsy 197 446 (904) 276244 228 25.3 6.2 1.2 chr1 194081809 194081888 (55168733) + LTR81A LTR/Gypsy 1267 1350 (0) 276244 483 25.0 9.3 6.2 chr1 194267776 194268034 (54982587) C LTR81A LTR/Gypsy (1120) 273 3 276503 310 27.4 0.0 0.0 chr1 195984010 195984082 (53266539) C LTR81AB LTR/Gypsy (159) 119 47 278836 248 27.2 4.2 3.2 chr1 197827165 197827259 (51423362) + MamGypLTR3 LTR/Gypsy 326 421 (418) 281264 266 26.4 8.9 7.6 chr1 198097208 198097432 (51153189) C LTR81A LTR/Gypsy (1112) 238 11 281632 242 20.6 1.6 1.6 chr1 198598091 198598154 (50652467) C MamGypLTR1d LTR/Gypsy (27) 786 723 282308 239 25.0 0.0 0.0 chr1 198598181 198598228 (50652393) C MamGypLTR1d LTR/Gypsy (159) 625 578 282308 256 26.4 16.7 1.6 chr1 199003674 199003865 (50246756) C MamGypLTR2b LTR/Gypsy (30) 892 672 282826 255 19.6 8.7 6.7 chr1 199130223 199130326 (50120295) + LTR81B LTR/Gypsy 1283 1388 (5) 282996 516 21.4 4.8 4.1 chr1 199130471 199130616 (50120005) + MamGypLTR1c LTR/Gypsy 3 149 (664) 282997 654 34.7 10.1 5.2 chr1 199130982 199131516 (50119105) + MamGypLTR1c LTR/Gypsy 243 803 (0) 282997 277 29.2 1.8 2.8 chr1 199423684 199423792 (49826829) C MamGypLTR1d LTR/Gypsy (0) 813 706 283350 414 29.9 19.2 1.9 chr1 199590098 199590417 (49660204) C MamGypLTR1a LTR/Gypsy (116) 668 293 283582 271 32.1 0.7 6.2 chr1 199616345 199616490 (49634131) C LTR81B LTR/Gypsy (1192) 201 64 283616 319 21.1 5.2 6.2 chr1 199694739 199694834 (49555787) + MamGypLTR1d LTR/Gypsy 46 140 (673) 283714 234 30.5 12.6 5.2 chr1 199866059 199866193 (49384428) + LTR81A LTR/Gypsy 53 197 (956) 283993 351 31.6 10.2 10.9 chr1 199866342 199866771 (49383850) + LTR81A LTR/Gypsy 720 1146 (204) 283993 268 24.1 6.8 1.1 chr1 201068892 201068979 (48181642) + MamGypLTR1c LTR/Gypsy 42 134 (669) 286234 371 34.0 5.5 2.3 chr1 201069136 201069352 (48181269) + MamGypLTR1c LTR/Gypsy 577 800 (3) 286235 496 29.4 3.4 6.7 chr1 201088517 201088724 (48161897) + MamGypLTR3 LTR/Gypsy 546 746 (93) 286263 467 30.7 6.8 8.7 chr1 201164029 201164274 (48086347) C MamGypLTR1b LTR/Gypsy (204) 578 318 286391 467 30.7 6.8 8.7 chr1 201164580 201164920 (48085701) C MamGypLTR1b LTR/Gypsy (465) 317 2 286391 474 34.9 4.3 8.0 chr1 201238754 201239289 (48011332) + LTR81C LTR/Gypsy 127 642 (511) 286498 257 26.0 3.6 7.1 chr1 201239650 201239761 (48010860) + MamGypLTR2c LTR/Gypsy 953 1060 (8) 286499 417 29.3 2.1 0.7 chr1 201645954 201646094 (47604527) C MamGypLTR1a LTR/Gypsy (0) 784 642 287158 350 30.3 1.4 4.3 chr1 201647107 201647244 (47603377) C MamGypLTR1a LTR/Gypsy (648) 136 3 287158 390 36.0 4.5 4.9 chr1 201852257 201852522 (47398099) + MamGypLTR1b LTR/Gypsy 1 265 (519) 287475 524 28.7 14.2 0.9 chr1 201852701 201852932 (47397689) + MamGypLTR1b LTR/Gypsy 511 773 (9) 287475 276 28.7 5.5 15.0 chr1 203387693 203387946 (45862675) + MamGypLTR3 LTR/Gypsy 464 693 (146) 290090 240 19.2 4.0 1.4 chr1 203418394 203418467 (45832154) C MamGypLTR1b LTR/Gypsy (8) 774 699 290141 289 31.4 4.6 7.3 chr1 203418983 203419133 (45831488) C MamGypLTR2b LTR/Gypsy (720) 202 56 290143 339 29.1 16.3 3.8 chr1 203439187 203439529 (45811092) + MamGypLTR1d LTR/Gypsy 32 417 (396) 290183 258 31.0 5.1 3.4 chr1 203439744 203439860 (45810761) + MamGypLTR1d LTR/Gypsy 677 795 (18) 290183 348 26.4 1.8 10.3 chr1 203506145 203506309 (45744312) + MamGypLTR3 LTR/Gypsy 657 807 (32) 290300 534 29.1 11.1 4.1 chr1 204358106 204358310 (44892311) C MamGypLTR1b LTR/Gypsy (67) 715 486 291860 534 29.1 11.1 4.1 chr1 204358625 204358662 (44891959) C MamGypLTR1b LTR/Gypsy (297) 485 455 291860 235 30.7 3.5 11.6 chr1 204678692 204678864 (44571757) C MamGypLTR3 LTR/Gypsy (16) 823 665 292440 362 26.9 25.6 1.0 chr1 205800355 205800553 (43450068) + MamGypLTR1a LTR/Gypsy 18 265 (519) 294370 447 24.2 1.6 2.4 chr1 206167477 206167599 (43083022) + MamGypLTR1a LTR/Gypsy 1 122 (662) 294673 1021 24.2 7.4 0.4 chr1 206167767 206168023 (43082598) + MamGypLTR1a LTR/Gypsy 510 784 (0) 294673 566 22.0 0.5 8.7 chr1 207121251 207121434 (42129187) C MamGypLTR2b LTR/Gypsy (71) 851 683 295931 305 33.5 9.5 9.8 chr1 207156497 207157096 (42093525) C MamGypLTR2c LTR/Gypsy (412) 741 137 295984 338 19.4 2.2 2.9 chr1 207158544 207158655 (42091966) C MamGypLTR2c LTR/Gypsy (0) 1068 999 295989 540 31.2 16.6 5.3 chr1 207587860 207588439 (41662182) C MamGypLTR1c LTR/Gypsy (110) 674 53 296561 788 32.3 15.8 2.9 chr1 208155154 208155740 (41094881) C LTR81C LTR/Gypsy (193) 960 298 297311 265 28.6 8.0 10.6 chr1 208553672 208553870 (40696751) C LTR81B LTR/Gypsy (0) 1393 1200 297894 330 27.3 6.4 6.7 chr1 208555245 208555542 (40695079) C LTR81B LTR/Gypsy (1072) 321 25 297894 368 26.3 0.8 6.3 chr1 208843138 208843263 (40407358) C LTR81A LTR/Gypsy (1164) 186 68 298325 287 19.4 0.0 0.0 chr1 209142150 209142216 (40108405) + LTR81AB LTR/Gypsy 23 89 (189) 298769 242 25.5 3.8 3.8 chr1 209143212 209143317 (40107304) + LTR81B LTR/Gypsy 1241 1346 (47) 298771 300 34.5 0.7 4.7 chr1 209383974 209384122 (39866499) + LTR81B LTR/Gypsy 235 377 (1016) 299117 278 19.4 8.0 4.0 chr1 209384865 209384939 (39865682) + LTR81B LTR/Gypsy 1248 1325 (68) 299118 301 29.7 3.8 1.9 chr1 209417201 209417358 (39833263) + MamGypLTR2b LTR/Gypsy 755 915 (7) 299162 249 27.4 1.4 0.0 chr1 209764218 209764290 (39486331) + LTR81C LTR/Gypsy 948 1021 (132) 299669 850 31.4 11.6 5.0 chr1 209764733 209765292 (39485329) C LTR81C LTR/Gypsy (0) 1153 557 299670 295 30.6 13.5 5.0 chr1 209765787 209766164 (39484457) C LTR81C LTR/Gypsy (620) 533 124 299670 519 29.3 9.3 0.7 chr1 209870296 209870446 (39380175) + LTR81A LTR/Gypsy 731 894 (456) 299828 255 28.1 6.4 6.4 chr1 209883467 209883622 (39366999) + MamGypLTR2b LTR/Gypsy 740 895 (27) 299841 586 28.0 5.0 2.8 chr1 210037835 210038014 (39212607) + MamGypLTR1b LTR/Gypsy 542 725 (57) 300064 316 26.6 9.3 3.7 chr1 210384344 210384612 (38866009) C LTR81AB LTR/Gypsy (1107) 286 1 300540 248 21.1 20.4 3.5 chr1 210485763 210485875 (38764746) C MamGypLTR2c LTR/Gypsy (15) 1053 922 300715 336 35.7 4.0 7.1 chr1 210648886 210649111 (38601510) C LTR81B LTR/Gypsy (872) 521 303 300964 470 17.9 4.5 5.4 chr1 211070945 211071056 (38179565) + MamGypLTR1b LTR/Gypsy 4 114 (668) 301538 491 25.0 13.4 7.5 chr1 211287461 211287833 (37962788) + LTR81A LTR/Gypsy 735 1293 (57) 301785 822 27.2 6.7 9.1 chr1 211824620 211824707 (37425914) C LTR81A LTR/Gypsy (912) 438 344 302776 822 27.2 6.7 9.1 chr1 211824867 211825226 (37425395) C LTR81A LTR/Gypsy (1007) 343 1 302776 320 25.0 5.9 2.5 chr1 212103078 212103196 (37147425) C LTR81A LTR/Gypsy (1167) 183 61 303285 414 30.3 10.1 8.1 chr1 212758922 212759355 (36491266) C MamGypLTR2b LTR/Gypsy (0) 922 480 304402 299 24.8 23.2 0.7 chr1 212899689 212899826 (36350795) C LTR81A LTR/Gypsy (141) 1048 880 304623 366 19.6 25.3 4.4 chr1 212900498 212900640 (36349981) C LTR81A LTR/Gypsy (1050) 300 125 304623 700 31.9 5.5 7.4 chr1 214071077 214071495 (35179126) + LTR81C LTR/Gypsy 462 872 (281) 306375 233 32.1 5.8 4.4 chr1 214230879 214231015 (35019606) + MamGypLTR1b LTR/Gypsy 553 691 (91) 306566 292 30.4 10.8 4.1 chr1 214376214 214376421 (34874200) + MamGypLTR2b LTR/Gypsy 46 357 (711) 306778 375 28.2 5.7 2.6 chr1 214376619 214376811 (34873810) + MamGypLTR1c LTR/Gypsy 592 790 (13) 306779 240 31.2 12.0 4.2 chr1 214446464 214446630 (34803991) C MamGypLTR1c LTR/Gypsy (78) 725 546 306903 231 30.8 13.8 7.4 chr1 214447449 214447760 (34802861) C MamGypLTR2c LTR/Gypsy (715) 353 22 306906 251 24.7 7.3 3.1 chr1 214941502 214941597 (34309024) + LTR81A LTR/Gypsy 2 101 (1249) 307570 537 29.2 8.2 3.9 chr1 214942224 214942504 (34308117) + LTR81A LTR/Gypsy 159 451 (899) 307570 460 20.6 2.7 1.1 chr1 214988165 214988286 (34262335) C MamGypLTR2b LTR/Gypsy (20) 902 686 307631 496 19.1 4.6 3.9 chr1 215146876 215147028 (34103593) C MamGypLTR2b LTR/Gypsy (30) 892 739 307850 273 25.0 4.7 2.3 chr1 215194542 215194627 (34055994) C MamGypLTR2b LTR/Gypsy (42) 880 793 307924 272 19.6 2.0 0.0 chr1 215232887 215232937 (34017684) + LTR81A LTR/Gypsy 68 119 (1274) 307975 349 17.6 6.8 3.4 chr1 215232954 215233041 (34017580) + LTR81A LTR/Gypsy 223 313 (1037) 307975 231 28.8 5.3 4.6 chr1 215233056 215233186 (34017435) + LTR81A LTR/Gypsy 389 520 (873) 307975 273 32.0 12.2 6.6 chr1 215233633 215234010 (34016611) + LTR81A LTR/Gypsy 975 1373 (20) 307975 366 29.5 3.5 2.8 chr1 215332566 215332708 (33917913) C LTR81B LTR/Gypsy (488) 905 762 308120 250 33.6 2.9 0.0 chr1 215340380 215340483 (33910138) C MamGypLTR1c LTR/Gypsy (693) 110 4 308128 547 33.6 7.8 2.9 chr1 216180773 216181246 (33069375) + MamGypLTR1c LTR/Gypsy 244 746 (57) 309185 306 29.3 21.9 0.0 chr1 216637296 216637459 (32613162) + MamGypLTR2b LTR/Gypsy 642 841 (81) 309726 775 22.0 6.1 5.7 chr1 217220917 217221162 (32029459) + LTR81AB LTR/Gypsy 3 249 (29) 310449 509 24.8 1.6 2.4 chr1 217222052 217222175 (32028446) + LTR81AB LTR/Gypsy 1031 1153 (0) 310449 234 31.4 0.0 0.0 chr1 217472143 217472212 (31778409) + MamGypLTR2b LTR/Gypsy 816 885 (37) 310802 1279 31.1 12.2 2.9 chr1 217701820 217702534 (31548087) + LTR81A LTR/Gypsy 384 1164 (186) 311114 508 35.9 6.8 5.1 chr1 217830266 217830776 (31419845) C MamGypLTR1b LTR/Gypsy (103) 679 160 311324 284 33.1 9.3 2.5 chr1 217894567 217894773 (31355848) C LTR81 LTR/Gypsy (226) 963 742 311422 410 30.4 9.8 3.1 chr1 217895311 217895534 (31355087) C LTR81 LTR/Gypsy (950) 239 1 311422 284 29.5 16.5 3.3 chr1 218091217 218091458 (31159163) C MamGypLTR1c LTR/Gypsy (10) 793 520 311719 376 33.9 10.3 4.9 chr1 218100740 218101409 (31149212) + MamGypLTR2b LTR/Gypsy 216 921 (1) 311732 709 23.7 10.6 2.6 chr1 218438023 218438295 (30812326) + MamGypLTR1a LTR/Gypsy 10 304 (480) 312248 239 32.8 2.6 0.8 chr1 218865181 218865297 (30385324) C MamGypLTR1c LTR/Gypsy (586) 217 99 312878 466 27.2 0.5 6.5 chr1 218903116 218903300 (30347321) + MamGypLTR1a LTR/Gypsy 1 174 (610) 312933 457 22.8 12.2 2.1 chr1 219074892 219075079 (30175542) C LTR81C LTR/Gypsy (0) 1393 1187 313129 1091 33.8 10.6 4.4 chr1 219075058 219075803 (30174818) C LTR81C LTR/Gypsy (220) 933 142 313129 245 30.9 3.0 9.2 chr1 219075891 219076054 (30174567) C LTR81C LTR/Gypsy (97) 181 28 313129 285 29.1 9.3 0.0 chr1 219391028 219391113 (29859508) C MamGypLTR1b LTR/Gypsy (326) 456 363 313523 250 31.7 7.1 2.4 chr1 219391121 219391246 (29859375) C MamGypLTR1b LTR/Gypsy (640) 142 11 313523 287 30.1 2.2 1.5 chr1 219465091 219465225 (29785396) C LTR81B LTR/Gypsy (0) 1393 1258 313615 617 29.1 2.6 3.0 chr1 219491258 219491487 (29759134) + MamGypLTR3 LTR/Gypsy 538 766 (73) 313657 642 32.7 9.1 3.4 chr1 219591037 219591533 (29659088) C MamGypLTR1a LTR/Gypsy (257) 527 3 313780 763 34.9 9.0 3.8 chr1 219772691 219773348 (29477273) + MamGyp-int LTR/Gypsy 2304 2990 (2072) 314039 763 34.9 9.0 3.8 chr1 219773395 219773425 (29477196) + MamGyp-int LTR/Gypsy 2991 3029 (2033) 314039 727 36.2 9.6 2.9 chr1 219774789 219775400 (29475221) + MamGyp-int LTR/Gypsy 3514 4166 (896) 314039 249 31.8 0.0 11.5 chr1 220647078 220647269 (28603352) C LTR81 LTR/Gypsy (282) 907 738 315443 280 38.4 9.7 2.6 chr1 221193058 221193522 (28057099) C MamGypLTR1a LTR/Gypsy (0) 784 287 316189 465 32.9 15.1 1.8 chr1 222056378 222056678 (27193943) C MamGypLTR1b LTR/Gypsy (154) 628 288 317405 480 24.1 13.8 8.6 chr1 222389343 222389632 (26860989) + LTR81C LTR/Gypsy 846 1150 (3) 317852 474 26.5 10.4 4.8 chr1 223309231 223309540 (25941081) + MamGypLTR1d LTR/Gypsy 1 321 (461) 319243 348 28.0 20.4 7.3 chr1 223309578 223309866 (25940755) + MamGypLTR1d LTR/Gypsy 476 812 (1) 319243 247 29.0 2.9 10.4 chr1 223366168 223366340 (25884281) + MamGypLTR2c LTR/Gypsy 862 1021 (47) 319333 233 15.6 0.0 0.0 chr1 223482934 223482978 (25767643) + MamGypLTR1b LTR/Gypsy 699 743 (39) 319470 324 27.2 8.3 8.7 chr1 223496174 223496474 (25754147) + LTR81AB LTR/Gypsy 2 283 (870) 319492 331 31.4 1.3 8.1 chr1 223657813 223657961 (25592660) C MamGypLTR3 LTR/Gypsy (1) 838 700 319709 325 28.0 6.9 3.7 chr1 223822617 223822805 (25427816) + LTR81C LTR/Gypsy 957 1151 (2) 319897 432 31.0 10.0 4.4 chr1 224365346 224365686 (24884935) + MamGypLTR2c LTR/Gypsy 396 755 (313) 320883 347 20.6 3.4 8.9 chr1 224773560 224773739 (24476882) + LTR81A LTR/Gypsy 133 302 (1091) 321718 639 27.0 10.6 2.3 chr1 224792013 224792315 (24458306) + MamGypLTR1a LTR/Gypsy 113 440 (344) 321750 817 22.2 5.0 2.7 chr1 224794499 224794696 (24455925) + MamGypLTR1a LTR/Gypsy 521 723 (61) 321750 397 30.7 4.3 0.0 chr1 225083954 225084093 (24166528) + MamGypLTR3 LTR/Gypsy 249 394 (445) 322191 455 26.1 10.9 5.7 chr1 225334589 225334763 (23915858) C MamGypLTR1a LTR/Gypsy (598) 186 3 322486 288 25.0 11.8 5.5 chr1 226721813 226721922 (22528699) + LTR81C LTR/Gypsy 65 181 (972) 324881 537 28.1 5.6 6.0 chr1 227111338 227111553 (22139068) C MamGypLTR3 LTR/Gypsy (22) 817 603 325453 236 26.2 3.3 0.0 chr1 227485872 227485932 (21764689) C MamGypLTR1c LTR/Gypsy (149) 654 592 325993 254 21.9 6.2 0.0 chr1 227643855 227643918 (21606703) C MamGypLTR3 LTR/Gypsy (92) 747 680 326284 365 31.1 7.1 5.1 chr1 229181784 229182037 (20068584) C MamGypLTR1c LTR/Gypsy (484) 319 61 328293 256 33.1 10.3 1.6 chr1 229520798 229520981 (19729640) C MamGypLTR2b LTR/Gypsy (29) 893 694 328829 367 28.4 5.8 9.4 chr1 229913857 229914132 (19336489) + LTR81C LTR/Gypsy 866 1131 (22) 329517 881 28.3 9.4 2.7 chr1 230706641 230707043 (18543578) C MamGypLTR1a LTR/Gypsy (270) 514 85 330690 443 29.9 11.2 4.3 chr1 230760858 230761206 (18489415) C LTR81 LTR/Gypsy (24) 1165 793 330768 348 30.9 20.1 3.5 chr1 230761241 230761767 (18488854) C LTR81 LTR/Gypsy (458) 695 2 330768 270 32.0 6.4 6.4 chr1 230910790 230911039 (18339582) C MamGypLTR1b LTR/Gypsy (53) 729 480 330994 300 31.5 3.7 3.0 chr1 231259818 231259951 (17990670) + LTR81A LTR/Gypsy 2 136 (1017) 331533 555 31.1 11.3 1.7 chr1 231260961 231261251 (17989370) + LTR81A LTR/Gypsy 1032 1350 (0) 331533 378 25.0 2.6 4.4 chr1 231289348 231289460 (17961161) C MamGypLTR2b LTR/Gypsy (5) 917 807 331583 344 27.0 13.7 7.1 chr1 231454070 231454280 (17796341) + MamGypLTR1c LTR/Gypsy 1 225 (578) 331858 1128 24.2 3.3 2.0 chr1 231606642 231606940 (17643681) + LTR81B LTR/Gypsy 3 305 (1088) 332112 780 21.6 18.8 4.4 chr1 231608312 231608630 (17641991) + LTR81B LTR/Gypsy 1029 1393 (0) 332112 466 31.6 16.1 4.9 chr1 232450217 232450874 (16799747) + MamGypLTR1c LTR/Gypsy 61 792 (11) 333350 343 35.3 1.8 0.6 chr1 232951188 232951355 (16299266) C MamGypLTR3 LTR/Gypsy (0) 839 670 333983 422 33.6 8.6 3.8 chr1 233595953 233596243 (15654378) + MamGypLTR3 LTR/Gypsy 495 799 (40) 334923 289 31.9 10.3 0.7 chr1 233600747 233600882 (15649739) + MamGypLTR3 LTR/Gypsy 656 804 (35) 334931 392 32.8 22.3 0.7 chr1 234017227 234017687 (15232934) C LTR81 LTR/Gypsy (11) 1142 582 335515 402 29.7 0.0 4.6 chr1 234017886 234018016 (15232605) C LTR81 LTR/Gypsy (782) 407 277 335515 296 33.3 8.4 2.4 chr1 234018537 234018702 (15231919) C LTR81 LTR/Gypsy (915) 274 99 335515 235 30.9 7.6 8.0 chr1 235064083 235064307 (14186314) + MamGypLTR2c LTR/Gypsy 5 228 (840) 337091 260 26.0 1.4 1.4 chr1 235074864 235074937 (14175684) + MamGypLTR3 LTR/Gypsy 166 239 (600) 337116 246 26.8 3.6 0.0 chr1 235520253 235520308 (13730313) + MamGypLTR1a LTR/Gypsy 634 691 (93) 337917 358 19.5 13.7 7.9 chr1 235791524 235791662 (13458959) + MamGypLTR1c LTR/Gypsy 141 287 (516) 338484 344 28.6 7.7 1.5 chr1 235799427 235799581 (13451040) + LTR81A LTR/Gypsy 8 173 (1177) 338500 559 35.3 9.8 1.8 chr1 236570238 236570609 (12680012) C MamGypLTR1b LTR/Gypsy (29) 784 360 339905 321 34.7 6.5 9.4 chr1 237077588 237077927 (12172694) + MamGypLTR3 LTR/Gypsy 364 693 (146) 340769 313 27.4 2.3 8.6 chr1 237093713 237093840 (12156781) C LTR81B LTR/Gypsy (195) 1155 1036 340805 586 30.2 2.9 4.5 chr1 237094772 237095017 (12155604) C LTR81B LTR/Gypsy (1048) 345 104 340805 510 27.8 11.6 4.8 chr1 237559782 237560049 (11690572) + MamGypLTR1b LTR/Gypsy 10 295 (487) 341525 249 26.0 2.0 4.0 chr1 237563844 237563943 (11686678) + MamGypLTR1c LTR/Gypsy 662 759 (44) 341534 575 25.9 1.5 3.6 chr1 237592846 237593041 (11657580) C LTR81A LTR/Gypsy (1149) 201 10 341584 336 30.8 4.1 6.0 chr1 237595915 237596141 (11654480) C LTR81A LTR/Gypsy (1058) 292 76 341589 585 31.8 12.4 6.7 chr1 238068810 238069496 (11181125) + MamGypLTR3 LTR/Gypsy 64 789 (50) 342248 460 29.4 6.9 2.5 chr1 238145697 238145972 (11104649) + LTR81B LTR/Gypsy 1 288 (1105) 342341 229 27.1 3.4 0.0 chr1 238287257 238287315 (10963306) C MamGypLTR1c LTR/Gypsy (72) 731 671 342519 585 34.1 9.0 7.2 chr1 238581835 238582491 (10668130) C MamGypLTR1a LTR/Gypsy (68) 716 48 342959 482 36.7 7.2 1.6 chr1 238753206 238753568 (10497053) C MamGypLTR1b LTR/Gypsy (0) 782 400 343197 309 32.0 3.7 7.4 chr1 238753629 238753790 (10496831) C MamGypLTR1b LTR/Gypsy (569) 213 58 343197 366 35.6 13.2 2.1 chr1 238992480 238992947 (10257674) C LTR81B LTR/Gypsy (203) 1190 671 343528 225 22.6 1.9 0.0 chr1 239144951 239145003 (10105618) C MamGypLTR3 LTR/Gypsy (594) 245 192 343734 322 32.9 4.1 0.7 chr1 239159155 239159301 (10091320) + LTR81B LTR/Gypsy 656 807 (586) 343756 244 37.5 1.3 5.9 chr1 239159462 239159614 (10091007) + LTR81B LTR/Gypsy 1000 1145 (248) 343756 277 28.4 0.0 3.9 chr1 239761060 239761136 (9489485) + MamGypLTR1a LTR/Gypsy 146 219 (565) 344660 365 35.5 10.3 4.2 chr1 239761214 239761619 (9489002) + MamGypLTR1a LTR/Gypsy 315 745 (39) 344660 299 21.2 13.4 2.4 chr1 239835046 239835127 (9415494) + LTR81B LTR/Gypsy 207 297 (1096) 344757 266 21.0 24.3 9.2 chr1 240793668 240793819 (8456802) + LTR81A LTR/Gypsy 7 181 (1212) 346187 286 32.4 0.0 0.0 chr1 240992788 240992889 (8257732) + LTR81A LTR/Gypsy 1 102 (176) 346545 466 34.9 6.8 1.4 chr1 240993440 240993660 (8256961) + LTR81A LTR/Gypsy 668 900 (450) 346545 262 36.2 1.4 5.3 chr1 240993697 240993903 (8256718) + LTR81C LTR/Gypsy 781 979 (174) 346547 320 18.5 1.5 0.0 chr1 240993951 240994015 (8256606) + LTR81A LTR/Gypsy 1253 1318 (32) 346548 317 26.4 28.8 0.6 chr1 242469161 242469514 (6781107) + MamGypLTR1a LTR/Gypsy 173 626 (158) 348982 322 30.7 9.8 6.7 chr1 242940527 242940719 (6309902) + LTR81B LTR/Gypsy 1043 1223 (170) 349684 322 30.7 9.8 6.7 chr1 242941030 242941131 (6309490) + LTR81B LTR/Gypsy 1224 1348 (45) 349684 279 31.6 13.8 2.5 chr1 243278724 243279097 (5971524) C MamGypLTR1c LTR/Gypsy (8) 776 374 350276 258 24.2 6.5 1.1 chr1 243279527 243279618 (5971003) C MamGypLTR1c LTR/Gypsy (602) 201 105 350276 385 22.0 7.0 0.0 chr1 244023650 244023749 (5226872) + MamGypLTR1c LTR/Gypsy 680 786 (17) 351347 227 20.9 13.1 8.1 chr1 244506099 244506197 (4744424) C MamGypLTR1c LTR/Gypsy (1) 802 699 352127 419 36.9 1.2 5.1 chr1 244643933 244644189 (4606432) C MamGypLTR1a LTR/Gypsy (242) 542 296 352361 241 29.6 8.6 1.7 chr1 244757199 244757315 (4493306) C LTR81C LTR/Gypsy (1023) 130 6 352519 502 19.6 15.7 0.8 chr1 246158812 246158945 (3091676) + MamGypLTR1d LTR/Gypsy 4 157 (656) 354831 462 26.2 9.2 2.9 chr1 246159174 246159346 (3091275) + MamGypLTR1d LTR/Gypsy 620 813 (0) 354831 773 25.2 2.4 3.6 chr1 246450914 246451164 (2799457) + LTR81A LTR/Gypsy 6 253 (1097) 355240 256 31.4 3.7 3.7 chr1 246451699 246451807 (2798814) + LTR81A LTR/Gypsy 680 788 (562) 355240 310 29.7 5.6 5.6 chr1 246451935 246452130 (2798491) + LTR81A LTR/Gypsy 903 1098 (55) 355240 358 35.2 6.5 5.4 chr1 246627919 246628104 (2622517) C LTR81C LTR/Gypsy (252) 901 714 355537 606 33.3 1.0 1.6 chr1 246632267 246632458 (2618163) C LTR81A LTR/Gypsy (487) 863 673 355549 278 11.1 19.2 7.7 chr1 246665399 246665437 (2585184) C LTR81C LTR/Gypsy (8) 1145 1095 355617 278 11.1 19.2 7.7 chr1 246665734 246665771 (2584850) C LTR81C LTR/Gypsy (59) 1094 1059 355617 788 29.3 21.5 6.2 chr1 246665784 246666695 (2583926) C LTR81A LTR/Gypsy (64) 1286 235 355619 284 29.4 10.3 4.0 chr1 246932053 246932275 (2318346) C MamGypLTR3 LTR/Gypsy (27) 812 576 356077 228 14.6 25.0 0.0 chr1 246932333 246932380 (2318241) C MamGypLTR3 LTR/Gypsy (409) 430 371 356077 268 32.5 2.5 4.9 chr1 247573467 247573628 (1676993) C MamGypLTR2c LTR/Gypsy (98) 970 813 357140 227 13.9 0.0 5.3 chr1 247827620 247827657 (1422964) + LTR81B LTR/Gypsy 252 287 (1106) 357488 226 32.3 1.4 7.8 chr2 167093 167233 (243032140) C MamGypLTR1a LTR/Gypsy (15) 769 638 359201 278 28.3 13.3 0.0 chr2 388515 388627 (242810746) C LTR81A LTR/Gypsy (980) 370 243 359431 382 27.9 4.1 4.7 chr2 390706 390874 (242808499) C LTR81A LTR/Gypsy (1149) 201 34 359431 284 29.4 11.8 0.8 chr2 752492 752618 (242446755) + MamGypLTR1b LTR/Gypsy 618 758 (24) 359782 246 26.4 14.1 1.1 chr2 960035 960126 (242239247) + LTR81A LTR/Gypsy 68 171 (1179) 359989 384 31.7 5.3 6.9 chr2 1606029 1606346 (241593027) C MamGypLTR1c LTR/Gypsy (447) 366 47 360571 712 33.2 11.5 6.7 chr2 2549644 2550571 (240648802) C MamGypLTR2c LTR/Gypsy (38) 1030 58 361625 333 28.2 21.1 7.3 chr2 3026866 3027278 (240172095) C MamGypLTR1c LTR/Gypsy (331) 482 13 362211 293 33.0 1.0 1.0 chr2 3027351 3027454 (240171919) + MamGyp-int LTR/Gypsy 4383 4486 (576) 362212 298 31.5 9.2 5.3 chr2 3084181 3084593 (240114780) C LTR81 LTR/Gypsy (548) 641 205 362291 274 28.1 9.8 1.6 chr2 3486576 3486698 (239712675) + MamGypLTR1b LTR/Gypsy 629 761 (21) 362763 240 28.5 22.5 0.7 chr2 3702258 3702395 (239496978) C MamGypLTR1d LTR/Gypsy (8) 805 638 363016 282 33.3 7.5 2.8 chr2 3977283 3977495 (239221878) + MamGypLTR1a LTR/Gypsy 1 223 (561) 363364 249 37.4 9.0 0.6 chr2 4419387 4419542 (238779831) C MamGypLTR1c LTR/Gypsy (178) 625 457 363906 321 28.9 5.2 3.2 chr2 5805966 5806119 (237393254) + MamGypLTR1c LTR/Gypsy 632 788 (15) 365688 608 26.2 2.2 6.2 chr2 6133286 6133509 (237065864) + LTR81AB LTR/Gypsy 25 239 (39) 366147 802 34.4 8.1 4.8 chr2 6357868 6358682 (236840691) C LTR81B LTR/Gypsy (367) 1026 185 366467 489 34.2 6.9 5.0 chr2 6442621 6443202 (236756171) + MamGypLTR1b LTR/Gypsy 182 774 (8) 366609 397 26.1 6.6 2.2 chr2 6619649 6619785 (236579588) C LTR81B LTR/Gypsy (10) 1383 1241 366839 285 22.4 9.1 2.0 chr2 6816929 6817055 (236382318) + MamGypLTR1b LTR/Gypsy 3 147 (656) 367133 242 33.6 6.2 4.7 chr2 6817304 6817431 (236381942) + MamGypLTR1b LTR/Gypsy 534 663 (119) 367134 538 33.5 10.6 2.0 chr2 6817550 6818038 (236381335) + MamGypLTR1b LTR/Gypsy 201 719 (65) 367133 538 33.0 11.1 1.7 chr2 6818138 6818191 (236381182) + MamGypLTR1b LTR/Gypsy 718 779 (3) 367133 376 26.7 4.5 0.8 chr2 7038717 7038848 (236160525) + MamGypLTR2b LTR/Gypsy 770 906 (16) 367419 312 26.6 21.8 4.4 chr2 7053744 7053886 (236145487) + MamGypLTR1a LTR/Gypsy 134 295 (489) 367440 312 26.6 21.8 4.4 chr2 7054241 7054344 (236145029) + MamGypLTR1a LTR/Gypsy 296 423 (361) 367440 239 31.0 0.8 3.4 chr2 7306044 7306160 (235893213) + MamGypLTR1d LTR/Gypsy 627 740 (73) 367767 240 27.7 4.2 2.1 chr2 7394359 7394454 (235804919) C LTR81C LTR/Gypsy (1042) 111 14 367912 592 31.1 11.9 3.8 chr2 7424004 7424448 (235774925) C MamGypLTR2c LTR/Gypsy (529) 539 59 367954 290 29.0 13.6 9.7 chr2 8050684 8050750 (235148623) + MamGypLTR1c LTR/Gypsy 426 495 (308) 368848 290 29.0 13.6 9.7 chr2 8051765 8051975 (235147398) + MamGypLTR1c LTR/Gypsy 496 714 (89) 368848 295 32.1 1.8 1.8 chr2 8093000 8093110 (235106263) + LTR81B LTR/Gypsy 1270 1380 (13) 368909 267 28.4 4.0 0.0 chr2 8101520 8101593 (235097780) C MamGypLTR2c LTR/Gypsy (976) 92 16 368918 349 33.1 1.6 8.0 chr2 8528291 8528477 (234670896) + MamGypLTR3 LTR/Gypsy 479 653 (186) 369521 228 17.6 2.7 9.3 chr2 9297238 9297312 (233902061) + LTR81A LTR/Gypsy 1261 1330 (20) 370641 323 29.4 13.9 2.5 chr2 9303525 9303726 (233895647) C MamGypLTR2b LTR/Gypsy (15) 907 683 370659 307 25.9 11.2 8.3 chr2 9803867 9804144 (233395229) C LTR81B LTR/Gypsy (30) 1363 1078 371542 634 30.4 8.4 3.9 chr2 9804526 9804908 (233394465) C LTR81B LTR/Gypsy (922) 471 72 371542 277 25.7 2.7 0.0 chr2 9838241 9838314 (233361059) + MamGypLTR2c LTR/Gypsy 36 111 (957) 371610 273 30.1 6.4 3.5 chr2 9844799 9844939 (233354434) C MamGypLTR1a LTR/Gypsy (235) 549 405 371623 367 30.2 1.7 0.0 chr2 9920420 9920538 (233278835) + LTR81AB LTR/Gypsy 1 121 (157) 371773 280 28.5 12.9 7.3 chr2 11073516 11073693 (232125680) C MamGypLTR1a LTR/Gypsy (0) 782 595 373852 379 28.9 16.9 6.8 chr2 11074288 11074613 (232124760) C MamGypLTR1a LTR/Gypsy (425) 359 1 373852 376 29.0 10.6 3.1 chr2 11081728 11081887 (232117486) + LTR81C LTR/Gypsy 936 1107 (46) 373864 505 28.8 9.8 2.9 chr2 11091439 11091780 (232107593) C LTR81C LTR/Gypsy (180) 1213 692 373881 234 17.8 2.2 0.0 chr2 11241993 11242037 (231957336) + LTR81 LTR/Gypsy 1121 1166 (23) 374119 316 36.1 3.5 3.5 chr2 11542553 11542724 (231656649) + MamGypLTR2b LTR/Gypsy 120 291 (631) 374670 233 22.0 0.0 0.0 chr2 11543136 11543185 (231656188) + MamGypLTR2b LTR/Gypsy 802 851 (71) 374672 242 29.7 7.9 2.6 chr2 12092492 12092605 (231106768) + MamGypLTR1b LTR/Gypsy 634 753 (29) 375591 291 35.8 5.6 6.6 chr2 12366663 12367039 (230832334) C MamGypLTR3 LTR/Gypsy (52) 787 415 375995 273 27.8 5.4 2.3 chr2 12595414 12595542 (230603831) + MamGypLTR2b LTR/Gypsy 790 922 (0) 376396 306 39.6 4.2 5.2 chr2 13997012 13997341 (229202032) + MamGypLTR2c LTR/Gypsy 27 353 (715) 378407 344 37.9 5.2 3.4 chr2 14531464 14531791 (228667582) C MamGypLTR3 LTR/Gypsy (0) 839 506 379198 233 27.5 5.8 0.0 chr2 14674952 14675020 (228524353) C LTR81C LTR/Gypsy (960) 193 121 379402 227 28.1 10.0 1.1 chr2 14824593 14824682 (228374691) C MamGypLTR3 LTR/Gypsy (28) 811 714 379636 337 23.8 8.2 8.2 chr2 16011224 16011406 (227187967) C LTR81A LTR/Gypsy (1167) 183 1 381518 478 31.3 12.5 6.6 chr2 16691500 16691834 (226507539) C MamGypLTR3 LTR/Gypsy (4) 835 481 382638 228 26.9 10.3 7.7 chr2 16866240 16866356 (226333017) C LTR81B LTR/Gypsy (234) 1116 997 382891 231 32.7 3.2 3.9 chr2 16866761 16866916 (226332457) C LTR81B LTR/Gypsy (1058) 335 181 382891 430 28.0 10.6 3.5 chr2 17017605 17017830 (226181543) + MamGypLTR2c LTR/Gypsy 827 1068 (0) 383118 241 29.7 0.0 0.0 chr2 17401067 17401130 (225798243) C MamGypLTR1a LTR/Gypsy (67) 715 652 383668 280 33.8 8.3 0.0 chr2 17401456 17401600 (225797773) C MamGypLTR1a LTR/Gypsy (519) 265 109 383668 647 34.7 10.5 0.8 chr2 18042495 18042743 (225156630) + MamGyp-int LTR/Gypsy 2266 2533 (2529) 384605 647 34.7 10.5 0.8 chr2 18042764 18042990 (225156383) + MamGyp-int LTR/Gypsy 2534 2787 (2275) 384605 427 38.6 3.2 3.2 chr2 18043364 18043580 (225155793) + MamGyp-int LTR/Gypsy 3074 3290 (1772) 384605 458 25.8 11.6 4.0 chr2 18044969 18045166 (225154207) + LTR81A LTR/Gypsy 2 214 (1136) 384609 339 23.1 25.4 5.4 chr2 18045689 18045966 (225153407) + MamGypLTR2c LTR/Gypsy 695 956 (112) 384610 311 33.5 28.0 2.8 chr2 18570552 18570948 (224628425) C LTR81 LTR/Gypsy (150) 1039 543 385352 226 34.3 0.0 0.0 chr2 18571460 18571526 (224627847) C LTR81 LTR/Gypsy (1205) 145 79 385352 482 28.4 6.9 3.0 chr2 19592194 19592425 (223606948) + MamGypLTR1c LTR/Gypsy 558 798 (5) 386685 254 31.7 13.1 6.3 chr2 19679670 19679844 (223519529) + MamGypLTR2c LTR/Gypsy 78 264 (804) 386808 543 27.5 1.1 2.7 chr2 20266546 20266732 (222932641) + LTR81A LTR/Gypsy 1 184 (1166) 387622 418 29.2 9.6 3.5 chr2 20273258 20273569 (222925804) + MamGypLTR1a LTR/Gypsy 52 382 (402) 387636 278 26.1 9.1 0.0 chr2 20274399 20274486 (222924887) + MamGypLTR1a LTR/Gypsy 716 811 (2) 387636 492 30.7 8.0 4.5 chr2 20279181 20279586 (222919787) C LTR81B LTR/Gypsy (5) 1388 751 387644 411 31.1 9.2 2.8 chr2 20293263 20293480 (222905893) C MamGypLTR1a LTR/Gypsy (158) 626 395 387662 394 35.2 8.8 3.6 chr2 20343792 20344121 (222855252) C MamGypLTR3 LTR/Gypsy (14) 825 479 387747 491 28.0 6.8 7.0 chr2 21181982 21182337 (222017036) + MamGypLTR1b LTR/Gypsy 1 320 (493) 388965 441 25.6 12.8 1.9 chr2 21191089 21191299 (222008074) C LTR81C LTR/Gypsy (57) 1096 863 388975 573 24.8 10.2 6.8 chr2 21193565 21193828 (222005545) C LTR81A LTR/Gypsy (1068) 282 10 388979 261 35.0 7.6 7.9 chr2 21678161 21678489 (221520884) + MamGypLTR2b LTR/Gypsy 378 705 (217) 389599 725 30.1 3.8 10.2 chr2 21796176 21796597 (221402776) + MamGypLTR2b LTR/Gypsy 506 900 (22) 389752 406 30.6 8.8 1.9 chr2 22179875 22180034 (221019339) C LTR81B LTR/Gypsy (224) 1169 999 390227 257 22.4 2.6 2.6 chr2 23495864 23495941 (219703432) C MamGypLTR1b LTR/Gypsy (58) 724 647 391932 300 23.5 4.8 8.7 chr2 24273537 24273662 (218925711) C MamGypLTR1a LTR/Gypsy (33) 751 631 393166 633 32.9 10.3 10.2 chr2 24811721 24812499 (218386874) C LTR81B LTR/Gypsy (0) 1393 647 394140 633 32.9 10.3 10.2 chr2 24812557 24813146 (218386227) C LTR81B LTR/Gypsy (747) 646 22 394140 267 29.1 0.0 12.0 chr2 25158052 25158176 (218041197) + MamGypLTR2c LTR/Gypsy 362 471 (597) 394688 530 28.8 8.3 5.6 chr2 25158289 25158627 (218040746) + MamGypLTR2c LTR/Gypsy 652 999 (69) 394688 353 21.8 4.5 2.2 chr2 25620376 25620464 (217578909) + MamGypLTR2b LTR/Gypsy 778 868 (54) 395523 356 25.4 0.0 12.8 chr2 25949744 25949826 (217249547) + LTR81AB LTR/Gypsy 101 170 (108) 396113 356 25.4 0.0 12.8 chr2 25950300 25950364 (217249009) + LTR81AB LTR/Gypsy 171 230 (48) 396113 265 30.5 0.0 5.9 chr2 25950590 25950690 (217248683) + LTR81AB LTR/Gypsy 305 399 (754) 396113 323 26.4 4.3 1.1 chr2 25950716 25950807 (217248566) + MamGypLTR2c LTR/Gypsy 424 518 (550) 396115 310 21.6 12.6 1.0 chr2 26870025 26870127 (216329246) + LTR81C LTR/Gypsy 182 296 (1097) 397878 551 25.2 13.0 3.6 chr2 26870301 26870601 (216328772) + LTR81C LTR/Gypsy 366 694 (459) 397878 341 25.7 4.6 0.0 chr2 27254357 27254465 (215944908) C MamGypLTR1c LTR/Gypsy (0) 803 690 398615 287 24.6 7.8 5.2 chr2 28444173 28444288 (214755085) C LTR81AB LTR/Gypsy (157) 121 3 400667 875 21.8 7.0 3.5 chr2 28648169 28648453 (214550920) C LTR81A LTR/Gypsy (1038) 312 18 400980 509 31.4 19.6 7.5 chr2 28666996 28667704 (214531669) + MamGypLTR1d LTR/Gypsy 16 810 (3) 401014 325 28.0 4.0 0.0 chr2 29245448 29245547 (213953826) C MamGypLTR1b LTR/Gypsy (2) 780 677 402071 1031 21.3 1.4 9.0 chr2 29313731 29314008 (213885365) + MamGypLTR2b LTR/Gypsy 666 922 (0) 402176 331 33.6 1.5 2.2 chr2 29588952 29589088 (213610285) + MamGypLTR2c LTR/Gypsy 3 138 (930) 402574 403 32.2 6.2 4.0 chr2 29589524 29589749 (213609624) + MamGypLTR2c LTR/Gypsy 764 994 (74) 402574 662 36.6 2.5 0.9 chr2 30208017 30208341 (212991032) C MamGyp-int LTR/Gypsy (4704) 358 29 403506 1118 30.3 8.3 7.5 chr2 30208373 30209025 (212990348) C MamGypLTR1b LTR/Gypsy (0) 782 125 403506 1002 32.3 9.9 3.0 chr2 30592307 30593071 (212606302) C MamGypLTR2b LTR/Gypsy (52) 870 53 404197 506 32.2 4.2 1.3 chr2 31189225 31189463 (212009910) + MamGypLTR1a LTR/Gypsy 510 755 (29) 405063 811 26.1 4.2 0.8 chr2 31263494 31263729 (211935644) + MamGypLTR1b LTR/Gypsy 539 782 (0) 405173 294 30.5 16.8 3.1 chr2 31344749 31345065 (211854308) + MamGypLTR1a LTR/Gypsy 74 434 (350) 405282 287 28.6 4.4 0.0 chr2 31345247 31345337 (211854036) + MamGypLTR1a LTR/Gypsy 680 774 (8) 405282 295 27.2 11.7 10.9 chr2 31383097 31383352 (211816021) C LTR81B LTR/Gypsy (8) 1385 1128 405336 469 25.9 23.5 8.8 chr2 33307446 33307503 (209891870) C MamGypLTR1d LTR/Gypsy (2) 811 755 408654 469 25.9 23.5 8.8 chr2 33307792 33308439 (209890934) C MamGypLTR1d LTR/Gypsy (59) 754 1 408654 280 35.3 7.4 5.9 chr2 33850738 33851008 (209348365) C MamGypLTR3 LTR/Gypsy (83) 756 482 409484 498 23.9 0.7 2.1 chr2 34178648 34178788 (209020585) C LTR81AB LTR/Gypsy (56) 222 84 409997 329 22.8 6.5 3.3 chr2 34750288 34750407 (208448966) C MamGypLTR1c LTR/Gypsy (0) 922 713 410832 313 30.9 3.5 2.6 chr2 34751566 34751678 (208447695) C MamGypLTR1c LTR/Gypsy (337) 466 353 410835 265 19.0 10.3 0.0 chr2 35890254 35890311 (207309062) + LTR81B LTR/Gypsy 110 173 (1220) 412200 407 33.5 7.9 6.4 chr2 35998923 35999250 (207200123) C LTR81B LTR/Gypsy (315) 1078 746 412315 454 30.9 18.9 3.6 chr2 36962510 36963134 (206236239) C MamGypLTR1b LTR/Gypsy (46) 736 11 413568 242 31.2 4.7 8.3 chr2 37639649 37639840 (205559533) + MamGypLTR1c LTR/Gypsy 584 768 (35) 414772 260 22.6 19.3 14.6 chr2 37711815 37712171 (205487202) + MamGypLTR1c LTR/Gypsy 3 376 (427) 414881 671 29.5 14.4 0.3 chr2 37712701 37713013 (205486360) + MamGypLTR1c LTR/Gypsy 444 800 (3) 414881 273 24.1 4.8 0.0 chr2 37798951 37799033 (205400340) C LTR81A LTR/Gypsy (1118) 232 146 415007 369 27.9 12.9 7.6 chr2 38063557 38063820 (205135553) C LTR81B LTR/Gypsy (55) 1338 1061 415370 253 29.9 18.4 0.0 chr2 38064416 38064502 (205134871) C LTR81B LTR/Gypsy (971) 182 80 415370 613 21.9 12.6 7.3 chr2 38108090 38108335 (205091038) + LTR81B LTR/Gypsy 22 280 (1113) 415428 515 29.8 9.7 12.7 chr2 38122377 38122781 (205076592) + MamGypLTR2c LTR/Gypsy 509 907 (161) 415455 515 29.8 9.7 12.7 chr2 38123092 38123262 (205076111) + MamGypLTR2c LTR/Gypsy 908 1068 (0) 415455 575 31.3 5.5 3.8 chr2 38174849 38175147 (205024226) C MamGypLTR2c LTR/Gypsy (59) 1009 694 415537 497 28.4 12.1 6.0 chr2 38407719 38408066 (204791307) + MamGypLTR3 LTR/Gypsy 470 838 (1) 415831 690 27.6 4.6 2.2 chr2 38851791 38852072 (204347301) C LTR81C LTR/Gypsy (278) 911 604 416599 259 32.4 10.6 7.6 chr2 38875861 38876228 (204323145) + LTR81 LTR/Gypsy 804 1182 (7) 416651 253 13.1 2.1 2.1 chr2 39515825 39515871 (203683502) C LTR81B LTR/Gypsy (203) 1190 1144 417938 321 23.6 2.4 3.2 chr2 40071188 40071318 (203128055) + LTR81AB LTR/Gypsy 183 317 (1033) 418789 251 24.4 3.3 4.4 chr2 40072861 40072950 (203126423) + LTR81AB LTR/Gypsy 1075 1163 (187) 418789 804 32.6 7.7 3.8 chr2 40261681 40262280 (202937093) + MamGypLTR1a LTR/Gypsy 45 667 (117) 419016 342 28.2 9.9 7.3 chr2 40269915 40270147 (202929226) C MamGypLTR1c LTR/Gypsy (471) 332 94 419028 339 26.2 12.6 1.8 chr2 41879185 41879351 (201320022) + LTR81C LTR/Gypsy 15 199 (954) 421133 256 26.9 11.5 5.9 chr2 41957409 41957627 (201241746) C LTR81A LTR/Gypsy (845) 505 365 421263 250 32.0 0.6 15.5 chr2 42305221 42305394 (200893979) + MamGypLTR1c LTR/Gypsy 1 148 (655) 421804 367 31.3 6.4 8.1 chr2 43056570 43056927 (200142446) C LTR81B LTR/Gypsy (0) 1350 999 423251 441 28.7 2.7 6.7 chr2 43057445 43057668 (200141705) C LTR81B LTR/Gypsy (1145) 248 34 423251 695 24.6 7.0 3.7 chr2 43089539 43089827 (200109546) + LTR81AB LTR/Gypsy 29 332 (1018) 423307 252 31.4 5.0 0.8 chr2 43198249 43198367 (200001006) + LTR81C LTR/Gypsy 1 124 (154) 423486 293 34.3 10.1 7.3 chr2 43199196 43199481 (199999892) + LTR81C LTR/Gypsy 747 1040 (113) 423486 265 25.5 3.1 16.5 chr2 44290447 44290573 (198908800) + LTR81C LTR/Gypsy 832 941 (212) 425267 480 23.2 9.3 4.4 chr2 45274864 45275045 (197924328) C MamGypLTR1a LTR/Gypsy (0) 784 596 426865 412 32.7 6.3 15.9 chr2 46873920 46874490 (196324883) + MamGypLTR1c LTR/Gypsy 55 570 (233) 429147 237 32.4 4.1 5.4 chr2 46874524 46874670 (196324703) + MamGypLTR1c LTR/Gypsy 592 736 (77) 429147 226 24.5 11.3 0.0 chr2 46908605 46908657 (196290716) C MamGypLTR1d LTR/Gypsy (68) 745 687 429202 341 19.0 17.8 1.0 chr2 46909057 46909157 (196290216) C MamGypLTR1d LTR/Gypsy (679) 134 17 429202 616 28.4 24.5 3.0 chr2 47032418 47032853 (196166520) C LTR81B LTR/Gypsy (64) 1329 800 429382 236 30.9 5.2 3.1 chr2 47033089 47033185 (196166188) C LTR81B LTR/Gypsy (889) 264 166 429382 396 25.8 3.2 0.0 chr2 47033185 47033277 (196166096) C LTR81A LTR/Gypsy (1045) 305 210 429383 294 23.7 20.3 2.2 chr2 47318582 47318719 (195880654) + MamGypLTR1c LTR/Gypsy 6 168 (645) 429872 334 17.6 13.2 0.0 chr2 48135322 48135412 (195063961) C LTR81A LTR/Gypsy (0) 1350 1248 431503 1463 32.1 8.1 3.2 chr2 48135839 48136530 (195062843) C LTR81C LTR/Gypsy (419) 734 9 431506 294 24.5 19.5 7.9 chr2 48165416 48165707 (195033666) C LTR81A LTR/Gypsy (1) 1392 1067 431559 316 25.9 13.9 3.8 chr2 48166459 48166667 (195032706) C LTR81A LTR/Gypsy (925) 425 196 431559 313 24.7 6.9 0.6 chr2 48167412 48167582 (195031791) C LTR81A LTR/Gypsy (1199) 194 3 431559 712 30.0 1.2 12.8 chr2 48180572 48180741 (195018632) + LTR81B LTR/Gypsy 872 1035 (358) 431594 712 30.0 1.2 12.8 chr2 48181034 48181191 (195018182) + LTR81B LTR/Gypsy 1036 1162 (231) 431594 264 26.7 4.3 0.8 chr2 48272739 48272855 (194926518) + MamGypLTR2b LTR/Gypsy 785 905 (17) 431731 985 31.6 16.8 5.4 chr2 48341755 48342743 (194856630) C LTR81A LTR/Gypsy (4) 1389 288 431831 753 26.6 1.5 3.3 chr2 48366696 48366967 (194832406) C LTR81A LTR/Gypsy (1055) 295 29 431879 400 31.8 13.3 6.1 chr2 48412227 48412588 (194786785) C MamGypLTR1a LTR/Gypsy (276) 508 121 431948 621 25.2 14.5 5.4 chr2 48663256 48663586 (194535787) C LTR81C LTR/Gypsy (15) 1138 778 432384 937 32.0 7.5 10.3 chr2 48906845 48907475 (194291898) C MamGypLTR1b LTR/Gypsy (40) 742 130 432807 524 32.3 3.2 0.0 chr2 49003468 49003684 (194195689) + MamGypLTR1c LTR/Gypsy 571 794 (9) 432937 442 30.7 7.4 9.9 chr2 49031729 49032082 (194167291) + MamGypLTR1b LTR/Gypsy 404 750 (34) 432977 321 25.2 14.3 2.7 chr2 49049584 49049730 (194149643) + MamGypLTR1a LTR/Gypsy 585 748 (36) 433003 1255 28.1 16.5 4.6 chr2 49084253 49084966 (194114407) + MamGypLTR1c LTR/Gypsy 5 803 (0) 433039 240 30.9 14.2 11.9 chr2 49099840 49100302 (194099071) + MamGypLTR2c LTR/Gypsy 4 477 (591) 433058 319 24.8 7.9 0.0 chr2 49115788 49115888 (194083485) C MamGypLTR1b LTR/Gypsy (46) 736 628 433086 247 30.5 5.3 7.2 chr2 49155321 49155585 (194043788) C MamGypLTR2b LTR/Gypsy (21) 901 642 433131 320 29.9 4.8 4.9 chr2 49156028 49156250 (194043123) C LTR81A LTR/Gypsy (1127) 223 5 433132 240 30.7 1.6 6.6 chr2 49521897 49522018 (193677355) C MamGypLTR1b LTR/Gypsy (34) 748 633 433619 268 34.8 1.2 2.1 chr2 50701679 50701793 (192497580) + MamGypLTR1c LTR/Gypsy 380 494 (309) 435113 467 25.8 8.6 0.7 chr2 50702030 50702181 (192497192) + MamGypLTR1c LTR/Gypsy 631 794 (9) 435113 315 29.8 9.2 7.1 chr2 51470487 51470670 (191728703) C MamGypLTR1a LTR/Gypsy (596) 188 1 436147 430 35.8 10.6 4.6 chr2 51491662 51492086 (191707287) + MamGypLTR1b LTR/Gypsy 273 725 (57) 436170 430 35.8 10.6 4.6 chr2 51492399 51492452 (191706921) + MamGypLTR1b LTR/Gypsy 726 781 (1) 436170 267 39.2 8.2 3.2 chr2 51691095 51691410 (191507963) C LTR81B LTR/Gypsy (558) 835 504 436418 323 25.0 2.5 8.9 chr2 51691524 51691681 (191507692) C LTR81AB LTR/Gypsy (1) 277 130 436419 247 35.0 1.1 10.6 chr2 51972286 51972464 (191226909) C MamGypLTR3 LTR/Gypsy (57) 782 621 436770 278 28.3 6.5 0.0 chr2 52467594 52467685 (190731688) + LTR81A LTR/Gypsy 1232 1348 (45) 437389 338 25.7 6.3 4.9 chr2 53220423 53220565 (189978808) C MamGypLTR1c LTR/Gypsy (1) 921 669 438329 292 26.6 12.7 7.7 chr2 53700587 53700806 (189498567) + MamGypLTR3 LTR/Gypsy 560 790 (49) 438961 233 29.6 6.3 0.8 chr2 53706940 53707065 (189492308) C MamGypLTR1c LTR/Gypsy (0) 803 671 438972 243 24.7 6.0 3.6 chr2 53707481 53707564 (189491809) C MamGypLTR1c LTR/Gypsy (259) 544 459 438972 579 32.1 9.1 3.7 chr2 53744058 53744478 (189454895) C MamGypLTR1b LTR/Gypsy (13) 790 349 439038 312 31.1 5.3 8.6 chr2 53744519 53744761 (189454612) C MamGypLTR1b LTR/Gypsy (549) 235 1 439038 272 26.1 7.0 2.6 chr2 54414087 54414200 (188785173) + LTR81AB LTR/Gypsy 100 218 (60) 440259 928 33.3 9.2 3.8 chr2 54533317 54534030 (188665343) + MamGypLTR1b LTR/Gypsy 5 757 (25) 440455 245 30.9 5.6 0.9 chr2 55064023 55064130 (188135243) C MamGypLTR1a LTR/Gypsy (299) 485 373 441195 355 32.0 6.0 0.7 chr2 55307474 55307624 (187891749) + MamGypLTR1b LTR/Gypsy 623 781 (1) 441510 333 28.2 20.3 1.7 chr2 55686140 55686316 (187513057) + MamGypLTR1b LTR/Gypsy 387 596 (186) 442197 239 23.9 0.0 5.6 chr2 55939405 55939475 (187259898) + MamGypLTR2c LTR/Gypsy 78 144 (924) 442714 361 30.2 5.0 5.5 chr2 56378010 56378191 (186821182) C MamGypLTR3 LTR/Gypsy (2) 837 657 443287 632 31.6 5.8 1.9 chr2 56378531 56378790 (186820583) C MamGypLTR3 LTR/Gypsy (368) 471 202 443287 565 33.3 4.8 2.2 chr2 56868615 56868887 (186330486) C MamGypLTR1a LTR/Gypsy (480) 304 25 443871 308 33.8 5.0 4.4 chr2 56878640 56878936 (186320437) C LTR81A LTR/Gypsy (14) 1336 1038 443888 299 29.3 11.4 1.8 chr2 56879440 56879729 (186319644) C LTR81A LTR/Gypsy (892) 501 177 443888 321 32.1 15.5 1.6 chr2 57387746 57387932 (185811441) C MamGyp-int LTR/Gypsy (1398) 3664 3452 444476 334 42.1 3.0 3.7 chr2 57392688 57392956 (185806417) C MamGyp-int LTR/Gypsy (1780) 3282 3016 444476 405 34.7 8.5 6.4 chr2 58486044 58486272 (184713101) + MamGypLTR3 LTR/Gypsy 300 534 (305) 445776 405 34.7 8.5 6.4 chr2 58486490 58486588 (184712785) + MamGypLTR3 LTR/Gypsy 535 639 (200) 445776 405 34.7 8.5 6.4 chr2 58486914 58487005 (184712368) + MamGypLTR3 LTR/Gypsy 640 730 (109) 445776 302 29.7 1.6 4.1 chr2 59261650 59261772 (183937601) C LTR81B LTR/Gypsy (203) 1190 1061 446781 306 24.4 3.2 8.0 chr2 59344700 59344824 (183854549) + LTR81AB LTR/Gypsy 1 119 (159) 446888 269 28.3 4.0 3.2 chr2 59845327 59845450 (183353923) C MamGypLTR1c LTR/Gypsy (10) 793 669 447523 267 34.4 3.9 2.6 chr2 59852991 59853145 (183346228) + MamGypLTR1c LTR/Gypsy 56 212 (591) 447533 453 27.9 9.1 4.3 chr2 59853665 59853874 (183345499) + MamGypLTR1c LTR/Gypsy 584 803 (0) 447533 953 32.0 10.9 5.5 chr2 60096711 60097434 (183101939) + MamGypLTR1b LTR/Gypsy 8 770 (12) 447851 563 30.8 14.5 2.6 chr2 60164354 60164839 (183034534) + MamGypLTR1b LTR/Gypsy 5 573 (211) 447930 368 17.1 5.4 0.0 chr2 60478444 60478530 (182720843) C MamGypLTR1b LTR/Gypsy (686) 98 5 448302 327 24.4 2.2 14.8 chr2 60945369 60945430 (182253943) C MamGypLTR1d LTR/Gypsy (2) 811 754 448982 327 24.4 2.2 14.8 chr2 60945750 60945821 (182253552) C MamGypLTR1d LTR/Gypsy (60) 753 694 448982 464 19.3 8.3 0.0 chr2 61036276 61036384 (182162989) + MamGypLTR1a LTR/Gypsy 27 144 (640) 449181 1009 26.8 12.2 8.0 chr2 61036408 61036873 (182162500) + MamGypLTR1a LTR/Gypsy 230 724 (60) 449181 1009 26.8 12.2 8.0 chr2 61037185 61037241 (182162132) + MamGypLTR1a LTR/Gypsy 725 775 (9) 449181 405 28.9 2.5 0.0 chr2 61309608 61309674 (181889699) + MamGypLTR1d LTR/Gypsy 690 759 (54) 449678 405 28.9 2.5 0.0 chr2 61309969 61310021 (181889352) + MamGypLTR1d LTR/Gypsy 760 812 (1) 449678 492 24.5 8.3 17.0 chr2 61824771 61825070 (181374303) + MamGypLTR1a LTR/Gypsy 1 274 (510) 450761 251 19.7 4.3 4.3 chr2 62513865 62513933 (180685440) C MamGypLTR1b LTR/Gypsy (92) 690 622 452213 414 23.2 10.1 12.7 chr2 62632434 62632670 (180566703) C MamGypLTR1c LTR/Gypsy (537) 276 46 452478 229 18.9 1.9 1.9 chr2 62773807 62773860 (180425513) + MamGypLTR3 LTR/Gypsy 784 837 (2) 452680 369 24.2 5.3 3.8 chr2 62927381 62927513 (180271860) C MamGypLTR1c LTR/Gypsy (0) 803 669 452871 261 37.9 2.6 3.9 chr2 62928045 62928277 (180271096) C MamGypLTR2b LTR/Gypsy (692) 230 1 452873 265 27.7 9.6 2.9 chr2 62928619 62928722 (180270651) C MamGypLTR1c LTR/Gypsy (612) 201 91 452871 282 24.6 8.9 4.1 chr2 63901900 63902022 (179297351) C MamGypLTR2c LTR/Gypsy (66) 1002 874 454157 323 27.6 6.4 3.2 chr2 63902229 63902385 (179296988) C MamGypLTR2c LTR/Gypsy (494) 574 413 454157 288 30.2 8.9 4.2 chr2 64291775 64291988 (178907385) + LTR81C LTR/Gypsy 1 224 (1126) 454749 513 26.4 10.6 1.6 chr2 64292881 64293134 (178906239) + LTR81C LTR/Gypsy 877 1153 (0) 454749 479 32.3 14.4 5.0 chr2 64509522 64510042 (178689331) + MamGypLTR1c LTR/Gypsy 1 570 (233) 455067 307 31.4 10.6 0.6 chr2 64510054 64510223 (178689150) + MamGypLTR1c LTR/Gypsy 528 714 (89) 455067 1196 29.8 11.5 5.4 chr2 64514135 64514724 (178684649) C MamGypLTR1b LTR/Gypsy (5) 777 152 455076 430 15.7 7.7 2.2 chr2 64515140 64515230 (178684143) C MamGypLTR1b LTR/Gypsy (679) 103 8 455076 580 29.1 15.2 3.9 chr2 64524501 64524783 (178674590) C MamGypLTR1b LTR/Gypsy (58) 724 410 455100 238 20.2 3.6 14.6 chr2 64634012 64634121 (178565252) + LTR81B LTR/Gypsy 46 143 (1250) 455248 294 35.5 4.4 0.7 chr2 64717730 64717865 (178481508) + MamGypLTR1b LTR/Gypsy 296 436 (367) 455379 838 29.9 3.4 1.1 chr2 64718791 64719054 (178480319) + MamGypLTR1b LTR/Gypsy 507 776 (6) 455379 226 27.7 9.1 9.1 chr2 64845779 64845921 (178353452) C MamGypLTR1c LTR/Gypsy (41) 762 620 455582 273 19.8 3.9 14.4 chr2 65045186 65045338 (178154035) + MamGypLTR1c LTR/Gypsy 8 144 (669) 455905 289 22.2 4.8 1.2 chr2 65046217 65046344 (178153029) + MamGypLTR1c LTR/Gypsy 621 742 (61) 455905 241 37.3 0.0 1.2 chr2 65054090 65054173 (178145200) + MamGypLTR3 LTR/Gypsy 629 711 (128) 455923 433 30.3 12.7 5.7 chr2 65132394 65132708 (178066665) C MamGypLTR3 LTR/Gypsy (27) 812 476 456059 571 25.7 9.0 0.5 chr2 65141021 65141208 (178058165) C MamGypLTR1a LTR/Gypsy (3) 781 578 456081 241 18.8 14.1 2.8 chr2 65141410 65141480 (178057893) C MamGypLTR1a LTR/Gypsy (549) 235 157 456081 254 20.5 10.3 2.6 chr2 65179003 65179120 (178020253) + MamGypLTR1b LTR/Gypsy 679 801 (2) 456175 368 33.1 3.5 0.0 chr2 65203827 65203968 (177995405) + LTR81 LTR/Gypsy 543 689 (500) 456228 533 28.5 4.8 4.3 chr2 65207448 65207656 (177991717) + LTR81C LTR/Gypsy 914 1123 (30) 456242 835 30.4 14.7 4.8 chr2 65270024 65270548 (177928825) C MamGypLTR1a LTR/Gypsy (207) 577 1 456366 395 32.2 6.2 5.7 chr2 65522368 65522578 (177676795) C MamGypLTR1b LTR/Gypsy (85) 697 486 456888 373 22.9 11.3 0.9 chr2 65834407 65834512 (177364861) C MamGypLTR2c LTR/Gypsy (950) 118 2 457490 321 31.2 4.2 6.9 chr2 65975056 65975244 (177224129) C MamGypLTR2c LTR/Gypsy (116) 952 769 457687 423 30.2 2.4 4.3 chr2 65976374 65976581 (177222792) C LTR81A LTR/Gypsy (973) 377 174 457690 325 22.4 7.0 2.0 chr2 65976637 65976736 (177222637) C LTR81A LTR/Gypsy (157) 121 17 457690 289 21.4 1.9 7.5 chr2 66124230 66124335 (177075038) + MamGypLTR3 LTR/Gypsy 740 839 (0) 457901 243 30.7 8.1 3.2 chr2 67275295 67275479 (175923894) + MamGypLTR1b LTR/Gypsy 8 201 (581) 459309 333 29.1 10.7 7.3 chr2 67275976 67276264 (175923109) + MamGypLTR1b LTR/Gypsy 458 756 (26) 459309 352 25.0 1.1 1.1 chr2 67511841 67511933 (175687440) C LTR81C LTR/Gypsy (13) 1140 1048 459604 327 29.3 1.6 4.2 chr2 67512212 67512354 (175687019) C LTR81C LTR/Gypsy (950) 239 100 459604 329 33.8 2.2 0.8 chr2 67621027 67621160 (175578213) + MamGypLTR3 LTR/Gypsy 674 809 (30) 459766 253 26.3 0.0 1.3 chr2 67778875 67778951 (175420422) + MamGypLTR1d LTR/Gypsy 735 810 (3) 459979 300 29.7 6.5 4.0 chr2 67907565 67907764 (175291609) + LTR81 LTR/Gypsy 978 1182 (7) 460130 269 20.9 3.1 5.2 chr2 68031233 68031328 (175168045) + MamGypLTR2b LTR/Gypsy 792 885 (37) 460294 1077 30.7 6.3 10.7 chr2 68120436 68121579 (175077794) C LTR81B LTR/Gypsy (18) 1375 282 460424 278 28.9 28.3 0.7 chr2 68663539 68663824 (174535549) + LTR81B LTR/Gypsy 98 462 (931) 461289 293 29.1 7.1 4.5 chr2 68680611 68680808 (174518565) + LTR81AB LTR/Gypsy 17 219 (59) 461320 226 26.6 1.5 3.0 chr2 68681659 68681724 (174517649) + MamGypLTR2c LTR/Gypsy 136 200 (868) 461322 315 25.5 23.7 3.9 chr2 69257084 69257340 (173942033) C LTR81B LTR/Gypsy (4) 1389 1082 462076 693 22.5 9.8 6.3 chr2 69258850 69259134 (173940239) C LTR81B LTR/Gypsy (1096) 297 3 462076 360 36.5 8.4 2.2 chr2 69535881 69536286 (173663087) + MamGyp-int LTR/Gypsy 7 437 (4625) 462469 425 28.5 5.0 9.3 chr2 69940785 69941086 (173258287) C MamGypLTR1a LTR/Gypsy (444) 340 52 463218 820 32.6 9.7 6.4 chr2 70180193 70180828 (173018545) + MamGypLTR1a LTR/Gypsy 36 711 (73) 463672 820 32.6 9.7 6.4 chr2 70181150 70181227 (173018146) + MamGypLTR1a LTR/Gypsy 712 773 (11) 463672 290 25.3 1.3 0.0 chr2 70206039 70206117 (172993256) + MamGypLTR1a LTR/Gypsy 1 80 (704) 463710 355 28.3 13.7 0.0 chr2 70206809 70206968 (172992405) + MamGypLTR1a LTR/Gypsy 621 792 (11) 463710 339 26.9 10.7 0.8 chr2 70235411 70235541 (172963832) C MamGypLTR1c LTR/Gypsy (6) 797 654 463776 470 26.2 11.0 10.3 chr2 70235969 70236249 (172963124) C MamGypLTR1c LTR/Gypsy (519) 284 2 463776 234 31.0 7.8 2.8 chr2 70538099 70538277 (172661096) + MamGypLTR1c LTR/Gypsy 340 527 (276) 464473 623 28.9 1.3 0.3 chr2 70836353 70836532 (172362841) + MamGypLTR2c LTR/Gypsy 182 512 (556) 464944 312 27.5 2.0 6.1 chr2 70872810 70872956 (172326417) + MamGypLTR3 LTR/Gypsy 660 800 (39) 464986 653 26.3 14.8 3.4 chr2 71290505 71290768 (171908605) + MamGypLTR2b LTR/Gypsy 629 922 (0) 465582 283 32.4 8.3 5.6 chr2 71456296 71456511 (171742862) C LTR81C LTR/Gypsy (242) 911 809 465846 234 31.0 13.7 5.1 chr2 71458431 71458685 (171740688) + LTR81 LTR/Gypsy 856 1132 (57) 465850 473 22.8 0.9 1.7 chr2 71861676 71861791 (171337582) C MamGypLTR2b LTR/Gypsy (2) 920 806 466431 322 30.4 9.9 3.8 chr2 71861982 71862193 (171337180) C MamGypLTR2b LTR/Gypsy (441) 481 257 466431 475 31.9 15.6 0.6 chr2 73070287 73070466 (170128907) C MamGypLTR1b LTR/Gypsy (3) 779 573 468110 243 29.3 6.2 3.9 chr2 73070817 73070944 (170128429) C MamGypLTR1b LTR/Gypsy (648) 136 6 468110 361 30.5 6.0 12.1 chr2 73088944 73089457 (170109916) C MamGypLTR2b LTR/Gypsy (0) 922 440 468152 261 29.8 4.1 4.1 chr2 73553190 73553287 (169646086) C MamGyp-int LTR/Gypsy (2697) 2365 2268 468911 272 33.3 2.0 0.0 chr2 73553428 73553529 (169645844) C MamGyp-int LTR/Gypsy (2921) 2141 2038 468911 271 29.2 7.4 4.9 chr2 74317265 74317426 (168881947) C LTR81C LTR/Gypsy (31) 1122 957 470095 374 30.2 3.5 2.8 chr2 74563915 74564057 (168635316) + MamGypLTR1c LTR/Gypsy 5 148 (655) 470543 332 27.5 13.0 5.2 chr2 74793207 74793398 (168405975) + MamGypLTR1b LTR/Gypsy 547 753 (29) 470880 552 31.4 13.1 2.0 chr2 74910538 74911014 (168288359) + MamGypLTR1b LTR/Gypsy 256 784 (0) 471075 528 31.5 6.7 5.3 chr2 74959792 74960073 (168239300) C MamGypLTR1c LTR/Gypsy (517) 286 1 471153 315 25.5 11.2 0.0 chr2 75139061 75139158 (168060215) C MamGypLTR1b LTR/Gypsy (0) 782 674 471454 272 29.5 8.3 7.4 chr2 75241118 75241238 (167958135) C MamGypLTR1a LTR/Gypsy (65) 719 598 471609 458 35.2 4.4 5.0 chr2 75541313 75541695 (167657678) + MamGypLTR2c LTR/Gypsy 5 385 (683) 472026 225 33.3 5.7 1.4 chr2 75542797 75542936 (167656437) + LTR81 LTR/Gypsy 552 697 (492) 472030 393 28.9 1.3 4.4 chr2 75543100 75543258 (167656115) + MamGypLTR2c LTR/Gypsy 907 1060 (8) 472026 619 30.4 12.1 7.8 chr2 75797129 75797857 (167401516) C MamGypLTR1b LTR/Gypsy (22) 760 1 472399 678 22.2 22.9 3.2 chr2 75836032 75836422 (167362951) + MamGypLTR3 LTR/Gypsy 130 597 (242) 472449 248 22.2 0.0 1.8 chr2 75836517 75836571 (167362802) + MamGypLTR3 LTR/Gypsy 773 826 (13) 472449 251 22.9 14.3 1.2 chr2 75853027 75853110 (167346263) C MamGypLTR1d LTR/Gypsy (12) 791 697 472482 314 23.6 8.6 11.7 chr2 75853828 75853990 (167345383) C MamGypLTR1d LTR/Gypsy (644) 169 12 472482 256 34.1 4.3 2.7 chr2 75996028 75996214 (167203159) + MamGypLTR1c LTR/Gypsy 8 197 (606) 472706 335 18.5 4.9 0.0 chr2 75996826 75996906 (167202467) + MamGypLTR1c LTR/Gypsy 707 791 (12) 472709 284 27.6 10.0 7.1 chr2 76096198 76096536 (167102837) C LTR81B LTR/Gypsy (1039) 354 6 472847 1221 30.7 12.3 2.8 chr2 76115756 76116466 (167082907) C LTR81C LTR/Gypsy (60) 1093 315 472866 258 32.2 3.4 0.8 chr2 76116508 76116626 (167082747) C LTR81A LTR/Gypsy (899) 451 330 472867 463 30.5 11.6 5.1 chr2 76124006 76124281 (167075092) + LTR81B LTR/Gypsy 869 1162 (231) 472877 232 34.2 9.9 4.2 chr2 76233571 76233762 (166965611) + LTR81A LTR/Gypsy 919 1121 (229) 473008 370 27.8 2.2 0.8 chr2 77143862 77143995 (166055378) C MamGypLTR2b LTR/Gypsy (13) 909 774 474192 259 26.7 4.1 1.1 chr2 77223854 77223985 (165975388) + MamGypLTR2b LTR/Gypsy 667 922 (0) 474288 363 26.4 15.7 2.0 chr2 77831758 77831904 (165367469) C LTR81C LTR/Gypsy (19) 1134 968 475162 261 30.4 11.8 1.6 chr2 78131985 78132111 (165067262) C LTR81C LTR/Gypsy (47) 1303 1164 475570 540 36.0 14.7 2.3 chr2 78132109 78132788 (165066585) C LTR81C LTR/Gypsy (198) 1195 375 475570 262 26.2 1.2 2.3 chr2 78301253 78301338 (164898035) C LTR81 LTR/Gypsy (9) 1180 1096 475761 316 37.6 4.3 3.2 chr2 78603886 78604072 (164595301) + MamGypLTR3 LTR/Gypsy 557 745 (94) 476177 347 28.5 7.9 3.1 chr2 78692489 78692615 (164506758) + MamGypLTR1c LTR/Gypsy 647 779 (24) 476293 302 10.0 0.0 0.0 chr2 78748460 78748499 (164450874) + LTR81AB LTR/Gypsy 123 162 (116) 476373 319 7.3 0.0 0.0 chr2 78748632 78748672 (164450701) + LTR81AB LTR/Gypsy 152 192 (86) 476373 1202 31.3 5.7 3.8 chr2 78748985 78749618 (164449755) + LTR81B LTR/Gypsy 617 1262 (131) 476375 826 24.6 6.6 4.6 chr2 78763328 78763630 (164435743) + LTR81B LTR/Gypsy 1 309 (1084) 476394 366 32.7 2.9 2.3 chr2 78803411 78803582 (164395791) C MamGypLTR1b LTR/Gypsy (6) 776 604 476446 277 27.0 8.1 7.3 chr2 78803871 78803994 (164395379) C MamGypLTR1b LTR/Gypsy (657) 125 1 476446 365 26.0 8.8 5.7 chr2 78965233 78965460 (164233913) + LTR81AB LTR/Gypsy 42 276 (2) 476688 725 36.1 4.6 3.5 chr2 78965909 78966255 (164233118) + LTR81C LTR/Gypsy 312 662 (491) 476690 248 30.9 2.7 10.5 chr2 78966456 78966712 (164232661) + LTR81C LTR/Gypsy 870 1106 (47) 476690 330 36.1 4.3 4.0 chr2 79234324 79234652 (163964721) C LTR81C LTR/Gypsy (399) 754 425 477103 280 31.2 1.1 1.1 chr2 79449089 79449182 (163750191) + MamGypLTR3 LTR/Gypsy 188 281 (558) 477321 236 25.0 6.9 6.9 chr2 79449632 79449747 (163749626) + MamGypLTR3 LTR/Gypsy 724 839 (0) 477321 240 34.5 9.1 2.0 chr2 79902947 79903144 (163296229) C MamGypLTR1c LTR/Gypsy (31) 772 561 477929 438 29.9 19.2 4.6 chr2 80018576 80018877 (163180496) + MamGypLTR1a LTR/Gypsy 7 352 (432) 478091 672 33.8 0.8 0.4 chr2 80513141 80513384 (162685989) C MamGypLTR1b LTR/Gypsy (162) 620 376 478794 387 32.0 6.9 1.1 chr2 80922475 80922648 (162276725) C MamGypLTR3 LTR/Gypsy (0) 839 656 479358 610 31.9 10.4 5.0 chr2 80922672 80923074 (162276299) C MamGypLTR3 LTR/Gypsy (243) 596 172 479358 228 26.8 2.4 2.4 chr2 81204788 81204871 (161994502) C MamGypLTR3 LTR/Gypsy (55) 784 701 479725 363 28.7 2.6 2.6 chr2 81333275 81333467 (161865906) + MamGypLTR2b LTR/Gypsy 712 904 (18) 479850 231 31.2 2.6 0.0 chr2 81962945 81963021 (161236352) + LTR81C LTR/Gypsy 43 121 (157) 480639 258 35.8 4.7 2.9 chr2 81963415 81963584 (161235789) + LTR81C LTR/Gypsy 617 789 (604) 480639 310 29.9 10.3 0.0 chr2 81963940 81964056 (161235317) + LTR81C LTR/Gypsy 964 1092 (61) 480639 247 25.7 14.3 0.0 chr2 82396955 82397024 (160802349) + LTR81B LTR/Gypsy 1306 1385 (8) 481184 243 34.0 0.0 4.8 chr2 82815672 82815776 (160383597) + LTR81B LTR/Gypsy 971 1070 (323) 481765 248 27.2 2.9 8.8 chr2 83440190 83440326 (159759047) + LTR81AB LTR/Gypsy 41 169 (109) 482612 272 34.8 3.3 0.0 chr2 83704956 83705047 (159494326) + MamGypLTR3 LTR/Gypsy 633 727 (112) 482984 237 31.1 16.8 3.1 chr2 84057208 84057433 (159141940) C LTR81C LTR/Gypsy (7) 1146 890 483454 274 32.4 2.8 0.7 chr2 84427132 84427274 (158772099) + LTR81AB LTR/Gypsy 131 276 (2) 483955 573 17.4 13.1 0.7 chr2 84502473 84502617 (158696756) + MamGypLTR2b LTR/Gypsy 697 859 (63) 484035 686 35.5 8.9 7.8 chr2 84814651 84815746 (158383627) C LTR81C LTR/Gypsy (41) 1112 5 484429 953 29.1 5.9 2.7 chr2 84990381 84990751 (158208622) C LTR81C LTR/Gypsy (17) 1136 754 484652 335 31.4 8.9 3.1 chr2 85034446 85034780 (158164593) C LTR81B LTR/Gypsy (17) 1376 812 484703 251 29.4 0.0 5.6 chr2 85035132 85035239 (158164134) C LTR81B LTR/Gypsy (160) 118 17 484703 352 27.3 10.0 2.4 chr2 85122084 85122293 (158077080) C LTR81C LTR/Gypsy (144) 1009 784 484850 279 28.4 13.8 3.1 chr2 85151336 85151495 (158047878) C MamGypLTR1a LTR/Gypsy (416) 368 192 484930 909 29.1 18.4 3.5 chr2 85883010 85883732 (157315641) C MamGypLTR2c LTR/Gypsy (44) 1024 167 486418 909 29.1 18.4 3.5 chr2 85884317 85884455 (157314918) C MamGypLTR2c LTR/Gypsy (902) 166 33 486418 327 27.5 6.2 7.3 chr2 86041789 86041983 (157157390) C MamGypLTR1b LTR/Gypsy (28) 785 592 486713 228 35.9 8.8 4.2 chr2 86148490 86148639 (157050734) C MamGypLTR3 LTR/Gypsy (373) 466 303 486899 228 35.9 8.8 4.2 chr2 86149263 86149396 (157049977) C MamGypLTR3 LTR/Gypsy (537) 302 170 486899 450 28.0 4.5 13.4 chr2 86230426 86230681 (156968692) + MamGypLTR3 LTR/Gypsy 496 729 (110) 487050 450 28.0 4.5 13.4 chr2 86230971 86231026 (156968347) + MamGypLTR3 LTR/Gypsy 730 780 (59) 487050 312 23.1 3.2 2.1 chr2 86900120 86900212 (156299161) C MamGypLTR1b LTR/Gypsy (36) 746 653 488126 424 23.6 15.8 6.7 chr2 87546518 87546726 (155652647) C LTR81C LTR/Gypsy (15) 1138 911 489174 312 24.8 2.4 15.1 chr2 87762225 87762390 (155436983) C MamGypLTR1b LTR/Gypsy (2) 780 636 489448 279 31.9 4.6 7.5 chr2 87843211 87843282 (155356091) C MamGypLTR2c LTR/Gypsy (31) 1037 973 489543 279 31.9 4.6 7.5 chr2 87843642 87843849 (155355524) C MamGypLTR2c LTR/Gypsy (96) 972 765 489543 305 40.2 4.0 2.8 chr2 88204581 88204833 (154994540) + LTR81A LTR/Gypsy 782 1037 (313) 490072 273 26.7 4.0 6.5 chr2 88509656 88509779 (154689594) C LTR81B LTR/Gypsy (266) 1127 1007 490637 225 28.2 3.5 2.3 chr2 89376486 89376572 (153822801) C MamGypLTR2c LTR/Gypsy (665) 403 316 492101 243 30.4 1.2 1.2 chr2 89494484 89494563 (153704810) C MamGypLTR2c LTR/Gypsy (675) 393 314 492231 270 31.5 3.5 3.5 chr2 89516549 89516663 (153682710) C MamGypLTR3 LTR/Gypsy (517) 322 208 492255 225 35.5 1.3 0.0 chr2 89543199 89543274 (153656099) C MamGypLTR2c LTR/Gypsy (675) 393 317 492280 262 33.0 1.9 1.9 chr2 89590999 89591103 (153608270) C MamGypLTR3 LTR/Gypsy (527) 312 208 492344 237 32.5 1.7 1.7 chr2 89604122 89604237 (153595136) C MamGypLTR3 LTR/Gypsy (516) 323 208 492367 237 32.5 1.7 1.7 chr2 89916796 89916911 (153282462) + MamGypLTR3 LTR/Gypsy 208 323 (516) 492452 262 33.0 1.9 1.9 chr2 89929948 89930052 (153269321) + MamGypLTR3 LTR/Gypsy 208 312 (527) 492475 235 31.5 3.5 3.5 chr2 90004393 90004507 (153194866) + MamGypLTR3 LTR/Gypsy 208 322 (517) 492561 243 30.4 1.2 1.2 chr2 90026511 90026590 (153172783) + MamGypLTR2c LTR/Gypsy 314 393 (675) 492585 225 28.2 3.5 2.3 chr2 90162347 90162433 (153036940) + MamGypLTR2c LTR/Gypsy 316 403 (665) 492731 382 32.6 6.2 5.3 chr2 95513035 95513261 (147686112) + MamGypLTR3 LTR/Gypsy 497 725 (114) 494588 418 29.9 11.3 2.9 chr2 96052085 96052322 (147147051) + MamGypLTR1b LTR/Gypsy 4 261 (521) 495321 248 34.5 4.9 5.9 chr2 96645781 96645983 (146553390) + MamGypLTR3 LTR/Gypsy 497 697 (142) 496081 261 34.0 4.9 5.9 chr2 97790761 97790963 (145408410) C MamGypLTR3 LTR/Gypsy (142) 697 497 497947 299 27.9 8.5 3.7 chr2 97969232 97969395 (145229978) + MamGypLTR1c LTR/Gypsy 326 497 (306) 498128 314 27.9 8.5 3.7 chr2 98069501 98069664 (145129709) C MamGypLTR1c LTR/Gypsy (306) 497 326 498270 286 33.5 4.9 5.9 chr2 98194754 98194956 (145004417) + MamGypLTR3 LTR/Gypsy 497 697 (142) 498420 311 27.4 10.8 2.9 chr2 98628950 98629088 (144570285) C MamGypLTR1c LTR/Gypsy (18) 785 636 499009 232 29.8 5.6 1.6 chr2 98698497 98698622 (144500751) + MamGypLTR1c LTR/Gypsy 63 193 (610) 499119 520 36.4 3.2 3.2 chr2 98757308 98757622 (144441751) C MamGyp-int LTR/Gypsy (3579) 1483 1169 499189 311 27.1 3.9 7.7 chr2 98757640 98757695 (144441678) C MamGyp-int LTR/Gypsy (4657) 405 355 499189 311 27.1 3.9 7.7 chr2 98758109 98758155 (144441218) C MamGyp-int LTR/Gypsy (4708) 354 306 499189 679 29.5 12.8 1.6 chr2 98758402 98759069 (144440304) C MamGypLTR1d LTR/Gypsy (1) 812 49 499191 297 30.2 12.7 0.7 chr2 100212252 100212401 (142986972) + LTR81A LTR/Gypsy 792 959 (391) 501264 226 34.2 5.0 10.8 chr2 100777204 100777300 (142422073) C MamGypLTR1c LTR/Gypsy (380) 423 329 502020 226 34.2 5.0 10.8 chr2 100777770 100777930 (142421443) C MamGypLTR1c LTR/Gypsy (475) 328 181 502020 251 32.3 6.0 2.3 chr2 100778154 100778286 (142421087) C MamGypLTR1c LTR/Gypsy (621) 182 45 502020 331 30.7 11.1 8.1 chr2 101258496 101258828 (141940545) + MamGypLTR1b LTR/Gypsy 371 713 (69) 502776 257 24.2 1.5 0.0 chr2 101929243 101929308 (141270065) C MamGypLTR1a LTR/Gypsy (1) 783 717 503866 316 27.3 9.5 6.1 chr2 101930053 101930200 (141269173) C MamGypLTR1a LTR/Gypsy (623) 161 9 503866 287 29.4 12.3 4.1 chr2 102097622 102097816 (141101557) + LTR81B LTR/Gypsy 1077 1287 (106) 504117 310 23.4 2.6 1.3 chr2 102588516 102588592 (140610781) + MamGypLTR1b LTR/Gypsy 685 762 (20) 504897 232 30.4 7.3 3.7 chr2 102614223 102614304 (140585069) C MamGypLTR1d LTR/Gypsy (420) 393 309 504940 559 29.9 6.4 5.2 chr2 102614337 102614569 (140584804) C LTR81C LTR/Gypsy (916) 237 2 504941 415 29.5 4.6 5.7 chr2 102684152 102684242 (140515131) C MamGypLTR2c LTR/Gypsy (42) 1026 936 505046 415 29.5 4.6 5.7 chr2 102684926 102685027 (140514346) C MamGypLTR2c LTR/Gypsy (133) 935 835 505046 258 30.2 5.8 8.1 chr2 102685152 102685374 (140513999) C MamGypLTR2c LTR/Gypsy (535) 533 316 505046 232 20.3 23.0 0.0 chr2 102685473 102685546 (140513827) C MamGypLTR2c LTR/Gypsy (959) 109 19 505049 250 24.4 18.9 0.0 chr2 102738067 102738156 (140461217) C MamGypLTR2c LTR/Gypsy (956) 112 6 505119 1067 26.8 18.3 8.7 chr2 102755286 102755956 (140443417) C MamGypLTR2c LTR/Gypsy (36) 1032 305 505140 1067 27.9 20.1 8.9 chr2 102756384 102756666 (140442707) C MamGypLTR2c LTR/Gypsy (764) 304 4 505140 539 28.7 7.6 2.0 chr2 103606947 103607287 (139592086) + LTR81AB LTR/Gypsy 1 364 (986) 506210 297 34.7 7.3 6.5 chr2 105055210 105055579 (138143794) + LTR81 LTR/Gypsy 817 1189 (0) 507936 228 38.6 2.8 2.8 chr2 105619065 105619208 (137580165) + LTR81 LTR/Gypsy 370 513 (676) 508623 328 23.9 3.7 2.6 chr2 105950816 105950939 (137248434) C MamGypLTR2b LTR/Gypsy (27) 895 802 509138 326 26.9 7.3 3.2 chr2 105951018 105951140 (137248233) C MamGypLTR1c LTR/Gypsy (152) 651 524 509139 264 28.8 0.0 0.0 chr2 106064138 106064203 (137135170) C MamGypLTR1d LTR/Gypsy (0) 813 748 509304 395 27.0 7.8 3.9 chr2 106082959 106083112 (137116261) + MamGypLTR2b LTR/Gypsy 739 898 (24) 509340 240 34.6 0.0 0.9 chr2 106232974 106233078 (136966295) C MamGypLTR3 LTR/Gypsy (33) 806 703 509570 330 24.8 5.5 2.8 chr2 106233412 106233556 (136965817) C MamGypLTR3 LTR/Gypsy (555) 284 136 509572 642 30.8 9.1 3.5 chr2 106244028 106244346 (136955027) + MamGypLTR1b LTR/Gypsy 418 754 (28) 509590 330 28.3 2.1 1.1 chr2 106284022 106284114 (136915259) C MamGypLTR2c LTR/Gypsy (42) 1026 933 509636 259 33.8 0.0 1.3 chr2 106284756 106284830 (136914543) C MamGypLTR2c LTR/Gypsy (651) 417 344 509636 281 20.6 0.0 1.4 chr2 107259102 107259170 (135940203) C LTR81B LTR/Gypsy (1205) 188 121 511087 262 27.9 5.1 0.0 chr2 108269866 108269944 (134929429) + MamGypLTR2c LTR/Gypsy 457 539 (529) 512407 437 26.5 4.7 2.9 chr2 108273856 108274026 (134925347) C MamGypLTR2b LTR/Gypsy (19) 903 730 512413 337 26.6 5.5 6.5 chr2 109025132 109025348 (134174025) C MamGypLTR2b LTR/Gypsy (12) 910 696 513434 283 27.4 8.2 8.6 chr2 109662211 109662454 (133536919) + LTR81C LTR/Gypsy 896 1138 (15) 514414 310 25.6 15.2 0.8 chr2 109736431 109736548 (133462825) C MamGypLTR3 LTR/Gypsy (49) 790 656 514536 231 10.0 2.4 2.4 chr2 110288298 110288338 (132911035) C LTR81A LTR/Gypsy (1174) 176 136 515006 255 22.3 4.1 8.2 chr2 110482304 110482425 (132716948) + LTR81B LTR/Gypsy 66 182 (1211) 515379 279 31.9 4.6 7.5 chr2 112164060 112164267 (131035106) + MamGypLTR2c LTR/Gypsy 765 972 (96) 517597 279 31.9 4.6 7.5 chr2 112164627 112164698 (131034675) + MamGypLTR2c LTR/Gypsy 973 1037 (31) 517597 339 22.7 2.4 15.1 chr2 112245224 112245389 (130953984) + MamGypLTR1b LTR/Gypsy 636 780 (2) 517692 424 23.6 15.8 6.7 chr2 112299593 112299801 (130899572) + LTR81C LTR/Gypsy 911 1138 (15) 517757 298 32.1 0.0 0.0 chr2 112775567 112775647 (130423726) + MamGypLTR3 LTR/Gypsy 751 831 (8) 518476 599 27.7 7.7 9.9 chr2 112778109 112778461 (130420912) C MamGypLTR3 LTR/Gypsy (8) 831 487 518481 273 24.1 12.1 0.0 chr2 113029406 113029488 (130169885) C MamGypLTR1d LTR/Gypsy (72) 741 649 518873 320 27.8 23.9 2.2 chr2 113100596 113100871 (130098502) + LTR81A LTR/Gypsy 118 453 (897) 518982 250 25.0 12.3 4.3 chr2 113101378 113101515 (130097858) + LTR81A LTR/Gypsy 1224 1372 (21) 518982 247 29.6 7.9 1.6 chr2 113476058 113476184 (129723189) + MamGypLTR2b LTR/Gypsy 755 889 (33) 519648 420 26.9 2.8 5.0 chr2 113640435 113640614 (129558759) C MamGypLTR2b LTR/Gypsy (56) 866 691 519915 348 28.6 10.0 2.6 chr2 113640913 113641091 (129558282) C MamGypLTR2b LTR/Gypsy (676) 392 116 519915 265 36.5 1.0 2.0 chr2 113719174 113719271 (129480102) C MamGyp-int LTR/Gypsy (4926) 136 40 520043 268 22.6 8.7 8.7 chr2 113726688 113726813 (129472560) + MamGypLTR1b LTR/Gypsy 629 754 (28) 520058 498 33.7 5.2 4.4 chr2 114428855 114429198 (128770175) + MamGypLTR2c LTR/Gypsy 635 981 (87) 521104 353 29.8 2.6 0.9 chr2 114431818 114431932 (128767441) + MamGyp-int LTR/Gypsy 687 803 (4259) 521108 267 30.3 9.7 1.4 chr2 114729063 114729206 (128470167) C MamGypLTR1b LTR/Gypsy (7) 796 641 521675 346 26.8 6.3 1.2 chr2 114729321 114729470 (128469903) C MamGypLTR1b LTR/Gypsy (328) 475 314 521675 276 29.5 6.1 1.8 chr2 114729918 114730031 (128469342) C MamGypLTR1b LTR/Gypsy (663) 119 1 521675 363 33.2 13.9 1.9 chr2 114832329 114832595 (128366778) C MamGypLTR1b LTR/Gypsy (33) 749 451 521819 619 26.5 9.1 2.7 chr2 114877928 114878148 (128321225) + MamGypLTR1c LTR/Gypsy 13 247 (566) 521878 419 31.5 6.1 4.1 chr2 114924249 114924493 (128274880) + MamGypLTR1b LTR/Gypsy 525 774 (8) 521949 241 27.4 0.0 1.4 chr2 115076374 115076447 (128122926) + MamGypLTR1b LTR/Gypsy 1 73 (709) 522170 301 26.9 4.1 2.5 chr2 115174442 115174563 (128024810) + MamGypLTR3 LTR/Gypsy 106 229 (610) 522304 230 24.1 13.5 2.2 chr2 115176445 115176533 (128022840) + MamGypLTR3 LTR/Gypsy 725 823 (16) 522304 266 34.0 3.3 4.8 chr2 117570811 117571020 (125628353) C LTR81C LTR/Gypsy (338) 815 609 525448 230 35.8 5.2 2.1 chr2 117571240 117571336 (125628037) C MamGypLTR2c LTR/Gypsy (654) 414 315 525450 260 26.6 14.1 9.5 chr2 117887251 117887512 (125311861) C LTR81B LTR/Gypsy (1107) 286 13 525857 408 24.4 5.3 0.0 chr2 117953827 117953957 (125245416) + MamGypLTR2b LTR/Gypsy 775 912 (10) 525951 244 28.4 6.7 1.9 chr2 118426822 118426925 (124772448) C MamGypLTR1c LTR/Gypsy (13) 790 682 526493 512 31.7 8.3 3.0 chr2 118448325 118448626 (124750747) + MamGypLTR3 LTR/Gypsy 522 839 (0) 526524 264 38.1 1.3 2.5 chr2 118497412 118497570 (124701803) C MamGypLTR1b LTR/Gypsy (185) 597 441 526603 307 30.3 4.2 11.5 chr2 119959508 119959768 (123239605) + MamGypLTR1b LTR/Gypsy 53 294 (488) 528725 286 27.8 2.8 0.9 chr2 119960017 119960125 (123239248) + MamGypLTR1b LTR/Gypsy 639 749 (33) 528725 242 32.4 11.9 1.4 chr2 120046482 120046691 (123152682) C MamGypLTR1a LTR/Gypsy (549) 235 4 528880 258 34.1 3.2 4.3 chr2 120155192 120155378 (123043995) + LTR81C LTR/Gypsy 911 1095 (58) 529055 484 27.6 15.2 2.0 chr2 120233973 120234216 (122965157) + MamGypLTR3 LTR/Gypsy 544 819 (20) 529214 278 28.1 16.4 4.1 chr2 120242323 120242615 (122956758) + MamGypLTR1c LTR/Gypsy 159 487 (316) 529232 257 23.1 14.3 0.0 chr2 120265097 120265187 (122934186) + MamGypLTR1a LTR/Gypsy 679 782 (2) 529267 426 25.3 13.1 8.0 chr2 120458695 120458969 (122740404) + MamGypLTR1c LTR/Gypsy 45 333 (470) 529571 376 26.8 8.3 10.1 chr2 120460013 120460240 (122739133) + MamGypLTR1c LTR/Gypsy 552 775 (28) 529571 516 33.4 13.0 2.4 chr2 121226915 121227245 (121972128) + MamGypLTR1a LTR/Gypsy 4 369 (415) 530767 262 25.7 6.7 5.0 chr2 121305551 121305669 (121893704) + MamGypLTR1b LTR/Gypsy 625 745 (37) 530904 598 27.6 10.7 3.7 chr2 121323225 121323551 (121875822) C LTR81A LTR/Gypsy (1000) 350 1 530944 523 30.1 1.9 2.9 chr2 121790109 121790317 (121409056) + MamGypLTR2b LTR/Gypsy 692 898 (24) 531640 273 33.0 4.1 7.1 chr2 121931700 121931838 (121267535) + MamGypLTR1d LTR/Gypsy 619 758 (55) 531902 273 33.0 4.1 7.1 chr2 121932137 121932192 (121267181) + MamGypLTR1d LTR/Gypsy 759 808 (5) 531902 450 27.7 11.9 3.1 chr2 122534278 122534504 (120664869) C MamGypLTR2b LTR/Gypsy (0) 922 676 532979 240 26.1 1.4 1.4 chr2 122575153 122575222 (120624151) + LTR81B LTR/Gypsy 264 333 (1060) 533063 706 24.0 3.8 5.9 chr2 122622291 122622578 (120576795) C LTR81B LTR/Gypsy (1109) 284 3 533155 762 23.4 3.1 2.0 chr2 122654403 122654598 (120544775) C MamGypLTR1c LTR/Gypsy (605) 198 1 533206 352 25.4 19.0 2.9 chr2 122698637 122698846 (120500527) C LTR81AB LTR/Gypsy (924) 426 179 533303 370 20.2 10.4 1.9 chr2 122698865 122698970 (120500403) C LTR81AB LTR/Gypsy (159) 119 5 533303 267 29.2 4.1 6.2 chr2 122966582 122966727 (120232646) C LTR81C LTR/Gypsy (920) 233 91 533688 326 31.9 15.6 2.1 chr2 123026487 123026723 (120172650) + MamGypLTR1d LTR/Gypsy 152 420 (393) 533780 548 35.6 6.7 3.2 chr2 123236402 123236714 (119962659) C MamGypLTR1b LTR/Gypsy (51) 731 408 534090 231 34.6 17.9 2.4 chr2 123628909 123629204 (119570169) + LTR81 LTR/Gypsy 776 1329 (64) 534629 306 22.7 1.3 2.6 chr2 123644638 123644714 (119554659) + LTR81B LTR/Gypsy 195 270 (1123) 534652 365 27.7 3.0 8.4 chr2 124456369 124456597 (118742776) + MamGypLTR1d LTR/Gypsy 589 813 (0) 535712 459 27.6 22.3 5.4 chr2 125456034 125456401 (117742972) C MamGypLTR1b LTR/Gypsy (1) 783 354 537124 454 23.7 14.1 2.6 chr2 125456704 125456859 (117742514) C MamGypLTR1b LTR/Gypsy (608) 174 1 537124 245 31.9 3.4 2.0 chr2 127341275 127341421 (115857952) + LTR81A LTR/Gypsy 1032 1180 (170) 539658 365 23.1 8.1 2.7 chr2 127341430 127341540 (115857833) + LTR81C LTR/Gypsy 1031 1147 (6) 539659 344 13.8 1.5 0.0 chr2 127523771 127523835 (115675538) C MamGypLTR2b LTR/Gypsy (58) 864 799 539914 231 32.9 8.1 7.4 chr2 127878539 127878686 (115320687) C MamGypLTR2b LTR/Gypsy (723) 199 51 540408 310 25.2 4.3 7.1 chr2 129018594 129018734 (114180639) + LTR81AB LTR/Gypsy 132 268 (10) 542424 250 25.9 13.9 0.0 chr2 129083057 129083164 (114116209) C LTR81A LTR/Gypsy (53) 1340 1218 542479 564 25.0 13.9 0.9 chr2 129083945 129084174 (114115199) C LTR81A LTR/Gypsy (1072) 278 19 542479 362 31.7 6.9 5.8 chr2 129226882 129227055 (113972318) C MamGypLTR3 LTR/Gypsy (183) 656 481 542687 355 30.8 7.8 3.6 chr2 129254261 129254582 (113944791) + MamGypLTR2c LTR/Gypsy 34 324 (744) 542726 240 18.2 21.8 0.0 chr2 129254606 129254660 (113944713) + MamGypLTR2c LTR/Gypsy 824 890 (178) 542727 391 29.8 18.0 3.1 chr2 129471111 129471432 (113727941) C MamGypLTR1b LTR/Gypsy (43) 739 370 543038 252 31.7 15.4 2.2 chr2 130238532 130238829 (112960544) C MamGypLTR2c LTR/Gypsy (700) 368 14 543913 230 36.4 8.8 3.3 chr2 130478183 130478364 (112721009) + MamGypLTR1b LTR/Gypsy 538 729 (53) 544179 338 34.4 3.9 4.6 chr2 130867572 130867830 (112331543) + MamGypLTR3 LTR/Gypsy 546 802 (37) 544739 342 34.0 3.9 4.6 chr2 131256114 131256372 (111943001) + MamGypLTR3 LTR/Gypsy 546 802 (37) 545272 408 34.0 3.9 4.6 chr2 131379461 131379719 (111819654) C MamGypLTR3 LTR/Gypsy (37) 802 546 545448 338 34.4 3.9 4.6 chr2 131986238 131986496 (111212877) C MamGypLTR3 LTR/Gypsy (37) 802 546 546381 472 32.1 3.9 5.9 chr2 132359420 132359674 (110839699) C MamGypLTR3 LTR/Gypsy (44) 795 546 546827 900 27.5 1.7 4.2 chr2 133181886 133182186 (110017187) + LTR81AB LTR/Gypsy 4 301 (1049) 547908 351 30.2 8.7 7.2 chr2 133186375 133186581 (110012792) C MamGypLTR1b LTR/Gypsy (0) 803 592 547915 394 30.2 10.4 1.2 chr2 133271578 133271841 (109927532) C LTR81B LTR/Gypsy (255) 1138 628 548005 607 29.8 5.6 10.9 chr2 133272009 133272592 (109926781) C LTR81B LTR/Gypsy (825) 568 19 548005 328 35.3 3.3 4.1 chr2 134562152 134562294 (108637079) C MamGypLTR3 LTR/Gypsy (17) 822 678 549715 328 35.3 3.3 4.1 chr2 134562727 134562824 (108636549) C MamGypLTR3 LTR/Gypsy (162) 677 583 549715 241 30.7 4.4 2.2 chr2 134565654 134565743 (108633630) + MamGypLTR1d LTR/Gypsy 40 131 (682) 549718 1026 27.6 13.3 5.0 chr2 134583734 134584348 (108615025) + LTR81B LTR/Gypsy 710 1375 (18) 549745 264 30.1 6.2 2.0 chr2 134619652 134619797 (108579576) C MamGypLTR1b LTR/Gypsy (7) 775 624 549807 454 27.2 16.0 6.6 chr2 134656246 134656595 (108542778) + MamGypLTR1a LTR/Gypsy 359 741 (43) 549854 567 26.7 7.4 2.3 chr2 134702015 134702229 (108497144) C MamGypLTR1d LTR/Gypsy (0) 813 588 549924 431 18.9 15.3 0.0 chr2 134747518 134747628 (108451745) + LTR81B LTR/Gypsy 89 216 (1177) 549988 285 27.7 10.5 6.6 chr2 134748121 134748385 (108450988) + LTR81B LTR/Gypsy 754 1256 (137) 549989 445 24.5 8.4 8.0 chr2 135535368 135535580 (107663793) + LTR81AB LTR/Gypsy 35 248 (30) 551096 267 33.3 16.2 0.7 chr2 135535896 135536037 (107663336) + LTR81C LTR/Gypsy 515 678 (475) 551097 263 24.8 8.7 7.1 chr2 135579979 135580104 (107619269) C MamGypLTR2c LTR/Gypsy (726) 342 215 551180 436 30.8 14.6 4.1 chr2 137090283 137090844 (106108529) + MamGypLTR1b LTR/Gypsy 1 621 (161) 553654 482 25.5 4.8 5.4 chr2 137289828 137289993 (105909380) + MamGypLTR2c LTR/Gypsy 845 1009 (59) 553976 259 20.6 0.0 4.5 chr2 137578831 137578896 (105620477) C LTR81C LTR/Gypsy (112) 1041 979 554356 577 30.5 12.5 5.2 chr2 137595956 137596394 (105602979) C LTR81C LTR/Gypsy (0) 1153 683 554379 318 30.5 4.9 7.4 chr2 137596912 137597155 (105602218) C LTR81C LTR/Gypsy (977) 373 136 554379 351 33.9 15.6 3.1 chr2 137772812 137773131 (105426242) C MamGypLTR1a LTR/Gypsy (31) 753 394 554602 288 26.0 9.8 2.0 chr2 137800709 137800810 (105398563) C MamGypLTR1d LTR/Gypsy (0) 813 704 554646 287 29.2 4.9 7.1 chr2 137801225 137801408 (105397965) C MamGypLTR1d LTR/Gypsy (608) 195 16 554646 274 24.7 9.1 5.2 chr2 137850560 137850713 (105348660) C LTR81A LTR/Gypsy (1184) 166 7 554698 258 26.5 10.2 9.9 chr2 137980108 137980400 (105218973) + LTR81B LTR/Gypsy 10 303 (1090) 554861 543 34.6 9.5 2.4 chr2 138113552 138113963 (105085410) C MamGypLTR3 LTR/Gypsy (212) 627 187 555040 535 34.2 3.3 6.0 chr2 138141864 138142162 (105057211) + LTR81C LTR/Gypsy 14 304 (849) 555065 404 30.6 13.9 4.8 chr2 138142558 138142866 (105056507) + LTR81C LTR/Gypsy 742 1078 (75) 555065 1052 35.6 12.0 3.1 chr2 138696979 138697992 (104501381) C LTR81 LTR/Gypsy (0) 1189 80 555793 1052 35.6 12.0 3.1 chr2 138698357 138698433 (104500940) C LTR81 LTR/Gypsy (1110) 79 1 555793 230 22.4 11.9 1.8 chr2 138972509 138972617 (104226756) + MamGypLTR1a LTR/Gypsy 653 772 (12) 556159 963 30.3 8.0 5.8 chr2 139110910 139111026 (104088347) + MamGypLTR3 LTR/Gypsy 121 244 (595) 556360 963 30.3 8.0 5.8 chr2 139111469 139111914 (104087459) + MamGypLTR3 LTR/Gypsy 245 696 (143) 556360 260 33.5 13.9 3.6 chr2 139145876 139146184 (104053189) + MamGypLTR2b LTR/Gypsy 524 864 (58) 556415 593 26.9 3.9 3.6 chr2 139146776 139146992 (104052381) C MamGypLTR1c LTR/Gypsy (7) 796 567 556416 404 22.3 11.7 4.8 chr2 139639310 139639497 (103559876) + LTR81A LTR/Gypsy 109 310 (1040) 557118 275 21.7 7.2 0.0 chr2 139640049 139640131 (103559242) + MamGypLTR2c LTR/Gypsy 875 963 (105) 557119 248 27.7 11.7 1.9 chr2 140018101 140018203 (103181170) C MamGypLTR1d LTR/Gypsy (7) 806 694 557603 249 37.8 1.7 0.8 chr2 140433919 140434038 (102765335) C MamGypLTR1c LTR/Gypsy (308) 495 375 558111 449 24.3 1.3 9.9 chr2 140441254 140441486 (102757887) + LTR81B LTR/Gypsy 102 314 (1079) 558128 380 32.4 9.4 5.7 chr2 140442215 140442545 (102756828) + LTR81C LTR/Gypsy 808 1150 (3) 558129 297 28.1 7.6 3.5 chr2 140611967 140612110 (102587263) + MamGypLTR1c LTR/Gypsy 1 150 (653) 558385 364 27.5 3.8 5.1 chr2 140701795 140701951 (102497422) + LTR81C LTR/Gypsy 82 236 (917) 558502 502 28.4 3.4 8.0 chr2 140829210 140829473 (102369900) C MamGypLTR2b LTR/Gypsy (0) 922 671 558685 304 34.9 18.7 4.1 chr2 141194209 141194578 (102004795) + LTR81A LTR/Gypsy 101 524 (629) 559152 361 28.5 7.1 6.5 chr2 141194723 141194877 (102004496) + LTR81A LTR/Gypsy 955 1084 (266) 559152 246 34.4 9.6 1.8 chr2 141399280 141399445 (101799928) + LTR81A LTR/Gypsy 44 222 (1128) 559419 264 32.0 0.0 2.5 chr2 141538748 141538827 (101660546) + MamGypLTR1b LTR/Gypsy 485 562 (220) 559617 359 20.2 5.3 1.1 chr2 142079675 142079769 (101119604) + LTR81AB LTR/Gypsy 18 116 (162) 560383 254 26.5 6.0 2.0 chr2 142565162 142565261 (100634112) C MamGypLTR1d LTR/Gypsy (3) 810 707 561045 251 29.1 0.0 4.8 chr2 143484497 143484579 (99714794) + MamGypLTR2c LTR/Gypsy 817 895 (173) 562232 352 31.6 2.6 1.9 chr2 143632068 143632222 (99567151) + MamGypLTR1b LTR/Gypsy 602 757 (25) 562418 393 31.8 1.4 3.2 chr2 143771105 143771325 (99428048) C MamGypLTR2b LTR/Gypsy (1) 921 705 562590 235 28.1 5.8 7.5 chr2 143839419 143839497 (99359876) C LTR81A LTR/Gypsy (1033) 317 237 562694 235 28.1 5.8 7.5 chr2 143839883 143839975 (99359398) C LTR81A LTR/Gypsy (1114) 236 148 562694 259 33.3 9.4 3.1 chr2 144512057 144512344 (98687029) C MamGypLTR2b LTR/Gypsy (605) 317 12 563471 230 28.9 13.7 5.1 chr2 144734973 144735147 (98464226) + MamGypLTR1d LTR/Gypsy 314 503 (310) 563757 227 28.7 12.7 2.5 chr2 145796356 145796473 (97402900) C MamGypLTR1c LTR/Gypsy (673) 130 1 565076 253 21.1 0.0 1.9 chr2 145853051 145853103 (97346270) + MamGypLTR1b LTR/Gypsy 535 586 (196) 565157 258 28.4 1.4 0.0 chr2 145855639 145855712 (97343661) + MamGypLTR1a LTR/Gypsy 156 230 (554) 565161 347 37.0 6.3 3.7 chr2 145857825 145858172 (97341201) C MamGypLTR1a LTR/Gypsy (0) 784 428 565164 331 30.8 4.4 2.9 chr2 145858269 145858405 (97340968) C MamGypLTR1a LTR/Gypsy (490) 294 156 565164 286 26.5 4.7 8.1 chr2 145983556 145983703 (97215670) C MamGypLTR2b LTR/Gypsy (6) 916 774 565316 257 29.5 8.2 4.5 chr2 146133780 146133889 (97065484) C MamGypLTR3 LTR/Gypsy (126) 713 600 565505 344 32.9 14.9 4.9 chr2 146481037 146481465 (96717908) + MamGypLTR2c LTR/Gypsy 82 553 (515) 565958 321 35.7 12.2 1.4 chr2 146481619 146481905 (96717468) + MamGypLTR2c LTR/Gypsy 736 1053 (15) 565958 540 31.2 4.1 2.1 chr2 147389694 147389935 (95809438) C MamGypLTR2b LTR/Gypsy (3) 919 673 567056 288 27.8 6.1 5.3 chr2 147561938 147562051 (95637322) C MamGypLTR2c LTR/Gypsy (654) 414 300 567277 227 34.7 4.0 5.7 chr2 147562091 147562267 (95637106) C MamGypLTR2c LTR/Gypsy (873) 195 22 567277 564 37.5 4.5 1.3 chr2 147563866 147564178 (95635195) + MamGypLTR1b LTR/Gypsy 435 757 (25) 567282 382 30.6 15.9 1.6 chr2 148038454 148038705 (95160668) + MamGypLTR2b LTR/Gypsy 570 857 (65) 567906 490 31.8 14.8 1.7 chr2 148267989 148268407 (94930966) C MamGypLTR1c LTR/Gypsy (32) 771 298 568202 275 24.7 3.5 1.2 chr2 150170579 150170664 (93028709) + MamGypLTR1b LTR/Gypsy 695 782 (0) 570672 279 37.5 7.6 4.2 chr2 150370577 150370932 (92828441) + LTR81C LTR/Gypsy 275 642 (511) 570924 382 32.2 3.9 4.3 chr2 150371012 150371219 (92828154) + LTR81C LTR/Gypsy 799 1005 (148) 570924 482 28.9 18.7 2.3 chr2 150505529 150505871 (92693502) + LTR81B LTR/Gypsy 990 1388 (5) 571121 318 30.4 7.8 1.5 chr2 150962658 150962861 (92236512) + MamGypLTR1a LTR/Gypsy 29 245 (539) 571656 624 28.9 7.1 3.3 chr2 150966377 150966741 (92232632) + MamGypLTR1a LTR/Gypsy 33 411 (373) 571662 240 26.9 1.8 6.3 chr2 151464099 151464209 (91735164) + MamGypLTR3 LTR/Gypsy 638 743 (96) 572332 669 25.1 8.2 2.3 chr2 151587086 151587305 (91612068) C LTR81B LTR/Gypsy (1057) 336 104 572514 298 31.8 3.4 0.7 chr2 151672588 151672736 (91526637) + MamGypLTR1c LTR/Gypsy 9 161 (652) 572617 345 33.8 4.7 0.7 chr2 151673005 151673153 (91526220) + MamGypLTR1c LTR/Gypsy 398 552 (251) 572617 238 31.8 0.7 8.3 chr2 151770040 151770183 (91429190) + MamGypLTR3 LTR/Gypsy 698 830 (9) 572758 354 21.1 18.5 5.4 chr2 151948482 151948611 (91250762) C LTR81A LTR/Gypsy (118) 1232 1086 573001 265 24.4 2.0 5.8 chr2 151996571 151996727 (91202646) + MamGypLTR2b LTR/Gypsy 693 880 (42) 573077 411 26.4 2.8 8.4 chr2 152795558 152795735 (90403638) + LTR81A LTR/Gypsy 14 181 (1169) 574291 442 34.7 2.3 4.0 chr2 153011873 153012049 (90187324) + MamGypLTR3 LTR/Gypsy 491 664 (175) 574651 318 37.7 7.0 5.7 chr2 153587053 153587437 (89611936) C MamGypLTR1c LTR/Gypsy (81) 722 333 575505 485 23.5 5.0 0.8 chr2 153587668 153587787 (89611586) C MamGypLTR1c LTR/Gypsy (633) 170 46 575505 389 14.4 12.8 11.4 chr2 153731721 153731869 (89467504) C MamGypLTR1a LTR/Gypsy (501) 283 133 575750 279 25.3 11.6 8.5 chr2 153843497 153843660 (89355713) C MamGypLTR2b LTR/Gypsy (546) 376 208 575894 306 33.1 8.2 8.2 chr2 153910501 153910878 (89288495) + MamGypLTR2c LTR/Gypsy 2 379 (689) 575974 242 8.3 2.8 0.0 chr2 153980036 153980071 (89219302) + MamGypLTR2b LTR/Gypsy 864 900 (22) 576063 235 28.9 0.0 1.1 chr2 154027404 154027494 (89171879) + LTR81B LTR/Gypsy 156 245 (1148) 576118 237 33.6 12.5 1.5 chr2 154029232 154029367 (89170006) + LTR81B LTR/Gypsy 1050 1200 (193) 576121 291 19.4 2.9 1.5 chr2 154318456 154318523 (88880850) + MamGypLTR2b LTR/Gypsy 853 921 (1) 576422 248 32.6 2.8 4.2 chr2 155540740 155540883 (87658490) C MamGypLTR3 LTR/Gypsy (428) 411 270 577984 465 26.8 2.5 1.9 chr2 156039138 156039297 (87160076) + LTR81A LTR/Gypsy 18 178 (1172) 578607 330 27.2 12.9 2.2 chr2 156088689 156088827 (87110546) C MamGypLTR1b LTR/Gypsy (623) 159 6 578684 271 33.3 7.8 2.1 chr2 156882777 156882917 (86316456) + MamGypLTR1a LTR/Gypsy 634 782 (2) 579633 277 25.0 5.8 3.3 chr2 156923559 156923678 (86275695) + MamGypLTR1a LTR/Gypsy 154 276 (508) 579680 503 26.8 3.3 1.3 chr2 156923995 156924145 (86275228) + MamGypLTR1a LTR/Gypsy 631 784 (0) 579680 299 23.4 0.0 4.5 chr2 156981994 156982060 (86217313) C MamGypLTR2b LTR/Gypsy (587) 335 272 579757 341 28.1 4.5 5.2 chr2 156982428 156982669 (86216704) C LTR81AB LTR/Gypsy (967) 383 130 579759 522 29.8 4.4 9.0 chr2 157202985 157203311 (85996062) + MamGypLTR1d LTR/Gypsy 8 341 (462) 580026 418 36.1 1.9 3.9 chr2 157702446 157702704 (85496669) + MamGypLTR2c LTR/Gypsy 2 255 (813) 580695 394 34.7 6.3 3.6 chr2 157702976 157703310 (85496063) + MamGypLTR2c LTR/Gypsy 710 1053 (15) 580695 340 25.7 4.0 0.0 chr2 157800849 157800949 (85398424) C MamGypLTR1d LTR/Gypsy (7) 806 702 580836 236 32.7 8.0 6.2 chr2 157801270 157801494 (85397879) C MamGypLTR2c LTR/Gypsy (729) 339 111 580837 234 21.9 0.0 0.0 chr2 158354285 158354325 (84845048) C MamGypLTR3 LTR/Gypsy (237) 602 562 581494 281 17.4 0.0 2.0 chr2 158518521 158518582 (84680791) C MamGypLTR2b LTR/Gypsy (3) 919 867 581698 365 16.7 9.5 5.3 chr2 158774776 158774870 (84424503) + MamGypLTR1b LTR/Gypsy 627 725 (57) 582107 514 29.3 4.9 4.9 chr2 158873911 158874154 (84325219) + MamGypLTR2c LTR/Gypsy 819 1062 (6) 582265 591 29.7 9.3 5.7 chr2 158901638 158901990 (84297383) + LTR81B LTR/Gypsy 193 558 (835) 582297 373 29.4 16.4 4.9 chr2 158902371 158902775 (84296598) + LTR81B LTR/Gypsy 720 1387 (6) 582297 466 28.8 3.0 9.7 chr2 158917997 158918265 (84281108) C LTR81C LTR/Gypsy (17) 1136 886 582328 326 26.0 4.0 1.0 chr2 158918367 158918467 (84280906) C LTR81C LTR/Gypsy (530) 623 520 582328 363 32.1 15.8 4.2 chr2 158918888 158919324 (84280049) C LTR81C LTR/Gypsy (630) 720 42 582328 530 33.9 5.8 2.5 chr2 158954541 158954939 (84244434) + LTR81A LTR/Gypsy 235 646 (704) 582368 233 24.7 2.1 9.6 chr2 158954939 158955032 (84244341) + LTR81A LTR/Gypsy 892 978 (372) 582368 644 24.4 6.2 1.3 chr2 158955173 158955390 (84243983) + LTR81A LTR/Gypsy 898 1311 (39) 582369 232 34.9 7.5 1.0 chr2 160751085 160751284 (82448089) + MamGypLTR3 LTR/Gypsy 150 362 (477) 584958 249 28.9 6.6 9.0 chr2 160756101 160756267 (82443106) + MamGypLTR1b LTR/Gypsy 39 201 (581) 584965 800 25.6 11.1 1.5 chr2 160756566 160756835 (82442538) + MamGypLTR1b LTR/Gypsy 487 782 (0) 584965 241 30.1 13.4 7.7 chr2 160795121 160795329 (82404044) + LTR81A LTR/Gypsy 919 1139 (211) 585024 350 25.2 2.9 6.4 chr2 160861487 160861626 (82337747) + MamGypLTR3 LTR/Gypsy 640 774 (65) 585132 450 30.9 3.5 7.4 chr2 161500923 161501096 (81698277) C MamGypLTR1c LTR/Gypsy (15) 788 618 585980 450 30.9 3.5 7.4 chr2 161501542 161501649 (81697724) C MamGypLTR1c LTR/Gypsy (186) 617 517 585980 273 24.9 13.0 3.6 chr2 161501908 161502099 (81697274) C MamGypLTR1c LTR/Gypsy (593) 210 1 585980 277 28.3 5.4 0.0 chr2 161509691 161509782 (81689591) + MamGyp-int LTR/Gypsy 798 894 (4168) 585990 641 32.1 6.3 8.3 chr2 161571979 161572545 (81626828) C MamGypLTR1d LTR/Gypsy (19) 794 233 586070 304 27.8 24.4 3.0 chr2 161971347 161971518 (81227855) + MamGypLTR1b LTR/Gypsy 3 211 (571) 586568 372 25.0 7.4 0.0 chr2 161971616 161971723 (81227650) + MamGypLTR1b LTR/Gypsy 440 555 (227) 586568 276 34.4 7.1 1.6 chr2 162409396 162409522 (80789851) + MamGypLTR3 LTR/Gypsy 278 411 (428) 587153 225 40.6 1.5 7.6 chr2 162475120 162475316 (80724057) + MamGypLTR2b LTR/Gypsy 23 207 (715) 587225 409 25.0 0.0 1.1 chr2 163591210 163591298 (79608075) + MamGypLTR2c LTR/Gypsy 19 106 (962) 588610 236 29.3 2.3 4.7 chr2 163619113 163619198 (79580175) + MamGypLTR1c LTR/Gypsy 148 231 (572) 588642 400 33.6 5.3 4.6 chr2 163841696 163841957 (79357416) C MamGypLTR1b LTR/Gypsy (21) 761 498 588924 1016 33.5 12.3 4.5 chr2 163845011 163845707 (79353666) + LTR81 LTR/Gypsy 433 1184 (5) 588926 269 35.1 5.0 4.5 chr2 163915524 163915744 (79283629) C MamGypLTR1d LTR/Gypsy (6) 807 586 589015 367 32.2 18.5 3.8 chr2 163917645 163917963 (79281410) + MamGypLTR2c LTR/Gypsy 135 500 (568) 589019 268 36.9 12.1 3.5 chr2 164603274 164603753 (78595620) C MamGypLTR2c LTR/Gypsy (166) 902 382 589964 552 36.3 8.8 5.5 chr2 164639284 164639344 (78560029) C MamGypLTR1d LTR/Gypsy (9) 804 756 590022 552 33.5 11.6 5.2 chr2 164639677 164640320 (78559053) C MamGypLTR1d LTR/Gypsy (58) 755 29 590022 299 28.9 11.9 3.4 chr2 164860538 164860655 (78338718) C MamGypLTR1b LTR/Gypsy (538) 246 119 590303 418 36.8 8.8 3.8 chr2 164886609 164887060 (78312313) C MamGypLTR1d LTR/Gypsy (0) 813 339 590350 328 29.4 11.9 13.0 chr2 164887679 164887914 (78311459) C MamGypLTR1d LTR/Gypsy (509) 304 80 590350 328 29.4 11.9 13.0 chr2 164887935 164887990 (78311383) C MamGypLTR1d LTR/Gypsy (734) 79 15 590350 526 35.6 5.4 1.3 chr2 165011830 165012068 (78187305) C MamGypLTR1d LTR/Gypsy (15) 798 550 590531 292 20.2 5.9 1.2 chr2 165722477 165722561 (77476812) C LTR81A LTR/Gypsy (1) 1349 1261 591478 253 31.4 2.4 1.6 chr2 165724000 165724122 (77475251) C LTR81A LTR/Gypsy (109) 1241 1118 591478 548 32.6 6.1 4.1 chr2 165724911 165725252 (77474121) C LTR81A LTR/Gypsy (918) 432 84 591478 624 31.0 10.3 1.2 chr2 166061613 166061932 (77137441) C MamGypLTR2b LTR/Gypsy (90) 832 484 591936 406 30.4 6.7 4.7 chr2 166061957 166062149 (77137224) C MamGypLTR2b LTR/Gypsy (498) 424 228 591936 228 30.1 10.7 6.1 chr2 166068022 166068152 (77131221) C MamGypLTR1c LTR/Gypsy (119) 684 548 591944 320 33.9 4.0 3.5 chr2 166068487 166068685 (77130688) C MamGypLTR1c LTR/Gypsy (0) 803 604 591946 258 37.6 4.2 0.7 chr2 166232988 166233129 (76966244) C MamGypLTR2c LTR/Gypsy (599) 469 323 592154 369 35.5 8.8 2.0 chr2 166304190 166304393 (76894980) C MamGypLTR3 LTR/Gypsy (500) 339 122 592245 905 31.9 9.9 2.4 chr2 166822430 166822547 (76376826) + MamGypLTR1a LTR/Gypsy 15 147 (637) 592944 905 31.9 9.9 2.4 chr2 166822747 166823009 (76376364) + MamGypLTR1a LTR/Gypsy 148 425 (359) 592944 306 31.2 6.2 3.4 chr2 167009248 167009426 (76189947) C MamGypLTR2b LTR/Gypsy (2) 920 737 593191 299 19.7 1.6 1.4 chr2 167644298 167644378 (75554995) C MamGypLTR1d LTR/Gypsy (20) 793 702 593997 334 29.6 11.5 3.6 chr2 167784344 167784508 (75414865) + LTR81B LTR/Gypsy 1 178 (1215) 594175 350 30.4 4.2 6.8 chr2 167784529 167784764 (75414609) + LTR81B LTR/Gypsy 242 471 (922) 594175 260 20.0 1.5 4.4 chr2 168254467 168254534 (74944839) + MamGypLTR1b LTR/Gypsy 700 765 (17) 594731 841 25.9 2.6 1.7 chr2 168284381 168284612 (74914761) C MamGypLTR1c LTR/Gypsy (569) 234 1 594770 273 36.2 1.6 0.8 chr2 168293569 168293696 (74905677) C MamGyp-int LTR/Gypsy (612) 4450 4322 594786 879 33.5 3.0 3.0 chr2 168293728 168294096 (74905277) C MamGyp-int LTR/Gypsy (805) 4257 3889 594786 369 27.6 12.1 1.2 chr2 168336038 168336202 (74863171) C MamGypLTR2c LTR/Gypsy (22) 1046 864 594829 400 24.8 11.0 6.2 chr2 168337415 168337560 (74861813) C MamGypLTR2c LTR/Gypsy (910) 158 6 594829 680 30.4 11.9 1.2 chr2 168438891 168439233 (74760140) C LTR81B LTR/Gypsy (0) 1393 1014 594961 344 32.5 18.7 2.7 chr2 169198073 169198549 (74000824) C LTR81C LTR/Gypsy (75) 1078 526 595941 275 29.6 2.0 0.0 chr2 170271257 170271354 (72928019) + MamGypLTR2c LTR/Gypsy 948 1047 (21) 597377 283 26.9 6.7 6.1 chr2 171062985 171063319 (72136054) C MamGypLTR2c LTR/Gypsy (65) 1124 813 598732 556 25.7 8.7 2.9 chr2 171191016 171191223 (72008150) C MamGypLTR2c LTR/Gypsy (11) 1057 838 598893 587 21.6 2.6 3.9 chr2 171461345 171461498 (71737875) C MamGypLTR2c LTR/Gypsy (83) 985 834 599324 410 32.3 12.1 0.5 chr2 172085573 172085771 (71113602) C MamGypLTR3 LTR/Gypsy (18) 821 600 600454 233 28.0 5.3 1.3 chr2 172450726 172450801 (70748572) + MamGypLTR2c LTR/Gypsy 324 402 (666) 601102 438 25.6 6.2 6.2 chr2 172452174 172452352 (70747021) + MamGypLTR2c LTR/Gypsy 765 943 (125) 601102 234 32.3 11.0 3.1 chr2 173484235 173484397 (69714976) C MamGypLTR1c LTR/Gypsy (627) 176 1 602743 267 29.6 0.0 4.0 chr2 173731323 173731396 (69467977) C MamGypLTR2c LTR/Gypsy (699) 369 299 603128 312 33.3 0.8 1.5 chr2 173774511 173774644 (69424729) C MamGypLTR3 LTR/Gypsy (7) 832 700 603184 377 26.6 1.8 3.5 chr2 173774821 173774933 (69424440) C MamGypLTR3 LTR/Gypsy (372) 467 357 603184 362 30.3 14.9 7.2 chr2 174330046 174330433 (68868940) + MamGypLTR2b LTR/Gypsy 491 908 (14) 604002 488 26.2 3.7 8.0 chr2 174402058 174402219 (68797154) C MamGypLTR1d LTR/Gypsy (0) 813 659 604094 306 32.6 12.4 3.1 chr2 174423321 174423513 (68775860) C LTR81 LTR/Gypsy (480) 709 499 604130 348 31.1 8.6 3.2 chr2 174735846 174736031 (68463342) + LTR81C LTR/Gypsy 831 1026 (127) 604572 230 26.1 0.0 0.0 chr2 176223212 176223257 (66976116) + MamGypLTR2c LTR/Gypsy 933 978 (90) 606904 251 17.3 0.0 5.5 chr2 176316115 176316169 (66883204) C LTR81C LTR/Gypsy (0) 1153 1102 607025 1075 27.9 5.7 3.7 chr2 176317948 176318401 (66880972) C LTR81B LTR/Gypsy (930) 463 1 607031 324 20.5 8.9 1.3 chr2 176323663 176323741 (66875632) + MamGypLTR1b LTR/Gypsy 641 725 (57) 607043 242 36.0 5.7 2.6 chr2 176404237 176404464 (66794909) + MamGypLTR3 LTR/Gypsy 605 839 (0) 607141 367 28.4 10.4 4.3 chr2 176446200 176446479 (66752894) + LTR81C LTR/Gypsy 823 1119 (34) 607194 235 29.2 3.2 4.3 chr2 176871614 176871706 (66327667) C LTR81A LTR/Gypsy (1206) 144 53 607703 539 27.6 14.8 7.3 chr2 177303753 177304178 (65895195) C LTR81AB LTR/Gypsy (0) 1189 732 608291 719 23.0 1.5 10.7 chr2 177304710 177304972 (65894401) C LTR81AB LTR/Gypsy (32) 246 8 608291 448 29.1 7.4 9.4 chr2 177690332 177690736 (65508637) + MamGypLTR1d LTR/Gypsy 12 408 (405) 608807 482 35.2 2.0 6.8 chr2 177816999 177817291 (65382082) + MamGypLTR2b LTR/Gypsy 45 323 (599) 608989 352 25.0 4.6 2.0 chr2 177817540 177817690 (65381683) + MamGypLTR2b LTR/Gypsy 754 908 (14) 608990 427 30.1 6.6 10.2 chr2 178065570 178065739 (65133634) C LTR81B LTR/Gypsy (1016) 377 221 609379 427 30.1 6.6 10.2 chr2 178066073 178066282 (65133091) C LTR81B LTR/Gypsy (1173) 220 11 609379 539 28.8 12.9 8.7 chr2 178149694 178150165 (65049208) + MamGypLTR1c LTR/Gypsy 39 530 (273) 609497 300 15.5 6.9 1.4 chr2 178150392 178150463 (65048910) + MamGypLTR1c LTR/Gypsy 712 787 (16) 609497 396 30.4 13.6 4.5 chr2 178174039 178174303 (65025070) + MamGypLTR1c LTR/Gypsy 473 761 (42) 609547 308 23.9 11.1 7.4 chr2 178191113 178191302 (65008071) + MamGypLTR2b LTR/Gypsy 702 898 (24) 609578 766 30.1 14.2 5.9 chr2 178455959 178456583 (64742790) + LTR81C LTR/Gypsy 41 717 (436) 609932 236 17.8 0.0 0.0 chr2 178521985 178522029 (64677344) + LTR81AB LTR/Gypsy 1 45 (233) 610006 235 32.7 0.0 4.7 chr2 178522214 178522319 (64677054) + LTR81A LTR/Gypsy 271 371 (979) 610007 264 21.9 4.9 9.9 chr2 178522999 178523140 (64676233) + LTR81A LTR/Gypsy 1173 1307 (43) 610009 236 22.8 12.9 1.1 chr2 178755346 178755438 (64443935) C LTR81B LTR/Gypsy (1100) 293 190 610324 538 21.8 3.3 2.2 chr2 178757177 178757359 (64442014) C MamGypLTR2b LTR/Gypsy (25) 897 713 610330 889 26.5 5.0 4.7 chr2 179770703 179771082 (63428291) + LTR81B LTR/Gypsy 21 401 (992) 611532 267 29.6 2.7 2.7 chr2 180230718 180230828 (62968545) C LTR81 LTR/Gypsy (427) 762 652 612105 566 29.9 17.9 3.9 chr2 180230908 180231517 (62967856) C LTR81B LTR/Gypsy (677) 716 16 612106 392 28.6 11.3 5.2 chr2 180561693 180561921 (62637452) + MamGypLTR1b LTR/Gypsy 535 777 (5) 612549 372 31.7 14.6 7.4 chr2 180683803 180684268 (62515105) C MamGypLTR1b LTR/Gypsy (16) 766 266 612703 316 27.5 4.7 8.0 chr2 180706058 180706207 (62493166) + MamGypLTR2c LTR/Gypsy 240 384 (684) 612729 402 25.0 12.0 9.1 chr2 180707775 180708051 (62491322) C MamGypLTR1b LTR/Gypsy (475) 309 32 612732 265 29.3 2.4 0.0 chr2 180792829 180792910 (62406463) C MamGypLTR2b LTR/Gypsy (81) 841 758 612844 244 16.7 6.0 7.1 chr2 180880897 180880980 (62318393) + LTR81B LTR/Gypsy 1263 1345 (48) 612968 233 22.4 4.9 4.9 chr2 180983082 180983242 (62216131) C MamGypLTR2c LTR/Gypsy (25) 1043 750 613088 232 33.7 4.3 1.1 chr2 180983417 180983509 (62215864) C MamGypLTR2b LTR/Gypsy (277) 645 550 613090 332 35.4 0.0 1.7 chr2 181312494 181312611 (61886762) + MamGypLTR3 LTR/Gypsy 413 528 (311) 613483 465 35.9 4.5 7.9 chr2 181322283 181322727 (61876646) + MamGypLTR1d LTR/Gypsy 55 484 (329) 613498 264 33.1 2.8 6.3 chr2 181400166 181400307 (61799066) + MamGypLTR3 LTR/Gypsy 479 615 (224) 613577 408 34.2 15.1 2.6 chr2 181510347 181510691 (61688682) C MamGypLTR3 LTR/Gypsy (184) 655 268 613728 306 29.2 4.0 3.2 chr2 181515262 181515385 (61683988) + LTR81B LTR/Gypsy 187 311 (1082) 613733 372 38.3 10.9 0.0 chr2 181515604 181515778 (61683595) + LTR81B LTR/Gypsy 626 819 (574) 613734 354 29.0 6.3 7.4 chr2 181550030 181550219 (61649154) + MamGypLTR2c LTR/Gypsy 414 601 (467) 613780 239 22.0 0.0 0.0 chr2 182048990 182049039 (61150334) + MamGypLTR1b LTR/Gypsy 733 782 (0) 614418 464 31.8 0.5 3.2 chr2 182065327 182065511 (61133862) + MamGypLTR3 LTR/Gypsy 657 836 (3) 614434 648 31.4 4.3 7.1 chr2 182111835 182112160 (61087213) C LTR81C LTR/Gypsy (0) 1153 837 614490 353 30.7 12.6 3.8 chr2 182112545 182112727 (61086646) C LTR81C LTR/Gypsy (869) 320 122 614490 257 28.1 10.6 1.6 chr2 182808790 182808912 (60390461) + MamGypLTR1b LTR/Gypsy 1 134 (648) 615308 281 31.0 2.0 4.0 chr2 182812273 182812420 (60386953) C MamGypLTR2c LTR/Gypsy (905) 163 19 615313 437 28.1 4.0 4.0 chr2 182812528 182812701 (60386672) C LTR81A LTR/Gypsy (1176) 174 1 615314 296 27.3 1.7 4.3 chr2 183043809 183043923 (60155450) + MamGypLTR2b LTR/Gypsy 790 901 (21) 615601 432 30.7 2.3 7.6 chr2 183297333 183297596 (59901777) C LTR81C LTR/Gypsy (148) 1005 756 615914 331 31.7 2.6 1.6 chr2 183298143 183298331 (59901042) C LTR81C LTR/Gypsy (1000) 350 160 615914 491 33.8 5.6 4.6 chr2 183485670 183485954 (59713419) C MamGypLTR1c LTR/Gypsy (232) 571 284 616193 238 31.9 4.3 0.0 chr2 183532962 183533077 (59666296) + LTR81C LTR/Gypsy 576 696 (457) 616258 260 30.7 6.6 9.3 chr2 184060445 184060627 (59138746) + LTR81C LTR/Gypsy 271 448 (945) 617019 339 28.0 5.4 0.0 chr2 184060745 184060837 (59138536) + LTR81C LTR/Gypsy 614 711 (639) 617019 476 32.1 12.6 3.7 chr2 184061097 184061445 (59137928) + LTR81C LTR/Gypsy 772 1151 (2) 617019 297 18.9 16.9 8.2 chr2 184094501 184094634 (59104739) + LTR81B LTR/Gypsy 89 233 (1117) 617083 297 17.4 18.2 8.3 chr2 184094931 184094952 (59104421) + LTR81B LTR/Gypsy 231 248 (1145) 617083 475 27.3 5.1 17.1 chr2 184614026 184614317 (58585056) + MamGypLTR2b LTR/Gypsy 626 882 (40) 617708 290 30.5 4.3 6.1 chr2 184936181 184936429 (58262944) C MamGypLTR1c LTR/Gypsy (13) 909 667 618062 230 34.6 1.9 1.9 chr2 185228792 185228947 (57970426) C LTR81A LTR/Gypsy (1127) 223 68 618451 419 32.2 19.1 4.4 chr2 185331762 185332128 (57867245) + MamGypLTR1c LTR/Gypsy 383 803 (0) 618596 232 21.7 8.6 1.4 chr2 185416698 185416767 (57782606) + MamGypLTR1d LTR/Gypsy 732 806 (7) 618713 397 25.7 8.7 6.6 chr2 185880484 185880725 (57318648) + MamGypLTR2b LTR/Gypsy 673 919 (3) 619291 396 29.9 8.3 2.4 chr2 186282004 186282171 (56917202) C MamGypLTR2c LTR/Gypsy (540) 528 351 619843 270 40.2 0.8 0.0 chr2 186726951 186727077 (56472296) + LTR81C LTR/Gypsy 649 776 (377) 620393 395 36.0 10.0 6.0 chr2 187086109 187086870 (56112503) C MamGypLTR1b LTR/Gypsy (0) 782 1 620888 330 33.7 5.4 1.2 chr2 187122006 187122173 (56077200) C MamGypLTR3 LTR/Gypsy (431) 408 234 620926 559 16.2 2.3 5.4 chr2 187329758 187329887 (55869486) C MamGypLTR1b LTR/Gypsy (7) 775 650 621200 505 33.7 11.0 4.9 chr2 187329932 187329967 (55869406) C MamGypLTR1b LTR/Gypsy (248) 536 500 621200 505 33.7 11.0 4.9 chr2 187330398 187330750 (55868623) C MamGypLTR1b LTR/Gypsy (285) 499 123 621200 233 17.1 0.0 0.0 chr2 187716315 187716355 (55483018) + LTR81AB LTR/Gypsy 175 215 (63) 621754 719 35.5 5.2 1.5 chr2 187716803 187717131 (55482242) + LTR81 LTR/Gypsy 613 953 (236) 621755 258 38.6 7.9 5.1 chr2 188030930 188031360 (55168013) C MamGypLTR2c LTR/Gypsy (598) 470 28 622219 387 31.0 12.5 4.5 chr2 188432968 188433231 (54766142) C MamGypLTR2c LTR/Gypsy (56) 1012 728 622710 403 36.0 5.0 2.5 chr2 188529153 188529354 (54670019) + MamGypLTR1b LTR/Gypsy 390 596 (188) 622845 302 29.5 8.3 1.0 chr2 188719587 188719682 (54479691) C LTR81B LTR/Gypsy (758) 635 533 623085 300 30.3 8.3 0.0 chr2 188719774 188719882 (54479491) C LTR81B LTR/Gypsy (986) 364 247 623085 433 34.6 12.2 5.9 chr2 188761031 188761148 (54438225) + MamGypLTR1b LTR/Gypsy 242 364 (418) 623168 433 34.6 12.2 5.9 chr2 188761334 188761550 (54437823) + MamGypLTR1b LTR/Gypsy 365 596 (186) 623168 433 34.6 12.2 5.9 chr2 188762046 188762217 (54437156) + MamGypLTR1b LTR/Gypsy 597 781 (1) 623168 309 31.6 0.0 2.6 chr2 189041835 189041912 (54157461) C MamGypLTR3 LTR/Gypsy (306) 533 458 623500 234 31.9 5.5 11.0 chr2 189109124 189109250 (54090123) C MamGypLTR3 LTR/Gypsy (324) 515 396 623594 283 28.1 21.6 5.2 chr2 189739561 189740009 (53459364) + LTR81B LTR/Gypsy 8 535 (815) 624366 378 29.9 9.6 2.5 chr2 189740415 189740613 (53458760) + LTR81B LTR/Gypsy 983 1195 (198) 624366 252 23.8 5.5 2.6 chr2 189783110 189783194 (53416179) C MamGypLTR1b LTR/Gypsy (681) 103 16 624419 367 35.4 5.8 3.6 chr2 190096796 190097103 (53102270) + MamGypLTR1b LTR/Gypsy 468 782 (0) 624807 289 33.9 13.3 1.6 chr2 190604272 190604294 (52595079) C MamGypLTR1b LTR/Gypsy (0) 782 762 625541 289 33.9 13.3 1.6 chr2 190604588 190604818 (52594555) C MamGypLTR1b LTR/Gypsy (21) 761 498 625541 256 27.1 9.2 7.9 chr2 190605029 190605180 (52594193) C MamGypLTR1b LTR/Gypsy (621) 161 8 625541 465 37.3 10.0 4.1 chr2 190902883 190903394 (52295979) C LTR81C LTR/Gypsy (401) 752 211 625998 258 17.7 4.2 2.1 chr2 190915745 190915840 (52283533) + MamGypLTR2c LTR/Gypsy 1004 1053 (15) 626014 650 27.1 12.0 6.1 chr2 190952429 190952770 (52246603) C MamGypLTR1a LTR/Gypsy (384) 400 39 626080 255 25.0 1.7 0.0 chr2 190961141 190961200 (52238173) C MamGypLTR1c LTR/Gypsy (364) 439 379 626095 307 30.3 10.2 1.3 chr2 190982265 190982421 (52216952) C LTR81B LTR/Gypsy (23) 1370 1200 626125 444 29.2 9.0 8.4 chr2 191496363 191496499 (51702874) C MamGypLTR3 LTR/Gypsy (8) 831 682 626877 444 29.2 9.0 8.4 chr2 191496812 191496995 (51702378) C MamGypLTR3 LTR/Gypsy (158) 681 508 626877 236 21.1 4.2 1.4 chr2 192088043 192088114 (51111259) + MamGypLTR2c LTR/Gypsy 434 507 (561) 627767 288 14.3 3.4 5.1 chr2 192088546 192088604 (51110769) + MamGypLTR1c LTR/Gypsy 746 803 (0) 627768 406 33.7 1.8 0.0 chr2 192331978 192332140 (50867233) C MamGypLTR1c LTR/Gypsy (241) 562 397 628090 244 32.0 9.2 1.3 chr2 192332326 192332477 (50866896) C MamGypLTR1c LTR/Gypsy (611) 202 39 628090 435 32.2 16.9 6.6 chr2 193218669 193219379 (49979994) + MamGypLTR1c LTR/Gypsy 17 800 (3) 629343 420 33.9 18.0 1.9 chr2 193606335 193606707 (49592666) C MamGypLTR1a LTR/Gypsy (10) 774 342 629867 475 25.0 7.5 6.3 chr2 193677707 193677945 (49521428) + LTR81C LTR/Gypsy 868 1109 (44) 629955 259 32.2 7.1 9.1 chr2 194050713 194050910 (49148463) C MamGypLTR2b LTR/Gypsy (717) 205 12 630421 230 14.3 0.0 2.3 chr2 194728315 194728357 (48471016) + MamGypLTR2b LTR/Gypsy 857 898 (24) 631297 230 14.3 0.0 2.3 chr2 194729915 194729957 (48469416) C MamGypLTR2b LTR/Gypsy (24) 898 857 631300 320 22.8 17.6 2.0 chr2 195001833 195001980 (48197393) + LTR81A LTR/Gypsy 106 276 (1074) 631677 297 37.7 1.3 1.3 chr2 195203211 195203363 (47996010) C MamGyp-int LTR/Gypsy (612) 4450 4298 631918 229 34.7 4.0 4.0 chr2 195456104 195456253 (47743120) C MamGypLTR1a LTR/Gypsy (304) 480 331 632256 388 23.4 2.7 0.9 chr2 195537366 195537477 (47661896) C MamGypLTR2b LTR/Gypsy (10) 912 799 632351 316 27.3 5.6 7.0 chr2 195649482 195649623 (47549750) C MamGypLTR1a LTR/Gypsy (643) 141 2 632509 392 28.2 11.8 0.0 chr2 195703792 195703986 (47495387) + MamGypLTR1a LTR/Gypsy 1 218 (566) 632577 345 26.0 16.3 0.7 chr2 195892981 195893127 (47306246) + LTR81 LTR/Gypsy 845 1014 (175) 632807 237 35.2 0.0 4.4 chr2 196256548 196256660 (46942713) C LTR81C LTR/Gypsy (651) 502 395 633247 322 30.6 15.5 0.0 chr2 196256690 196256895 (46942478) C LTR81A LTR/Gypsy (900) 450 213 633248 364 23.9 13.2 2.8 chr2 196292065 196292269 (46907104) + LTR81C LTR/Gypsy 91 322 (1071) 633297 403 35.5 7.8 7.3 chr2 196292830 196292889 (46906484) + LTR81C LTR/Gypsy 430 483 (670) 633297 403 35.5 7.8 7.3 chr2 196293301 196293676 (46905697) + LTR81C LTR/Gypsy 484 868 (285) 633297 264 23.2 19.4 4.2 chr2 196319240 196319383 (46879990) + MamGypLTR1c LTR/Gypsy 360 525 (278) 633335 787 32.4 10.4 3.8 chr2 196339997 196340622 (46858751) C MamGypLTR1c LTR/Gypsy (114) 670 21 633376 265 23.8 5.8 7.1 chr2 196371398 196371551 (46827822) C MamGypLTR2c LTR/Gypsy (53) 1015 864 633424 334 29.7 2.8 11.1 chr2 196406569 196406615 (46792758) C MamGypLTR3 LTR/Gypsy (587) 252 211 633471 334 29.7 2.8 11.1 chr2 196406916 196407083 (46792290) C MamGypLTR3 LTR/Gypsy (629) 210 55 633471 257 35.0 3.1 1.9 chr2 197680880 197681039 (45518334) + MamGypLTR1b LTR/Gypsy 540 701 (81) 635335 338 25.6 7.6 0.8 chr2 199136298 199136415 (44062958) + MamGypLTR1a LTR/Gypsy 650 775 (9) 637633 407 25.9 5.9 4.5 chr2 199136961 199137182 (44062191) C MamGypLTR2b LTR/Gypsy (0) 922 698 637636 347 36.6 3.2 2.0 chr2 199289813 199290035 (43909338) + LTR81A LTR/Gypsy 135 464 (886) 637833 341 33.0 10.1 10.3 chr2 199384766 199385337 (43814036) C MamGypLTR2c LTR/Gypsy (66) 1002 432 637959 308 27.8 13.6 11.1 chr2 199575573 199575904 (43623469) + LTR81B LTR/Gypsy 1052 1391 (2) 638205 451 28.8 6.1 1.7 chr2 199610384 199610563 (43588810) + LTR81A LTR/Gypsy 12 199 (1151) 638263 370 27.0 6.5 9.9 chr2 199644047 199644075 (43555298) C LTR81B LTR/Gypsy (1139) 254 232 638299 370 27.0 6.5 9.9 chr2 199644366 199644598 (43554775) C LTR81B LTR/Gypsy (1162) 231 1 638299 318 30.5 3.9 7.8 chr2 200016359 200016589 (43182784) C MamGypLTR1d LTR/Gypsy (35) 778 557 638794 335 28.5 7.3 6.3 chr2 200017529 200017734 (43181639) C MamGypLTR1c LTR/Gypsy (0) 803 596 638795 363 24.8 1.9 8.2 chr2 200742550 200742747 (42456626) + MamGypLTR1a LTR/Gypsy 26 197 (587) 639751 742 27.6 16.9 4.0 chr2 200747979 200748351 (42451022) + MamGypLTR1a LTR/Gypsy 356 776 (8) 639751 300 31.6 8.0 6.2 chr2 201027042 201027203 (42172170) C MamGypLTR1a LTR/Gypsy (0) 784 620 640179 265 28.1 17.3 5.8 chr2 201028109 201028202 (42171171) C MamGypLTR1a LTR/Gypsy (296) 486 384 640179 583 25.9 11.1 3.6 chr2 201028242 201028524 (42170849) C MamGypLTR1a LTR/Gypsy (399) 383 29 640179 251 29.8 3.2 4.0 chr2 201086678 201086803 (42112570) + LTR81A LTR/Gypsy 57 181 (1169) 640263 374 30.6 17.4 3.1 chr2 201119111 201119403 (42079970) C LTR81 LTR/Gypsy (58) 1131 797 640312 285 29.1 3.1 6.2 chr2 201119799 201119900 (42079473) C LTR81 LTR/Gypsy (916) 237 144 640312 285 29.1 3.1 6.2 chr2 201120080 201120137 (42079236) C LTR81 LTR/Gypsy (1010) 143 82 640312 309 21.8 11.8 2.4 chr2 201768997 201769123 (41430250) C MamGypLTR1d LTR/Gypsy (674) 139 1 641310 323 25.0 5.4 2.7 chr2 203912718 203912828 (39286545) C MamGypLTR1c LTR/Gypsy (5) 798 685 645339 665 29.3 1.7 3.4 chr2 204416515 204416751 (38782622) C MamGypLTR1b LTR/Gypsy (549) 233 1 646332 323 30.1 18.9 5.9 chr2 204639265 204639571 (38559802) + MamGypLTR1d LTR/Gypsy 39 385 (428) 646734 812 28.5 13.5 4.8 chr2 204756211 204756902 (38442471) C MamGypLTR1d LTR/Gypsy (50) 763 1 646920 235 22.9 1.6 1.6 chr2 205100451 205100512 (38098861) + MamGypLTR2b LTR/Gypsy 809 870 (52) 647435 287 30.8 9.9 0.8 chr2 206375054 206375184 (36824189) C MamGypLTR1a LTR/Gypsy (120) 664 522 649118 759 25.1 4.9 4.1 chr2 206375262 206375527 (36823846) C MamGypLTR1a LTR/Gypsy (515) 269 2 649118 267 28.6 1.4 1.4 chr2 207235116 207235186 (35964187) C LTR81B LTR/Gypsy (308) 1085 1015 650563 230 26.0 11.7 0.0 chr2 207662310 207662386 (35536987) C MamGypLTR3 LTR/Gypsy (335) 504 419 651147 469 33.1 5.6 0.7 chr2 210697466 210697683 (32501690) C MamGypLTR1a LTR/Gypsy (9) 794 543 655494 364 30.9 3.7 6.2 chr2 210697900 210698061 (32501312) C MamGypLTR1a LTR/Gypsy (573) 209 52 655494 492 28.9 8.9 5.5 chr2 210796419 210796689 (32402684) C LTR81 LTR/Gypsy (2) 1187 908 655618 290 29.8 17.2 2.1 chr2 211359812 211360090 (31839283) C MamGypLTR1c LTR/Gypsy (13) 790 452 656382 308 34.1 1.1 0.0 chr2 211389860 211389947 (31809426) C MamGypLTR1a LTR/Gypsy (306) 478 390 656409 966 30.1 11.3 6.2 chr2 211399348 211400037 (31799336) C MamGypLTR2c LTR/Gypsy (0) 1068 344 656422 281 25.0 2.5 1.2 chr2 211400257 211400337 (31799036) C LTR81AB LTR/Gypsy (55) 223 142 656423 764 30.2 18.1 2.5 chr2 211404187 211404716 (31794657) C LTR81B LTR/Gypsy (140) 1253 641 656431 770 25.3 8.2 2.7 chr2 211404801 211405093 (31794280) C LTR81B LTR/Gypsy (1081) 312 4 656431 313 33.5 3.4 10.2 chr2 211631324 211631559 (31567814) C LTR81C LTR/Gypsy (712) 441 222 656692 384 30.6 18.1 0.8 chr2 211688624 211688883 (31510490) C MamGypLTR1a LTR/Gypsy (362) 422 118 656772 406 36.0 5.9 6.7 chr2 211739590 211739991 (31459382) C MamGypLTR1b LTR/Gypsy (206) 576 181 656820 319 38.4 6.7 0.8 chr2 211952086 211952353 (31247020) C MamGypLTR1b LTR/Gypsy (12) 770 487 657079 279 36.8 7.1 4.7 chr2 212210637 212210847 (30988526) C MamGypLTR1b LTR/Gypsy (190) 592 377 657418 413 29.5 9.3 2.1 chr2 212213670 212213863 (30985510) + MamGypLTR1b LTR/Gypsy 1 208 (574) 657423 254 37.0 12.4 1.0 chr2 212214018 212214211 (30985162) + MamGypLTR1b LTR/Gypsy 432 647 (137) 657423 230 29.7 12.9 4.6 chr2 212218229 212218422 (30980951) + MamGypLTR1a LTR/Gypsy 10 219 (563) 657434 244 33.6 7.5 2.9 chr2 212218617 212218855 (30980518) + MamGypLTR1a LTR/Gypsy 486 735 (49) 657434 278 31.9 9.1 2.4 chr2 212237103 212237311 (30962062) + MamGypLTR2b LTR/Gypsy 672 894 (28) 657464 255 27.7 4.8 3.8 chr2 212819728 212819832 (30379541) + MamGypLTR1b LTR/Gypsy 669 774 (8) 658256 277 21.4 1.8 0.0 chr2 213293062 213293117 (29906256) + MamGypLTR1a LTR/Gypsy 68 124 (660) 658952 237 40.0 0.9 3.5 chr2 213294134 213294247 (29905126) + MamGypLTR1b LTR/Gypsy 477 587 (195) 658956 698 29.5 27.1 2.7 chr2 213722801 213723463 (29475910) C LTR81 LTR/Gypsy (0) 1189 365 659505 277 28.9 5.8 2.2 chr2 214118451 214118588 (29080785) C MamGypLTR2b LTR/Gypsy (112) 810 668 659993 367 23.7 13.7 3.4 chr2 214217475 214217649 (28981724) C LTR81A LTR/Gypsy (7) 1343 1151 660121 225 38.0 3.1 4.7 chr2 214217981 214218107 (28981266) C LTR81 LTR/Gypsy (543) 646 522 660122 265 25.0 0.0 1.8 chr2 214380557 214380613 (28818760) + MamGypLTR1c LTR/Gypsy 388 443 (360) 660320 1414 31.1 10.3 2.9 chr2 214860207 214860925 (28338448) C MamGypLTR1a LTR/Gypsy (10) 774 3 660991 261 30.6 5.4 0.0 chr2 215502989 215503099 (27696274) C MamGypLTR1d LTR/Gypsy (9) 804 688 661871 276 29.8 10.1 10.4 chr2 215779982 215780356 (27419017) + LTR81B LTR/Gypsy 136 509 (884) 662297 584 31.2 4.5 13.2 chr2 216012294 216012555 (27186818) + LTR81C LTR/Gypsy 661 884 (269) 662601 584 31.2 4.5 13.2 chr2 216012712 216012909 (27186464) + LTR81C LTR/Gypsy 885 1079 (74) 662601 584 31.2 4.5 13.2 chr2 216013207 216013275 (27186098) + LTR81C LTR/Gypsy 1080 1145 (8) 662601 315 25.9 4.7 10.2 chr2 216479074 216479257 (26720116) + MamGypLTR1d LTR/Gypsy 16 206 (597) 663324 333 34.2 5.6 8.0 chr2 216480593 216480803 (26718570) + MamGypLTR1c LTR/Gypsy 518 726 (77) 663329 333 34.2 5.6 8.0 chr2 216481119 216481192 (26718181) + MamGypLTR1c LTR/Gypsy 727 796 (7) 663329 241 26.7 6.9 0.0 chr2 216607553 216607653 (26591720) C MamGypLTR1a LTR/Gypsy (28) 756 649 663515 460 29.6 3.2 1.3 chr2 216627182 216627335 (26572038) C LTR81C LTR/Gypsy (453) 700 544 663540 228 17.4 2.2 0.0 chr2 216731260 216731305 (26468068) + MamGypLTR1b LTR/Gypsy 700 746 (36) 663696 235 27.7 10.3 3.4 chr2 217101350 217101495 (26097878) + MamGypLTR1b LTR/Gypsy 279 434 (348) 664281 300 29.1 3.7 3.7 chr2 217739849 217739955 (25459418) + MamGypLTR1a LTR/Gypsy 5 111 (673) 665423 227 28.6 2.9 0.0 chr2 217980329 217980398 (25218975) C MamGypLTR1c LTR/Gypsy (24) 779 708 665778 590 27.9 13.4 6.5 chr2 218224873 218225179 (24974194) + MamGypLTR3 LTR/Gypsy 478 805 (34) 666111 1003 31.8 2.9 6.4 chr2 218300816 218301393 (24897980) + LTR81C LTR/Gypsy 38 595 (558) 666214 304 23.6 1.4 0.0 chr2 218318052 218318123 (24881250) C LTR81 LTR/Gypsy (20) 1169 1097 666242 551 26.6 2.1 4.8 chr2 218318126 218318311 (24881062) C LTR81B LTR/Gypsy (216) 1177 997 666243 228 30.4 2.1 5.2 chr2 218333158 218333254 (24866119) C MamGypLTR1c LTR/Gypsy (223) 580 487 666264 443 32.5 10.8 4.7 chr2 218401286 218401711 (24797662) + MamGypLTR1b LTR/Gypsy 324 775 (7) 666362 255 30.3 9.1 0.9 chr2 218459106 218459215 (24740158) C MamGypLTR1a LTR/Gypsy (194) 609 491 666444 524 22.8 10.6 4.2 chr2 218459337 218459478 (24739895) C MamGypLTR1a LTR/Gypsy (539) 245 95 666444 367 23.6 15.0 2.0 chr2 218460008 218460154 (24739219) + MamGypLTR2c LTR/Gypsy 901 1066 (2) 666446 700 27.5 32.6 5.0 chr2 218619559 218620155 (24579218) C MamGypLTR1b LTR/Gypsy (2) 780 19 666710 389 26.5 7.5 2.5 chr2 219686868 219687026 (23512347) + MamGypLTR1c LTR/Gypsy 637 803 (0) 668583 305 23.8 10.8 2.5 chr2 219809532 219809694 (23389679) + MamGypLTR1a LTR/Gypsy 132 311 (471) 668788 277 30.8 6.7 0.0 chr2 220486600 220486703 (22712670) C MamGypLTR1d LTR/Gypsy (8) 795 685 669872 534 28.2 11.0 2.7 chr2 220486781 220487048 (22712325) C MamGypLTR1d LTR/Gypsy (505) 277 3 669872 597 26.4 2.7 7.7 chr2 220638443 220638692 (22560681) + MamGypLTR1b LTR/Gypsy 3 231 (553) 670106 361 33.9 7.2 4.1 chr2 220794308 220794599 (22404774) + MamGypLTR3 LTR/Gypsy 159 459 (380) 670355 426 30.9 5.7 2.9 chr2 220794665 220794804 (22404569) + MamGypLTR3 LTR/Gypsy 696 839 (0) 670355 540 20.2 0.0 0.9 chr2 221113965 221114069 (22085304) C MamGypLTR1b LTR/Gypsy (8) 774 671 670876 289 29.7 1.0 1.9 chr2 221434819 221434921 (21764452) C LTR81B LTR/Gypsy (19) 1331 1230 671335 615 26.9 6.0 2.4 chr2 221435678 221435928 (21763445) C LTR81B LTR/Gypsy (969) 424 165 671335 332 32.8 0.0 6.5 chr2 221501478 221501601 (21697772) + MamGypLTR1b LTR/Gypsy 601 716 (66) 671431 240 32.8 7.6 0.0 chr2 221761933 221762051 (21437322) C MamGypLTR1b LTR/Gypsy (32) 750 623 671803 272 27.2 2.6 8.5 chr2 221780723 221780911 (21418462) + MamGypLTR2b LTR/Gypsy 730 907 (15) 671832 801 23.8 1.5 0.5 chr2 221953519 221953721 (21245652) + MamGypLTR2c LTR/Gypsy 844 1048 (20) 672075 353 28.4 21.7 3.1 chr2 221962720 221962997 (21236376) C LTR81B LTR/Gypsy (4) 1389 839 672084 283 29.4 0.9 5.6 chr2 222212962 222213069 (20986304) + MamGypLTR3 LTR/Gypsy 524 626 (213) 672504 424 31.8 5.2 4.3 chr2 222576521 222576753 (20622620) + MamGypLTR1a LTR/Gypsy 1 235 (549) 673040 289 33.1 14.5 0.0 chr2 222576823 222576994 (20622379) + MamGypLTR1a LTR/Gypsy 398 594 (190) 673040 322 34.7 4.8 0.7 chr2 222577068 222577212 (20622161) + MamGypLTR1a LTR/Gypsy 627 777 (5) 673040 270 29.9 2.8 5.6 chr2 222889035 222889176 (20310197) + MamGypLTR2b LTR/Gypsy 785 922 (0) 673491 264 32.0 20.6 0.0 chr2 222974632 222974825 (20224548) C LTR81B LTR/Gypsy (3) 1390 1200 673635 488 31.0 5.6 0.9 chr2 222974880 222975094 (20224279) C LTR81B LTR/Gypsy (384) 1009 785 673635 941 27.0 9.3 8.8 chr2 222975173 222975752 (20223621) C LTR81B LTR/Gypsy (810) 583 1 673635 938 30.2 17.6 5.3 chr2 223654258 223654373 (19545000) + LTR81B LTR/Gypsy 374 510 (883) 674711 938 30.2 17.6 5.3 chr2 223654432 223654917 (19544456) + LTR81B LTR/Gypsy 511 1077 (316) 674711 938 30.2 17.6 5.3 chr2 223655248 223655406 (19543967) + LTR81B LTR/Gypsy 1078 1265 (128) 674711 938 30.2 17.6 5.3 chr2 223656128 223656231 (19543142) + LTR81B LTR/Gypsy 1266 1348 (45) 674711 394 27.5 12.3 7.5 chr2 223688266 223688493 (19510880) C MamGypLTR3 LTR/Gypsy (2) 837 599 674775 316 33.6 7.9 5.6 chr2 223985636 223985887 (19213486) + MamGypLTR3 LTR/Gypsy 574 831 (8) 675248 286 27.1 2.5 4.0 chr2 224236427 224236575 (18962798) C MamGypLTR2b LTR/Gypsy (76) 846 659 675589 550 31.8 8.9 7.5 chr2 224306539 224306593 (18892780) C MamGypLTR1b LTR/Gypsy (27) 755 701 675693 550 31.8 8.9 7.5 chr2 224306892 224307317 (18892056) C MamGypLTR1b LTR/Gypsy (82) 700 267 675693 241 27.5 27.8 2.5 chr2 224332929 224332986 (18866387) C LTR81B LTR/Gypsy (127) 1026 954 675734 659 29.6 3.0 11.2 chr2 224334471 224334972 (18864401) C LTR81B LTR/Gypsy (932) 461 1 675734 388 29.9 11.3 7.8 chr2 224414650 224415022 (18784351) C LTR81C LTR/Gypsy (37) 1116 731 675849 385 31.3 3.0 0.8 chr2 224416399 224416530 (18782843) C LTR81C LTR/Gypsy (978) 175 41 675849 237 28.9 17.1 2.0 chr2 224446450 224446601 (18752772) C LTR81B LTR/Gypsy (168) 1225 1051 675908 551 30.0 6.9 9.1 chr2 225321171 225321679 (17877694) + LTR81B LTR/Gypsy 13 510 (883) 677351 324 28.5 4.1 7.6 chr2 226155884 226156054 (17043319) + LTR81A LTR/Gypsy 20 184 (1166) 678654 302 31.0 9.8 4.2 chr2 226242970 226243205 (16956168) + MamGypLTR1a LTR/Gypsy 3 251 (533) 678774 239 35.2 7.4 2.7 chr2 226498792 226498940 (16700433) + MamGypLTR1a LTR/Gypsy 221 376 (408) 679131 285 28.6 0.8 4.3 chr2 226900271 226900287 (16299086) + LTR81AB LTR/Gypsy 8 23 (255) 679709 285 28.6 0.8 4.3 chr2 226902960 226903058 (16296315) + LTR81AB LTR/Gypsy 24 120 (158) 679709 243 25.7 1.4 2.8 chr2 226903165 226903236 (16296137) + LTR81AB LTR/Gypsy 158 228 (961) 679709 245 22.8 18.9 5.2 chr2 227283405 227283557 (15915816) + MamGypLTR1d LTR/Gypsy 40 213 (600) 680280 483 31.3 12.7 7.9 chr2 227386413 227386828 (15812545) C LTR81B LTR/Gypsy (15) 1378 943 680421 339 34.1 12.1 3.3 chr2 227427411 227427625 (15771748) C MamGypLTR2c LTR/Gypsy (679) 389 156 680473 394 29.5 6.0 0.0 chr2 227504853 227505001 (15694372) + MamGypLTR1d LTR/Gypsy 654 811 (2) 680587 285 26.6 15.2 0.0 chr2 227518518 227518596 (15680777) + MamGyp-int LTR/Gypsy 3659 3749 (1313) 680606 238 26.8 23.9 0.0 chr2 227606096 227606233 (15593140) + MamGypLTR1c LTR/Gypsy 159 329 (474) 680750 246 24.1 1.7 0.0 chr2 228531049 228531106 (14668267) C LTR81A LTR/Gypsy (1052) 298 240 682201 248 31.8 4.0 3.4 chr2 228728685 228728860 (14470513) + MamGypLTR2b LTR/Gypsy 656 832 (90) 682595 364 30.7 10.2 4.3 chr2 229339793 229340027 (13859346) C MamGypLTR2b LTR/Gypsy (2) 920 672 683463 793 33.0 6.8 6.4 chr2 229727964 229728741 (13470632) C LTR81A LTR/Gypsy (8) 1342 403 684023 232 23.3 3.1 7.2 chr2 229728839 229728935 (13470438) C LTR81 LTR/Gypsy (1077) 112 20 684024 276 30.5 14.4 3.1 chr2 231058566 231058856 (12140517) + LTR81A LTR/Gypsy 197 520 (830) 686132 301 23.7 11.0 5.0 chr2 231067775 231067899 (12131474) + LTR81C LTR/Gypsy 472 596 (557) 686150 364 22.1 0.6 12.9 chr2 231751879 231752049 (11447324) C MamGypLTR2b LTR/Gypsy (8) 914 765 687100 262 23.9 1.4 0.0 chr2 231766829 231766899 (11432474) C MamGypLTR3 LTR/Gypsy (0) 839 768 687128 322 28.6 4.7 6.7 chr2 231766969 231767118 (11432255) C MamGypLTR3 LTR/Gypsy (195) 644 498 687128 344 31.1 13.6 3.5 chr2 231768641 231768897 (11430476) + MamGypLTR1b LTR/Gypsy 459 741 (41) 687131 410 22.2 8.4 9.0 chr2 232157860 232158037 (11041336) C MamGypLTR1d LTR/Gypsy (0) 813 637 687825 307 30.1 15.8 2.1 chr2 232158121 232158289 (11041084) C MamGypLTR1d LTR/Gypsy (335) 478 303 687825 542 28.5 17.6 1.7 chr2 232274878 232275166 (10924207) C MamGypLTR3 LTR/Gypsy (25) 814 480 688017 489 32.9 7.7 5.2 chr2 232419804 232420166 (10779207) + MamGypLTR1d LTR/Gypsy 151 522 (291) 688329 346 25.6 9.6 5.1 chr2 232585847 232586023 (10613350) + LTR81AB LTR/Gypsy 51 235 (43) 688696 1038 25.0 7.0 7.5 chr2 232591208 232591605 (10607768) C LTR81A LTR/Gypsy (820) 530 135 688709 250 26.0 0.0 10.3 chr2 232749830 232749936 (10449437) + MamGypLTR3 LTR/Gypsy 505 600 (239) 689017 241 30.2 6.0 1.3 chr2 232805983 232806133 (10393240) C MamGypLTR1b LTR/Gypsy (7) 775 618 689120 257 33.1 10.6 1.1 chr2 233401878 233402057 (9797316) C MamGypLTR3 LTR/Gypsy (239) 600 404 689965 301 22.5 2.8 0.0 chr2 234718288 234718358 (8481015) C MamGypLTR1a LTR/Gypsy (684) 100 28 692063 369 27.3 5.2 8.5 chr2 234940032 234940243 (8259130) + LTR81B LTR/Gypsy 6 210 (1183) 692367 231 22.6 10.8 8.8 chr2 235096972 235097073 (8102300) C MamGypLTR1c LTR/Gypsy (133) 670 567 692616 234 30.8 5.0 5.0 chr2 235126044 235126183 (8073190) + MamGypLTR3 LTR/Gypsy 541 680 (159) 692658 440 14.3 4.7 2.3 chr2 235207898 235207983 (7991390) + MamGypLTR1b LTR/Gypsy 1 88 (694) 692798 404 26.5 15.4 10.0 chr2 235498358 235498469 (7700904) + MamGypLTR1c LTR/Gypsy 36 140 (673) 693288 404 26.5 15.4 10.0 chr2 235498495 235498700 (7700673) + MamGypLTR1c LTR/Gypsy 140 371 (442) 693288 325 26.2 8.6 1.6 chr2 235499548 235499675 (7699698) + MamGypLTR1c LTR/Gypsy 664 800 (13) 693288 280 28.6 8.0 4.5 chr2 235505410 235505585 (7693788) + LTR81A LTR/Gypsy 1 182 (1168) 693297 230 34.0 7.2 3.1 chr2 235760746 235760939 (7438434) C MamGypLTR1a LTR/Gypsy (344) 440 239 693710 338 21.8 0.0 3.7 chr2 236118262 236118342 (7081031) C LTR81 LTR/Gypsy (1094) 95 18 694235 282 19.3 10.6 2.4 chr2 236152023 236152107 (7047266) C MamGypLTR1c LTR/Gypsy (711) 92 1 694292 442 22.7 6.7 1.5 chr2 237279238 237279371 (5920002) + MamGypLTR1a LTR/Gypsy 622 762 (22) 695901 303 20.9 3.2 2.1 chr2 237371485 237371577 (5827796) + LTR81C LTR/Gypsy 936 1029 (124) 696012 719 32.0 10.0 7.5 chr2 237728836 237729545 (5469828) + MamGypLTR2b LTR/Gypsy 195 922 (0) 696478 369 33.0 19.7 2.9 chr2 237822944 237823252 (5376121) + MamGypLTR1a LTR/Gypsy 135 495 (289) 696609 281 28.9 2.8 1.9 chr2 237823347 237823452 (5375921) + MamGypLTR1a LTR/Gypsy 666 772 (12) 696609 586 32.2 14.9 3.3 chr2 238413498 238414411 (4784962) C LTR81C LTR/Gypsy (8) 1145 126 697352 284 25.8 3.1 1.0 chr2 238500032 238500129 (4699244) C MamGypLTR1c LTR/Gypsy (56) 747 648 697461 413 29.5 2.3 9.7 chr2 238500483 238500612 (4698761) + LTR81A LTR/Gypsy 22 142 (1208) 697462 413 29.5 2.3 9.7 chr2 238500908 238501035 (4698338) + LTR81A LTR/Gypsy 143 261 (1089) 697462 230 28.9 12.2 4.7 chr2 238501289 238501502 (4697871) + LTR81A LTR/Gypsy 729 958 (231) 697462 329 31.9 12.7 5.8 chr2 239483046 239483525 (3715848) C MamGypLTR3 LTR/Gypsy (102) 737 225 698853 301 27.6 3.4 2.5 chr2 239488731 239488849 (3710524) + MamGypLTR2c LTR/Gypsy 78 197 (871) 698862 287 26.5 14.2 7.8 chr2 239524452 239524697 (3674676) C LTR81A LTR/Gypsy (1107) 286 22 698898 352 23.0 1.4 1.0 chr2 239924701 239924798 (3274575) C MamGypLTR1a LTR/Gypsy (51) 752 653 699321 859 26.2 15.5 1.0 chr2 239924988 239925291 (3274082) C MamGypLTR1a LTR/Gypsy (417) 367 20 699321 442 30.3 5.8 8.1 chr2 240683258 240683566 (2515807) + MamGypLTR1c LTR/Gypsy 41 342 (461) 700076 378 33.6 5.1 7.1 chr2 240850164 240850416 (2348957) C MamGypLTR3 LTR/Gypsy (0) 839 592 700223 326 28.1 2.2 6.7 chr2 243020434 243020612 (178761) + LTR81B LTR/Gypsy 13 183 (1210) 702741 294 30.6 4.8 4.0 chr3 650558 650683 (197371747) C MamGypLTR3 LTR/Gypsy (243) 596 470 703804 313 36.3 0.6 1.3 chr3 952202 952360 (197070070) + LTR81C LTR/Gypsy 893 1050 (103) 704178 344 24.3 6.2 4.5 chr3 1513498 1513609 (196508821) + LTR81A LTR/Gypsy 65 178 (1172) 705018 585 29.4 16.7 7.7 chr3 2087647 2088310 (195934120) C MamGypLTR2c LTR/Gypsy (34) 1034 311 705778 305 32.1 7.5 1.5 chr3 2088338 2088470 (195933960) C MamGypLTR2c LTR/Gypsy (827) 241 101 705778 741 28.7 28.5 1.9 chr3 2197727 2198279 (195824151) + MamGypLTR3 LTR/Gypsy 123 821 (18) 705937 343 34.1 14.1 2.5 chr3 2730762 2731080 (195291350) C MamGypLTR1b LTR/Gypsy (34) 748 393 706716 399 36.3 4.1 6.0 chr3 3404822 3405135 (194617295) + MamGypLTR3 LTR/Gypsy 78 385 (454) 707783 225 32.4 1.7 6.1 chr3 3408513 3408627 (194613803) + LTR81A LTR/Gypsy 1036 1145 (205) 707787 287 28.3 5.4 2.3 chr3 3608377 3608506 (194413924) + MamGypLTR1a LTR/Gypsy 7 140 (642) 708054 476 29.1 9.6 1.1 chr3 3608710 3608886 (194413544) + MamGypLTR1a LTR/Gypsy 553 744 (40) 708054 231 31.2 2.1 1.1 chr3 3965628 3965721 (194056709) C MamGypLTR1a LTR/Gypsy (613) 171 77 708605 260 32.5 1.5 2.0 chr3 4290508 4290652 (193731778) + LTR81C LTR/Gypsy 512 655 (534) 709078 346 22.1 6.8 7.5 chr3 5119262 5119341 (192903089) + MamGypLTR2b LTR/Gypsy 725 799 (123) 710493 346 22.1 6.8 7.5 chr3 5119616 5119681 (192902749) + MamGypLTR2b LTR/Gypsy 800 870 (52) 710493 266 36.1 9.3 1.7 chr3 6273660 6273831 (191748599) + MamGypLTR3 LTR/Gypsy 69 253 (586) 712252 255 27.3 5.0 0.0 chr3 6451350 6451448 (191570982) C MamGypLTR2b LTR/Gypsy (49) 873 770 712489 540 34.0 7.5 6.8 chr3 6566872 6567401 (191455029) C MamGypLTR1a LTR/Gypsy (18) 766 233 712654 362 33.5 1.0 4.8 chr3 6654939 6655145 (191367285) + MamGypLTR1b LTR/Gypsy 7 205 (577) 712754 235 8.6 0.0 2.8 chr3 6784672 6784707 (191237723) C LTR81B LTR/Gypsy (1170) 223 189 712956 467 25.2 5.3 1.5 chr3 7010327 7010459 (191011971) + MamGypLTR1b LTR/Gypsy 29 166 (616) 713296 228 28.7 1.7 2.2 chr3 7463044 7463142 (190559288) C MamGypLTR1d LTR/Gypsy (0) 813 701 714005 234 33.6 2.6 3.5 chr3 7850347 7850460 (190171970) C MamGypLTR1a LTR/Gypsy (407) 377 265 714590 650 24.1 10.8 4.1 chr3 8471462 8471729 (189550701) + MamGypLTR1a LTR/Gypsy 1 286 (498) 715532 326 31.5 8.3 3.3 chr3 8471798 8472037 (189550393) + MamGypLTR1a LTR/Gypsy 483 734 (48) 715532 262 16.3 15.5 5.2 chr3 9279945 9280041 (188742389) + MamGypLTR1d LTR/Gypsy 11 117 (696) 716971 460 26.1 6.6 6.0 chr3 9280614 9280781 (188741649) + MamGypLTR1d LTR/Gypsy 535 722 (91) 716972 460 24.0 6.3 6.3 chr3 9281076 9281158 (188741272) + MamGypLTR1d LTR/Gypsy 723 800 (13) 716972 524 27.7 11.2 14.6 chr3 9359647 9360276 (188662154) C MamGypLTR1d LTR/Gypsy (9) 794 178 717134 524 23.4 11.8 16.9 chr3 9360592 9360737 (188661693) C MamGypLTR1d LTR/Gypsy (635) 178 33 717134 238 30.3 1.3 0.0 chr3 9670153 9670228 (188352202) + MamGypLTR2b LTR/Gypsy 665 741 (181) 717770 240 27.2 12.6 0.0 chr3 11188711 11188813 (186833617) + MamGypLTR1d LTR/Gypsy 685 800 (13) 720860 314 32.6 8.6 2.5 chr3 12004279 12004476 (186017954) + MamGypLTR2c LTR/Gypsy 155 364 (704) 722365 287 29.9 3.7 1.5 chr3 12005201 12005336 (186017094) + MamGypLTR2c LTR/Gypsy 904 1042 (26) 722365 318 30.4 7.4 5.0 chr3 13503187 13503428 (184519002) + MamGypLTR3 LTR/Gypsy 490 737 (102) 725167 379 32.3 9.4 1.5 chr3 13507430 13507630 (184514800) C MamGypLTR1d LTR/Gypsy (0) 813 597 725176 451 26.1 7.7 2.8 chr3 15186596 15186776 (182835654) + MamGypLTR1b LTR/Gypsy 590 779 (3) 728079 1230 29.9 14.7 6.2 chr3 15505439 15506120 (182516310) + MamGypLTR1b LTR/Gypsy 10 749 (33) 728684 608 26.4 14.4 0.9 chr3 15580627 15580855 (182441575) + MamGypLTR2c LTR/Gypsy 305 564 (504) 728814 361 22.5 11.3 3.2 chr3 15583249 15583372 (182439058) + MamGypLTR2c LTR/Gypsy 775 908 (160) 728820 227 19.0 28.2 1.2 chr3 15583545 15583629 (182438801) + MamGypLTR2c LTR/Gypsy 961 1068 (0) 728820 615 23.5 11.1 6.0 chr3 15596269 15596503 (182425927) C MamGypLTR1c LTR/Gypsy (0) 803 557 728834 240 24.1 6.9 0.0 chr3 16054565 16054622 (181967808) + MamGypLTR1c LTR/Gypsy 737 798 (5) 729586 566 31.4 6.9 3.1 chr3 16077236 16077495 (181944935) C MamGypLTR2c LTR/Gypsy (776) 292 23 729606 411 31.8 9.4 4.3 chr3 16662570 16662943 (181359487) C LTR81C LTR/Gypsy (5) 1148 756 730552 247 33.8 1.3 0.0 chr3 16730258 16730414 (181292016) C MamGypLTR2b LTR/Gypsy (72) 850 692 730648 237 27.6 5.8 0.0 chr3 16740307 16740393 (181282037) C MamGypLTR2c LTR/Gypsy (971) 97 6 730665 307 26.4 0.0 1.1 chr3 17064430 17064517 (180957913) C LTR81B LTR/Gypsy (221) 1172 1086 731062 235 30.3 13.7 5.7 chr3 17064725 17064830 (180957600) C LTR81B LTR/Gypsy (1016) 377 274 731062 235 30.3 13.7 5.7 chr3 17065184 17065251 (180957179) C LTR81B LTR/Gypsy (1120) 273 190 731062 327 31.4 11.5 4.6 chr3 17212223 17212439 (180809991) + MamGypLTR2c LTR/Gypsy 742 973 (95) 731267 307 23.2 11.0 0.0 chr3 17845032 17845113 (180177317) C LTR81C LTR/Gypsy (200) 953 863 732164 878 26.4 10.1 5.3 chr3 17848277 17848692 (180173738) C LTR81B LTR/Gypsy (936) 457 22 732172 526 25.1 9.5 6.1 chr3 18164986 18165248 (179857182) C LTR81B LTR/Gypsy (1103) 290 19 732649 244 25.4 9.5 8.8 chr3 18186673 18186819 (179835611) C MamGypLTR1c LTR/Gypsy (74) 729 582 732673 289 33.7 10.2 2.4 chr3 18187305 18187471 (179834959) C MamGypLTR2c LTR/Gypsy (696) 372 193 732675 292 25.9 15.8 1.5 chr3 18509831 18509963 (179512467) C LTR81 LTR/Gypsy (38) 1115 964 733064 1540 30.4 10.8 4.7 chr3 18510533 18511054 (179511376) C LTR81 LTR/Gypsy (212) 977 402 733064 1540 30.4 10.8 4.7 chr3 18511473 18511708 (179510722) C LTR81 LTR/Gypsy (788) 401 173 733064 508 30.0 5.9 6.6 chr3 18512196 18512481 (179509949) C LTR81B LTR/Gypsy (1056) 337 54 733069 316 31.4 5.0 5.0 chr3 18579256 18579493 (179442937) C MamGypLTR2b LTR/Gypsy (15) 907 670 733157 303 38.4 0.0 0.9 chr3 18585751 18585863 (179436567) C MamGypLTR1c LTR/Gypsy (220) 583 472 733166 274 26.4 0.0 7.1 chr3 18641599 18641696 (179380734) C LTR81 LTR/Gypsy (3) 1186 1096 733236 238 23.8 25.4 0.0 chr3 18641947 18642009 (179380421) C LTR81 LTR/Gypsy (419) 770 692 733236 264 34.9 5.7 0.0 chr3 18843282 18843387 (179179043) + MamGypLTR1a LTR/Gypsy 386 497 (287) 733540 274 34.0 17.3 2.3 chr3 18850543 18850675 (179171755) + MamGypLTR1d LTR/Gypsy 372 506 (307) 733551 274 34.0 17.3 2.3 chr3 18850985 18851151 (179171279) + MamGypLTR1d LTR/Gypsy 507 716 (97) 733551 262 36.2 6.4 3.5 chr3 18873350 18873471 (179148959) + MamGypLTR1a LTR/Gypsy 418 540 (244) 733588 262 36.2 6.4 3.5 chr3 18873792 18873871 (179148559) + MamGypLTR1a LTR/Gypsy 541 626 (158) 733588 553 28.9 8.9 9.5 chr3 18962127 18962622 (179059808) + MamGypLTR1d LTR/Gypsy 1 493 (320) 733726 293 24.5 3.7 4.7 chr3 18996942 18997048 (179025382) C MamGypLTR2c LTR/Gypsy (95) 973 868 733766 645 28.9 5.3 2.7 chr3 18998248 18998546 (179023884) C LTR81A LTR/Gypsy (1020) 330 24 733768 733 29.7 11.1 7.5 chr3 19055387 19055972 (178966458) C MamGypLTR1a LTR/Gypsy (6) 778 172 733831 443 29.8 5.1 3.0 chr3 19688207 19688403 (178334027) C MamGypLTR1d LTR/Gypsy (10) 803 603 734646 326 27.1 2.1 0.0 chr3 20439440 20439535 (177582895) + LTR81 LTR/Gypsy 1092 1189 (0) 735843 828 35.4 9.7 6.2 chr3 20445681 20446307 (177576123) + LTR81B LTR/Gypsy 518 1166 (227) 735857 268 21.8 1.2 3.7 chr3 20686511 20686591 (177335839) C MamGypLTR2b LTR/Gypsy (2) 920 842 736119 495 36.5 5.6 5.6 chr3 20736757 20737186 (177285244) C MamGypLTR3 LTR/Gypsy (73) 766 337 736194 590 33.9 5.4 7.7 chr3 20793927 20794278 (177228152) C MamGypLTR3 LTR/Gypsy (17) 822 479 736270 229 30.5 1.8 3.7 chr3 20879111 20879219 (177143211) C LTR81A LTR/Gypsy (1234) 116 10 736385 336 32.1 5.0 9.5 chr3 21082716 21082977 (176939453) + MamGypLTR3 LTR/Gypsy 590 839 (0) 736634 299 25.6 2.2 0.0 chr3 21522577 21522666 (176499764) + MamGypLTR2b LTR/Gypsy 752 843 (79) 737158 351 29.0 1.2 6.1 chr3 21529439 21529603 (176492827) C LTR81A LTR/Gypsy (37) 1313 1157 737172 231 23.2 7.8 4.4 chr3 21686186 21686275 (176336155) + MamGypLTR1c LTR/Gypsy 703 795 (8) 737384 718 29.8 10.5 4.2 chr3 21703640 21704021 (176318409) + MamGypLTR1c LTR/Gypsy 398 803 (0) 737416 744 25.5 8.2 2.1 chr3 22129361 22129752 (175892678) + LTR81A LTR/Gypsy 8 413 (980) 737989 424 26.8 16.9 6.7 chr3 22130254 22130625 (175891805) + LTR81A LTR/Gypsy 978 1387 (6) 737989 426 31.1 8.0 4.3 chr3 22473874 22474149 (175548281) C LTR81A LTR/Gypsy (5) 1345 1060 738445 501 34.0 5.5 5.2 chr3 22623906 22624683 (175397747) + LTR81C LTR/Gypsy 1 794 (556) 738667 271 23.3 2.1 4.3 chr3 22625069 22625162 (175397268) + MamGypLTR2c LTR/Gypsy 854 945 (123) 738668 257 29.9 1.4 8.8 chr3 22759226 22759372 (175263058) + MamGypLTR1b LTR/Gypsy 647 782 (0) 738830 227 23.7 5.1 0.0 chr3 22777585 22777643 (175244787) C LTR81A LTR/Gypsy (66) 1284 1223 738857 656 34.0 14.7 2.3 chr3 22777851 22778741 (175243689) C LTR81A LTR/Gypsy (341) 1009 10 738858 226 19.0 5.1 1.7 chr3 22927596 22927654 (175094776) + LTR81A LTR/Gypsy 84 144 (1206) 739034 684 24.4 0.6 0.6 chr3 23661158 23661314 (174361116) C MamGypLTR2c LTR/Gypsy (28) 1040 884 740117 368 28.8 13.6 5.5 chr3 23661514 23661785 (174360645) C MamGypLTR2c LTR/Gypsy (620) 448 155 740117 615 28.4 11.7 3.7 chr3 23662939 23663263 (174359167) C MamGypLTR1b LTR/Gypsy (46) 736 386 740120 367 28.4 17.5 5.9 chr3 23785742 23786096 (174236334) + MamGypLTR1c LTR/Gypsy 340 735 (68) 740379 430 25.0 10.0 1.3 chr3 24648247 24648396 (173374034) + MamGypLTR1b LTR/Gypsy 617 779 (3) 741778 287 35.3 8.4 7.4 chr3 24688003 24688406 (173334024) + MamGypLTR1a LTR/Gypsy 364 771 (13) 741821 337 29.8 11.2 7.9 chr3 25016980 25017194 (173005236) C LTR81B LTR/Gypsy (12) 1381 1160 742318 251 30.8 13.5 1.6 chr3 25058084 25058268 (172964162) C MamGypLTR1a LTR/Gypsy (4) 780 574 742367 355 29.1 8.0 2.9 chr3 25204565 25204702 (172817728) + MamGypLTR1b LTR/Gypsy 608 752 (30) 742571 269 26.8 15.8 0.0 chr3 25928779 25928860 (172093570) + MamGypLTR3 LTR/Gypsy 272 366 (473) 743607 238 22.8 1.0 9.8 chr3 26011097 26011198 (172011232) C MamGypLTR2b LTR/Gypsy (24) 898 806 743737 296 34.4 4.7 6.9 chr3 26022424 26022698 (171999732) C MamGypLTR2b LTR/Gypsy (610) 312 44 743756 356 28.5 9.5 2.0 chr3 26045131 26045277 (171977153) + MamGypLTR3 LTR/Gypsy 682 839 (0) 743774 402 27.5 12.1 2.8 chr3 26103582 26103869 (171918561) C MamGypLTR1b LTR/Gypsy (324) 458 107 743842 227 25.4 4.9 6.9 chr3 26399283 26399426 (171623004) + MamGypLTR2b LTR/Gypsy 782 922 (0) 744196 509 30.5 9.1 12.1 chr3 26502946 26503407 (171519023) + LTR81B LTR/Gypsy 3 450 (943) 744338 421 28.4 5.5 8.6 chr3 26504119 26504465 (171517965) + LTR81B LTR/Gypsy 863 1290 (60) 744338 229 14.6 12.5 0.0 chr3 27119911 27119958 (170902472) + LTR81B LTR/Gypsy 99 152 (1241) 745161 281 26.9 13.7 4.4 chr3 27179071 27179253 (170843177) + MamGypLTR1c LTR/Gypsy 1 200 (603) 745240 240 24.1 3.8 1.2 chr3 27228865 27228944 (170793486) + MamGypLTR2b LTR/Gypsy 806 887 (35) 745302 232 31.9 16.6 4.6 chr3 27682983 27683199 (170339231) + MamGypLTR3 LTR/Gypsy 506 748 (91) 746091 314 30.7 10.7 1.2 chr3 27967460 27967627 (170054803) + MamGypLTR1c LTR/Gypsy 620 803 (0) 746583 1100 31.6 15.3 3.5 chr3 28120276 28121076 (169901354) C LTR81 LTR/Gypsy (10) 1143 293 746812 1100 34.1 7.5 8.3 chr3 28121361 28121528 (169900902) C LTR81 LTR/Gypsy (883) 306 139 746812 301 30.0 4.0 1.0 chr3 28503485 28503585 (169518845) + MamGypLTR1b LTR/Gypsy 46 149 (633) 747346 1037 33.4 4.7 2.4 chr3 28503719 28504141 (169518289) + MamGypLTR1b LTR/Gypsy 350 782 (0) 747346 235 39.3 4.9 2.8 chr3 29060976 29061119 (168961311) C MamGypLTR2b LTR/Gypsy (227) 695 549 748162 398 28.9 6.4 3.5 chr3 30152651 30152859 (167869571) C MamGypLTR1c LTR/Gypsy (0) 813 600 749603 503 35.0 16.7 1.9 chr3 30199904 30200334 (167822096) + MamGypLTR1a LTR/Gypsy 290 784 (0) 749677 242 27.4 2.4 1.2 chr3 30234242 30234326 (167788104) C MamGypLTR2b LTR/Gypsy (47) 875 790 749730 294 35.3 4.5 5.0 chr3 30431353 30431645 (167590785) + MamGypLTR1c LTR/Gypsy 110 529 (274) 749984 363 31.6 5.6 11.8 chr3 30431850 30432136 (167590294) + MamGypLTR1c LTR/Gypsy 535 803 (0) 749984 276 34.6 3.8 1.9 chr3 30449027 30449238 (167573192) + MamGypLTR2b LTR/Gypsy 707 922 (0) 750018 667 33.0 6.4 4.9 chr3 30742154 30742640 (167279790) C MamGypLTR1c LTR/Gypsy (0) 803 310 750450 714 30.2 9.2 2.6 chr3 30810538 30810843 (167211587) C MamGypLTR1b LTR/Gypsy (0) 782 457 750544 253 28.2 22.3 3.1 chr3 30810956 30811211 (167211219) C MamGypLTR1b LTR/Gypsy (477) 305 1 750544 395 23.4 10.3 0.7 chr3 30859830 30859984 (167162446) C MamGypLTR2b LTR/Gypsy (35) 887 718 750610 420 29.5 10.9 7.2 chr3 30920255 30920575 (167101855) C LTR81B LTR/Gypsy (29) 1364 1032 750678 451 27.5 11.3 5.8 chr3 30921244 30921571 (167100859) C LTR81B LTR/Gypsy (1033) 360 15 750678 284 33.3 2.0 1.0 chr3 31006996 31007095 (167015335) + MamGypLTR2c LTR/Gypsy 400 500 (568) 750821 267 23.3 6.6 10.4 chr3 31029765 31029946 (166992484) + MamGypLTR1c LTR/Gypsy 16 190 (613) 750863 266 31.8 4.5 0.0 chr3 31065345 31065432 (166956998) C MamGypLTR1a LTR/Gypsy (82) 702 611 750924 228 17.9 0.0 11.1 chr3 31126517 31126579 (166895851) + LTR81B LTR/Gypsy 157 212 (1181) 751010 279 33.2 7.4 4.1 chr3 31133723 31133964 (166888466) C MamGypLTR2c LTR/Gypsy (55) 1013 764 751019 285 27.9 4.6 3.3 chr3 31135223 31135374 (166887056) C MamGypLTR2c LTR/Gypsy (850) 218 65 751019 256 26.5 16.1 4.6 chr3 31383478 31383651 (166638779) C MamGypLTR1c LTR/Gypsy (20) 783 590 751414 240 29.4 2.1 5.2 chr3 31464586 31464682 (166557748) C LTR81AB LTR/Gypsy (253) 900 807 751542 304 26.8 11.2 3.0 chr3 31464760 31465020 (166557410) C LTR81AB LTR/Gypsy (925) 468 175 751542 420 30.9 7.6 3.0 chr3 31541000 31541236 (166481194) + MamGypLTR1c LTR/Gypsy 542 789 (14) 751663 309 30.0 12.6 0.7 chr3 31831236 31831386 (166191044) + LTR81A LTR/Gypsy 1181 1349 (1) 752091 280 28.1 7.8 2.1 chr3 32082691 32082832 (165939598) + MamGypLTR2b LTR/Gypsy 773 922 (0) 752539 309 30.3 1.9 3.9 chr3 32286691 32286793 (165735637) C MamGypLTR1a LTR/Gypsy (650) 134 34 752939 269 24.0 5.9 2.0 chr3 33017418 33017519 (165004911) C MamGypLTR2b LTR/Gypsy (28) 894 789 754433 382 34.4 4.5 5.5 chr3 33159757 33160048 (164862382) C MamGyp-int LTR/Gypsy (4699) 363 75 754706 324 27.5 13.6 8.0 chr3 33160382 33160696 (164861734) C MamGypLTR1d LTR/Gypsy (431) 372 25 754707 245 25.7 3.3 5.8 chr3 33921684 33921803 (164100627) + MamGypLTR1a LTR/Gypsy 8 124 (660) 755986 255 34.5 3.2 5.1 chr3 33922496 33922712 (164099718) + MamGyp-int LTR/Gypsy 465 677 (4385) 755989 287 40.6 2.7 2.1 chr3 34293859 34294044 (163728386) C MamGypLTR3 LTR/Gypsy (377) 462 276 756525 848 36.0 8.9 3.5 chr3 34312197 34312932 (163709498) C LTR81 LTR/Gypsy (31) 1122 340 756557 438 27.1 14.6 1.7 chr3 34414176 34414408 (163608022) + LTR81A LTR/Gypsy 197 459 (891) 756688 307 25.0 6.7 0.9 chr3 34415307 34415411 (163607019) + LTR81A LTR/Gypsy 1243 1353 (40) 756688 248 29.7 4.0 1.3 chr3 34978605 34978679 (163043751) C MamGypLTR1b LTR/Gypsy (68) 714 638 757403 279 39.8 4.3 1.1 chr3 35065641 35065828 (162956602) C MamGypLTR1b LTR/Gypsy (229) 553 360 757527 529 22.8 3.2 2.4 chr3 35227415 35227540 (162794890) + LTR81A LTR/Gypsy 14 140 (1210) 757743 246 24.6 11.0 3.9 chr3 35592546 35592672 (162429758) C MamGypLTR1b LTR/Gypsy (20) 762 627 758207 282 37.5 6.3 6.1 chr3 35881016 35881521 (162140909) + MamGypLTR1b LTR/Gypsy 276 782 (0) 758515 572 35.9 0.0 1.1 chr3 36311715 36311900 (161710530) C MamGypLTR1a LTR/Gypsy (235) 549 366 759032 465 31.6 10.3 0.9 chr3 36312057 36312270 (161710160) C MamGypLTR1a LTR/Gypsy (515) 269 36 759032 495 30.5 11.5 2.6 chr3 36571226 36571331 (161451099) C LTR81A LTR/Gypsy (953) 397 284 759394 495 30.5 11.5 2.6 chr3 36571589 36571828 (161450602) C LTR81A LTR/Gypsy (1067) 283 20 759394 475 30.9 5.5 1.1 chr3 36704937 36705119 (161317311) + LTR81C LTR/Gypsy 17 207 (946) 759548 256 22.6 4.2 14.3 chr3 36705136 36705254 (161317176) + LTR81A LTR/Gypsy 1237 1343 (7) 759549 577 30.5 7.5 0.9 chr3 36739863 36740074 (161282356) + MamGypLTR1a LTR/Gypsy 7 232 (552) 759590 477 27.6 5.9 5.3 chr3 36740153 36740465 (161281965) + MamGypLTR1a LTR/Gypsy 352 722 (81) 759590 345 33.8 7.1 4.8 chr3 36740769 36740834 (161281596) + MamGypLTR1a LTR/Gypsy 723 795 (8) 759590 361 33.6 18.4 2.0 chr3 36749110 36749467 (161272963) + MamGypLTR1c LTR/Gypsy 384 800 (3) 759606 283 34.8 0.7 2.1 chr3 36849652 36849795 (161172635) + MamGypLTR1c LTR/Gypsy 626 767 (36) 759765 273 24.2 0.9 6.6 chr3 36864590 36864695 (161157735) + MamGypLTR1b LTR/Gypsy 14 113 (669) 759792 368 33.7 13.8 3.5 chr3 36864717 36865113 (161157317) + MamGypLTR1c LTR/Gypsy 340 777 (26) 759793 355 25.7 18.1 0.7 chr3 37239914 37240062 (160782368) + MamGypLTR1c LTR/Gypsy 1 175 (628) 760465 1592 26.2 9.1 3.8 chr3 38194499 38195045 (159827385) C LTR81A LTR/Gypsy (31) 1319 744 761867 501 31.6 11.8 4.2 chr3 38321974 38322122 (159700308) C MamGypLTR1a LTR/Gypsy (0) 784 613 762064 501 31.6 11.8 4.2 chr3 38322421 38322557 (159699873) C MamGypLTR1a LTR/Gypsy (172) 612 476 762064 380 36.6 0.0 3.6 chr3 38721420 38721558 (159300872) + MamGyp-int LTR/Gypsy 3909 4042 (1020) 762617 280 21.8 13.9 1.3 chr3 38789853 38789931 (159232499) C MamGypLTR2b LTR/Gypsy (8) 914 826 762706 366 33.3 4.1 9.0 chr3 38790541 38790784 (159231646) C MamGypLTR2b LTR/Gypsy (637) 285 54 762708 960 28.5 6.3 5.3 chr3 38868686 38869100 (159153330) C MamGypLTR1b LTR/Gypsy (0) 782 364 762802 366 31.7 8.4 3.6 chr3 38909770 38910018 (159112412) + LTR81B LTR/Gypsy 1 261 (1132) 762846 235 23.9 5.3 4.2 chr3 38910769 38910870 (159111560) C LTR81B LTR/Gypsy (1240) 110 2 762847 502 32.7 11.1 5.6 chr3 39071425 39072150 (158950280) + MamGypLTR1a LTR/Gypsy 1 776 (6) 763097 295 30.6 4.5 10.9 chr3 39200643 39200844 (158821586) C MamGypLTR1b LTR/Gypsy (213) 569 381 763266 341 17.5 6.2 0.0 chr3 39280132 39280211 (158742219) C MamGypLTR1d LTR/Gypsy (721) 92 8 763411 295 25.9 12.1 2.3 chr3 39295184 39295357 (158727073) + MamGypLTR1c LTR/Gypsy 342 532 (271) 763441 526 31.4 9.7 7.5 chr3 39533071 39533807 (158488623) + LTR81 LTR/Gypsy 145 844 (549) 763827 231 21.5 10.6 7.1 chr3 39891215 39891299 (158131131) + LTR81B LTR/Gypsy 290 377 (1016) 764289 432 33.4 8.7 6.1 chr3 40245974 40246352 (157776078) C LTR81AB LTR/Gypsy (23) 1130 742 764734 454 31.0 8.2 2.6 chr3 40246748 40246979 (157775451) C LTR81AB LTR/Gypsy (33) 245 1 764734 319 33.1 0.0 3.3 chr3 40276503 40276642 (157745788) C MamGypLTR3 LTR/Gypsy (31) 808 674 764780 511 23.6 24.7 5.1 chr3 40438099 40438353 (157584077) C MamGypLTR3 LTR/Gypsy (0) 839 535 765033 225 21.1 12.3 0.0 chr3 40588607 40588663 (157433767) C MamGypLTR1b LTR/Gypsy (551) 231 168 765333 268 26.2 1.6 10.2 chr3 40667234 40667420 (157355010) + MamGypLTR1c LTR/Gypsy 1 171 (642) 765456 514 26.8 5.7 1.6 chr3 40668384 40668576 (157353854) + MamGypLTR1c LTR/Gypsy 600 800 (3) 765456 296 29.8 15.9 11.4 chr3 40762114 40762799 (157259631) + MamGypLTR3 LTR/Gypsy 121 837 (2) 765585 286 28.2 3.9 8.4 chr3 40781981 40782158 (157240272) + LTR81AB LTR/Gypsy 7 176 (102) 765609 286 31.4 4.5 5.5 chr3 40782230 40782431 (157239999) + MamGypLTR2c LTR/Gypsy 79 278 (790) 765610 275 30.3 2.8 6.6 chr3 40898840 40898945 (157123485) + MamGyp-int LTR/Gypsy 4466 4567 (495) 765795 315 36.3 8.2 0.0 chr3 40899014 40899148 (157123282) + MamGyp-int LTR/Gypsy 4666 4811 (251) 765795 371 31.5 1.8 1.8 chr3 41026616 41026728 (156995702) + MamGyp-int LTR/Gypsy 1197 1309 (3753) 765936 640 29.0 9.0 2.9 chr3 41153312 41153588 (156868842) C MamGypLTR3 LTR/Gypsy (0) 839 546 766126 280 33.3 5.2 8.8 chr3 41195812 41196005 (156826425) + MamGyp-int LTR/Gypsy 634 820 (4242) 766192 254 27.2 5.3 2.1 chr3 41197285 41197378 (156825052) + MamGyp-int LTR/Gypsy 1549 1645 (3417) 766192 232 26.9 3.0 0.0 chr3 42271342 42271408 (155751022) + MamGypLTR2c LTR/Gypsy 813 881 (187) 767823 872 23.7 17.5 3.6 chr3 42378307 42378537 (155643893) + MamGypLTR1c LTR/Gypsy 20 285 (518) 767972 872 23.7 17.5 3.6 chr3 42378844 42378948 (155643482) + MamGypLTR1c LTR/Gypsy 286 403 (400) 767972 257 27.2 1.2 0.0 chr3 42379230 42379310 (155643120) + MamGypLTR1c LTR/Gypsy 717 798 (15) 767972 373 30.9 15.1 9.5 chr3 42389672 42390240 (155632190) + LTR81A LTR/Gypsy 630 1230 (120) 767985 310 25.2 1.3 1.2 chr3 42472603 42472698 (155549732) C MamGypLTR1d LTR/Gypsy (0) 813 707 768131 259 25.7 12.3 6.4 chr3 42474436 42474622 (155547808) C MamGypLTR1d LTR/Gypsy (604) 199 2 768131 268 29.0 8.4 6.5 chr3 42475823 42475929 (155546501) C MamGypLTR1d LTR/Gypsy (362) 451 343 768141 365 28.8 6.6 0.4 chr3 42519847 42520001 (155502429) + MamGypLTR1d LTR/Gypsy 620 792 (21) 768219 238 27.8 4.4 1.1 chr3 42534109 42534199 (155488231) + MamGypLTR1d LTR/Gypsy 99 192 (590) 768234 536 27.4 13.0 1.4 chr3 42534297 42534637 (155487793) + MamGypLTR1d LTR/Gypsy 372 801 (12) 768234 230 28.7 8.5 0.0 chr3 42770238 42770331 (155252099) + MamGypLTR2c LTR/Gypsy 444 545 (523) 768572 540 28.3 7.3 5.0 chr3 42886175 42886434 (155135996) C MamGypLTR1c LTR/Gypsy (14) 789 524 768784 299 30.1 8.2 7.5 chr3 42886468 42886722 (155135708) C MamGypLTR1c LTR/Gypsy (278) 535 279 768784 423 25.3 11.7 7.3 chr3 43041946 43042218 (154980212) C LTR81B LTR/Gypsy (1105) 288 4 769012 270 31.4 11.5 10.3 chr3 43193613 43194002 (154828428) C MamGypLTR1d LTR/Gypsy (418) 395 1 769223 777 27.3 13.8 7.3 chr3 43284470 43284868 (154737562) + LTR81B LTR/Gypsy 956 1380 (13) 769357 419 30.7 7.4 5.1 chr3 43403500 43403756 (154618674) C MamGypLTR3 LTR/Gypsy (0) 839 577 769524 264 28.5 1.0 13.1 chr3 43718296 43718501 (154303929) + LTR81B LTR/Gypsy 6 186 (1207) 769943 345 28.4 9.9 1.8 chr3 43805960 43806179 (154216251) C MamGypLTR2b LTR/Gypsy (36) 886 584 770087 250 32.3 3.1 0.0 chr3 43806944 43807039 (154215391) C MamGypLTR2b LTR/Gypsy (675) 393 295 770087 441 26.6 16.2 0.0 chr3 43900728 43900881 (154121549) + MamGypLTR1a LTR/Gypsy 1 179 (605) 770218 311 26.8 19.8 2.1 chr3 43947632 43947866 (154074564) C LTR81AB LTR/Gypsy (41) 1112 836 770306 601 27.1 9.2 2.5 chr3 43948949 43949186 (154073244) C LTR81AB LTR/Gypsy (24) 254 1 770306 350 29.1 17.3 5.7 chr3 44227888 44228291 (153794139) + MamGypLTR1c LTR/Gypsy 56 506 (297) 770647 301 21.9 25.2 0.9 chr3 44228365 44228479 (153793951) + MamGypLTR1c LTR/Gypsy 660 802 (1) 770647 401 27.4 8.5 2.6 chr3 44579280 44579484 (153442946) + LTR81B LTR/Gypsy 9 219 (1131) 771224 232 23.6 5.5 0.0 chr3 45213406 45213460 (152808970) + MamGypLTR1d LTR/Gypsy 696 753 (60) 772279 785 31.2 7.1 7.3 chr3 45248871 45249475 (152772955) + LTR81A LTR/Gypsy 106 709 (641) 772352 334 22.8 10.6 6.6 chr3 45250087 45250303 (152772127) + LTR81A LTR/Gypsy 849 1004 (64) 772352 227 28.2 14.2 2.5 chr3 45256821 45256940 (152765490) + LTR81C LTR/Gypsy 646 779 (374) 772367 531 29.4 9.9 9.2 chr3 45535792 45536083 (152486347) C MamGypLTR3 LTR/Gypsy (0) 839 546 772821 299 26.7 18.0 9.0 chr3 46173805 46174104 (151848326) + MamGypLTR3 LTR/Gypsy 482 808 (31) 773807 487 26.0 13.9 9.8 chr3 46303472 46303859 (151718571) + LTR81B LTR/Gypsy 987 1390 (3) 773974 345 24.2 5.0 1.0 chr3 47253762 47253861 (150768569) C MamGypLTR2c LTR/Gypsy (562) 506 403 775431 392 31.9 3.8 3.0 chr3 51808885 51809146 (146213284) C LTR81C LTR/Gypsy (455) 698 435 783349 258 38.5 1.8 4.7 chr3 53978807 53978975 (144043455) C MamGypLTR2b LTR/Gypsy (758) 164 1 786540 227 29.7 3.9 1.9 chr3 53999608 53999710 (144022720) C MamGypLTR3 LTR/Gypsy (79) 760 656 786573 557 27.3 5.6 1.8 chr3 54305590 54305822 (143716608) C MamGypLTR1c LTR/Gypsy (15) 788 560 787087 256 26.1 4.1 5.2 chr3 54352488 54352584 (143669846) C MamGypLTR1a LTR/Gypsy (0) 784 689 787139 282 25.5 4.5 3.6 chr3 54353232 54353341 (143669089) C MamGypLTR1a LTR/Gypsy (671) 113 3 787139 325 28.1 1.4 7.2 chr3 55439589 55439726 (142582704) + MamGypLTR3 LTR/Gypsy 468 597 (242) 788524 292 24.8 6.3 1.8 chr3 55447714 55447824 (142574606) + MamGypLTR1d LTR/Gypsy 1 116 (697) 788539 265 31.9 9.2 3.6 chr3 55943681 55943875 (142078555) + MamGypLTR1b LTR/Gypsy 515 720 (62) 789332 347 31.1 13.6 10.8 chr3 56289380 56289844 (141732586) C MamGypLTR2c LTR/Gypsy (494) 574 97 789845 259 25.5 9.6 9.6 chr3 58178184 58178361 (139844069) + MamGypLTR3 LTR/Gypsy 660 837 (2) 793444 532 33.6 6.6 5.1 chr3 58457670 58458001 (139564429) C MamGypLTR1d LTR/Gypsy (0) 813 477 794002 251 29.6 2.0 2.0 chr3 58458069 58458168 (139564262) C MamGypLTR1d LTR/Gypsy (713) 100 1 794002 381 27.7 4.5 1.5 chr3 58665167 58665298 (139357132) C MamGypLTR1a LTR/Gypsy (3) 781 646 794401 364 20.5 1.2 2.5 chr3 58703896 58703975 (139318455) C LTR81C LTR/Gypsy (0) 1153 1075 794462 580 33.1 7.8 0.0 chr3 59409317 59409585 (138612845) C MamGypLTR3 LTR/Gypsy (0) 839 550 795387 406 33.2 11.4 3.2 chr3 61178927 61179234 (136843196) + MamGypLTR1b LTR/Gypsy 297 629 (153) 797949 300 36.3 4.0 2.2 chr3 61290294 61290521 (136731909) + MamGypLTR1a LTR/Gypsy 132 363 (421) 798112 278 30.2 6.4 0.7 chr3 61355917 61356056 (136666374) + MamGypLTR1a LTR/Gypsy 597 744 (40) 798231 287 18.9 6.0 0.0 chr3 61435891 61435974 (136586456) + LTR81A LTR/Gypsy 1255 1319 (31) 798377 799 31.6 10.2 7.7 chr3 62947669 62948432 (135073998) + MamGypLTR1a LTR/Gypsy 1 783 (1) 800864 286 18.5 3.1 0.0 chr3 63180904 63180968 (134841462) C MamGypLTR1a LTR/Gypsy (10) 774 708 801280 296 30.0 8.3 6.5 chr3 63310956 63311279 (134711151) C MamGypLTR2b LTR/Gypsy (0) 922 593 801490 531 25.9 2.5 5.6 chr3 63394879 63395074 (134627356) C LTR81A LTR/Gypsy (1127) 223 34 801635 354 26.3 1.6 2.5 chr3 63671030 63671150 (134351280) C MamGypLTR1b LTR/Gypsy (22) 760 641 802136 229 22.4 3.5 0.0 chr3 64022617 64022674 (133999756) C MamGypLTR1b LTR/Gypsy (80) 704 645 802726 298 27.9 10.2 4.8 chr3 64022846 64022992 (133999438) C MamGypLTR1b LTR/Gypsy (515) 267 113 802726 361 23.3 17.0 2.7 chr3 64051981 64052184 (133970246) + MamGypLTR1c LTR/Gypsy 5 236 (577) 802773 263 19.4 7.3 10.1 chr3 64052782 64052826 (133969604) + MamGypLTR1c LTR/Gypsy 695 735 (68) 802773 263 19.4 7.3 10.1 chr3 64053037 64053099 (133969331) + MamGypLTR1c LTR/Gypsy 736 800 (3) 802773 312 22.5 0.0 1.4 chr3 64589024 64589095 (133433335) + MamGypLTR1a LTR/Gypsy 94 164 (620) 803660 248 26.4 5.5 2.8 chr3 64854779 64854887 (133167543) C MamGypLTR1b LTR/Gypsy (25) 757 646 804106 381 18.3 6.6 7.2 chr3 64854980 64855097 (133167333) C MamGypLTR1b LTR/Gypsy (603) 179 70 804106 357 24.3 11.7 1.2 chr3 65234159 65234329 (132788101) C MamGypLTR1a LTR/Gypsy (10) 774 586 804718 276 30.0 7.5 8.0 chr3 65234613 65234851 (132787579) C MamGypLTR1a LTR/Gypsy (533) 251 14 804718 478 25.1 10.3 1.5 chr3 65705557 65705735 (132316695) C LTR81A LTR/Gypsy (31) 1122 957 805453 286 30.8 12.5 0.0 chr3 65705894 65706013 (132316417) C LTR81B LTR/Gypsy (270) 1123 989 805455 273 18.5 2.0 9.8 chr3 65706925 65707026 (132315404) C LTR81A LTR/Gypsy (917) 433 340 805453 823 22.9 2.9 1.6 chr3 65707145 65707396 (132315034) C LTR81A LTR/Gypsy (1032) 318 3 805453 470 26.5 5.4 3.5 chr3 66623943 66624145 (131398285) + MamGypLTR3 LTR/Gypsy 545 751 (88) 806897 282 26.7 7.9 5.4 chr3 66710557 66710738 (131311692) + MamGypLTR1d LTR/Gypsy 3 186 (627) 807079 297 29.7 8.0 5.6 chr3 66711510 66711771 (131310659) + MamGypLTR1d LTR/Gypsy 8 439 (364) 807083 415 32.1 4.5 2.5 chr3 66712747 66712947 (131309483) + MamGypLTR1d LTR/Gypsy 598 802 (11) 807083 419 31.2 13.9 1.1 chr3 66850031 66850240 (131172190) C MamGypLTR1c LTR/Gypsy (254) 528 296 807332 504 23.1 6.8 2.7 chr3 66850275 66850421 (131172009) C MamGypLTR1c LTR/Gypsy (639) 164 12 807332 312 35.3 0.0 0.0 chr3 67167680 67167764 (130854666) C MamGypLTR1b LTR/Gypsy (250) 532 448 807804 716 31.6 13.2 3.6 chr3 67180914 67181563 (130840867) + MamGypLTR1a LTR/Gypsy 2 726 (58) 807819 264 29.6 1.0 2.0 chr3 67228000 67228099 (130794331) C LTR81C LTR/Gypsy (399) 754 656 807872 233 28.4 4.4 3.3 chr3 67290545 67290635 (130731795) + MamGypLTR1b LTR/Gypsy 482 573 (209) 807971 248 25.5 10.6 1.9 chr3 67323040 67323143 (130699287) C MamGypLTR1b LTR/Gypsy (23) 759 647 808013 334 30.1 8.5 2.3 chr3 67347213 67347389 (130675041) C MamGypLTR1a LTR/Gypsy (593) 191 4 808054 328 27.2 5.5 1.6 chr3 67777847 67777973 (130244457) + LTR81A LTR/Gypsy 190 321 (1029) 808753 246 30.4 2.1 12.0 chr3 67778575 67778716 (130243714) + LTR81A LTR/Gypsy 661 788 (562) 808753 272 22.2 9.8 2.2 chr3 68142076 68142167 (129880263) C LTR81A LTR/Gypsy (127) 1026 928 809323 614 30.1 2.4 4.3 chr3 68142969 68143353 (129879077) C LTR81A LTR/Gypsy (966) 384 6 809323 276 26.3 9.0 0.8 chr3 68203974 68204107 (129818323) C MamGypLTR1b LTR/Gypsy (637) 145 1 809426 311 30.9 9.1 7.7 chr3 68269544 68269907 (129752523) C LTR81B LTR/Gypsy (3) 1390 1022 809513 316 28.1 5.8 10.6 chr3 68270554 68270828 (129751602) C LTR81B LTR/Gypsy (1116) 277 16 809513 225 26.8 1.8 0.0 chr3 68652064 68652119 (129370311) + MamGypLTR1c LTR/Gypsy 499 555 (248) 810122 255 24.0 6.6 1.3 chr3 68992964 68993039 (129029391) + LTR81A LTR/Gypsy 135 214 (1136) 810569 238 34.1 9.9 1.1 chr3 70038779 70038959 (127983471) + MamGypLTR2c LTR/Gypsy 163 359 (709) 812451 226 25.6 6.5 2.2 chr3 70368711 70368802 (127653628) + LTR81AB LTR/Gypsy 124 219 (59) 812940 632 37.8 5.7 3.0 chr3 70368835 70369205 (127653225) + MamGypLTR2c LTR/Gypsy 88 468 (600) 812941 419 23.8 3.8 0.0 chr3 70369532 70369636 (127652794) + MamGypLTR2c LTR/Gypsy 903 1011 (57) 812942 336 33.3 10.8 2.9 chr3 70467380 70467694 (127554736) C MamGypLTR2b LTR/Gypsy (71) 851 512 813067 263 35.9 5.3 5.3 chr3 70467818 70467967 (127554463) C MamGypLTR2b LTR/Gypsy (771) 151 2 813067 282 29.6 8.6 2.5 chr3 70991930 70992092 (127030338) C MamGypLTR2c LTR/Gypsy (812) 256 84 813779 229 21.2 5.8 7.0 chr3 71753239 71753324 (126269106) + MamGypLTR2c LTR/Gypsy 4 88 (980) 814854 345 31.3 6.0 7.8 chr3 71753474 71753754 (126268676) + MamGypLTR2c LTR/Gypsy 318 593 (475) 814855 262 29.6 0.0 0.0 chr3 71753928 71753998 (126268432) + MamGypLTR2c LTR/Gypsy 890 960 (108) 814855 754 32.8 13.7 5.5 chr3 71797117 71797304 (126225126) + MamGypLTR1d LTR/Gypsy 10 232 (581) 814934 754 32.8 13.7 5.5 chr3 71797545 71798098 (126224332) + MamGypLTR1d LTR/Gypsy 233 813 (0) 814934 343 27.1 3.8 1.5 chr3 71997023 71997153 (126025277) + MamGypLTR1a LTR/Gypsy 634 767 (17) 815311 613 26.0 3.1 5.7 chr3 72146647 72146874 (125875556) + LTR81A LTR/Gypsy 1 222 (1128) 815629 647 29.1 15.3 6.7 chr3 72508322 72508856 (125513574) + MamGypLTR1c LTR/Gypsy 31 611 (192) 816326 831 25.5 2.3 2.7 chr3 72540229 72540504 (125481926) + LTR81AB LTR/Gypsy 5 272 (1121) 816398 666 34.2 6.0 1.1 chr3 72541172 72541537 (125480893) + LTR81AB LTR/Gypsy 301 684 (505) 816398 251 24.6 0.0 10.4 chr3 72542169 72542185 (125480245) + LTR81A LTR/Gypsy 1280 1289 (61) 816402 251 24.6 0.0 10.4 chr3 72542497 72542555 (125479875) + LTR81A LTR/Gypsy 1290 1348 (2) 816402 354 29.4 3.5 6.4 chr3 72570643 72570813 (125451617) C MamGypLTR2c LTR/Gypsy (0) 1068 903 816470 254 31.4 9.1 4.6 chr3 72572002 72572198 (125450232) C LTR81C LTR/Gypsy (946) 207 2 816473 405 19.8 1.1 1.1 chr3 72915965 72916056 (125106374) C MamGypLTR2b LTR/Gypsy (0) 922 831 817205 304 33.0 5.5 11.3 chr3 73222795 73222858 (124799572) C MamGypLTR3 LTR/Gypsy (110) 729 676 817870 304 33.0 5.5 11.3 chr3 73223343 73223550 (124798880) C MamGypLTR3 LTR/Gypsy (164) 675 477 817870 639 31.2 8.9 4.2 chr3 73256051 73256475 (124765955) C MamGypLTR1a LTR/Gypsy (219) 565 121 817928 325 28.4 13.3 2.3 chr3 73363325 73363580 (124658850) C LTR81C LTR/Gypsy (130) 1023 740 818116 262 33.1 4.9 7.0 chr3 73948596 73948780 (124073650) C MamGypLTR2b LTR/Gypsy (186) 736 556 819000 515 35.7 0.0 4.4 chr3 74051067 74051271 (123971159) + MamGypLTR2b LTR/Gypsy 121 316 (606) 819165 254 30.3 5.1 0.3 chr3 74051520 74051641 (123970789) + MamGypLTR2b LTR/Gypsy 680 893 (29) 819165 275 25.4 3.3 17.1 chr3 74084195 74084346 (123938084) + MamGypLTR2c LTR/Gypsy 209 339 (729) 819217 320 27.4 1.8 4.5 chr3 74340837 74340947 (123681483) C MamGypLTR1a LTR/Gypsy (57) 727 620 819599 292 28.3 5.7 2.4 chr3 74341188 74341310 (123681120) C MamGypLTR1a LTR/Gypsy (558) 224 98 819599 244 33.6 0.0 12.2 chr3 74624969 74625124 (123397306) C MamGypLTR1b LTR/Gypsy (248) 534 398 819993 737 28.8 10.2 8.2 chr3 74839437 74839849 (123182581) C LTR81A LTR/Gypsy (0) 1350 930 820344 331 33.7 3.5 2.9 chr3 75277854 75277950 (122744480) + MamGypLTR1b LTR/Gypsy 1 102 (680) 820894 331 33.7 3.5 2.9 chr3 75278427 75278499 (122743931) + MamGypLTR1b LTR/Gypsy 103 172 (610) 820894 461 27.2 5.8 2.9 chr3 75588158 75588331 (122434099) C MamGypLTR1b LTR/Gypsy (3) 779 601 821370 343 37.5 4.6 6.4 chr3 75866007 75866445 (122155985) C MamGypLTR1c LTR/Gypsy (241) 562 132 821724 260 29.3 1.0 3.9 chr3 76250020 76250122 (121772308) + MamGypLTR3 LTR/Gypsy 724 823 (16) 822206 252 28.2 2.6 9.7 chr3 76536054 76536117 (121486313) C MamGypLTR1d LTR/Gypsy (596) 217 153 822580 252 28.2 2.6 9.7 chr3 76536430 76536478 (121485952) C MamGypLTR1d LTR/Gypsy (661) 152 112 822580 403 34.1 2.7 2.2 chr3 77769774 77769956 (120252474) C MamGyp-int LTR/Gypsy (591) 4471 4288 824218 226 24.2 5.5 0.2 chr3 78072902 78072984 (119949446) C LTR81AB LTR/Gypsy (18) 1332 1258 824580 309 30.1 13.2 2.8 chr3 78073013 78073224 (119949206) C LTR81AB LTR/Gypsy (132) 1021 788 824580 463 25.3 10.8 3.0 chr3 78074264 78074430 (119948000) C LTR81AB LTR/Gypsy (73) 205 26 824580 226 29.8 0.0 1.7 chr3 78077575 78077632 (119944798) C MamGypLTR1c LTR/Gypsy (393) 410 354 824591 396 28.7 3.6 2.9 chr3 78077795 78077934 (119944496) C MamGypLTR1c LTR/Gypsy (659) 144 4 824591 375 40.8 0.0 3.5 chr3 78108065 78108267 (119914163) C MamGypLTR2b LTR/Gypsy (565) 357 162 824626 453 33.4 12.1 6.7 chr3 78229562 78229907 (119792523) C MamGypLTR1a LTR/Gypsy (107) 677 313 824789 343 31.5 9.2 7.4 chr3 78560953 78561332 (119461098) C MamGypLTR1d LTR/Gypsy (397) 416 30 825243 280 29.8 3.6 0.0 chr3 78644929 78645012 (119377418) + MamGypLTR2b LTR/Gypsy 778 864 (58) 825375 284 26.9 6.6 6.0 chr3 79501902 79502067 (118520363) + MamGypLTR1b LTR/Gypsy 22 188 (594) 826520 242 31.4 5.1 3.2 chr3 80053722 80053879 (117968551) + MamGypLTR2c LTR/Gypsy 4 164 (904) 827219 271 31.2 10.9 5.2 chr3 80282979 80283208 (117739222) + MamGypLTR3 LTR/Gypsy 543 785 (54) 827587 392 25.2 0.0 11.2 chr3 81474276 81474409 (116548021) C MamGypLTR2b LTR/Gypsy (0) 922 804 829183 353 28.9 6.1 4.4 chr3 81946710 81946890 (116075540) + MamGypLTR1c LTR/Gypsy 617 800 (3) 829859 486 25.4 12.6 4.4 chr3 81985895 81986100 (116036330) + MamGypLTR2c LTR/Gypsy 3 225 (843) 829907 653 29.6 21.3 7.6 chr3 81986096 81986730 (116035700) + MamGypLTR2c LTR/Gypsy 347 1068 (0) 829907 263 27.4 7.0 5.0 chr3 82137157 82137256 (115885174) + LTR81C LTR/Gypsy 583 684 (469) 830076 298 27.9 0.0 1.2 chr3 82179408 82179487 (115842943) + MamGypLTR1a LTR/Gypsy 126 204 (580) 830107 265 17.1 0.0 0.0 chr3 82181806 82181846 (115840584) C MamGypLTR1b LTR/Gypsy (364) 418 378 830111 324 35.3 6.8 0.8 chr3 82186312 82186428 (115836002) C MamGypLTR1a LTR/Gypsy (329) 455 332 830119 477 32.1 2.9 2.5 chr3 82227180 82227422 (115795008) + MamGypLTR1d LTR/Gypsy 566 809 (4) 830177 416 31.7 5.5 1.5 chr3 82437479 82437680 (115584750) + MamGypLTR2c LTR/Gypsy 823 1032 (36) 830440 235 14.3 6.1 0.0 chr3 83017089 83017137 (115005293) C MamGypLTR2b LTR/Gypsy (157) 765 714 831229 236 25.1 2.7 5.8 chr3 83064618 83064739 (114957691) C MamGypLTR1d LTR/Gypsy (11) 802 655 831289 954 40.1 6.6 0.2 chr3 83070115 83070686 (114951744) C MamGyp-int LTR/Gypsy (487) 4575 3967 831297 234 28.8 8.2 10.3 chr3 83462034 83462265 (114560165) C MamGypLTR3 LTR/Gypsy (37) 802 576 831798 238 37.1 2.3 3.1 chr3 83651225 83651352 (114371078) C MamGypLTR2b LTR/Gypsy (630) 292 166 832043 254 40.5 3.4 2.4 chr3 83815189 83815486 (114206944) + MamGyp-int LTR/Gypsy 621 921 (4141) 832239 313 33.0 6.8 0.5 chr3 84606212 84606403 (113416027) + MamGypLTR1a LTR/Gypsy 1 204 (580) 833246 250 38.0 7.0 0.0 chr3 84607140 84607268 (113415162) + MamGypLTR1a LTR/Gypsy 559 696 (88) 833246 250 31.9 9.3 7.1 chr3 87051281 87051506 (110970924) C MamGypLTR2b LTR/Gypsy (588) 334 104 836453 348 35.1 5.8 2.9 chr3 87085287 87085494 (110936936) C MamGypLTR1d LTR/Gypsy (2) 811 598 836497 378 28.6 6.2 6.8 chr3 87480185 87480360 (110542070) C LTR81AB LTR/Gypsy (97) 181 7 837010 236 34.6 15.5 1.0 chr3 87596264 87596470 (110425960) + MamGypLTR1d LTR/Gypsy 3 239 (574) 837146 488 36.0 11.8 2.7 chr3 87596545 87596958 (110425472) + MamGypLTR1d LTR/Gypsy 349 800 (13) 837146 332 27.2 10.3 1.6 chr3 88053503 88053696 (109968734) + MamGypLTR2b LTR/Gypsy 689 899 (23) 837707 1186 30.4 14.6 3.6 chr3 88330352 88331038 (109691392) C MamGypLTR1c LTR/Gypsy (8) 795 18 838127 642 33.3 8.8 8.8 chr3 88373701 88374257 (109648173) + MamGypLTR1c LTR/Gypsy 1 557 (246) 838180 286 30.5 1.0 3.1 chr3 88497618 88497715 (109524715) + LTR81B LTR/Gypsy 266 361 (1032) 838333 317 22.8 25.1 1.1 chr3 88817158 88817348 (109205082) + MamGypLTR2b LTR/Gypsy 676 912 (10) 838737 434 33.4 15.3 3.5 chr3 88899787 88900158 (109122272) + MamGypLTR1a LTR/Gypsy 72 487 (297) 838828 240 20.6 3.2 0.0 chr3 89127262 89127324 (108895106) C LTR81B LTR/Gypsy (1219) 174 110 839093 262 29.7 15.2 0.9 chr3 89305766 89305877 (108716553) C LTR81A LTR/Gypsy (1043) 307 180 839338 290 36.6 0.9 0.0 chr3 89607236 89607347 (108415083) C MamGyp-int LTR/Gypsy (4885) 177 65 839748 508 27.3 4.8 5.4 chr3 89742581 89742766 (108279664) C MamGypLTR1c LTR/Gypsy (609) 194 10 839903 263 35.2 1.1 2.1 chr3 89841226 89841318 (108181112) C MamGypLTR1b LTR/Gypsy (332) 450 359 840018 445 31.1 12.5 9.4 chr3 93965507 93965857 (104056573) C MamGypLTR3 LTR/Gypsy (96) 743 382 841286 372 29.7 9.1 2.1 chr3 94055425 94055610 (103966820) + MamGypLTR1d LTR/Gypsy 615 813 (0) 841414 229 23.1 19.1 1.8 chr3 94059888 94059997 (103962433) + LTR81 LTR/Gypsy 924 1052 (137) 841420 417 29.3 8.1 2.2 chr3 94071080 94071264 (103951166) + MamGypLTR2c LTR/Gypsy 73 268 (800) 841437 473 28.4 3.0 0.0 chr3 94263705 94263838 (103758592) C MamGypLTR1a LTR/Gypsy (581) 203 66 841672 226 26.8 1.8 0.0 chr3 95198585 95198640 (102823790) + LTR81B LTR/Gypsy 264 320 (1073) 842864 441 31.5 11.5 3.3 chr3 95319671 95319975 (102702455) + MamGypLTR2b LTR/Gypsy 560 889 (33) 843036 418 24.4 10.2 4.0 chr3 95740570 95740785 (102281645) C MamGypLTR2b LTR/Gypsy (14) 1054 723 843582 242 18.1 12.0 4.0 chr3 96505351 96505425 (101517005) + MamGypLTR1d LTR/Gypsy 730 810 (3) 844480 812 31.9 16.0 1.3 chr3 96748916 96749445 (101272985) C MamGypLTR1a LTR/Gypsy (2) 782 175 844792 229 37.6 5.6 2.1 chr3 97440177 97440320 (100582110) C MamGypLTR3 LTR/Gypsy (143) 696 548 845659 309 25.9 7.1 5.4 chr3 97776094 97776277 (100246153) + LTR81B LTR/Gypsy 2 188 (1205) 846079 478 29.6 8.1 1.1 chr3 98715016 98715189 (99307241) C MamGypLTR1b LTR/Gypsy (3) 779 594 847229 433 31.2 9.4 2.3 chr3 98726987 98727242 (99295188) C MamGypLTR1b LTR/Gypsy (508) 274 1 847240 456 32.5 7.3 6.7 chr3 99235738 99236333 (98786097) C LTR81A LTR/Gypsy (583) 810 157 847837 225 23.8 1.5 4.5 chr3 99484073 99484138 (98538292) C LTR81B LTR/Gypsy (94) 1299 1236 848166 274 26.4 0.0 0.0 chr3 100897081 100897152 (97125278) + MamGypLTR1d LTR/Gypsy 108 179 (624) 850139 314 30.0 10.9 2.3 chr3 100897267 100897440 (97124990) + MamGypLTR1d LTR/Gypsy 349 537 (276) 850139 685 20.7 10.9 0.6 chr3 101766393 101766567 (96255863) C MamGypLTR2b LTR/Gypsy (7) 915 723 851437 229 26.3 10.2 3.1 chr3 101915844 101915941 (96106489) + MamGypLTR1a LTR/Gypsy 666 770 (14) 851671 232 31.9 11.1 0.8 chr3 102022738 102022854 (95999576) + MamGypLTR3 LTR/Gypsy 681 809 (30) 851799 693 29.1 8.5 5.8 chr3 102033917 102034244 (95988186) C MamGypLTR3 LTR/Gypsy (10) 829 493 851808 769 31.9 14.7 4.6 chr3 102335908 102336363 (95686067) C MamGypLTR1c LTR/Gypsy (8) 795 294 852217 233 16.7 12.6 0.0 chr3 102336393 102336472 (95685958) C MamGypLTR1c LTR/Gypsy (630) 183 96 852217 392 31.0 7.5 6.4 chr3 102491104 102491344 (95531086) C MamGypLTR1a LTR/Gypsy (538) 246 13 852443 441 28.0 2.5 7.0 chr3 103704142 103704341 (94318089) + LTR81AB LTR/Gypsy 4 194 (84) 854000 305 35.6 4.4 1.5 chr3 103735962 103736098 (94286332) + LTR81A LTR/Gypsy 34 174 (979) 854032 376 36.9 6.7 1.8 chr3 103736410 103736768 (94285662) + LTR81A LTR/Gypsy 616 1015 (138) 854032 408 32.3 3.3 7.5 chr3 103857019 103857346 (94165084) C MamGypLTR1d LTR/Gypsy (0) 813 502 854163 415 30.2 2.8 3.9 chr3 103857666 103857844 (94164586) C MamGypLTR1d LTR/Gypsy (618) 195 19 854163 249 22.8 16.8 4.2 chr3 104454658 104454776 (93567654) C MamGypLTR1d LTR/Gypsy (679) 134 1 854866 291 30.3 5.1 2.6 chr3 104639748 104639903 (93382527) C MamGypLTR2b LTR/Gypsy (83) 839 680 855115 334 31.3 3.0 3.0 chr3 104862651 104862785 (93159645) + MamGypLTR1d LTR/Gypsy 86 220 (593) 855419 550 30.0 1.8 1.8 chr3 104926813 104926975 (93095455) C MamGypLTR1c LTR/Gypsy (586) 217 55 855514 451 30.8 13.3 7.3 chr3 105695599 105695899 (92326531) C MamGypLTR1d LTR/Gypsy (1) 812 494 856517 311 27.0 19.2 5.3 chr3 105696175 105696440 (92325990) C MamGypLTR1d LTR/Gypsy (507) 306 4 856517 262 21.9 5.4 1.4 chr3 105697741 105697814 (92324616) C MamGypLTR1c LTR/Gypsy (673) 130 54 856523 256 25.1 13.5 8.7 chr3 105984779 105985044 (92037386) C LTR81 LTR/Gypsy (33) 1156 878 856879 315 29.3 5.0 3.9 chr3 105986547 105986727 (92035703) + MamGypLTR1a LTR/Gypsy 1 183 (601) 856884 225 27.0 1.5 4.5 chr3 105986852 105986917 (92035513) + MamGypLTR1a LTR/Gypsy 343 406 (378) 856884 330 33.1 0.0 3.4 chr3 105987626 105987772 (92034658) + MamGypLTR1a LTR/Gypsy 631 772 (12) 856884 557 33.2 5.8 6.3 chr3 106009191 106009621 (92012809) C MamGypLTR1a LTR/Gypsy (11) 773 345 856909 308 32.4 7.7 6.6 chr3 106208913 106209094 (91813336) C MamGypLTR2c LTR/Gypsy (540) 528 345 857187 263 24.1 14.7 1.4 chr3 106706307 106706449 (91315981) C LTR81B LTR/Gypsy (44) 1306 1145 857808 1104 31.8 14.7 6.1 chr3 106706488 106707522 (91314908) C LTR81B LTR/Gypsy (202) 1191 68 857808 301 36.9 12.8 0.4 chr3 106777390 106777615 (91244815) + MamGypLTR2b LTR/Gypsy 338 591 (331) 857892 265 29.8 2.9 10.9 chr3 106818678 106818943 (91203487) + LTR81C LTR/Gypsy 835 1031 (122) 857950 421 29.1 7.9 6.0 chr3 106870225 106870539 (91151891) + LTR81B LTR/Gypsy 1025 1388 (5) 858009 447 31.4 3.6 10.5 chr3 107115948 107116338 (90906092) C LTR81 LTR/Gypsy (12) 1177 814 858344 398 24.6 4.6 12.8 chr3 107117882 107118100 (90904330) C MamGypLTR1c LTR/Gypsy (601) 202 2 858346 286 31.0 2.3 13.3 chr3 107169435 107169698 (90852732) + MamGypLTR3 LTR/Gypsy 476 710 (129) 858435 239 23.9 1.5 1.5 chr3 107169710 107169777 (90852653) + MamGypLTR3 LTR/Gypsy 697 764 (75) 858435 587 30.9 9.6 1.1 chr3 107219385 107219665 (90802765) + MamGypLTR1a LTR/Gypsy 1 305 (479) 858526 250 31.2 6.4 6.4 chr3 107558731 107558901 (90463529) C MamGypLTR3 LTR/Gypsy (509) 330 160 858977 401 29.1 11.0 11.0 chr3 107568228 107568644 (90453786) + MamGypLTR1c LTR/Gypsy 377 793 (10) 858992 256 32.8 7.5 0.0 chr3 108443940 108444073 (89578357) C MamGypLTR1a LTR/Gypsy (623) 161 18 860219 407 27.9 0.1 3.5 chr3 108452694 108452837 (89569593) C LTR81A LTR/Gypsy (1121) 272 139 860227 339 24.6 6.7 0.8 chr3 108594418 108594536 (89427894) + MamGypLTR1b LTR/Gypsy 657 782 (0) 860437 353 22.9 3.7 1.9 chr3 108661879 108661985 (89360445) + MamGypLTR2c LTR/Gypsy 38 146 (922) 860526 229 22.1 14.9 1.1 chr3 108662496 108662582 (89359848) + MamGypLTR1c LTR/Gypsy 705 803 (0) 860527 372 35.5 5.9 1.5 chr3 108915667 108915869 (89106561) C MamGyp-int LTR/Gypsy (896) 4166 3955 860912 1642 32.8 4.0 2.3 chr3 108917963 108918705 (89103725) C MamGyp-int LTR/Gypsy (2208) 2854 2099 860912 232 31.4 4.7 0.9 chr3 109361828 109361933 (88660497) + MamGypLTR1c LTR/Gypsy 471 580 (223) 861712 396 26.4 13.4 4.9 chr3 109361937 109362183 (88660247) + MamGypLTR1c LTR/Gypsy 536 803 (0) 861712 271 34.0 8.7 3.9 chr3 109394726 109394933 (88627497) C MamGypLTR1c LTR/Gypsy (238) 565 348 861750 327 28.1 12.1 3.6 chr3 109526815 109526980 (88495450) + MamGypLTR1c LTR/Gypsy 61 240 (544) 861918 516 30.1 11.5 7.4 chr3 109527111 109527503 (88494927) + MamGypLTR1c LTR/Gypsy 322 756 (47) 861918 516 32.3 7.3 5.5 chr3 109527885 109527909 (88494521) + MamGypLTR1c LTR/Gypsy 757 778 (25) 861918 270 27.5 10.6 2.8 chr3 110181741 110181882 (87840548) + MamGypLTR1a LTR/Gypsy 5 157 (625) 862806 283 36.9 3.6 3.6 chr3 110181918 110182111 (87840319) + MamGypLTR1a LTR/Gypsy 241 434 (350) 862806 414 24.8 2.2 4.0 chr3 110457724 110457870 (87564560) C MamGypLTR2b LTR/Gypsy (2) 920 653 863157 248 39.3 6.3 2.4 chr3 110458195 110458400 (87564030) C MamGypLTR2b LTR/Gypsy (592) 330 117 863158 235 29.7 0.0 0.0 chr3 110573919 110573992 (87448438) + LTR81AB LTR/Gypsy 48 121 (157) 863303 418 32.6 6.8 1.4 chr3 110601223 110601368 (87421062) C MamGypLTR1a LTR/Gypsy (273) 511 358 863336 450 31.3 3.9 5.0 chr3 110927991 110928304 (87094126) + MamGypLTR1a LTR/Gypsy 456 784 (0) 863745 284 32.2 2.1 1.1 chr3 111514191 111514284 (86508146) C MamGypLTR1b LTR/Gypsy (238) 544 450 864396 495 33.1 6.7 4.0 chr3 111537205 111537503 (86484927) C MamGypLTR3 LTR/Gypsy (35) 804 498 864442 260 25.6 6.6 1.1 chr3 111542611 111542701 (86479729) C LTR81B LTR/Gypsy (22) 1371 1276 864448 369 30.7 8.4 2.4 chr3 111735998 111736164 (86286266) + LTR81C LTR/Gypsy 1 177 (976) 864724 347 29.6 13.9 0.0 chr3 112054680 112054787 (85967643) C MamGypLTR3 LTR/Gypsy (438) 401 279 865125 237 30.4 6.1 1.2 chr3 112092415 112092557 (85929873) C MamGypLTR1d LTR/Gypsy (660) 153 1 865186 261 5.9 1.7 13.6 chr3 112440629 112440687 (85581743) C MamGypLTR2b LTR/Gypsy (104) 818 767 865644 233 24.4 4.7 3.5 chr3 112511927 112512011 (85510419) C MamGypLTR1b LTR/Gypsy (0) 782 697 865750 433 30.7 17.2 3.3 chr3 112512646 112513127 (85509303) C MamGypLTR1b LTR/Gypsy (220) 562 14 865750 268 30.9 3.8 4.4 chr3 112528200 112528358 (85494072) C MamGypLTR1d LTR/Gypsy (603) 210 53 865774 403 28.6 11.5 10.1 chr3 112790341 112790506 (85231924) + LTR81B LTR/Gypsy 172 354 (1039) 866085 403 28.6 11.5 10.1 chr3 112790631 112790751 (85231679) + LTR81B LTR/Gypsy 355 463 (930) 866085 363 33.3 8.4 0.5 chr3 113071939 113072140 (84950290) + MamGypLTR1a LTR/Gypsy 308 525 (259) 866471 392 27.1 0.8 5.4 chr3 113072159 113072287 (84950143) + MamGypLTR1a LTR/Gypsy 653 775 (9) 866471 319 13.4 2.9 1.5 chr3 113929922 113929989 (84092441) + MamGypLTR1b LTR/Gypsy 713 781 (1) 867845 634 28.9 6.8 6.1 chr3 113948596 113948875 (84073555) C MamGypLTR3 LTR/Gypsy (0) 839 558 867870 479 25.8 6.9 2.9 chr3 114886159 114886362 (83136068) C MamGypLTR1d LTR/Gypsy (11) 802 591 869042 262 25.3 2.5 1.2 chr3 115016442 115016521 (83005909) C MamGypLTR3 LTR/Gypsy (30) 809 729 869210 418 33.3 8.4 2.6 chr3 115016824 115016931 (83005499) C MamGypLTR3 LTR/Gypsy (603) 236 123 869210 418 33.3 8.4 2.6 chr3 115017357 115017438 (83004992) C MamGypLTR3 LTR/Gypsy (717) 122 35 869210 438 42.6 2.8 4.4 chr3 115217290 115217719 (82804711) + MamGyp-int LTR/Gypsy 611 1033 (4029) 869487 542 36.6 5.8 4.4 chr3 115217843 115218276 (82804154) + MamGyp-int LTR/Gypsy 1199 1638 (3424) 869487 1092 32.5 7.2 1.8 chr3 115218382 115218891 (82803539) + MamGyp-int LTR/Gypsy 1791 2328 (2734) 869487 327 28.8 1.3 7.6 chr3 116471716 116471873 (81550557) C MamGypLTR1c LTR/Gypsy (620) 183 36 871084 386 36.4 4.5 0.6 chr3 116830062 116830238 (81192192) + LTR81A LTR/Gypsy 19 202 (987) 871568 942 34.5 9.8 3.6 chr3 116830423 116831066 (81191364) + LTR81A LTR/Gypsy 660 1343 (7) 871568 529 33.5 7.4 8.2 chr3 117819117 117819526 (80202904) + MamGypLTR1b LTR/Gypsy 206 621 (161) 872875 392 29.6 10.6 3.8 chr3 117995641 117995992 (80026438) C MamGypLTR1d LTR/Gypsy (429) 374 1 873106 260 24.2 7.1 5.0 chr3 118319920 118320064 (79702366) C MamGypLTR2b LTR/Gypsy (30) 892 708 873492 256 26.4 21.7 3.3 chr3 118532492 118532671 (79489759) C MamGypLTR2c LTR/Gypsy (29) 1039 827 873818 762 28.7 20.1 4.0 chr3 118661543 118662173 (79360257) + MamGypLTR1a LTR/Gypsy 31 763 (21) 873984 772 31.3 8.0 9.4 chr3 118679642 118680216 (79342214) C LTR81A LTR/Gypsy (10) 1340 774 874012 444 25.9 2.7 2.7 chr3 118688439 118688585 (79333845) C MamGypLTR2b LTR/Gypsy (1) 921 775 874028 591 31.0 9.5 12.0 chr3 118738150 118738680 (79283750) C LTR81B LTR/Gypsy (37) 1356 881 874086 591 31.0 9.5 12.0 chr3 118739036 118739218 (79283212) C LTR81B LTR/Gypsy (513) 880 660 874086 265 27.1 2.6 7.7 chr3 118782219 118782311 (79240119) + LTR81AB LTR/Gypsy 14 109 (169) 874127 265 27.1 2.6 7.7 chr3 118782336 118782397 (79240033) + LTR81AB LTR/Gypsy 110 161 (117) 874127 321 22.5 3.5 5.6 chr3 120183430 120183554 (77838876) C MamGypLTR1d LTR/Gypsy (16) 797 695 876172 298 24.5 4.9 3.9 chr3 120184480 120184581 (77837849) C MamGypLTR2c LTR/Gypsy (965) 103 1 876174 394 29.1 5.9 7.5 chr3 121147424 121147609 (76874821) C LTR81A LTR/Gypsy (241) 1109 927 877326 630 31.6 8.1 3.1 chr3 121792662 121793266 (76229164) C MamGypLTR1b LTR/Gypsy (6) 776 118 878382 254 29.1 4.9 6.3 chr3 121890732 121890874 (76131556) + MamGypLTR1c LTR/Gypsy 6 146 (657) 878499 521 24.6 7.1 4.2 chr3 122006220 122006431 (76015999) C MamGypLTR2b LTR/Gypsy (1) 921 704 878676 607 25.1 5.4 0.0 chr3 122026983 122027149 (75995281) C MamGypLTR1c LTR/Gypsy (627) 176 1 878712 642 21.5 1.8 7.6 chr3 122041704 122041874 (75980556) + LTR81A LTR/Gypsy 27 187 (1163) 878734 664 29.2 13.8 9.5 chr3 122250561 122251002 (75771428) + MamGypLTR2c LTR/Gypsy 2 462 (606) 879074 433 28.7 4.6 3.6 chr3 122251265 122251459 (75770971) + MamGypLTR2c LTR/Gypsy 845 1041 (27) 879074 226 22.5 11.1 1.1 chr3 122325102 122325191 (75697239) C LTR81 LTR/Gypsy (0) 1189 1091 879214 800 20.5 1.9 1.9 chr3 122758974 122759187 (75263243) + MamGypLTR2b LTR/Gypsy 707 920 (2) 879881 262 20.2 17.0 1.0 chr3 122888785 122888884 (75133546) + LTR81B LTR/Gypsy 1129 1244 (149) 880091 359 22.8 1.0 1.0 chr3 123183541 123183642 (74838788) C MamGypLTR1d LTR/Gypsy (2) 811 710 880564 247 21.4 19.0 2.0 chr3 123184247 123184346 (74838084) C MamGypLTR1d LTR/Gypsy (454) 349 233 880564 378 30.8 15.4 4.7 chr3 123692686 123693087 (74329343) + LTR81B LTR/Gypsy 942 1386 (7) 881360 1609 29.0 20.3 5.9 chr3 123768657 123769858 (74252572) C LTR81A LTR/Gypsy (10) 1383 9 881469 289 29.6 7.2 2.7 chr3 124467622 124467732 (73554698) + MamGypLTR2b LTR/Gypsy 294 409 (513) 882497 592 30.6 4.8 1.2 chr3 124849915 124850165 (73172265) + MamGypLTR1c LTR/Gypsy 4 263 (540) 883145 533 31.0 8.9 7.1 chr3 124850680 124851172 (73171258) + MamGypLTR1c LTR/Gypsy 301 802 (1) 883145 434 28.2 7.2 2.2 chr3 125517654 125517834 (72504596) + MamGypLTR1b LTR/Gypsy 590 779 (3) 884363 254 29.8 6.5 6.0 chr3 125697149 125697316 (72325114) C LTR81B LTR/Gypsy (17) 1376 1208 884623 250 27.2 10.7 1.2 chr3 125697319 125697515 (72324915) C LTR81B LTR/Gypsy (232) 957 722 884623 278 31.9 4.5 8.9 chr3 126763324 126763510 (71258920) + LTR81A LTR/Gypsy 838 1195 (155) 886027 278 30.6 3.0 11.1 chr3 126763810 126763913 (71258517) + LTR81A LTR/Gypsy 1196 1301 (49) 886027 492 32.8 4.3 1.9 chr3 126769734 126769941 (71252489) C MamGyp-int LTR/Gypsy (522) 4540 4328 886038 226 15.5 8.5 1.7 chr3 126942710 126942768 (71079662) + MamGypLTR2b LTR/Gypsy 803 865 (57) 886299 324 27.0 12.1 8.8 chr3 126951026 126951240 (71071190) C MamGypLTR2c LTR/Gypsy (481) 587 366 886313 246 21.6 0.0 1.9 chr3 126989897 126989948 (71032482) + MamGypLTR2c LTR/Gypsy 55 105 (963) 886361 349 23.6 16.3 1.0 chr3 127035996 127036188 (70986242) + MamGypLTR2b LTR/Gypsy 675 1038 (30) 886427 288 27.0 13.9 1.0 chr3 127206820 127206920 (70815510) + LTR81B LTR/Gypsy 1280 1393 (0) 886681 438 35.0 4.7 3.3 chr3 127288616 127288784 (70733646) C MamGypLTR1c LTR/Gypsy (60) 743 576 886824 438 33.5 5.7 5.0 chr3 127289187 127289366 (70733064) C MamGypLTR1c LTR/Gypsy (228) 575 372 886824 289 28.3 6.5 5.5 chr3 127629901 127630117 (70392313) C MamGypLTR1c LTR/Gypsy (271) 532 314 887427 382 27.6 13.4 3.9 chr3 127690065 127690241 (70332189) + MamGypLTR1b LTR/Gypsy 423 619 (165) 887501 274 31.9 12.7 3.7 chr3 127690706 127690894 (70331536) C LTR81 LTR/Gypsy (968) 221 16 887502 350 29.4 3.9 0.8 chr3 127770126 127770252 (70252178) C MamGypLTR1a LTR/Gypsy (653) 131 1 887645 354 23.0 5.0 6.6 chr3 128256048 128256168 (69766262) + MamGypLTR1c LTR/Gypsy 57 175 (628) 888379 303 24.7 5.2 0.0 chr3 129133254 129133350 (68889080) + MamGypLTR1a LTR/Gypsy 627 728 (56) 890161 258 29.3 6.9 2.0 chr3 129674395 129674495 (68347935) + MamGypLTR2b LTR/Gypsy 789 894 (28) 891213 484 26.5 2.4 11.5 chr3 130033485 130033693 (67988737) + MamGypLTR1a LTR/Gypsy 18 207 (577) 891790 461 34.1 7.4 2.2 chr3 130035390 130035713 (67986717) + MamGypLTR1a LTR/Gypsy 430 770 (14) 891790 225 24.4 2.3 5.8 chr3 130795766 130795852 (67226578) C MamGypLTR1c LTR/Gypsy (716) 87 4 892816 470 33.0 8.7 1.2 chr3 131157540 131157781 (66864649) C MamGypLTR1a LTR/Gypsy (520) 264 5 893324 384 26.6 5.3 16.7 chr3 131561127 131561620 (66460810) + MamGypLTR2c LTR/Gypsy 659 1016 (52) 893934 311 26.4 14.7 0.0 chr3 131567019 131567147 (66455283) C LTR81A LTR/Gypsy (1185) 165 18 893944 784 26.8 6.5 1.4 chr3 131925558 131925848 (66096582) + LTR81A LTR/Gypsy 4 309 (1041) 894488 292 34.2 0.8 0.8 chr3 131926062 131926182 (66096248) + LTR81A LTR/Gypsy 348 468 (925) 894488 318 32.4 11.3 5.5 chr3 131926622 131926931 (66095499) + LTR81A LTR/Gypsy 907 1234 (159) 894488 373 29.7 11.8 0.5 chr3 132088077 132088279 (65934151) C MamGypLTR1b LTR/Gypsy (67) 715 490 894774 346 24.5 3.7 11.9 chr3 132088492 132088709 (65933721) C MamGypLTR1b LTR/Gypsy (582) 200 1 894774 385 35.5 3.5 2.5 chr3 132525535 132525736 (65496694) C LTR81 LTR/Gypsy (225) 964 761 895340 660 25.4 7.8 2.5 chr3 132823150 132823391 (65199039) C MamGypLTR2c LTR/Gypsy (4) 1064 810 895798 488 26.1 14.9 3.6 chr3 133650203 133650397 (64372033) + MamGypLTR1b LTR/Gypsy 551 767 (15) 897042 423 30.7 5.1 2.5 chr3 134018671 134018907 (64003523) C LTR81 LTR/Gypsy (242) 947 705 897568 482 33.5 1.1 4.2 chr3 134020378 134020567 (64001863) C LTR81B LTR/Gypsy (587) 806 623 897574 281 31.8 0.0 1.1 chr3 134021437 134021525 (64000905) C LTR81B LTR/Gypsy (994) 356 269 897574 439 34.0 5.2 3.0 chr3 134194360 134194626 (63827804) C MamGypLTR1b LTR/Gypsy (23) 759 487 897845 234 19.3 13.8 1.7 chr3 134194868 134194925 (63827505) C MamGypLTR1b LTR/Gypsy (681) 101 37 897846 288 31.4 3.3 7.3 chr3 134574473 134574623 (63447807) + LTR81C LTR/Gypsy 5 149 (1004) 898357 308 26.5 0.9 4.7 chr3 134642034 134642140 (63380290) C MamGypLTR1d LTR/Gypsy (16) 797 695 898442 470 27.6 9.7 2.0 chr3 134663297 134663492 (63358938) C MamGypLTR1b LTR/Gypsy (4) 778 568 898470 544 28.2 2.2 3.3 chr3 134934738 134934917 (63087513) C MamGypLTR1b LTR/Gypsy (3) 779 602 898813 888 27.1 15.4 3.6 chr3 135092595 135093028 (62929402) C MamGypLTR1a LTR/Gypsy (7) 777 318 899016 329 20.8 16.7 1.0 chr3 135093127 135093228 (62929202) C MamGypLTR1a LTR/Gypsy (694) 119 2 899016 303 26.2 7.5 18.1 chr3 135286454 135286802 (62735628) C MamGypLTR1c LTR/Gypsy (6) 797 486 899263 521 28.6 2.0 3.5 chr3 135393366 135393568 (62628862) C LTR81C LTR/Gypsy (123) 1030 831 899401 383 22.6 6.0 0.0 chr3 135480793 135480876 (62541554) C MamGypLTR1d LTR/Gypsy (2) 811 723 899528 1182 31.1 11.2 5.4 chr3 135481257 135481882 (62540548) C MamGypLTR1d LTR/Gypsy (151) 662 1 899528 741 27.4 10.4 7.7 chr3 135628112 135628177 (62394253) C MamGypLTR2c LTR/Gypsy (0) 1068 990 899722 741 27.4 10.4 7.7 chr3 135628470 135628817 (62393613) C MamGypLTR2c LTR/Gypsy (79) 989 643 899722 965 29.1 14.8 1.9 chr3 135769132 135769631 (62252799) C MamGypLTR1d LTR/Gypsy (10) 803 219 899921 343 24.2 0.7 13.2 chr3 136525313 136525464 (61496966) + LTR81A LTR/Gypsy 36 168 (1182) 901302 246 29.2 4.9 5.6 chr3 136525622 136525782 (61496648) + LTR81A LTR/Gypsy 599 785 (608) 901302 265 32.6 5.3 7.9 chr3 136750677 136750866 (61271564) + MamGypLTR2b LTR/Gypsy 1 185 (737) 901688 329 29.2 3.5 2.8 chr3 136751007 136751147 (61271283) + MamGypLTR2b LTR/Gypsy 773 914 (8) 901688 227 29.6 18.7 3.5 chr3 136785216 136785418 (61237012) C MamGypLTR2b LTR/Gypsy (679) 243 10 901740 227 16.3 2.0 0.0 chr3 136801514 136801562 (61220868) C MamGypLTR2b LTR/Gypsy (52) 870 821 901770 565 21.5 8.2 3.3 chr3 136852894 136853076 (61169354) + MamGypLTR2b LTR/Gypsy 729 920 (2) 901851 578 23.2 7.2 4.8 chr3 136919421 136919628 (61102802) + MamGypLTR2c LTR/Gypsy 856 1068 (0) 901948 359 33.3 8.3 1.9 chr3 136928845 136929000 (61093430) C MamGypLTR1b LTR/Gypsy (153) 629 464 901963 543 27.5 7.6 2.8 chr3 136929399 136929651 (61092779) C MamGypLTR1b LTR/Gypsy (521) 263 1 901963 439 28.3 16.6 4.6 chr3 137192151 137192391 (60830039) C MamGypLTR3 LTR/Gypsy (91) 748 479 902290 273 38.8 5.0 0.0 chr3 137580112 137580351 (60442079) C MamGyp-int LTR/Gypsy (1556) 3506 3255 902759 237 29.4 4.6 0.0 chr3 137682743 137682851 (60339579) C MamGypLTR2b LTR/Gypsy (2) 920 807 902867 308 22.4 0.0 0.0 chr3 138313663 138313720 (59708710) C MamGypLTR3 LTR/Gypsy (234) 605 548 903861 250 32.2 2.2 1.1 chr3 138314045 138314135 (59708295) C MamGypLTR3 LTR/Gypsy (611) 228 137 903862 248 23.5 0.0 0.0 chr3 138917599 138917649 (59104781) C MamGypLTR1a LTR/Gypsy (616) 168 118 905038 293 30.4 2.1 8.6 chr3 139033118 139033304 (58989126) + LTR81A LTR/Gypsy 978 1152 (198) 905216 286 32.8 8.7 2.9 chr3 139179753 139179959 (58842471) + MamGypLTR1b LTR/Gypsy 510 728 (54) 905418 295 27.8 4.0 5.0 chr3 139305516 139305644 (58716786) + MamGypLTR2c LTR/Gypsy 211 314 (1036) 905627 357 30.0 13.3 4.2 chr3 139306348 139306587 (58715843) + MamGypLTR2c LTR/Gypsy 783 1044 (24) 905627 253 15.0 0.0 2.4 chr3 139398229 139398269 (58624161) + LTR81A LTR/Gypsy 1232 1271 (79) 905755 590 19.4 12.7 2.1 chr3 139399048 139399183 (58623247) + LTR81C LTR/Gypsy 1 151 (1002) 905757 300 33.5 14.2 3.4 chr3 139662236 139662559 (58359871) C MamGypLTR1b LTR/Gypsy (99) 683 325 906139 331 26.8 4.7 3.1 chr3 139662609 139662735 (58359695) C MamGypLTR1b LTR/Gypsy (545) 237 109 906139 229 23.5 7.9 4.5 chr3 140191661 140191749 (57830681) C LTR81B LTR/Gypsy (9) 1180 1089 906913 563 33.2 5.2 6.7 chr3 140191763 140192155 (57830275) C LTR81B LTR/Gypsy (255) 1138 759 906913 563 33.2 5.2 6.7 chr3 140192983 140193050 (57829380) C LTR81B LTR/Gypsy (635) 758 684 906913 232 23.6 12.1 2.2 chr3 140193372 140193462 (57828968) C LTR81B LTR/Gypsy (1085) 308 209 906916 560 30.4 9.9 5.6 chr3 140260421 140260904 (57761526) C MamGypLTR1d LTR/Gypsy (307) 506 2 906989 237 30.7 11.0 3.4 chr3 140569148 140569265 (57453165) C MamGypLTR3 LTR/Gypsy (8) 831 705 907397 520 33.2 5.4 2.1 chr3 140900267 140900506 (57121924) C MamGypLTR1b LTR/Gypsy (16) 766 519 907871 232 29.2 19.8 4.8 chr3 140948521 140948772 (57073658) + LTR81C LTR/Gypsy 283 572 (581) 907938 340 27.5 4.4 3.7 chr3 141074076 141074211 (56948219) C MamGypLTR1b LTR/Gypsy (38) 744 608 908117 589 23.5 4.5 18.2 chr3 141195188 141195478 (56826952) + LTR81A LTR/Gypsy 1 251 (1099) 908286 518 32.1 2.0 3.1 chr3 141196468 141196697 (56825733) + LTR81 LTR/Gypsy 763 1199 (194) 908288 491 24.8 0.8 0.8 chr3 141197000 141197117 (56825313) + LTR81 LTR/Gypsy 1269 1386 (7) 908288 309 31.8 9.6 2.4 chr3 142375764 142376056 (55646374) C MamGypLTR1a LTR/Gypsy (15) 769 456 910412 602 25.2 6.4 7.6 chr3 142621197 142621445 (55400985) C MamGypLTR2c LTR/Gypsy (0) 1068 823 910788 267 26.4 21.0 5.2 chr3 143452616 143452756 (54569674) + MamGypLTR2b LTR/Gypsy 610 769 (153) 911946 267 26.4 21.0 5.2 chr3 143453069 143453174 (54569256) + MamGypLTR2b LTR/Gypsy 770 896 (26) 911946 305 31.9 6.8 1.6 chr3 143596184 143596374 (54426056) + MamGypLTR2c LTR/Gypsy 346 546 (522) 912130 286 30.7 8.0 0.0 chr3 143607409 143607545 (54414885) C MamGypLTR1a LTR/Gypsy (0) 784 637 912156 236 28.8 15.1 6.7 chr3 143608056 143608174 (54414256) C MamGypLTR1a LTR/Gypsy (573) 209 81 912156 261 27.9 15.7 5.9 chr3 143841735 143841989 (54180441) + LTR81B LTR/Gypsy 11 290 (899) 912487 394 29.2 12.8 3.8 chr3 143842724 143843011 (54179419) + LTR81B LTR/Gypsy 1051 1364 (29) 912487 263 36.6 7.2 4.7 chr3 143857528 143857775 (54164655) C MamGypLTR1d LTR/Gypsy (266) 537 296 912513 655 27.0 2.5 7.1 chr3 144639450 144639688 (53382742) + LTR81AB LTR/Gypsy 51 278 (0) 913526 249 30.2 9.0 8.1 chr3 144641426 144641659 (53380771) + LTR81AB LTR/Gypsy 1144 1379 (14) 913526 334 31.2 16.6 2.9 chr3 145408209 145408485 (52613945) + LTR81C LTR/Gypsy 836 1150 (3) 914516 230 39.1 0.0 2.1 chr3 145443156 145443249 (52579181) + LTR81C LTR/Gypsy 574 665 (488) 914565 345 30.3 9.3 5.0 chr3 146561605 146561882 (51460548) + LTR81B LTR/Gypsy 1090 1379 (14) 916034 417 30.5 11.1 7.9 chr3 146573160 146573512 (51448918) + LTR81A LTR/Gypsy 978 1341 (9) 916055 434 23.4 11.5 9.3 chr3 147404224 147404449 (50617981) + LTR81B LTR/Gypsy 45 275 (1118) 917086 512 26.2 1.3 5.7 chr3 148335170 148335327 (49687103) + LTR81C LTR/Gypsy 2 152 (1001) 918328 446 24.2 14.1 2.6 chr3 148653234 148653424 (49369006) C LTR81B LTR/Gypsy (33) 1360 1148 918760 321 36.2 4.5 6.3 chr3 148808350 148808747 (49213683) + MamGypLTR2c LTR/Gypsy 86 476 (592) 919007 459 23.9 5.6 0.0 chr3 148808966 148809107 (49213323) + MamGypLTR2b LTR/Gypsy 773 922 (0) 919008 259 32.4 12.2 0.0 chr3 149223925 149224063 (48798367) C MamGypLTR1d LTR/Gypsy (15) 798 643 919678 497 25.9 3.7 0.0 chr3 149224038 149224172 (48798258) C MamGypLTR1d LTR/Gypsy (673) 140 1 919678 989 31.5 14.7 1.6 chr3 149847942 149848090 (48174340) + MamGypLTR2c LTR/Gypsy 123 285 (783) 920665 989 30.7 12.2 2.4 chr3 149848500 149849191 (48173239) + MamGypLTR2c LTR/Gypsy 286 1021 (47) 920665 489 24.4 15.5 0.4 chr3 149877031 149877270 (48145160) C MamGypLTR1c LTR/Gypsy (8) 795 564 920712 360 34.3 9.2 2.1 chr3 149877401 149877665 (48144765) C MamGypLTR1c LTR/Gypsy (555) 513 102 920712 453 28.6 3.0 11.0 chr3 150547822 150548057 (47474373) C MamGypLTR3 LTR/Gypsy (68) 771 555 921844 229 29.6 2.8 1.4 chr3 150717605 150717676 (47304754) C MamGypLTR1a LTR/Gypsy (250) 534 462 922059 326 28.3 2.6 0.9 chr3 150861593 150861706 (47160724) C LTR81AB LTR/Gypsy (160) 118 3 922305 428 31.6 4.6 6.5 chr3 151380387 151380647 (46641783) + MamGypLTR2c LTR/Gypsy 813 1068 (0) 922977 437 34.6 3.3 0.6 chr3 151417482 151417664 (46604766) + MamGyp-int LTR/Gypsy 3933 4120 (942) 923027 296 31.8 4.7 0.8 chr3 151617805 151617931 (46404499) C MamGypLTR2c LTR/Gypsy (826) 242 111 923297 310 35.9 9.3 2.3 chr3 151619487 151619743 (46402687) C MamGypLTR2c LTR/Gypsy (684) 384 110 923298 333 33.8 0.0 0.8 chr3 151626120 151626253 (46396177) + MamGyp-int LTR/Gypsy 2621 2753 (2309) 923307 276 33.8 9.9 3.4 chr3 151841039 151841325 (46181105) C LTR81C LTR/Gypsy (33) 1360 877 923620 242 33.1 5.2 2.1 chr3 151841490 151841680 (46180750) C LTR81C LTR/Gypsy (1017) 333 137 923620 234 26.4 0.0 10.0 chr3 151852661 151852740 (46169690) C LTR81B LTR/Gypsy (226) 927 856 923644 728 28.5 8.0 4.6 chr3 151853273 151853621 (46168809) C LTR81B LTR/Gypsy (1009) 384 24 923644 395 25.9 4.3 10.1 chr3 151900807 151901064 (46121366) + LTR81B LTR/Gypsy 90 332 (1061) 923715 381 25.0 6.4 5.1 chr3 151923732 151923887 (46098543) C MamGypLTR1b LTR/Gypsy (2) 780 623 923741 401 31.3 11.5 9.4 chr3 152170024 152170700 (45851730) C MamGypLTR1b LTR/Gypsy (9) 773 83 924082 271 20.3 0.0 20.8 chr3 152195116 152195264 (45827166) C MamGypLTR2b LTR/Gypsy (43) 879 762 924117 432 28.9 14.0 5.3 chr3 152275257 152275556 (45746874) + MamGypLTR1c LTR/Gypsy 1 326 (477) 924227 927 27.6 12.0 5.7 chr3 152276397 152276746 (45745684) + MamGypLTR1c LTR/Gypsy 430 801 (2) 924227 293 36.9 0.6 1.8 chr3 152495320 152495490 (45526940) C MamGypLTR1c LTR/Gypsy (329) 474 294 924533 278 27.2 2.5 11.4 chr3 152516896 152517047 (45505383) C LTR81B LTR/Gypsy (225) 1168 1065 924564 386 26.8 9.6 1.6 chr3 152567667 152567791 (45454639) C MamGypLTR1d LTR/Gypsy (35) 778 644 924618 323 27.7 4.5 4.8 chr3 152714006 152714211 (45308219) + MamGypLTR1d LTR/Gypsy 290 523 (290) 924859 334 30.0 18.4 4.9 chr3 153763144 153763388 (44259042) + MamGypLTR1a LTR/Gypsy 106 383 (401) 926445 326 37.0 1.2 1.2 chr3 153763524 153763690 (44258740) + MamGypLTR1a LTR/Gypsy 610 776 (8) 926445 373 24.8 19.5 0.0 chr3 154429719 154429867 (43592563) + MamGypLTR2b LTR/Gypsy 713 890 (32) 927387 287 35.0 17.1 1.8 chr3 154446602 154446823 (43575607) C MamGypLTR1a LTR/Gypsy (78) 704 449 927411 320 30.4 9.7 3.3 chr3 154504416 154504685 (43517745) C MamGypLTR2c LTR/Gypsy (805) 263 34 927485 391 31.9 10.1 2.7 chr3 154895492 154895710 (43126720) C MamGypLTR1b LTR/Gypsy (30) 752 518 927963 494 35.9 6.9 2.1 chr3 155162513 155162845 (42859585) C MamGyp-int LTR/Gypsy (861) 4201 3853 928317 391 33.6 6.5 4.7 chr3 155725725 155726214 (42296216) + LTR81C LTR/Gypsy 336 851 (499) 929199 256 14.6 0.0 4.0 chr3 155726731 155726780 (42295650) + MamGypLTR2c LTR/Gypsy 735 782 (286) 929203 239 37.0 0.0 0.0 chr3 155778018 155778109 (42244321) C LTR81 LTR/Gypsy (727) 462 371 929270 341 21.2 17.9 4.1 chr3 155778485 155778607 (42243823) C LTR81A LTR/Gypsy (1195) 155 16 929272 273 30.8 17.0 1.5 chr3 155805037 155805172 (42217258) C MamGypLTR2c LTR/Gypsy (77) 991 892 929306 434 23.2 32.6 1.6 chr3 155827571 155827754 (42194676) C MamGypLTR2c LTR/Gypsy (83) 985 745 929345 731 28.9 10.4 8.7 chr3 156024447 156024919 (41997511) + MamGypLTR1a LTR/Gypsy 301 781 (3) 929577 506 30.5 11.5 3.3 chr3 156047628 156047871 (41974559) + MamGypLTR2b LTR/Gypsy 583 846 (76) 929613 255 23.3 4.0 2.7 chr3 156494811 156494885 (41527545) + LTR81AB LTR/Gypsy 123 198 (80) 930244 749 28.3 5.0 3.0 chr3 156809600 156809898 (41212532) + LTR81B LTR/Gypsy 1 305 (1088) 930662 263 27.3 2.1 6.4 chr3 156810790 156810878 (41211552) + LTR81B LTR/Gypsy 876 960 (193) 930662 304 22.9 2.3 3.5 chr3 156810906 156810991 (41211439) + LTR81B LTR/Gypsy 1093 1177 (12) 930662 280 37.0 0.7 3.6 chr3 156924830 156924969 (41097461) + MamGypLTR2c LTR/Gypsy 323 458 (610) 930848 301 29.3 4.9 7.4 chr3 156926716 156926877 (41095553) + LTR81A LTR/Gypsy 1034 1191 (159) 930851 577 22.9 2.7 1.4 chr3 156954799 156954944 (41067486) C MamGypLTR2c LTR/Gypsy (2) 1066 919 930902 431 32.0 12.3 7.3 chr3 156955198 156955716 (41066714) C MamGypLTR2c LTR/Gypsy (523) 545 1 930903 246 27.7 2.4 8.8 chr3 156966198 156966367 (41056063) + MamGypLTR2b LTR/Gypsy 742 900 (22) 930919 501 33.3 9.5 2.6 chr3 157044171 157044558 (40977872) + LTR81B LTR/Gypsy 128 542 (851) 931046 413 28.2 14.6 3.3 chr3 157044997 157045271 (40977159) + LTR81B LTR/Gypsy 834 1139 (14) 931046 323 31.8 9.7 11.6 chr3 157230583 157230952 (40791478) + MamGypLTR3 LTR/Gypsy 477 839 (0) 931294 253 29.9 9.1 7.0 chr3 157252950 157253136 (40769294) C MamGypLTR1d LTR/Gypsy (610) 203 13 931326 287 16.1 8.1 0.0 chr3 157313764 157313825 (40708605) + MamGypLTR1d LTR/Gypsy 747 813 (0) 931390 324 31.9 6.7 1.0 chr3 157314662 157314870 (40707560) C MamGypLTR1c LTR/Gypsy (0) 803 583 931393 625 32.8 7.7 6.5 chr3 157657942 157658369 (40364061) C LTR81C LTR/Gypsy (7) 1146 714 931822 443 28.3 3.3 5.0 chr3 157658881 157659062 (40363368) C LTR81C LTR/Gypsy (975) 375 197 931822 417 21.4 2.2 0.0 chr3 157660455 157660543 (40361887) C LTR81C LTR/Gypsy (1259) 91 1 931822 280 19.2 8.9 1.3 chr3 158284314 158284392 (39738038) + MamGypLTR1d LTR/Gypsy 704 788 (25) 932638 225 18.8 0.0 4.0 chr3 158489892 158489941 (39532489) C MamGypLTR1c LTR/Gypsy (755) 48 1 932944 419 35.4 3.1 8.3 chr3 158720894 158721217 (39301213) C MamGypLTR2b LTR/Gypsy (185) 737 431 933248 379 22.2 2.0 2.0 chr3 158725168 158725268 (39297162) + LTR81B LTR/Gypsy 159 259 (1134) 933256 507 16.9 7.3 4.8 chr3 159404493 159404616 (38617814) C MamGypLTR2c LTR/Gypsy (60) 1008 882 934190 359 16.1 12.6 0.0 chr3 159405200 159405286 (38617144) C MamGypLTR2c LTR/Gypsy (950) 118 21 934190 412 34.6 4.5 0.0 chr3 159890209 159890364 (38132066) + LTR81A LTR/Gypsy 800 962 (388) 934949 239 28.8 0.0 2.9 chr3 159890961 159891028 (38131402) + LTR81C LTR/Gypsy 861 926 (263) 934950 271 28.0 8.9 1.0 chr3 159891909 159892009 (38130421) + LTR81C LTR/Gypsy 913 1021 (132) 934950 325 19.8 4.6 7.3 chr3 160170033 160170141 (37852289) + MamGypLTR1c LTR/Gypsy 96 201 (602) 935361 255 32.9 0.0 1.2 chr3 160171707 160171789 (37850641) + MamGypLTR1c LTR/Gypsy 371 452 (332) 935361 504 31.5 11.2 6.7 chr3 160195322 160195872 (37826558) + MamGypLTR3 LTR/Gypsy 137 712 (127) 935401 550 22.4 9.6 2.5 chr3 160369311 160369507 (37652923) C MamGypLTR2b LTR/Gypsy (41) 881 671 935682 281 29.7 4.2 3.5 chr3 160369600 160369742 (37652688) C MamGypLTR2b LTR/Gypsy (476) 446 303 935682 337 27.0 2.9 11.9 chr3 160370692 160370901 (37651529) C LTR81A LTR/Gypsy (1142) 208 18 935685 275 23.5 8.5 1.2 chr3 160371717 160371798 (37650632) C MamGypLTR2b LTR/Gypsy (166) 756 669 935687 435 23.6 2.0 4.6 chr3 160446633 160446783 (37575647) + MamGypLTR3 LTR/Gypsy 663 809 (30) 935825 266 35.2 2.1 2.1 chr3 160595157 160595249 (37427181) C MamGypLTR1c LTR/Gypsy (252) 551 459 936058 464 23.0 0.9 2.6 chr3 160770303 160770418 (37252012) C LTR81A LTR/Gypsy (1178) 172 59 936303 654 28.9 10.2 5.7 chr3 160883907 160884328 (37138102) + LTR81B LTR/Gypsy 950 1390 (3) 936466 284 21.4 21.4 0.0 chr3 161030924 161031007 (36991423) C LTR81 LTR/Gypsy (247) 942 841 936700 498 25.3 5.6 1.9 chr3 161034447 161034607 (36987823) + MamGypLTR1c LTR/Gypsy 1 167 (636) 936705 282 30.6 6.4 0.2 chr3 161035885 161036040 (36986390) + MamGypLTR1c LTR/Gypsy 595 765 (48) 936710 275 34.0 9.8 0.8 chr3 161135956 161136210 (36886220) + LTR81A LTR/Gypsy 1070 1347 (3) 936852 247 25.9 7.7 4.3 chr3 161163862 161163978 (36858452) C LTR81A LTR/Gypsy (1186) 164 44 936892 228 33.5 11.0 3.5 chr3 161270064 161270236 (36752194) + MamGypLTR2c LTR/Gypsy 177 362 (706) 937059 367 15.4 0.9 1.2 chr3 161270607 161270690 (36751740) + MamGypLTR2b LTR/Gypsy 838 898 (24) 937060 227 18.9 0.0 0.0 chr3 161298795 161298831 (36723599) C MamGypLTR2c LTR/Gypsy (146) 922 886 937096 570 22.6 4.4 6.7 chr3 161512282 161512461 (36509969) C MamGypLTR1b LTR/Gypsy (1) 781 606 937403 238 36.4 4.9 1.6 chr3 161512710 161512832 (36509598) C MamGypLTR1a LTR/Gypsy (538) 246 120 937404 258 22.5 2.3 7.0 chr3 161750666 161750751 (36271679) C LTR81AB LTR/Gypsy (8) 270 189 937701 252 26.1 17.1 5.5 chr3 161751422 161751620 (36270810) C MamGypLTR2b LTR/Gypsy (24) 898 677 937702 253 37.4 2.7 2.0 chr3 161864427 161864576 (36157854) C MamGypLTR3 LTR/Gypsy (59) 780 630 937838 231 28.0 1.0 5.1 chr3 162451926 162452023 (35570407) + LTR81C LTR/Gypsy 1002 1095 (58) 938574 475 33.3 9.7 3.9 chr3 162595729 162596037 (35426393) + MamGypLTR1b LTR/Gypsy 444 770 (12) 938775 320 38.6 8.5 1.4 chr3 162596934 162597156 (35425274) + MamGyp-int LTR/Gypsy 853 1091 (3971) 938776 272 38.5 4.3 3.1 chr3 163133375 163133725 (34888705) C MamGypLTR3 LTR/Gypsy (89) 750 396 939428 247 29.2 8.3 0.0 chr3 163648676 163648747 (34373683) C MamGypLTR3 LTR/Gypsy (132) 707 630 940111 325 31.6 20.0 6.3 chr3 164431442 164431836 (33590594) C MamGypLTR1a LTR/Gypsy (327) 457 9 941126 287 28.9 6.2 7.3 chr3 165571202 165571380 (32451050) C MamGypLTR2c LTR/Gypsy (21) 1047 871 942747 324 36.8 5.4 2.9 chr3 165571551 165571791 (32450639) C LTR81C LTR/Gypsy (393) 760 514 942748 494 36.5 4.0 1.0 chr3 165614249 165614450 (32407980) + MamGyp-int LTR/Gypsy 1811 2018 (3044) 942801 776 34.1 5.7 0.3 chr3 165614527 165614879 (32407551) + MamGyp-int LTR/Gypsy 2139 2510 (2552) 942801 239 28.9 1.7 5.0 chr3 165918983 165919102 (32103328) + MamGypLTR2b LTR/Gypsy 775 890 (32) 943184 346 27.9 4.8 0.0 chr3 166477401 166477504 (31544926) C MamGypLTR2c LTR/Gypsy (11) 1057 949 943922 376 24.6 9.7 1.6 chr3 167571838 167571961 (30450469) C MamGypLTR1c LTR/Gypsy (18) 785 652 945322 319 24.1 8.7 13.1 chr3 167645159 167645387 (30377043) C LTR81B LTR/Gypsy (1090) 303 85 945431 594 35.4 7.1 1.8 chr3 167653770 167654208 (30368222) + MamGypLTR1b LTR/Gypsy 260 729 (55) 945448 272 34.9 10.5 0.2 chr3 167696598 167696878 (30325552) C LTR81C LTR/Gypsy (521) 668 347 945503 284 35.3 4.3 11.8 chr3 167883794 167884210 (30138220) C MamGypLTR1d LTR/Gypsy (86) 727 342 945746 243 20.4 0.0 0.0 chr3 167923361 167923404 (30099026) C MamGypLTR1d LTR/Gypsy (1) 812 769 945798 290 31.2 13.4 2.4 chr3 167924204 167924367 (30098063) + MamGypLTR1c LTR/Gypsy 266 447 (356) 945801 409 29.4 5.8 3.0 chr3 168252559 168252867 (29769563) C LTR81C LTR/Gypsy (132) 1021 656 946287 903 31.6 8.5 1.5 chr3 169099798 169100199 (28922231) + MamGypLTR1a LTR/Gypsy 1 430 (354) 947368 267 27.4 8.6 3.3 chr3 169509984 169510134 (28512296) C LTR81B LTR/Gypsy (8) 1385 1227 947891 281 28.9 1.1 2.2 chr3 169575849 169575940 (28446490) + LTR81B LTR/Gypsy 1 91 (1062) 948006 328 27.6 12.9 0.8 chr3 169576117 169576240 (28446190) + LTR81B LTR/Gypsy 1255 1393 (0) 948006 302 24.5 5.9 6.7 chr3 169625517 169625665 (28396765) + LTR81B LTR/Gypsy 153 304 (1046) 948105 496 27.9 17.4 3.4 chr3 169626273 169626565 (28395865) + LTR81B LTR/Gypsy 1051 1384 (9) 948105 404 29.3 10.0 1.9 chr3 170043245 170043404 (27979026) + MamGypLTR1b LTR/Gypsy 502 674 (108) 948872 440 31.8 2.0 1.3 chr3 170175583 170175732 (27846698) + LTR81C LTR/Gypsy 136 286 (903) 949127 994 31.5 13.4 2.2 chr3 170176235 170176931 (27845499) + LTR81C LTR/Gypsy 434 1189 (0) 949127 248 26.7 6.6 1.1 chr3 170531807 170531897 (27490533) + MamGypLTR2b LTR/Gypsy 61 156 (912) 949646 490 22.0 5.7 2.6 chr3 170532604 170532768 (27489662) + MamGypLTR2b LTR/Gypsy 667 905 (17) 949646 263 29.9 8.3 5.9 chr3 171368214 171368501 (26653929) + MamGypLTR2b LTR/Gypsy 577 871 (51) 950877 266 31.6 9.8 4.9 chr3 171695811 171696013 (26326417) + LTR81A LTR/Gypsy 273 485 (865) 951377 248 29.4 3.7 5.3 chr3 171697225 171697411 (26325019) + LTR81A LTR/Gypsy 1030 1213 (137) 951377 610 29.3 6.6 12.8 chr3 172241471 172241968 (25780462) C LTR81B LTR/Gypsy (926) 467 1 952165 300 36.1 9.0 0.0 chr3 172369840 172370005 (25652425) + MamGypLTR1c LTR/Gypsy 314 494 (309) 952391 438 28.4 5.7 4.0 chr3 172370242 172370417 (25652013) + MamGypLTR1c LTR/Gypsy 556 734 (69) 952391 317 34.9 10.0 3.6 chr3 172447432 172447651 (25574779) + MamGypLTR1b LTR/Gypsy 346 579 (203) 952524 291 33.0 1.7 0.8 chr3 172981577 172981695 (25040735) C MamGypLTR2c LTR/Gypsy (74) 994 875 953238 397 27.1 5.6 5.8 chr3 173407348 173407620 (24614810) C LTR81B LTR/Gypsy (1067) 283 18 953800 317 32.9 14.6 5.8 chr3 173631683 173631956 (24390474) C MamGypLTR1c LTR/Gypsy (115) 667 370 954120 496 25.4 15.4 4.5 chr3 173632006 173632252 (24390178) C MamGypLTR1c LTR/Gypsy (497) 316 43 954120 686 34.0 5.5 1.0 chr3 174078222 174078533 (23943897) + MamGyp-int LTR/Gypsy 2068 2393 (2669) 954772 389 38.3 2.3 3.8 chr3 174081368 174081630 (23940800) + MamGyp-int LTR/Gypsy 4318 4576 (486) 954772 242 28.2 17.2 2.2 chr3 174117172 174117305 (23905125) C LTR81B LTR/Gypsy (140) 1253 1100 954834 263 22.4 4.5 0.0 chr3 174141799 174141865 (23880565) C MamGypLTR3 LTR/Gypsy (93) 746 677 954870 599 34.8 7.9 6.0 chr3 174870867 174871370 (23151060) C MamGypLTR3 LTR/Gypsy (50) 789 276 955900 386 32.1 6.2 0.6 chr3 175063152 175063311 (22959119) + LTR81C LTR/Gypsy 7 175 (978) 956164 314 27.9 9.3 4.9 chr3 175629271 175629432 (22392998) + MamGypLTR3 LTR/Gypsy 636 804 (35) 956972 432 32.5 8.8 8.1 chr3 175890299 175890606 (22131824) + MamGypLTR3 LTR/Gypsy 78 387 (452) 957301 247 32.2 6.5 4.6 chr3 175924156 175924308 (22098122) + MamGypLTR2b LTR/Gypsy 468 623 (299) 957358 334 36.0 9.4 3.6 chr3 176450334 176450641 (21571789) C MamGypLTR1b LTR/Gypsy (0) 782 457 958038 359 27.8 2.7 4.3 chr3 176516757 176516940 (21505490) + MamGypLTR2b LTR/Gypsy 742 922 (0) 958146 1119 29.9 14.9 5.6 chr3 176714492 176715174 (21307256) C MamGypLTR1d LTR/Gypsy (1) 812 66 958415 229 15.5 3.4 1.7 chr3 176837149 176837207 (21185223) C MamGypLTR3 LTR/Gypsy (19) 820 761 958607 236 15.5 3.4 1.7 chr3 176896477 176896535 (21125895) + MamGypLTR3 LTR/Gypsy 761 820 (19) 958726 633 32.9 18.6 2.2 chr3 177047721 177048042 (20974388) + MamGypLTR1b LTR/Gypsy 323 711 (71) 959048 284 29.4 0.0 11.4 chr3 177048347 177048429 (20974001) + MamGypLTR1b LTR/Gypsy 712 781 (1) 959048 417 23.3 10.9 3.8 chr3 177105322 177105531 (20916899) + MamGypLTR2b LTR/Gypsy 697 921 (1) 959154 604 26.1 8.2 10.8 chr3 177137862 177138166 (20884264) C MamGypLTR2b LTR/Gypsy (27) 895 599 959200 253 25.3 4.0 1.3 chr3 177142269 177142344 (20880086) C MamGypLTR1b LTR/Gypsy (51) 731 654 959207 527 24.4 2.4 1.6 chr3 177206187 177206311 (20816119) C LTR81AB LTR/Gypsy (1) 1152 1027 959309 248 32.4 8.6 2.9 chr3 177207816 177207955 (20814475) C LTR81AB LTR/Gypsy (248) 941 794 959309 952 22.4 8.9 1.3 chr3 177208555 177208855 (20813575) C LTR81AB LTR/Gypsy (1017) 333 1 959309 340 33.3 14.8 3.1 chr3 177282730 177282958 (20739472) C MamGypLTR3 LTR/Gypsy (62) 777 522 959423 264 32.0 6.0 2.6 chr3 177290409 177290559 (20731871) + MamGypLTR1d LTR/Gypsy 649 804 (9) 959431 808 22.2 18.0 4.0 chr3 177312320 177312675 (20709755) C LTR81B LTR/Gypsy (972) 421 3 959481 420 25.7 7.7 8.2 chr3 177365190 177365422 (20657008) C MamGypLTR2c LTR/Gypsy (7) 1061 830 959547 378 34.5 15.8 4.9 chr3 177365720 177366125 (20656305) C MamGypLTR2c LTR/Gypsy (612) 456 7 959547 316 30.2 11.0 2.3 chr3 177376532 177376704 (20645726) C MamGypLTR1b LTR/Gypsy (38) 744 557 959556 562 23.2 8.1 10.2 chr3 178996872 178997154 (19025276) + LTR81B LTR/Gypsy 20 296 (1097) 961809 265 30.9 1.6 2.3 chr3 179538971 179539099 (18483331) + MamGypLTR1a LTR/Gypsy 657 784 (0) 962856 235 26.9 7.5 1.9 chr3 179579506 179579611 (18442819) + MamGypLTR1b LTR/Gypsy 671 782 (0) 962943 432 29.2 5.3 0.0 chr3 179780526 179780638 (18241792) C MamGyp-int LTR/Gypsy (4125) 937 819 963246 232 23.2 3.6 0.0 chr3 180128676 180128731 (17893699) + MamGypLTR2b LTR/Gypsy 639 696 (226) 963725 439 32.6 14.9 5.6 chr3 180214483 180215424 (17807006) + MamGypLTR2c LTR/Gypsy 40 1068 (0) 963825 352 21.7 5.9 3.4 chr3 180445062 180445180 (17577250) + MamGypLTR2b LTR/Gypsy 789 910 (12) 964151 609 25.6 3.3 5.5 chr3 180855120 180855432 (17166998) + LTR81B LTR/Gypsy 111 421 (929) 964790 491 30.4 10.5 2.3 chr3 180855915 180856165 (17166265) + LTR81B LTR/Gypsy 680 960 (229) 964790 235 22.9 6.2 0.0 chr3 182332603 182332650 (15689780) C MamGypLTR1b LTR/Gypsy (320) 462 412 967107 335 35.6 3.3 4.5 chr3 182363964 182364322 (15658108) + MamGypLTR2b LTR/Gypsy 556 910 (12) 967163 1059 33.0 6.2 0.6 chr3 182474246 182474714 (15547716) + MamGypLTR1a LTR/Gypsy 58 552 (232) 967344 611 25.9 7.6 0.6 chr3 182474744 182474914 (15547516) + MamGypLTR1a LTR/Gypsy 602 784 (0) 967344 721 29.1 3.5 3.5 chr3 183106441 183106700 (14915730) + MamGypLTR1b LTR/Gypsy 523 782 (0) 968387 428 31.3 7.3 3.8 chr3 183236537 183236825 (14785605) + MamGypLTR2c LTR/Gypsy 52 350 (718) 968604 448 29.3 20.6 4.9 chr3 183236859 183237386 (14785044) + MamGypLTR2b LTR/Gypsy 258 868 (54) 968605 261 17.4 0.0 3.4 chr3 183237718 183237784 (14784646) + MamGypLTR1a LTR/Gypsy 739 806 (7) 968608 305 29.6 13.9 2.3 chr3 183413963 183414135 (14608295) C LTR81C LTR/Gypsy (738) 415 223 968964 266 29.8 9.9 9.2 chr3 183830839 183831122 (14191308) C LTR81B LTR/Gypsy (886) 507 222 969780 326 31.7 2.7 2.7 chr3 183841968 183842113 (14180317) C LTR81B LTR/Gypsy (1245) 148 3 969803 698 22.3 5.1 7.4 chr3 184247384 184247640 (13774790) + LTR81AB LTR/Gypsy 23 273 (5) 970563 245 27.3 5.0 2.0 chr3 184248767 184248867 (13773563) + LTR81AB LTR/Gypsy 829 932 (257) 970563 396 33.3 5.0 8.3 chr3 186129535 186129897 (11892533) + MamGypLTR1a LTR/Gypsy 427 777 (7) 973898 784 32.2 4.6 10.0 chr3 186396350 186396911 (11625519) C MamGypLTR1c LTR/Gypsy (10) 793 277 974342 341 26.2 6.1 3.8 chr3 186397190 186397314 (11625116) C MamGypLTR1c LTR/Gypsy (675) 128 1 974342 1196 31.0 6.4 8.9 chr3 186410779 186411447 (11610983) C MamGypLTR1c LTR/Gypsy (8) 795 130 974366 1196 31.0 6.4 8.9 chr3 186411587 186411732 (11610698) C MamGypLTR1c LTR/Gypsy (674) 129 1 974366 972 33.1 4.6 5.8 chr3 186426593 186427131 (11595299) C MamGypLTR1d LTR/Gypsy (4) 809 277 974396 326 25.6 6.9 4.6 chr3 186427406 186427536 (11594894) C MamGypLTR1d LTR/Gypsy (669) 134 1 974396 263 24.2 16.5 3.8 chr3 186949612 186949744 (11072686) + MamGypLTR2c LTR/Gypsy 52 201 (867) 975355 666 29.5 8.5 8.3 chr3 188826640 188827441 (9194989) + MamGypLTR1c LTR/Gypsy 15 810 (3) 978407 249 33.4 8.6 6.4 chr3 189086198 189086476 (8935954) + MamGypLTR1c LTR/Gypsy 138 593 (220) 978837 401 31.1 3.6 1.6 chr3 189086533 189086725 (8935705) + MamGypLTR1c LTR/Gypsy 599 795 (8) 978837 254 29.9 9.3 4.3 chr3 189119732 189119871 (8902559) + MamGypLTR1d LTR/Gypsy 41 187 (626) 978893 680 29.5 6.1 10.2 chr3 189177922 189178412 (8844018) + LTR81A LTR/Gypsy 2 472 (878) 978991 457 31.5 7.0 8.0 chr3 189196755 189197068 (8825362) C LTR81B LTR/Gypsy (164) 1229 919 979028 265 34.1 1.8 11.2 chr3 189197206 189197482 (8824948) C LTR81B LTR/Gypsy (706) 687 437 979028 386 19.1 1.1 2.2 chr3 189629400 189629490 (8392940) C MamGypLTR1c LTR/Gypsy (0) 803 714 979655 256 33.7 9.5 6.4 chr3 189629653 189629979 (8392451) C MamGypLTR1c LTR/Gypsy (222) 591 255 979655 804 33.1 14.2 1.7 chr3 189804236 189804819 (8217611) + LTR81A LTR/Gypsy 688 1344 (6) 979925 340 29.7 7.9 0.7 chr3 190482467 190482605 (7539825) C MamGypLTR1a LTR/Gypsy (0) 784 636 980981 306 30.5 5.8 1.3 chr3 190883984 190884139 (7138291) C MamGypLTR2c LTR/Gypsy (21) 1047 885 981526 353 35.1 3.9 7.3 chr3 191668571 191668748 (6353682) + LTR81 LTR/Gypsy 807 978 (211) 982601 368 39.6 8.0 4.3 chr3 192310082 192310641 (5711789) C MamGypLTR2c LTR/Gypsy (314) 754 174 983527 327 31.7 14.0 1.6 chr3 192404306 192404491 (5617939) + MamGypLTR1a LTR/Gypsy 14 222 (562) 983700 254 25.8 7.5 6.8 chr3 192405207 192405339 (5617091) + MamGypLTR1a LTR/Gypsy 597 730 (54) 983700 548 24.6 4.9 1.1 chr3 192834538 192834722 (5187708) C LTR81A LTR/Gypsy (1158) 192 1 984381 270 21.8 3.8 1.3 chr3 193059542 193059620 (4962810) + MamGypLTR2b LTR/Gypsy 819 899 (23) 984676 234 26.6 10.8 1.8 chr3 193291617 193291727 (4730703) C LTR81B LTR/Gypsy (1153) 240 120 985060 267 28.2 18.9 0.6 chr3 193299551 193299714 (4722716) C MamGypLTR1a LTR/Gypsy (561) 223 30 985078 453 28.9 7.4 7.1 chr3 193895297 193895605 (4126825) C MamGypLTR1b LTR/Gypsy (0) 782 473 986013 247 26.6 29.4 1.7 chr3 193895788 193895967 (4126463) C MamGypLTR1b LTR/Gypsy (553) 231 2 986013 239 30.9 9.6 3.2 chr3 193910878 193911034 (4111396) C MamGypLTR2c LTR/Gypsy (841) 227 61 986045 412 29.4 3.0 3.0 chr3 193936232 193936396 (4086034) + MamGypLTR1a LTR/Gypsy 620 784 (0) 986087 533 28.9 13.8 3.5 chr3 194294252 194294729 (3727701) + MamGypLTR3 LTR/Gypsy 71 597 (242) 986713 488 28.2 2.0 10.9 chr3 194295127 194295178 (3727252) + MamGypLTR3 LTR/Gypsy 615 658 (181) 986713 488 28.2 2.0 10.9 chr3 194295480 194295673 (3726757) + MamGypLTR3 LTR/Gypsy 659 839 (0) 986713 256 31.6 7.5 3.1 chr3 194649008 194649167 (3373263) + MamGypLTR3 LTR/Gypsy 657 823 (16) 987357 1000 30.6 10.4 2.5 chr3 195482881 195483369 (2539061) + MamGypLTR1d LTR/Gypsy 235 762 (51) 988895 263 23.6 5.6 0.0 chr3 196177848 196177919 (1844511) C MamGypLTR1d LTR/Gypsy (4) 809 734 990304 628 26.0 16.9 7.0 chr3 196751571 196751996 (1270434) + MamGypLTR1c LTR/Gypsy 15 482 (321) 991465 341 22.6 2.4 0.0 chr3 196752103 196752186 (1270244) + MamGypLTR1c LTR/Gypsy 703 788 (25) 991465 628 35.6 9.4 1.4 chr3 196912069 196912484 (1109946) + MamGyp-int LTR/Gypsy 3347 3795 (1267) 991717 344 30.2 0.0 1.1 chr3 197062103 197062189 (960241) + LTR81C LTR/Gypsy 63 148 (1005) 991963 227 25.0 5.4 2.7 chr3 197095299 197095372 (927058) + LTR81A LTR/Gypsy 173 248 (1102) 992031 523 28.0 7.3 2.0 chr3 197166288 197166491 (855939) + LTR81A LTR/Gypsy 264 478 (915) 992121 587 29.0 10.9 1.1 chr3 197167052 197167316 (855114) + LTR81A LTR/Gypsy 1060 1350 (0) 992121 226 29.7 9.4 10.6 chr3 197799001 197799256 (223174) + MamGypLTR3 LTR/Gypsy 492 744 (95) 993307 258 34.0 1.0 0.0 chr4 2143782 2143884 (189010392) C MamGypLTR2c LTR/Gypsy (944) 124 21 996145 251 33.3 2.5 0.0 chr4 2465761 2465841 (188688435) + MamGypLTR1b LTR/Gypsy 529 611 (171) 996590 254 21.8 4.2 7.2 chr4 3331382 3331536 (187822740) + MamGypLTR1d LTR/Gypsy 718 879 (43) 998018 458 26.2 7.7 2.8 chr4 4077300 4077500 (187076776) C MamGypLTR1a LTR/Gypsy (3) 779 573 998964 1057 31.1 13.8 3.2 chr4 4618749 4619503 (186534773) C LTR81C LTR/Gypsy (10) 1143 309 999984 430 28.6 4.9 6.2 chr4 4724093 4724316 (186429960) C MamGypLTR2c LTR/Gypsy (36) 1032 812 1000233 452 28.7 4.4 0.7 chr4 4727984 4728120 (186426156) + MamGypLTR3 LTR/Gypsy 555 696 (143) 1000241 404 26.0 6.2 3.8 chr4 5545826 5545985 (185608291) + MamGypLTR2b LTR/Gypsy 706 869 (53) 1001619 347 32.1 8.7 1.0 chr4 6345881 6346075 (184808201) + MamGypLTR1d LTR/Gypsy 596 805 (8) 1003054 345 32.0 13.2 0.6 chr4 6681769 6681950 (184472326) C MamGyp-int LTR/Gypsy (2639) 2423 2219 1003737 295 23.8 2.8 4.7 chr4 7212758 7212863 (183941413) C MamGypLTR1a LTR/Gypsy (3) 781 678 1004678 461 25.0 8.4 3.4 chr4 9035703 9035880 (182118396) + MamGypLTR1b LTR/Gypsy 590 776 (6) 1007462 499 25.0 7.7 2.8 chr4 9568498 9568678 (181585598) + MamGypLTR1b LTR/Gypsy 590 779 (3) 1008034 230 30.9 7.0 2.3 chr4 9629744 9629829 (181524447) C MamGypLTR1d LTR/Gypsy (400) 403 314 1008125 260 31.9 14.1 3.1 chr4 9630316 9630506 (181523770) C MamGypLTR1d LTR/Gypsy (545) 268 57 1008125 370 30.1 6.2 5.4 chr4 10834029 10834288 (180319988) C LTR81B LTR/Gypsy (1105) 288 27 1009910 459 27.3 15.0 4.2 chr4 11035449 11035708 (180118568) + MamGypLTR1b LTR/Gypsy 482 769 (13) 1010265 297 28.8 1.4 1.4 chr4 11039480 11039553 (180114723) + MamGypLTR1b LTR/Gypsy 99 172 (610) 1010274 544 31.4 10.4 6.5 chr4 11220773 11221174 (179933102) C MamGypLTR1b LTR/Gypsy (0) 782 365 1010565 296 17.7 2.4 3.7 chr4 11257821 11257902 (179896374) C MamGypLTR1b LTR/Gypsy (14) 768 688 1010611 448 28.3 7.1 0.0 chr4 11465782 11465965 (179688311) C LTR81B LTR/Gypsy (0) 1393 1197 1010967 401 33.3 7.4 3.7 chr4 11466276 11466733 (179687543) + LTR81B LTR/Gypsy 395 869 (524) 1010968 535 33.2 2.5 9.3 chr4 11664675 11665029 (179489247) + LTR81B LTR/Gypsy 438 768 (625) 1011316 257 23.8 5.0 8.4 chr4 11665239 11665397 (179488879) + LTR81B LTR/Gypsy 775 902 (251) 1011316 231 27.7 1.2 2.4 chr4 11665478 11665562 (179488714) + LTR81B LTR/Gypsy 1225 1308 (42) 1011316 229 32.4 8.0 3.6 chr4 11862154 11862265 (179292011) + MamGypLTR2b LTR/Gypsy 508 624 (298) 1011621 314 32.3 3.9 0.8 chr4 11865464 11865591 (179288685) + MamGypLTR2b LTR/Gypsy 493 624 (298) 1011627 244 26.0 6.8 0.0 chr4 12024312 12024384 (179129892) + LTR81B LTR/Gypsy 1093 1170 (223) 1011864 403 28.9 3.7 6.0 chr4 13088796 13089012 (178065264) C LTR81AB LTR/Gypsy (66) 212 1 1013505 327 28.4 16.5 2.9 chr4 13215928 13216170 (177938106) + MamGypLTR1b LTR/Gypsy 19 294 (490) 1013719 439 23.1 7.4 0.8 chr4 13217094 13217215 (177937061) + MamGypLTR1b LTR/Gypsy 653 782 (0) 1013719 300 18.6 3.4 0.0 chr4 13256639 13256697 (177897579) + MamGypLTR2c LTR/Gypsy 1 61 (1007) 1013779 242 31.1 3.2 3.2 chr4 13354984 13355106 (177799170) + MamGypLTR1c LTR/Gypsy 453 575 (228) 1013936 315 29.5 10.2 8.1 chr4 13808448 13808742 (177345534) C MamGypLTR2c LTR/Gypsy (29) 1039 739 1014599 457 26.6 5.1 1.9 chr4 13808836 13808992 (177345284) C MamGypLTR2c LTR/Gypsy (880) 188 27 1014599 362 37.0 0.8 0.0 chr4 13985149 13985275 (177169001) C MamGypLTR3 LTR/Gypsy (320) 519 392 1014937 483 25.1 7.2 5.5 chr4 15346675 15346855 (175807421) C MamGypLTR1b LTR/Gypsy (0) 782 599 1017152 410 27.3 11.3 1.6 chr4 15347120 15347305 (175806971) C MamGypLTR1b LTR/Gypsy (579) 205 2 1017152 501 32.3 5.6 1.7 chr4 15462941 15463173 (175691103) + MamGypLTR3 LTR/Gypsy 594 835 (4) 1017367 314 24.9 0.9 9.3 chr4 15898368 15898540 (175255736) C LTR81AB LTR/Gypsy (1046) 304 151 1018101 240 29.3 8.1 8.6 chr4 16241509 16241706 (174912570) C MamGypLTR1c LTR/Gypsy (272) 531 335 1018646 225 31.2 3.2 8.4 chr4 16241770 16241923 (174912353) C MamGypLTR1c LTR/Gypsy (657) 146 1 1018646 231 32.2 4.4 0.0 chr4 16402739 16402828 (174751448) C MamGypLTR1b LTR/Gypsy (3) 779 686 1018908 241 23.3 9.5 4.8 chr4 17222842 17222967 (173931309) + MamGypLTR3 LTR/Gypsy 658 789 (50) 1020344 249 21.2 12.1 0.0 chr4 17347100 17347165 (173807111) + MamGypLTR1b LTR/Gypsy 709 782 (0) 1020571 244 21.1 5.3 0.0 chr4 17347868 17347923 (173806353) C MamGypLTR1b LTR/Gypsy (75) 709 651 1020574 282 29.5 5.3 0.9 chr4 17348433 17348540 (173805736) C MamGypLTR1b LTR/Gypsy (199) 583 471 1020574 296 29.9 14.2 5.9 chr4 17349002 17349429 (173804847) C MamGypLTR1b LTR/Gypsy (307) 475 1 1020574 283 24.3 0.1 4.9 chr4 17532700 17532792 (173621484) C LTR81 LTR/Gypsy (7) 1182 1058 1020950 244 22.4 13.4 0.0 chr4 17547238 17547304 (173606972) C MamGypLTR1c LTR/Gypsy (657) 146 71 1020983 226 28.2 5.1 0.0 chr4 18182104 18182181 (172972095) + LTR81C LTR/Gypsy 865 946 (207) 1022044 529 27.8 5.4 2.7 chr4 18191997 18192218 (172962058) C MamGypLTR2c LTR/Gypsy (37) 1031 804 1022066 282 32.1 6.0 0.0 chr4 18717338 18717452 (172436824) + LTR81C LTR/Gypsy 575 653 (500) 1022881 277 32.4 6.7 5.7 chr4 19419081 19419273 (171735003) + MamGypLTR2c LTR/Gypsy 311 505 (563) 1023979 353 26.6 1.7 1.7 chr4 19901720 19901834 (171252442) C LTR81A LTR/Gypsy (1215) 135 21 1024713 634 31.6 4.3 1.4 chr4 20166808 20167068 (170987208) + MamGypLTR1a LTR/Gypsy 530 803 (0) 1025094 667 32.9 9.8 2.8 chr4 20346735 20347059 (170807217) C MamGypLTR1b LTR/Gypsy (65) 717 370 1025367 239 30.5 11.6 14.5 chr4 20370498 20370986 (170783290) C LTR81A LTR/Gypsy (240) 1110 707 1025401 239 36.2 14.8 2.7 chr4 20371184 20371346 (170782930) C LTR81A LTR/Gypsy (512) 838 656 1025401 603 26.2 12.5 4.8 chr4 20371566 20371587 (170782689) C LTR81A LTR/Gypsy (986) 364 344 1025403 603 26.2 12.5 4.8 chr4 20371768 20372016 (170782260) C LTR81A LTR/Gypsy (1007) 343 72 1025403 332 34.4 7.1 2.2 chr4 21120445 21120712 (170033564) + MamGypLTR2b LTR/Gypsy 599 879 (43) 1026483 447 38.6 6.7 4.3 chr4 21424497 21424823 (169729453) + LTR81C LTR/Gypsy 579 913 (240) 1026995 372 32.5 8.9 5.1 chr4 21767583 21767796 (169386480) + MamGypLTR3 LTR/Gypsy 548 769 (70) 1027546 585 30.9 11.5 4.1 chr4 21814225 21814538 (169339738) C MamGypLTR1a LTR/Gypsy (10) 774 438 1027621 291 36.6 8.1 3.4 chr4 22030372 22030606 (169123670) C LTR81C LTR/Gypsy (851) 302 57 1027944 350 36.2 8.7 7.4 chr4 22691169 22691652 (168462624) + MamGypLTR1a LTR/Gypsy 288 777 (7) 1028881 228 35.6 3.8 0.0 chr4 22912379 22912510 (168241766) + MamGypLTR2c LTR/Gypsy 434 570 (498) 1029233 232 34.9 4.6 0.8 chr4 22912493 22912622 (168241654) + LTR81C LTR/Gypsy 578 712 (441) 1029234 239 30.8 4.1 7.1 chr4 22987384 22987481 (168166795) C MamGypLTR1d LTR/Gypsy (108) 705 611 1029357 409 21.4 5.3 1.8 chr4 23023528 23023641 (168130635) + MamGypLTR1d LTR/Gypsy 73 190 (623) 1029412 280 34.7 9.9 1.2 chr4 23023737 23023908 (168130368) + MamGypLTR1a LTR/Gypsy 393 579 (205) 1029413 301 27.3 1.4 7.7 chr4 23153885 23154027 (168000249) C MamGypLTR2c LTR/Gypsy (0) 1068 935 1029638 274 34.5 1.0 0.0 chr4 23199785 23199904 (167954372) + LTR81C LTR/Gypsy 124 247 (942) 1029702 326 32.7 4.7 8.3 chr4 23460462 23460761 (167693515) C MamGypLTR1b LTR/Gypsy (57) 725 437 1030054 240 31.0 2.4 14.8 chr4 23935969 23936305 (167217971) + MamGypLTR3 LTR/Gypsy 545 839 (0) 1030706 677 24.0 16.7 4.4 chr4 24990571 24991035 (166163241) + LTR81AB LTR/Gypsy 109 664 (729) 1032478 232 24.8 17.6 4.6 chr4 24991094 24991224 (166163052) + LTR81C LTR/Gypsy 565 712 (477) 1032479 757 30.7 11.2 3.8 chr4 24991386 24991778 (166162498) + LTR81C LTR/Gypsy 716 1137 (16) 1032479 332 27.1 11.5 6.2 chr4 25731881 25732124 (165422152) C LTR81B LTR/Gypsy (1) 1392 1136 1033995 409 16.2 1.2 1.2 chr4 25732722 25732802 (165421474) C LTR81AB LTR/Gypsy (197) 81 1 1033997 356 28.4 5.4 8.5 chr4 25752648 25752905 (165401371) + MamGypLTR1a LTR/Gypsy 14 263 (521) 1034048 274 26.1 6.6 5.4 chr4 26030981 26031146 (165123130) C LTR81B LTR/Gypsy (13) 1380 1213 1034585 292 30.4 3.3 2.6 chr4 26031980 26032131 (165122145) C LTR81B LTR/Gypsy (1121) 272 120 1034585 579 22.8 7.0 3.5 chr4 26083256 26083455 (165070821) + MamGypLTR2b LTR/Gypsy 673 879 (43) 1034678 257 26.3 2.0 6.9 chr4 26136399 26136500 (165017776) + MamGypLTR3 LTR/Gypsy 323 419 (420) 1034777 449 21.1 16.2 4.5 chr4 27064415 27064593 (164089683) + MamGypLTR2c LTR/Gypsy 854 1053 (15) 1036327 403 21.7 0.0 0.0 chr4 27246443 27246525 (163907751) C MamGypLTR1b LTR/Gypsy (0) 782 700 1036616 318 27.0 9.1 4.1 chr4 27348674 27348870 (163805406) C MamGypLTR2c LTR/Gypsy (64) 1004 809 1036768 308 20.3 5.8 0.0 chr4 27738935 27739003 (163415273) + LTR81C LTR/Gypsy 1049 1121 (32) 1037319 297 26.3 0.0 1.3 chr4 27910480 27910556 (163243720) C MamGypLTR2c LTR/Gypsy (75) 993 918 1037567 234 28.9 2.9 4.9 chr4 28247888 28247989 (162906287) C MamGypLTR1b LTR/Gypsy (549) 233 134 1038016 242 34.3 7.9 0.0 chr4 29172805 29172944 (161981332) + MamGypLTR1d LTR/Gypsy 587 737 (76) 1039343 368 20.0 5.9 2.0 chr4 29377155 29377256 (161777020) C MamGypLTR1a LTR/Gypsy (678) 106 1 1039634 371 26.8 16.2 6.8 chr4 30021285 30021636 (161132640) C LTR81B LTR/Gypsy (0) 1393 1009 1040536 349 28.7 0.0 6.5 chr4 30023131 30023283 (161130993) C LTR81B LTR/Gypsy (1116) 277 135 1040536 226 26.7 3.2 6.5 chr4 30476358 30476481 (160677795) C LTR81B LTR/Gypsy (1264) 129 10 1041155 293 32.6 5.3 4.6 chr4 31268280 31268430 (159885846) C LTR81C LTR/Gypsy (235) 918 767 1042236 319 39.0 6.8 6.3 chr4 31910882 31911472 (159242804) + MamGypLTR3 LTR/Gypsy 185 778 (61) 1043142 227 24.4 3.5 8.2 chr4 33323326 33323410 (157830866) + LTR81A LTR/Gypsy 82 162 (1188) 1045158 239 40.9 5.4 1.6 chr4 33756970 33757153 (157397123) + MamGypLTR1b LTR/Gypsy 374 564 (218) 1045747 337 33.3 0.8 0.0 chr4 34179692 34179808 (156974468) C MamGyp-int LTR/Gypsy (638) 4424 4307 1046335 420 36.8 4.1 0.0 chr4 34179876 34180046 (156974230) C MamGyp-int LTR/Gypsy (875) 4187 4010 1046335 243 30.5 14.9 1.9 chr4 34490028 34490134 (156664142) C MamGypLTR2c LTR/Gypsy (729) 339 219 1046759 417 39.2 10.1 1.5 chr4 34862242 34862578 (156291698) + MamGypLTR1a LTR/Gypsy 341 706 (78) 1047316 238 33.6 3.7 8.7 chr4 35084184 35084424 (156069852) + MamGypLTR2c LTR/Gypsy 22 250 (818) 1047615 361 35.5 9.1 3.3 chr4 35084502 35084862 (156069414) + MamGypLTR2c LTR/Gypsy 382 763 (305) 1047615 297 24.7 2.6 0.0 chr4 35084935 35085011 (156069265) + MamGypLTR2c LTR/Gypsy 886 964 (104) 1047615 320 32.6 6.6 4.4 chr4 35952672 35952854 (155201422) + MamGypLTR1a LTR/Gypsy 415 601 (183) 1048766 325 28.8 16.8 4.8 chr4 35978636 35978720 (155175556) C MamGypLTR3 LTR/Gypsy (34) 805 724 1048804 325 28.8 16.8 4.8 chr4 35979211 35979332 (155174944) C MamGypLTR3 LTR/Gypsy (116) 723 573 1048804 282 32.5 3.4 1.7 chr4 36495346 36495464 (154658812) C LTR81C LTR/Gypsy (826) 327 207 1049515 400 27.4 6.1 2.8 chr4 36495667 36495873 (154658403) C LTR81AB LTR/Gypsy (1074) 319 109 1049516 249 35.1 8.8 0.0 chr4 36520206 36520353 (154633923) + LTR81 LTR/Gypsy 412 572 (617) 1049542 249 29.7 3.5 2.6 chr4 36520825 36520938 (154633338) + MamGypLTR2c LTR/Gypsy 863 977 (91) 1049543 312 20.4 1.1 5.4 chr4 36839822 36839914 (154314362) + MamGypLTR2b LTR/Gypsy 799 887 (35) 1049979 248 33.3 7.8 3.5 chr4 37097247 37097476 (154056800) + MamGypLTR2c LTR/Gypsy 33 272 (796) 1050331 269 32.6 3.1 2.1 chr4 37097662 37097758 (154056518) + MamGypLTR1c LTR/Gypsy 397 494 (309) 1050332 237 24.4 7.3 0.0 chr4 37809461 37809542 (153344734) + LTR81 LTR/Gypsy 1099 1186 (3) 1051388 233 23.4 13.2 7.2 chr4 37975104 37975186 (153179090) C MamGypLTR2b LTR/Gypsy (162) 760 673 1051679 288 25.0 11.2 7.1 chr4 38286367 38286565 (152867711) C LTR81B LTR/Gypsy (43) 1307 963 1052174 658 27.6 8.4 1.9 chr4 38286696 38286909 (152867367) C LTR81B LTR/Gypsy (393) 1000 773 1052174 543 23.0 22.4 0.5 chr4 38287221 38287421 (152866855) C LTR81B LTR/Gypsy (1063) 330 86 1052174 535 26.4 24.6 1.4 chr4 38373217 38373497 (152780779) + LTR81 LTR/Gypsy 835 1180 (9) 1052308 247 26.6 6.2 2.1 chr4 38828183 38828278 (152325998) C LTR81A LTR/Gypsy (0) 1350 1251 1053092 521 28.1 7.1 1.2 chr4 38828370 38828538 (152325738) + LTR81C LTR/Gypsy 836 1014 (139) 1053093 244 22.4 1.7 0.0 chr4 38992306 38992363 (152161913) + LTR81B LTR/Gypsy 1206 1264 (129) 1053366 823 26.9 13.2 4.2 chr4 40401434 40401841 (150752435) + LTR81B LTR/Gypsy 28 472 (921) 1056452 483 32.4 7.9 6.8 chr4 40413679 40414046 (150740230) C LTR81C LTR/Gypsy (28) 1125 754 1056472 286 26.5 0.0 1.4 chr4 40415254 40415322 (150738954) C LTR81C LTR/Gypsy (1100) 250 183 1056472 709 28.1 7.8 11.3 chr4 41328037 41328498 (149825778) C MamGypLTR1d LTR/Gypsy (309) 504 53 1058326 709 28.1 7.8 11.3 chr4 41329092 41329150 (149825126) C MamGypLTR1d LTR/Gypsy (761) 52 1 1058326 276 24.0 7.1 3.0 chr4 41339699 41339797 (149814479) C MamGypLTR1d LTR/Gypsy (7) 806 704 1058350 447 31.3 7.9 5.7 chr4 41436366 41436543 (149717733) + LTR81B LTR/Gypsy 950 1121 (272) 1058516 447 31.3 7.9 5.7 chr4 41436834 41436972 (149717304) + LTR81B LTR/Gypsy 1122 1274 (119) 1058516 225 9.1 0.0 0.0 chr4 41437576 41437608 (149716668) + LTR81C LTR/Gypsy 1094 1126 (27) 1058520 306 25.0 5.2 0.0 chr4 42282508 42282603 (148871673) + MamGypLTR1d LTR/Gypsy 652 752 (61) 1059812 665 23.1 17.4 6.1 chr4 42296311 42296637 (148857639) + LTR81A LTR/Gypsy 1 364 (986) 1059825 241 30.8 2.8 11.2 chr4 42296769 42296947 (148857329) + MamGypLTR2c LTR/Gypsy 305 468 (600) 1059826 560 28.4 11.4 9.3 chr4 42297029 42297266 (148857010) + LTR81A LTR/Gypsy 681 928 (225) 1059825 560 28.4 11.4 9.3 chr4 42297575 42297766 (148856510) + LTR81A LTR/Gypsy 929 1120 (33) 1059825 234 24.3 2.7 0.0 chr4 42357776 42357849 (148796427) + MamGypLTR1b LTR/Gypsy 657 732 (50) 1059929 888 27.6 7.3 3.9 chr4 42388152 42388395 (148765881) + LTR81A LTR/Gypsy 65 321 (1029) 1059985 760 27.6 7.3 3.9 chr4 42388675 42388787 (148765489) + LTR81A LTR/Gypsy 322 433 (917) 1059985 260 19.6 5.4 0.0 chr4 42711833 42711888 (148442388) + MamGypLTR3 LTR/Gypsy 781 839 (0) 1060358 495 26.6 6.7 4.0 chr4 43031396 43031618 (148122658) C LTR81B LTR/Gypsy (1164) 229 1 1060806 383 31.8 16.2 6.1 chr4 43043894 43044171 (148110105) + MamGypLTR3 LTR/Gypsy 487 792 (47) 1060822 266 26.6 13.8 4.1 chr4 43074205 43074349 (148079927) C MamGypLTR1a LTR/Gypsy (5) 779 621 1060860 338 37.4 8.8 1.7 chr4 43126349 43126713 (148027563) C LTR81 LTR/Gypsy (447) 903 511 1060923 252 35.9 7.3 3.7 chr4 43330127 43330317 (147823959) + MamGypLTR1c LTR/Gypsy 528 725 (78) 1061201 433 28.4 9.7 3.4 chr4 43771975 43772150 (147382126) + LTR81A LTR/Gypsy 38 223 (1170) 1061803 356 26.2 2.7 1.4 chr4 44068336 44068482 (147085794) + MamGypLTR2b LTR/Gypsy 722 870 (52) 1062195 331 31.1 4.0 4.9 chr4 45263851 45264073 (145890203) C LTR81A LTR/Gypsy (8) 1342 1122 1063774 237 29.3 3.9 2.9 chr4 45568798 45568899 (145585377) C MamGypLTR1c LTR/Gypsy (688) 115 13 1064190 300 30.3 7.6 1.3 chr4 45931012 45931176 (145223100) + LTR81A LTR/Gypsy 2 172 (1178) 1064639 514 29.4 7.9 11.5 chr4 45950292 45950787 (145203489) C LTR81A LTR/Gypsy (850) 500 23 1064666 286 39.3 0.6 4.5 chr4 46496666 46496822 (144657454) C MamGypLTR2c LTR/Gypsy (571) 497 347 1065440 390 30.9 10.5 3.3 chr4 46788613 46788793 (144365483) + MamGypLTR1a LTR/Gypsy 46 239 (545) 1065828 267 34.0 7.3 5.0 chr4 46788914 46789185 (144365091) + MamGypLTR1a LTR/Gypsy 444 726 (56) 1065828 267 34.0 7.3 5.0 chr4 46789489 46789515 (144364761) + MamGypLTR1a LTR/Gypsy 727 750 (32) 1065828 259 29.3 6.3 2.4 chr4 47227914 47228039 (143926237) C MamGypLTR1a LTR/Gypsy (41) 743 613 1066448 313 27.8 2.3 2.3 chr4 47650775 47650903 (143503373) + MamGypLTR3 LTR/Gypsy 263 391 (448) 1067106 267 27.3 0.0 4.9 chr4 47702672 47702774 (143451502) C MamGypLTR1a LTR/Gypsy (328) 454 352 1067169 276 25.4 5.3 7.6 chr4 47930296 47930427 (143223849) C MamGypLTR1a LTR/Gypsy (0) 803 675 1067496 307 32.3 11.3 3.0 chr4 47932020 47932249 (143222027) C MamGypLTR1a LTR/Gypsy (124) 660 412 1067496 346 27.3 3.8 3.2 chr4 48050423 48050624 (143103652) + LTR81C LTR/Gypsy 980 1186 (3) 1067726 246 33.0 1.1 2.1 chr4 48077255 48077347 (143076929) + MamGypLTR1d LTR/Gypsy 358 449 (364) 1067755 238 34.8 4.8 2.6 chr4 48077791 48078017 (143076259) + MamGypLTR1d LTR/Gypsy 561 792 (11) 1067755 465 28.1 0.0 1.4 chr4 48159167 48159314 (142994962) C MamGypLTR1b LTR/Gypsy (4) 778 633 1067894 261 33.9 2.4 2.4 chr4 48296797 48296920 (142857356) + MamGypLTR1a LTR/Gypsy 576 699 (85) 1068141 434 28.5 4.2 3.5 chr4 48328678 48328819 (142825457) + LTR81A LTR/Gypsy 674 816 (534) 1068196 538 30.5 15.5 6.1 chr4 48917447 48917904 (142236372) + MamGypLTR1b LTR/Gypsy 275 775 (7) 1069159 261 25.7 6.6 2.6 chr4 52801165 52801240 (138353036) + LTR81C LTR/Gypsy 254 332 (1061) 1070025 305 32.1 9.7 2.8 chr4 52807273 52807416 (138346860) + LTR81C LTR/Gypsy 317 470 (923) 1070025 575 26.4 9.7 1.1 chr4 52808632 52808807 (138345469) + LTR81C LTR/Gypsy 963 1153 (0) 1070025 486 32.0 4.9 2.2 chr4 52825912 52826087 (138328189) C LTR81B LTR/Gypsy (950) 443 263 1070048 740 30.5 6.2 2.3 chr4 52868892 52869196 (138285080) + MamGypLTR1b LTR/Gypsy 460 776 (6) 1070099 1008 21.7 10.0 1.4 chr4 52881277 52881575 (138272701) + MamGypLTR1c LTR/Gypsy 1 321 (492) 1070121 565 28.5 3.5 0.5 chr4 52881638 52881838 (138272438) + MamGypLTR1c LTR/Gypsy 607 813 (0) 1070121 374 28.4 10.4 7.6 chr4 53124123 53124476 (138029800) C LTR81B LTR/Gypsy (15) 1378 1015 1070455 604 21.7 14.4 2.6 chr4 53125458 53125651 (138028625) C LTR81B LTR/Gypsy (1003) 390 174 1070455 425 30.7 0.0 0.0 chr4 53232547 53232660 (137921616) + MamGypLTR1d LTR/Gypsy 698 811 (2) 1070612 268 22.8 9.2 6.1 chr4 53241042 53241139 (137913137) C MamGypLTR1a LTR/Gypsy (4) 780 680 1070629 318 36.7 2.0 5.0 chr4 53816506 53816703 (137337573) + MamGypLTR2b LTR/Gypsy 33 224 (698) 1071535 254 29.6 7.5 8.1 chr4 53817075 53817247 (137337029) + MamGypLTR1c LTR/Gypsy 632 803 (0) 1071536 376 31.6 12.2 3.7 chr4 55190137 55190487 (135963789) C LTR81A LTR/Gypsy (446) 904 524 1073586 457 29.6 6.9 8.7 chr4 55194362 55194839 (135959437) + LTR81A LTR/Gypsy 4 445 (905) 1073590 640 28.1 7.1 2.3 chr4 55619241 55619506 (135534770) C MamGypLTR1b LTR/Gypsy (41) 741 463 1074271 283 29.2 6.2 6.2 chr4 55619863 55619990 (135534286) C MamGypLTR1b LTR/Gypsy (538) 244 117 1074271 250 34.2 4.2 4.7 chr4 55798300 55798535 (135355741) C LTR81A LTR/Gypsy (397) 953 719 1074544 255 29.5 4.3 2.6 chr4 55801969 55802083 (135352193) C LTR81A LTR/Gypsy (960) 390 274 1074544 242 17.0 3.8 0.0 chr4 55802339 55802391 (135351885) C LTR81A LTR/Gypsy (30) 248 194 1074544 256 32.3 8.8 2.3 chr4 56043017 56043187 (135111089) C LTR81 LTR/Gypsy (6) 1183 1002 1074872 244 29.4 3.1 5.0 chr4 56044569 56044729 (135109547) C LTR81 LTR/Gypsy (1126) 267 110 1074872 749 28.1 3.3 10.7 chr4 56788877 56788967 (134365309) + LTR81B LTR/Gypsy 131 222 (1171) 1076097 749 28.1 3.3 10.7 chr4 56789267 56789340 (134364936) + LTR81B LTR/Gypsy 223 279 (1114) 1076097 749 28.1 3.3 10.7 chr4 56789875 56790073 (134364203) + LTR81B LTR/Gypsy 280 469 (924) 1076097 388 30.6 13.6 2.6 chr4 56790609 56790873 (134363403) + LTR81B LTR/Gypsy 1098 1391 (2) 1076097 1289 32.9 10.2 3.5 chr4 57488954 57489666 (133664610) C MamGypLTR1d LTR/Gypsy (11) 802 42 1077347 302 31.1 2.9 2.9 chr4 57644507 57644645 (133509631) + MamGypLTR2c LTR/Gypsy 11 149 (919) 1077642 265 23.3 37.2 0.0 chr4 57645896 57646024 (133508252) + MamGypLTR2b LTR/Gypsy 677 853 (69) 1077647 426 29.1 3.0 0.0 chr4 58193722 58193855 (132960421) + MamGypLTR1d LTR/Gypsy 674 811 (2) 1078695 593 22.6 13.6 3.3 chr4 58302305 58302546 (132851730) + LTR81B LTR/Gypsy 1085 1351 (42) 1078849 360 35.1 6.1 0.8 chr4 58542992 58543123 (132611153) C MamGypLTR2c LTR/Gypsy (586) 482 344 1079139 236 28.3 3.0 9.8 chr4 58544134 58544266 (132610010) C MamGypLTR2c LTR/Gypsy (923) 145 22 1079139 299 35.6 4.1 3.7 chr4 58696028 58696272 (132458004) + LTR81B LTR/Gypsy 231 476 (917) 1079330 473 26.0 1.3 3.9 chr4 58804644 58804799 (132349477) + LTR81A LTR/Gypsy 18 169 (1181) 1079460 267 20.0 7.2 7.2 chr4 58808229 58808325 (132345951) + LTR81A LTR/Gypsy 259 355 (995) 1079460 240 35.2 11.0 0.0 chr4 58835341 58835485 (132318791) C MamGypLTR1d LTR/Gypsy (11) 802 642 1079514 470 20.2 14.2 0.8 chr4 58836431 58836550 (132317726) C MamGypLTR1d LTR/Gypsy (8) 805 670 1079516 243 36.9 2.9 1.0 chr4 58836678 58836781 (132317495) C MamGypLTR1d LTR/Gypsy (319) 494 389 1079516 265 26.7 2.2 1.1 chr4 59578892 59578982 (131575294) C MamGypLTR2b LTR/Gypsy (72) 850 759 1080491 584 30.8 8.2 5.1 chr4 61316152 61316508 (129837768) C LTR81B LTR/Gypsy (0) 1393 1018 1082696 584 30.8 8.2 5.1 chr4 61317081 61317171 (129837105) C LTR81B LTR/Gypsy (376) 1017 931 1082696 384 33.5 7.5 1.4 chr4 61534133 61534344 (129619932) + MamGypLTR2c LTR/Gypsy 829 1053 (15) 1082945 409 30.0 7.0 8.6 chr4 61827832 61828217 (129326059) C LTR81B LTR/Gypsy (43) 1350 971 1083309 239 30.6 7.3 5.1 chr4 61828947 61829180 (129325096) C LTR81B LTR/Gypsy (1146) 247 9 1083309 255 34.3 5.4 7.4 chr4 63105141 63105288 (128048988) + MamGypLTR2b LTR/Gypsy 142 286 (636) 1085093 251 33.3 2.5 1.7 chr4 63231025 63231143 (127923133) + LTR81 LTR/Gypsy 116 235 (954) 1085256 437 25.6 7.0 3.2 chr4 63275395 63275580 (127878696) + LTR81B LTR/Gypsy 97 289 (1104) 1085317 539 34.3 2.5 2.9 chr4 63370361 63370636 (127783640) C MamGypLTR1c LTR/Gypsy (0) 803 529 1085448 267 37.5 4.4 0.0 chr4 63370884 63371019 (127783257) C MamGypLTR1c LTR/Gypsy (309) 504 363 1085448 693 39.6 6.5 3.2 chr4 63805706 63806595 (127347681) C LTR81B LTR/Gypsy (18) 1375 452 1086030 693 39.6 6.5 3.2 chr4 63807564 63807606 (127346670) C LTR81B LTR/Gypsy (942) 451 412 1086030 259 28.9 4.9 6.0 chr4 66964801 66964984 (124189292) C MamGypLTR2c LTR/Gypsy (48) 1020 839 1090076 410 34.6 3.2 2.5 chr4 67107080 67107236 (124047040) + MamGypLTR3 LTR/Gypsy 621 778 (61) 1090270 265 20.3 3.1 1.5 chr4 68621485 68621549 (122532727) + MamGypLTR2c LTR/Gypsy 999 1064 (4) 1092290 540 34.0 14.1 4.9 chr4 68672111 68672867 (122481409) + MamGypLTR2b LTR/Gypsy 12 838 (84) 1092378 366 28.9 5.3 4.9 chr4 68933474 68933755 (122220521) + MamGypLTR3 LTR/Gypsy 103 420 (419) 1092712 889 27.9 9.5 8.4 chr4 69016180 69016703 (122137573) C LTR81B LTR/Gypsy (863) 530 1 1092820 286 30.2 7.8 0.3 chr4 72891772 72891922 (118262354) C LTR81 LTR/Gypsy (2) 1348 1098 1097983 542 35.1 12.6 2.0 chr4 72892072 72892373 (118261903) C LTR81 LTR/Gypsy (447) 742 409 1097983 457 30.6 7.0 8.2 chr4 73271113 73271514 (117882762) + LTR81B LTR/Gypsy 131 527 (866) 1098477 229 30.4 1.3 0.0 chr4 73444496 73444574 (117709702) + MamGypLTR1b LTR/Gypsy 360 439 (345) 1098693 311 27.8 6.0 0.9 chr4 73444670 73444785 (117709491) + MamGypLTR1b LTR/Gypsy 628 749 (33) 1098693 610 31.1 7.8 5.8 chr4 73850606 73851001 (117303275) C LTR81A LTR/Gypsy (142) 1208 805 1099199 303 30.1 4.8 1.0 chr4 73851153 73851256 (117303020) C LTR81A LTR/Gypsy (821) 332 225 1099199 736 30.0 8.3 1.8 chr4 74215241 74215576 (116938700) + LTR81B LTR/Gypsy 173 530 (863) 1099787 279 30.8 11.4 7.4 chr4 74215879 74216176 (116938100) + LTR81B LTR/Gypsy 830 1139 (14) 1099787 469 26.4 15.0 2.1 chr4 74242236 74242475 (116911801) C LTR81B LTR/Gypsy (1085) 308 38 1099814 263 27.8 17.7 3.5 chr4 74250801 74250998 (116903278) C MamGypLTR1c LTR/Gypsy (50) 753 528 1099826 230 33.3 9.6 5.3 chr4 74253303 74253511 (116900765) C MamGypLTR1c LTR/Gypsy (487) 316 99 1099826 252 30.8 9.0 7.7 chr4 74520799 74520953 (116633323) + MamGypLTR1a LTR/Gypsy 215 371 (413) 1100166 422 34.7 4.5 5.6 chr4 74562689 74562891 (116591385) C MamGypLTR1a LTR/Gypsy (0) 782 590 1100213 422 34.7 4.5 5.6 chr4 74562915 74562997 (116591279) C MamGypLTR1a LTR/Gypsy (193) 589 499 1100213 523 35.0 4.4 6.9 chr4 74563056 74563227 (116591049) C MamGypLTR1a LTR/Gypsy (315) 469 301 1100213 523 35.0 4.4 6.9 chr4 74563532 74563748 (116590528) C MamGypLTR1a LTR/Gypsy (484) 300 90 1100213 260 17.6 5.9 0.0 chr4 74691667 74691717 (116462559) + MamGyp-int LTR/Gypsy 4017 4070 (992) 1100394 264 31.2 5.2 1.0 chr4 74779516 74779612 (116374664) C MamGypLTR1d LTR/Gypsy (13) 800 700 1100518 252 22.9 0.0 0.0 chr4 74878089 74878136 (116276140) C MamGypLTR1c LTR/Gypsy (755) 48 1 1100616 575 32.4 9.1 3.2 chr4 74971353 74971693 (116182583) C MamGypLTR1b LTR/Gypsy (61) 721 361 1100721 278 30.9 7.5 4.4 chr4 75132397 75132555 (116021721) C MamGypLTR1d LTR/Gypsy (603) 210 47 1100940 497 32.9 4.9 2.2 chr4 75510092 75510315 (115643961) + MamGypLTR1a LTR/Gypsy 6 235 (549) 1101456 343 33.3 16.4 1.3 chr4 75510974 75511204 (115643072) + MamGypLTR1a LTR/Gypsy 497 762 (22) 1101456 491 31.9 5.2 4.6 chr4 75575453 75575758 (115578518) C MamGypLTR2c LTR/Gypsy (56) 1012 705 1101552 298 33.8 1.2 7.7 chr4 75772546 75772715 (115381561) + MamGypLTR3 LTR/Gypsy 547 705 (134) 1101827 459 32.7 11.3 5.4 chr4 75810228 75810481 (115343795) C MamGypLTR2c LTR/Gypsy (55) 1013 750 1101882 459 32.7 11.3 5.4 chr4 75810921 75811143 (115343133) C MamGypLTR2c LTR/Gypsy (319) 749 508 1101882 230 39.2 7.8 0.0 chr4 75811172 75811324 (115342952) C MamGypLTR2c LTR/Gypsy (610) 458 294 1101882 324 32.8 11.3 6.0 chr4 75844834 75845248 (115309028) + MamGypLTR1d LTR/Gypsy 325 761 (52) 1101919 837 32.5 8.8 2.4 chr4 76130980 76131445 (115022831) + MamGypLTR1c LTR/Gypsy 1 496 (307) 1102267 389 27.6 6.3 2.4 chr4 76131998 76132123 (115022153) + MamGypLTR1c LTR/Gypsy 526 656 (147) 1102267 243 24.9 7.8 14.5 chr4 76988759 76988951 (114165325) C MamGypLTR2c LTR/Gypsy (36) 1032 853 1103666 502 25.7 4.8 2.5 chr4 77449285 77449484 (113704792) C MamGypLTR2c LTR/Gypsy (0) 1068 697 1104418 256 23.1 0.0 14.9 chr4 77449633 77449689 (113704587) C MamGypLTR2c LTR/Gypsy (162) 906 856 1104418 256 23.1 0.0 14.9 chr4 77450007 77450055 (113704221) C MamGypLTR2c LTR/Gypsy (213) 855 816 1104418 369 25.8 6.4 7.6 chr4 77450382 77450471 (113703805) C MamGypLTR2c LTR/Gypsy (610) 458 375 1104418 369 24.8 14.8 10.2 chr4 77450778 77450989 (113703287) C MamGypLTR2c LTR/Gypsy (694) 374 2 1104418 233 37.9 5.8 3.7 chr4 77495274 77495462 (113658814) C LTR81B LTR/Gypsy (940) 453 261 1104505 341 32.3 5.2 3.6 chr4 77602555 77602747 (113551529) C MamGypLTR1c LTR/Gypsy (7) 796 601 1104686 307 32.0 3.0 3.0 chr4 77719620 77719751 (113434525) C MamGypLTR1d LTR/Gypsy (244) 569 438 1104855 354 31.1 5.5 0.6 chr4 79094184 79094364 (112059912) C MamGypLTR1d LTR/Gypsy (7) 806 617 1106749 286 22.8 14.8 6.5 chr4 79241640 79241794 (111912482) C MamGypLTR1a LTR/Gypsy (589) 195 28 1106949 546 26.7 8.4 4.4 chr4 79601310 79601560 (111552716) + MamGypLTR1a LTR/Gypsy 1 261 (523) 1107478 286 38.4 3.2 6.1 chr4 79880183 79880429 (111273847) C MamGypLTR1c LTR/Gypsy (250) 553 314 1107928 387 31.8 10.6 6.9 chr4 80239057 80239330 (110914946) + LTR81A LTR/Gypsy 954 1237 (113) 1108377 301 26.6 7.7 3.3 chr4 81018503 81018685 (110135591) C MamGypLTR1d LTR/Gypsy (11) 802 612 1109305 226 17.9 16.2 1.5 chr4 81018824 81018891 (110135385) C MamGypLTR1c LTR/Gypsy (722) 81 4 1109306 417 32.3 11.0 1.8 chr4 81050875 81051202 (110103074) C MamGypLTR2c LTR/Gypsy (27) 1041 684 1109353 924 32.3 10.9 3.1 chr4 81051280 81051729 (110102547) C MamGypLTR2c LTR/Gypsy (582) 486 2 1109353 268 30.5 6.1 4.0 chr4 81066680 81066877 (110087399) + LTR81C LTR/Gypsy 868 1069 (84) 1109373 439 29.7 6.3 6.8 chr4 81158542 81158667 (109995609) C LTR81B LTR/Gypsy (1042) 351 228 1109493 439 29.7 6.3 6.8 chr4 81158874 81158944 (109995332) C LTR81B LTR/Gypsy (1166) 227 158 1109493 439 29.7 6.3 6.8 chr4 81159463 81159614 (109994662) C LTR81B LTR/Gypsy (1236) 157 3 1109493 543 28.3 4.8 0.9 chr4 81159657 81159884 (109994392) + MamGypLTR1d LTR/Gypsy 1 237 (576) 1109496 651 36.4 8.5 1.2 chr4 81525385 81525796 (109628480) + MamGypLTR2c LTR/Gypsy 44 485 (583) 1109937 601 25.4 7.4 4.7 chr4 81526070 81526284 (109627992) + MamGypLTR2c LTR/Gypsy 841 1061 (7) 1109938 510 31.5 9.9 6.4 chr4 81601779 81602171 (109552105) + LTR81B LTR/Gypsy 140 546 (847) 1110034 336 28.8 25.4 2.6 chr4 81998704 81999043 (109155233) + LTR81A LTR/Gypsy 7 424 (926) 1110567 282 22.2 12.5 9.2 chr4 82224370 82224553 (108929723) C MamGypLTR2b LTR/Gypsy (63) 859 670 1110860 332 27.9 5.0 0.4 chr4 82225032 82225160 (108929116) + MamGypLTR2b LTR/Gypsy 820 1063 (5) 1110861 546 29.5 2.7 6.5 chr4 82233680 82233940 (108920336) + MamGypLTR3 LTR/Gypsy 573 823 (16) 1110873 358 26.0 18.2 1.5 chr4 82439435 82439637 (108714639) C MamGypLTR1b LTR/Gypsy (545) 237 1 1111162 228 20.9 4.5 0.0 chr4 83204280 83204346 (107949930) + MamGypLTR2b LTR/Gypsy 757 826 (96) 1112284 449 28.4 10.0 7.5 chr4 84150689 84151084 (107003192) C LTR81C LTR/Gypsy (46) 1107 651 1113987 291 27.1 10.2 5.8 chr4 84273144 84273280 (106880996) + MamGypLTR1c LTR/Gypsy 49 191 (612) 1114216 380 30.2 1.6 2.5 chr4 84370443 84370564 (106783712) + LTR81 LTR/Gypsy 817 937 (252) 1114410 430 30.2 6.3 5.1 chr4 86257928 86258262 (104896014) C LTR81B LTR/Gypsy (1054) 339 1 1117194 302 31.9 11.8 4.9 chr4 86342211 86342497 (104811779) + MamGypLTR2c LTR/Gypsy 639 945 (123) 1117312 307 32.3 14.4 3.0 chr4 86708950 86709150 (104445126) + MamGypLTR2c LTR/Gypsy 258 481 (587) 1117797 237 24.6 6.2 0.0 chr4 86709438 86709502 (104444774) + MamGypLTR1a LTR/Gypsy 716 784 (0) 1117798 521 33.8 10.7 3.7 chr4 86728602 86729019 (104425257) C MamGypLTR1b LTR/Gypsy (58) 726 279 1117819 401 32.6 6.3 4.0 chr4 86891740 86891979 (104262297) C MamGypLTR1b LTR/Gypsy (257) 546 308 1118056 257 37.3 5.0 2.2 chr4 87258587 87258767 (103895509) + MamGypLTR3 LTR/Gypsy 177 362 (477) 1118495 349 34.7 6.7 3.6 chr4 87773393 87773616 (103380660) + MamGypLTR3 LTR/Gypsy 599 829 (10) 1119262 230 20.8 6.6 5.3 chr4 88191301 88191376 (102962900) C MamGypLTR1a LTR/Gypsy (663) 121 45 1119991 494 29.2 7.0 3.1 chr4 88336117 88336374 (102817902) + LTR81A LTR/Gypsy 172 439 (911) 1120246 407 33.3 12.7 2.6 chr4 88625176 88625514 (102528762) C MamGypLTR1a LTR/Gypsy (2) 782 410 1120704 299 29.3 18.5 7.2 chr4 88625577 88625841 (102528435) C MamGypLTR1a LTR/Gypsy (502) 311 17 1120704 392 30.7 1.5 2.3 chr4 88656254 88656383 (102497893) C MamGypLTR1c LTR/Gypsy (223) 580 452 1120746 438 29.0 2.0 5.1 chr4 88744707 88744902 (102409374) C LTR81A LTR/Gypsy (1127) 223 34 1120844 443 26.8 17.9 3.0 chr4 88764702 88764963 (102389313) C LTR81 LTR/Gypsy (0) 1189 889 1120864 256 33.1 4.0 8.6 chr4 88807094 88807245 (102347031) + MamGypLTR2c LTR/Gypsy 260 404 (664) 1120930 234 22.6 1.9 0.0 chr4 88860939 88860991 (102293285) + MamGypLTR1b LTR/Gypsy 514 567 (215) 1121009 249 23.4 0.0 4.5 chr4 89327173 89327239 (101827037) C LTR81B LTR/Gypsy (124) 1269 1206 1121853 661 24.2 10.4 1.7 chr4 89975015 89975245 (101179031) + LTR81C LTR/Gypsy 873 1123 (30) 1122809 243 24.3 0.0 10.3 chr4 90044381 90044458 (101109818) C LTR81AB LTR/Gypsy (105) 173 104 1122903 494 30.1 7.3 7.3 chr4 90048848 90049230 (101105046) C LTR81B LTR/Gypsy (3) 1390 1008 1122911 590 35.3 11.2 5.0 chr4 90116493 90117029 (101037247) + MamGypLTR1a LTR/Gypsy 151 720 (64) 1123023 251 23.8 1.5 3.1 chr4 90135105 90135169 (101019107) C MamGypLTR1b LTR/Gypsy (66) 716 653 1123050 268 37.9 1.0 0.0 chr4 90135324 90135426 (101018850) C MamGypLTR1a LTR/Gypsy (343) 441 338 1123051 336 28.7 2.4 9.3 chr4 90135491 90135736 (101018540) C MamGypLTR1a LTR/Gypsy (479) 305 77 1123051 794 37.0 7.4 0.9 chr4 90149527 90149987 (101004289) + MamGyp-int LTR/Gypsy 1790 2280 (2782) 1123073 362 29.7 18.4 3.2 chr4 90252801 90253082 (100901194) C LTR81A LTR/Gypsy (30) 1038 714 1123236 543 30.7 1.6 10.0 chr4 90255639 90255998 (100898278) C LTR81A LTR/Gypsy (1033) 317 3 1123236 323 28.9 3.2 2.9 chr4 90359071 90359255 (100795021) + LTR81C LTR/Gypsy 128 317 (1033) 1123380 450 26.4 7.3 1.6 chr4 90359928 90360119 (100794157) + LTR81C LTR/Gypsy 894 1096 (57) 1123380 858 37.1 9.1 2.0 chr4 90388297 90388893 (100765383) C LTR81C LTR/Gypsy (158) 995 357 1123424 540 33.2 8.3 5.4 chr4 90995811 90996253 (100158023) C MamGypLTR1c LTR/Gypsy (347) 456 1 1124240 265 23.8 2.4 4.8 chr4 91002403 91002486 (100151790) C LTR81 LTR/Gypsy (6) 1183 1102 1124251 234 29.2 4.3 3.4 chr4 91130340 91130456 (100023820) + MamGypLTR3 LTR/Gypsy 342 459 (380) 1124405 312 36.5 7.8 6.5 chr4 91684582 91685027 (99469249) C MamGypLTR1c LTR/Gypsy (72) 731 264 1125117 301 38.5 8.6 3.7 chr4 91983308 91983842 (99170434) C MamGypLTR3 LTR/Gypsy (95) 744 184 1125508 282 39.1 3.7 0.0 chr4 92111161 92111321 (99042955) C LTR81AB LTR/Gypsy (425) 728 562 1125639 446 26.8 6.9 9.1 chr4 92111526 92111915 (99042361) C LTR81AB LTR/Gypsy (965) 385 7 1125639 244 32.2 4.1 8.8 chr4 92243290 92243483 (98910793) C LTR81 LTR/Gypsy (2) 1187 1003 1125821 234 25.0 0.0 0.0 chr4 93138444 93138487 (98015789) C LTR81C LTR/Gypsy (606) 547 504 1126843 273 35.7 6.3 2.6 chr4 93642900 93643089 (97511187) + MamGypLTR2c LTR/Gypsy 1 197 (871) 1127530 278 33.7 0.0 1.1 chr4 93643184 93643276 (97511000) + MamGypLTR2c LTR/Gypsy 357 448 (620) 1127530 238 26.1 0.0 1.4 chr4 93643717 93643786 (97510490) + MamGypLTR2c LTR/Gypsy 981 1049 (19) 1127530 474 34.8 11.6 4.8 chr4 94071744 94071995 (97082281) C LTR81A LTR/Gypsy (368) 982 717 1128144 474 34.8 11.6 4.8 chr4 94072302 94072507 (97081769) C LTR81A LTR/Gypsy (634) 716 493 1128144 233 30.1 6.6 10.4 chr4 94683598 94683838 (96470438) + LTR81B LTR/Gypsy 294 525 (868) 1128968 769 27.0 11.0 3.8 chr4 94684205 94684619 (96469657) + LTR81B LTR/Gypsy 742 1393 (0) 1128968 973 30.8 10.1 6.5 chr4 94718724 94719021 (96435255) + MamGypLTR1a LTR/Gypsy 1 300 (484) 1129014 973 30.8 10.1 6.5 chr4 94719332 94719679 (96434597) + MamGypLTR1a LTR/Gypsy 301 670 (114) 1129014 531 30.4 9.5 4.6 chr4 94882307 94882610 (96271666) + MamGypLTR3 LTR/Gypsy 471 789 (50) 1129209 344 21.7 2.9 0.0 chr4 95026866 95026934 (96127342) + MamGyp-int LTR/Gypsy 3883 3953 (1109) 1129402 434 28.5 4.2 11.6 chr4 95265478 95265838 (95888438) C MamGypLTR1c LTR/Gypsy (198) 605 272 1129763 393 24.2 4.2 0.0 chr4 95266582 95266676 (95887600) C MamGypLTR1c LTR/Gypsy (650) 153 55 1129763 778 33.3 7.3 3.8 chr4 95416814 95417209 (95737067) + MamGypLTR1b LTR/Gypsy 336 745 (37) 1129994 472 26.5 12.4 5.3 chr4 95723802 95724084 (95430192) C LTR81B LTR/Gypsy (6) 1387 1085 1130471 467 29.0 5.0 8.5 chr4 95724793 95725023 (95429253) C LTR81B LTR/Gypsy (1131) 262 39 1130471 467 29.0 5.0 8.5 chr4 95725328 95725355 (95428921) C LTR81B LTR/Gypsy (1355) 38 12 1130471 552 38.0 4.2 3.4 chr4 95840116 95840469 (95313807) C LTR81 LTR/Gypsy (430) 759 403 1130651 388 26.8 15.2 0.6 chr4 95840757 95840921 (95313355) C LTR81 LTR/Gypsy (901) 449 261 1130651 348 35.2 8.4 1.7 chr4 96961424 96961602 (94192674) C MamGypLTR3 LTR/Gypsy (18) 821 631 1132052 235 26.4 2.3 1.1 chr4 97139676 97139763 (94014513) C MamGypLTR1a LTR/Gypsy (0) 784 696 1132313 435 29.5 6.5 6.5 chr4 97490168 97490443 (93663833) C LTR81A LTR/Gypsy (35) 1315 1040 1132750 259 31.7 10.7 11.5 chr4 97877760 97878151 (93276125) + LTR81B LTR/Gypsy 159 547 (846) 1133232 616 28.2 14.6 2.1 chr4 97880022 97880396 (93273880) + LTR81B LTR/Gypsy 937 1386 (7) 1133232 543 33.3 7.1 5.4 chr4 97913451 97913550 (93240726) C LTR81B LTR/Gypsy (5) 1388 1290 1133274 543 33.3 7.1 5.4 chr4 97913593 97913955 (93240321) C LTR81B LTR/Gypsy (104) 1289 918 1133274 292 9.3 0.0 0.0 chr4 97951719 97951761 (93202515) + MamGypLTR1b LTR/Gypsy 1 43 (739) 1133321 309 26.1 0.0 1.4 chr4 97952137 97952206 (93202070) + MamGypLTR1b LTR/Gypsy 516 584 (198) 1133322 253 25.0 9.0 7.3 chr4 98069485 98069661 (93084615) + MamGypLTR1d LTR/Gypsy 17 197 (616) 1133476 429 27.8 5.9 4.9 chr4 98847681 98847884 (92306392) C LTR81A LTR/Gypsy (1125) 225 20 1134453 936 25.1 2.4 6.9 chr4 99138111 99138401 (92015875) + LTR81AB LTR/Gypsy 1 278 (0) 1134819 229 32.8 3.1 6.2 chr4 99138422 99138551 (92015725) + LTR81AB LTR/Gypsy 376 501 (892) 1134819 713 26.7 12.7 1.8 chr4 99139233 99139549 (92014727) + LTR81B LTR/Gypsy 835 1385 (8) 1134821 344 27.4 13.8 2.6 chr4 99888116 99888342 (91265934) + MamGypLTR1c LTR/Gypsy 12 270 (543) 1135982 644 29.6 11.6 7.5 chr4 99888440 99888819 (91265457) + MamGypLTR1c LTR/Gypsy 407 803 (0) 1135982 234 22.9 14.3 0.0 chr4 100303854 100303923 (90850353) C LTR81B LTR/Gypsy (214) 939 860 1136554 544 30.7 11.5 1.1 chr4 100304603 100304888 (90849388) C LTR81B LTR/Gypsy (922) 471 156 1136554 517 31.6 14.3 5.9 chr4 100674040 100674550 (90479726) C LTR81 LTR/Gypsy (236) 1157 604 1136988 447 26.5 7.5 1.6 chr4 100674674 100674861 (90479415) C LTR81 LTR/Gypsy (1091) 302 104 1136988 425 29.3 12.9 2.6 chr4 100757298 100757599 (90396677) C MamGypLTR2b LTR/Gypsy (8) 914 582 1137105 241 19.1 5.0 6.0 chr4 101031660 101031759 (90122517) + MamGypLTR1d LTR/Gypsy 9 107 (706) 1137537 411 22.4 2.9 11.0 chr4 101031926 101032171 (90122105) + MamGypLTR2b LTR/Gypsy 690 915 (7) 1137538 376 29.7 23.9 1.1 chr4 101080629 101080904 (90073372) C LTR81AB LTR/Gypsy (8) 1385 1047 1137614 611 23.8 9.1 3.4 chr4 101081497 101081705 (90072571) C LTR81AB LTR/Gypsy (48) 230 10 1137614 532 31.3 18.2 8.6 chr4 101120531 101121018 (90033258) + MamGypLTR1d LTR/Gypsy 272 805 (8) 1137678 352 21.4 7.0 2.0 chr4 101221193 101221292 (89932984) C MamGypLTR1d LTR/Gypsy (0) 813 709 1137796 790 36.0 14.0 3.7 chr4 101514015 101514691 (89639585) + MamGypLTR1a LTR/Gypsy 30 778 (6) 1138165 235 35.0 14.2 1.2 chr4 101628365 101628610 (89525666) + MamGypLTR3 LTR/Gypsy 541 818 (21) 1138309 732 32.3 10.0 3.6 chr4 101745241 101745712 (89408564) C MamGypLTR1d LTR/Gypsy (311) 502 1 1138461 338 31.9 6.1 2.7 chr4 102869690 102869837 (88284439) C LTR81 LTR/Gypsy (209) 980 828 1139924 282 24.6 12.9 9.3 chr4 103374850 103374966 (87779310) + LTR81B LTR/Gypsy 16 148 (1245) 1140613 282 24.6 12.9 9.3 chr4 103375291 103375365 (87778911) + LTR81B LTR/Gypsy 149 215 (1178) 1140613 344 27.3 23.3 2.2 chr4 103377843 103378022 (87776254) C MamGypLTR1c LTR/Gypsy (57) 746 529 1140618 300 30.2 5.3 4.5 chr4 104278482 104278613 (86875663) + MamGypLTR1d LTR/Gypsy 374 506 (307) 1141853 230 28.9 6.3 4.4 chr4 104346101 104346259 (86808017) + LTR81B LTR/Gypsy 159 320 (1073) 1141953 299 22.8 5.8 2.9 chr4 104353917 104354020 (86800256) C LTR81A LTR/Gypsy (1204) 146 40 1141966 352 31.0 5.3 4.3 chr4 105022973 105023181 (86131095) C LTR81 LTR/Gypsy (389) 800 590 1142751 331 26.0 2.7 6.3 chr4 105131425 105131535 (86022741) C LTR81B LTR/Gypsy (31) 1362 1256 1142889 327 32.5 16.2 3.9 chr4 105549528 105549761 (85604515) + MamGypLTR1c LTR/Gypsy 446 708 (95) 1143385 235 16.5 16.3 7.6 chr4 107515431 107515522 (83638754) C MamGypLTR2b LTR/Gypsy (0) 922 823 1145899 340 31.0 6.2 0.7 chr4 107986683 107986828 (83167448) C MamGypLTR2c LTR/Gypsy (0) 1068 915 1146483 461 27.6 17.6 2.9 chr4 108037349 108037587 (83116689) + MamGypLTR1a LTR/Gypsy 4 277 (507) 1146546 345 37.6 2.0 5.6 chr4 108037620 108037659 (83116617) + MamGypLTR1a LTR/Gypsy 362 401 (383) 1146546 345 37.4 10.4 4.8 chr4 108038030 108038238 (83116038) + MamGypLTR1a LTR/Gypsy 402 630 (152) 1146546 357 34.2 8.7 4.1 chr4 108383322 108383680 (82770596) + LTR81C LTR/Gypsy 129 652 (698) 1146972 229 23.6 5.6 0.0 chr4 108456327 108456398 (82697878) C MamGypLTR1c LTR/Gypsy (28) 775 700 1147064 494 27.4 9.5 6.8 chr4 108456606 108456930 (82697346) C MamGypLTR1c LTR/Gypsy (432) 371 38 1147064 338 24.5 19.4 6.0 chr4 109253605 109253852 (81900424) + LTR81C LTR/Gypsy 873 1153 (0) 1148142 386 22.4 9.1 13.4 chr4 109263566 109263818 (81890458) + LTR81A LTR/Gypsy 1 242 (1108) 1148156 229 14.0 6.9 1.7 chr4 109263840 109263897 (81890379) + MamGypLTR2c LTR/Gypsy 67 127 (941) 1148157 365 28.0 2.5 4.1 chr4 109871195 109871364 (81282912) + MamGypLTR1d LTR/Gypsy 1 168 (645) 1149107 617 27.9 5.3 2.5 chr4 109871377 109871582 (81282694) + MamGypLTR1d LTR/Gypsy 275 507 (306) 1149107 293 33.4 6.8 5.8 chr4 110659030 110659263 (80495013) C MamGypLTR3 LTR/Gypsy (212) 627 391 1150253 293 33.4 6.8 5.8 chr4 110659568 110659640 (80494636) C MamGypLTR3 LTR/Gypsy (449) 390 317 1150253 303 28.1 4.4 1.1 chr4 111169477 111169566 (79984710) C MamGypLTR1d LTR/Gypsy (327) 486 394 1151057 279 34.6 6.0 0.8 chr4 111217800 111217933 (79936343) + MamGypLTR1b LTR/Gypsy 534 674 (108) 1151162 251 24.4 8.0 2.3 chr4 111420172 111420259 (79734017) C LTR81A LTR/Gypsy (1127) 223 131 1151477 267 27.4 2.3 4.5 chr4 111468193 111468280 (79685996) C MamGypLTR2c LTR/Gypsy (672) 396 311 1151551 351 29.0 7.6 4.2 chr4 111468385 111468528 (79685748) C LTR81A LTR/Gypsy (1020) 330 182 1151552 596 31.8 15.6 3.0 chr4 111472742 111473396 (79680880) C LTR81B LTR/Gypsy (12) 1381 423 1151561 357 27.5 8.6 1.7 chr4 111473429 111473602 (79680674) C LTR81B LTR/Gypsy (957) 393 208 1151561 579 35.9 3.9 5.2 chr4 111640310 111640697 (79513579) C LTR81A LTR/Gypsy (203) 1147 765 1151749 1337 29.6 8.1 4.4 chr4 111640735 111641366 (79512910) C LTR81A LTR/Gypsy (695) 655 1 1151749 329 36.2 10.1 5.4 chr4 111706350 111706755 (79447521) C MamGypLTR2b LTR/Gypsy (349) 573 149 1151838 266 31.3 2.0 2.9 chr4 111984481 111984582 (79169694) C MamGypLTR2c LTR/Gypsy (19) 1049 949 1152193 768 38.3 8.4 2.6 chr4 112323750 112324513 (78829763) C LTR81C LTR/Gypsy (201) 952 145 1152567 393 28.3 9.2 5.0 chr4 112727641 112728036 (78426240) C MamGypLTR1c LTR/Gypsy (247) 535 13 1153057 430 32.1 2.9 5.3 chr4 112830330 112830500 (78323776) + MamGypLTR3 LTR/Gypsy 537 703 (136) 1153191 688 30.8 9.8 8.3 chr4 112944887 112945869 (78208407) + MamGypLTR2c LTR/Gypsy 6 989 (79) 1153361 376 29.2 6.2 0.7 chr4 112996295 112996439 (78157837) C MamGypLTR3 LTR/Gypsy (27) 812 660 1153437 264 27.9 2.3 4.7 chr4 113256791 113256918 (77897358) C MamGypLTR2b LTR/Gypsy (20) 902 778 1153826 293 27.7 2.0 2.7 chr4 114766160 114766340 (76387936) + LTR81 LTR/Gypsy 1 190 (999) 1156139 283 28.9 7.0 3.0 chr4 115025746 115025845 (76128431) + LTR81C LTR/Gypsy 133 236 (917) 1156463 376 31.7 14.0 2.2 chr4 115030069 115030355 (76123921) C MamGypLTR1c LTR/Gypsy (1) 802 521 1156469 239 27.1 1.0 2.0 chr4 115189384 115189481 (75964795) + MamGypLTR1c LTR/Gypsy 697 793 (10) 1156657 486 30.5 4.6 3.2 chr4 116349247 116349485 (74804791) + MamGypLTR1c LTR/Gypsy 1 242 (571) 1158093 300 36.5 14.2 3.3 chr4 117231655 117231991 (73922285) + LTR81B LTR/Gypsy 800 1173 (220) 1159208 243 31.8 4.5 0.0 chr4 117862744 117862809 (73291467) + MamGypLTR1b LTR/Gypsy 455 523 (259) 1160051 227 42.1 2.2 3.6 chr4 117960855 117960992 (73193284) + LTR81 LTR/Gypsy 505 640 (549) 1160184 351 36.4 9.6 1.4 chr4 118816358 118816577 (72337699) + LTR81C LTR/Gypsy 377 614 (539) 1161251 342 33.3 4.2 0.0 chr4 118929559 118929654 (72224622) C MamGypLTR1b LTR/Gypsy (259) 523 424 1161379 411 27.8 7.6 7.6 chr4 118929736 118929765 (72224511) C MamGypLTR1b LTR/Gypsy (467) 315 276 1161379 411 27.8 7.6 7.6 chr4 118930218 118930501 (72223775) C MamGypLTR1b LTR/Gypsy (507) 275 1 1161379 228 33.9 10.2 0.0 chr4 119100515 119100632 (72053644) C MamGypLTR1b LTR/Gypsy (5) 779 650 1161591 359 36.2 6.4 3.8 chr4 119104968 119105231 (72049045) C MamGypLTR1b LTR/Gypsy (256) 526 256 1161591 225 27.1 23.3 1.4 chr4 119185489 119185634 (71968642) + MamGypLTR2b LTR/Gypsy 588 765 (157) 1161693 283 31.5 13.9 2.9 chr4 119485920 119486292 (71667984) + MamGypLTR1c LTR/Gypsy 374 776 (8) 1162171 305 24.4 14.3 3.4 chr4 119637804 119637922 (71516354) + MamGypLTR1a LTR/Gypsy 650 781 (3) 1162480 804 27.7 13.6 3.1 chr4 119800842 119801379 (71352897) C MamGypLTR1a LTR/Gypsy (160) 622 4 1162718 392 36.3 6.8 6.0 chr4 120566197 120566433 (70587843) + MamGyp-int LTR/Gypsy 170 410 (4652) 1163819 392 36.3 6.8 6.0 chr4 120566479 120566609 (70587667) + MamGyp-int LTR/Gypsy 411 541 (4521) 1163819 500 29.9 8.0 8.2 chr4 120571852 120572215 (70582061) + MamGypLTR3 LTR/Gypsy 477 839 (0) 1163830 225 27.8 4.5 3.6 chr4 120619167 120619278 (70534998) + LTR81B LTR/Gypsy 191 303 (1090) 1163910 247 28.2 10.5 0.6 chr4 120923724 120923904 (70230372) C MamGypLTR1d LTR/Gypsy (0) 813 592 1164297 503 25.5 2.4 5.5 chr4 121215847 121216041 (69938235) C MamGypLTR2c LTR/Gypsy (124) 1029 819 1164668 247 41.2 5.8 3.6 chr4 121288369 121288645 (69865631) C MamGypLTR2b LTR/Gypsy (605) 317 35 1164762 363 41.0 10.7 1.8 chr4 121892324 121892715 (69261561) + MamGypLTR1a LTR/Gypsy 253 679 (105) 1165512 294 34.4 8.5 5.1 chr4 122093239 122093474 (69060802) + MamGypLTR2b LTR/Gypsy 167 410 (512) 1165760 242 32.5 1.9 2.5 chr4 122093932 122094092 (69060184) + MamGypLTR2b LTR/Gypsy 742 901 (21) 1165760 242 24.2 3.1 6.2 chr4 122198753 122198849 (68955427) C MamGypLTR3 LTR/Gypsy (0) 839 746 1165906 287 20.6 5.0 4.0 chr4 122200732 122200832 (68953444) + LTR81AB LTR/Gypsy 4 105 (173) 1165908 279 28.8 18.8 2.0 chr4 122200915 122201116 (68953160) + LTR81AB LTR/Gypsy 146 424 (926) 1165908 414 26.0 8.2 0.7 chr4 122201873 122202019 (68952257) + LTR81B LTR/Gypsy 1205 1362 (31) 1165909 251 34.8 2.6 0.9 chr4 122637965 122637984 (68516292) + MamGypLTR1d LTR/Gypsy 584 604 (318) 1166489 366 31.9 7.3 1.6 chr4 122638337 122638534 (68515742) + MamGypLTR1d LTR/Gypsy 578 771 (42) 1166489 345 30.2 9.6 3.0 chr4 122860510 122860676 (68293600) + LTR81B LTR/Gypsy 230 407 (986) 1166869 297 34.1 1.1 0.0 chr4 123590898 123590988 (67563288) C LTR81B LTR/Gypsy (548) 605 514 1167830 423 22.6 21.7 6.4 chr4 123594210 123594395 (67559881) C LTR81B LTR/Gypsy (1023) 370 154 1167830 380 22.1 10.8 5.4 chr4 123594725 123594853 (67559423) C LTR81B LTR/Gypsy (1207) 143 8 1167830 279 27.0 10.9 2.9 chr4 123717597 123717656 (67436620) C MamGypLTR2b LTR/Gypsy (0) 922 855 1168040 279 27.0 10.9 2.9 chr4 123717844 123717992 (67436284) C MamGypLTR2b LTR/Gypsy (68) 854 696 1168040 531 23.2 1.1 9.9 chr4 123719129 123719310 (67434966) C LTR81A LTR/Gypsy (1105) 245 80 1168044 547 26.6 14.9 11.6 chr4 124517006 124517102 (66637174) C LTR81C LTR/Gypsy (33) 1120 1038 1169219 547 26.6 14.9 11.6 chr4 124517406 124517643 (66636633) C LTR81C LTR/Gypsy (116) 1037 774 1169219 647 35.3 2.6 5.0 chr4 124517691 124518074 (66636202) C LTR81C LTR/Gypsy (495) 658 284 1169219 321 22.8 2.1 4.2 chr4 124823406 124823501 (66330775) + MamGypLTR2c LTR/Gypsy 863 956 (112) 1169604 633 32.4 5.0 2.1 chr4 124976135 124976512 (66177764) + LTR81A LTR/Gypsy 13 401 (949) 1169812 230 27.7 10.8 1.9 chr4 125546982 125547173 (65607103) + MamGypLTR2b LTR/Gypsy 568 777 (26) 1170527 366 27.7 7.7 6.4 chr4 125645462 125645681 (65508595) + MamGypLTR2b LTR/Gypsy 671 893 (29) 1170668 473 37.1 13.6 3.8 chr4 126117533 126118056 (65036220) + LTR81 LTR/Gypsy 45 619 (570) 1171317 290 25.0 14.8 1.6 chr4 126118840 126118961 (65035315) + LTR81C LTR/Gypsy 967 1104 (49) 1171319 326 26.8 5.1 1.0 chr4 126474038 126474135 (64680141) C LTR81C LTR/Gypsy (22) 1131 1030 1171781 374 29.7 6.0 3.5 chr4 126672735 126672964 (64481312) C LTR81B LTR/Gypsy (1114) 236 1 1172065 245 32.5 9.4 0.0 chr4 126695384 126695500 (64458776) + MamGypLTR1d LTR/Gypsy 667 794 (19) 1172091 240 24.1 7.6 5.4 chr4 126699429 126699520 (64454756) + MamGypLTR1c LTR/Gypsy 3 96 (707) 1172095 249 36.7 6.4 5.5 chr4 126700560 126700773 (64453503) + MamGypLTR1d LTR/Gypsy 378 573 (211) 1172097 364 25.0 1.9 0.9 chr4 126700886 126700990 (64453286) + MamGypLTR1d LTR/Gypsy 658 763 (50) 1172097 264 29.9 1.3 1.3 chr4 126961082 126961159 (64193117) C MamGypLTR1b LTR/Gypsy (186) 596 519 1172452 246 29.8 6.4 0.0 chr4 127771335 127771428 (63382848) C MamGypLTR1d LTR/Gypsy (13) 800 701 1173449 541 34.6 8.0 7.3 chr4 127981670 127981877 (63172399) C MamGypLTR1c LTR/Gypsy (0) 803 588 1173712 541 34.6 8.0 7.3 chr4 127982112 127982301 (63171975) C MamGypLTR1c LTR/Gypsy (216) 587 402 1173712 433 27.0 1.9 3.2 chr4 127982978 127983134 (63171142) C MamGypLTR1c LTR/Gypsy (634) 169 15 1173712 265 14.8 1.9 0.0 chr4 128169323 128169376 (62984900) C LTR81B LTR/Gypsy (1160) 190 140 1173932 546 31.1 19.7 2.4 chr4 128331010 128331339 (62822937) C MamGypLTR2b LTR/Gypsy (92) 830 444 1174135 572 32.5 13.3 2.2 chr4 128332762 128333123 (62821153) + LTR81C LTR/Gypsy 750 1151 (2) 1174138 237 28.2 15.3 0.0 chr4 128392085 128392169 (62762107) C LTR81C LTR/Gypsy (1002) 151 54 1174206 316 26.5 5.8 3.6 chr4 128464490 128464626 (62689650) + MamGypLTR2b LTR/Gypsy 755 894 (28) 1174296 337 29.1 12.4 2.8 chr4 128471428 128471604 (62682672) C LTR81B LTR/Gypsy (0) 1393 1200 1174309 435 26.6 10.8 3.6 chr4 128471619 128471813 (62682463) C LTR81B LTR/Gypsy (1000) 393 185 1174309 294 27.3 1.1 1.1 chr4 129261499 129261587 (61892689) C LTR81A LTR/Gypsy (1216) 134 46 1175691 581 26.6 3.0 5.5 chr4 129424028 129424262 (61730014) + LTR81AB LTR/Gypsy 4 232 (46) 1175894 674 28.1 17.7 7.2 chr4 129439724 129440249 (61714027) C LTR81 LTR/Gypsy (14) 1175 595 1175920 808 28.0 6.5 2.4 chr4 129485693 129486029 (61668247) + LTR81C LTR/Gypsy 5 355 (995) 1175979 810 28.5 14.6 10.8 chr4 129486231 129486258 (61668018) + LTR81C LTR/Gypsy 481 506 (647) 1175979 810 28.5 14.6 10.8 chr4 129486709 129487325 (61666951) + LTR81C LTR/Gypsy 507 1150 (3) 1175979 444 22.2 9.2 9.2 chr4 129487851 129487945 (61666331) + LTR81C LTR/Gypsy 1127 1231 (119) 1175979 444 22.2 9.2 9.2 chr4 129488193 129488314 (61665962) + LTR81C LTR/Gypsy 1232 1344 (6) 1175979 298 31.0 6.5 3.4 chr4 129503671 129503875 (61650401) C MamGypLTR1a LTR/Gypsy (21) 782 566 1176008 650 26.4 7.2 0.0 chr4 129507412 129507604 (61646672) C MamGypLTR2c LTR/Gypsy (36) 1032 826 1176013 291 27.9 12.2 3.4 chr4 129507614 129507817 (61646459) C LTR81C LTR/Gypsy (362) 791 570 1176014 385 21.5 7.7 6.0 chr4 129583063 129583245 (61571031) C LTR81C LTR/Gypsy (8) 1145 960 1176127 352 25.0 18.6 7.0 chr4 129584001 129584172 (61570104) C LTR81C LTR/Gypsy (221) 932 741 1176127 298 27.2 4.8 5.4 chr4 130328112 130328255 (60826021) + LTR81A LTR/Gypsy 18 160 (1190) 1177181 298 27.2 4.8 5.4 chr4 130328282 130328303 (60825973) + LTR81A LTR/Gypsy 161 183 (1167) 1177181 250 43.1 3.5 1.6 chr4 130345367 130345732 (60808544) + MamGyp-int LTR/Gypsy 3850 4222 (840) 1177208 293 29.0 0.0 10.8 chr4 130432010 130432148 (60722128) + MamGypLTR2b LTR/Gypsy 498 621 (301) 1177310 258 35.0 0.0 3.9 chr4 130758240 130758343 (60395933) C MamGypLTR3 LTR/Gypsy (419) 420 321 1177716 227 38.1 13.3 5.1 chr4 131092517 131092870 (60061406) C MamGypLTR1c LTR/Gypsy (283) 520 138 1178124 260 26.8 17.5 1.8 chr4 131446963 131447076 (59707200) C MamGypLTR3 LTR/Gypsy (87) 752 621 1178578 230 23.4 2.1 0.0 chr4 131486864 131486910 (59667366) + LTR81B LTR/Gypsy 1275 1322 (71) 1178638 237 29.6 10.9 4.3 chr4 131962986 131963123 (59191153) + MamGypLTR1c LTR/Gypsy 62 208 (595) 1179270 270 44.4 3.3 3.1 chr4 132186018 132186242 (58968034) + MamGyp-int LTR/Gypsy 3856 4082 (980) 1179579 270 44.4 3.3 3.1 chr4 132186553 132186686 (58967590) + MamGyp-int LTR/Gypsy 4083 4216 (846) 1179579 578 33.6 2.8 4.4 chr4 132217441 132217689 (58936587) C MamGypLTR2c LTR/Gypsy (535) 533 289 1179621 286 32.2 2.4 4.8 chr4 133279023 133279146 (57875130) C MamGypLTR1d LTR/Gypsy (306) 507 387 1181044 229 27.3 0.0 0.0 chr4 133478903 133478968 (57675308) + MamGypLTR1b LTR/Gypsy 709 774 (8) 1181268 252 27.6 6.7 5.2 chr4 133753313 133753446 (57400830) + MamGypLTR1b LTR/Gypsy 644 779 (3) 1181606 233 34.9 5.9 3.3 chr4 134025808 134026077 (57128199) + MamGypLTR1c LTR/Gypsy 1 277 (526) 1181940 244 35.5 9.0 4.1 chr4 134026250 134026493 (57127783) + MamGypLTR1c LTR/Gypsy 543 798 (5) 1181940 227 30.8 6.2 3.1 chr4 134168457 134168617 (56985659) C LTR81C LTR/Gypsy (0) 1153 988 1182121 261 31.7 5.8 8.3 chr4 134382107 134382152 (56772124) C MamGypLTR2b LTR/Gypsy (15) 907 871 1182396 261 31.7 5.8 8.3 chr4 134382435 134382628 (56771648) C MamGypLTR2b LTR/Gypsy (52) 870 673 1182396 329 24.8 9.6 2.2 chr4 134388621 134388756 (56765520) + MamGypLTR2c LTR/Gypsy 2 147 (921) 1182402 235 25.3 8.2 2.1 chr4 134389506 134389602 (56764674) + MamGypLTR2c LTR/Gypsy 800 902 (20) 1182402 345 34.4 9.2 2.8 chr4 134580846 134581129 (56573147) + MamGypLTR3 LTR/Gypsy 438 739 (100) 1182649 225 32.2 18.0 3.6 chr4 134687584 134687805 (56466471) + MamGypLTR1c LTR/Gypsy 10 263 (540) 1182769 369 31.1 9.0 8.4 chr4 135314189 135314571 (55839705) C LTR81A LTR/Gypsy (49) 1301 729 1183555 232 33.3 1.0 1.0 chr4 136014862 136014964 (55139312) C LTR81 LTR/Gypsy (9) 1180 1078 1184422 229 28.6 16.5 1.6 chr4 136560312 136560432 (54593844) C MamGypLTR1a LTR/Gypsy (173) 611 473 1185118 308 29.6 6.8 0.0 chr4 136562622 136562753 (54591523) C MamGypLTR1d LTR/Gypsy (16) 797 657 1185126 373 28.4 13.7 8.5 chr4 136618007 136618333 (54535943) + LTR81C LTR/Gypsy 826 1188 (1) 1185191 328 40.1 4.2 2.9 chr4 137091613 137091920 (54062356) C MamGyp-int LTR/Gypsy (541) 4521 4210 1185823 260 35.8 9.2 2.6 chr4 137199124 137199275 (53955001) + MamGyp-int LTR/Gypsy 641 802 (4260) 1185945 298 26.9 6.9 8.1 chr4 137470105 137470278 (53683998) C MamGypLTR1c LTR/Gypsy (11) 792 621 1186318 253 35.6 12.1 0.0 chr4 137478737 137478868 (53675408) + MamGypLTR2c LTR/Gypsy 331 478 (590) 1186325 414 33.6 0.0 2.2 chr4 137818949 137819085 (53335191) + MamGypLTR3 LTR/Gypsy 187 320 (519) 1186714 243 32.2 3.4 0.8 chr4 137819288 137819406 (53334870) + MamGypLTR3 LTR/Gypsy 708 829 (10) 1186714 410 35.2 9.1 3.2 chr4 138622742 138623049 (52531227) + MamGypLTR1c LTR/Gypsy 477 802 (1) 1187736 303 26.4 11.5 0.8 chr4 138975398 138975519 (52178757) C MamGypLTR2c LTR/Gypsy (31) 1037 903 1188163 356 30.0 5.5 8.6 chr4 138976215 138976539 (52177737) C LTR81A LTR/Gypsy (925) 425 111 1188164 889 36.4 5.2 3.3 chr4 139198271 139198943 (51955333) + MamGyp-int LTR/Gypsy 6 691 (4371) 1188446 358 26.7 4.0 3.2 chr4 139870074 139870197 (51284079) + LTR81 LTR/Gypsy 1 125 (153) 1189327 386 28.7 14.0 9.8 chr4 139870456 139870576 (51283700) + LTR81 LTR/Gypsy 230 349 (1044) 1189327 394 26.9 11.3 6.0 chr4 139870983 139871207 (51283069) + LTR81 LTR/Gypsy 185 579 (814) 1189327 292 25.0 10.7 0.0 chr4 139878661 139878744 (51275532) + MamGypLTR2c LTR/Gypsy 949 1041 (27) 1189349 348 29.4 6.7 5.6 chr4 140508078 140508272 (50646004) + LTR81A LTR/Gypsy 1118 1314 (36) 1190642 416 17.3 5.9 6.8 chr4 141203559 141203676 (49950600) + MamGypLTR1b LTR/Gypsy 1 117 (665) 1191690 461 29.0 10.2 6.3 chr4 141219048 141219429 (49934847) C MamGypLTR1c LTR/Gypsy (152) 916 382 1191711 1083 29.1 6.4 0.8 chr4 141237977 141238368 (49915908) C MamGypLTR1c LTR/Gypsy (0) 803 390 1191730 433 24.6 1.5 10.7 chr4 141240150 141240250 (49914026) C MamGypLTR1c LTR/Gypsy (548) 255 161 1191730 433 24.6 1.5 10.7 chr4 141240545 141240647 (49913629) C MamGypLTR1c LTR/Gypsy (643) 160 70 1191730 335 37.0 10.5 0.5 chr4 141362956 141363145 (49791131) C MamGyp-int LTR/Gypsy (4318) 744 536 1191884 476 30.4 4.7 3.2 chr4 141499751 141499940 (49654336) + MamGypLTR1d LTR/Gypsy 39 231 (582) 1192098 335 28.8 16.7 0.0 chr4 141500087 141500218 (49654058) + MamGypLTR1d LTR/Gypsy 588 741 (72) 1192099 692 30.1 4.8 6.3 chr4 142111944 142112408 (49041868) C LTR81C LTR/Gypsy (28) 1322 723 1193010 463 27.4 14.5 6.9 chr4 142113111 142113482 (49040794) C LTR81C LTR/Gypsy (912) 438 39 1193010 233 21.9 3.1 0.0 chr4 142116526 142116589 (49037687) + MamGypLTR1d LTR/Gypsy 1 66 (747) 1193015 919 33.0 5.8 0.6 chr4 142116980 142117341 (49036935) + MamGypLTR1c LTR/Gypsy 386 766 (37) 1193016 382 27.5 4.8 4.8 chr4 142236783 142236950 (48917326) + MamGypLTR3 LTR/Gypsy 599 766 (73) 1193167 234 27.6 4.0 2.0 chr4 142514222 142514321 (48639955) C LTR81A LTR/Gypsy (1098) 252 151 1193514 977 31.8 11.1 5.3 chr4 142832543 142833217 (48321059) + LTR81B LTR/Gypsy 348 1061 (332) 1193928 237 22.7 9.4 6.0 chr4 143107570 143107686 (48046590) + MamGypLTR2b LTR/Gypsy 778 898 (24) 1194243 734 36.3 13.2 2.2 chr4 143150603 143151109 (48003167) + LTR81B LTR/Gypsy 672 1234 (159) 1194309 278 20.4 0.0 0.0 chr4 143151133 143151181 (48003095) + LTR81C LTR/Gypsy 971 1019 (134) 1194310 229 26.0 1.2 8.8 chr4 143356267 143356346 (47797930) + LTR81A LTR/Gypsy 1042 1115 (235) 1194561 507 28.5 16.1 1.5 chr4 143652452 143652711 (47501565) + LTR81A LTR/Gypsy 18 315 (1035) 1194953 306 40.9 2.2 1.3 chr4 143652865 143653113 (47501163) + LTR81A LTR/Gypsy 568 822 (571) 1194954 274 28.9 9.5 9.9 chr4 143772704 143772956 (47381320) + MamGypLTR2b LTR/Gypsy 643 894 (28) 1195123 285 25.8 3.2 2.1 chr4 143776645 143776739 (47377537) C LTR81C LTR/Gypsy (1049) 104 9 1195130 539 23.0 14.1 2.1 chr4 143875402 143875592 (47278684) + MamGypLTR2b LTR/Gypsy 703 916 (6) 1195234 412 28.4 4.5 5.7 chr4 143895615 143895771 (47258505) + MamGypLTR3 LTR/Gypsy 337 491 (348) 1195261 364 35.4 2.2 7.0 chr4 143896004 143896231 (47258045) + MamGypLTR3 LTR/Gypsy 619 835 (4) 1195261 509 33.0 4.4 3.1 chr4 144007144 144007371 (47146905) + LTR81C LTR/Gypsy 7 237 (916) 1195401 352 23.6 8.1 14.8 chr4 144009317 144009465 (47144811) C MamGypLTR2c LTR/Gypsy (601) 467 329 1195406 284 25.5 2.3 17.5 chr4 144009546 144009612 (47144664) C LTR81A LTR/Gypsy (1020) 330 267 1195407 284 25.7 4.8 16.0 chr4 144009853 144010006 (47144270) C LTR81A LTR/Gypsy (1084) 266 116 1195407 332 22.9 0.9 3.7 chr4 144032119 144032227 (47122049) + LTR81B LTR/Gypsy 82 187 (1206) 1195435 327 29.6 0.0 8.5 chr4 144235538 144235655 (46918621) + MamGypLTR1d LTR/Gypsy 462 569 (244) 1195730 228 30.0 7.6 2.2 chr4 144235671 144235762 (46918514) + MamGypLTR1d LTR/Gypsy 543 639 (164) 1195730 240 37.6 1.2 1.2 chr4 144632304 144632389 (46521887) + MamGypLTR3 LTR/Gypsy 9 94 (745) 1196249 241 35.0 5.0 0.8 chr4 144750428 144750548 (46403728) C MamGypLTR1c LTR/Gypsy (187) 616 491 1196413 232 34.2 5.0 0.8 chr4 144871384 144871504 (46282772) C MamGypLTR1c LTR/Gypsy (187) 616 491 1196580 255 21.9 2.3 13.0 chr4 145028634 145028684 (46125592) C MamGypLTR2b LTR/Gypsy (29) 893 854 1196810 255 21.9 2.3 13.0 chr4 145028988 145029066 (46125210) C MamGypLTR2b LTR/Gypsy (69) 853 777 1196810 302 33.0 4.6 1.1 chr4 145116510 145116723 (46037553) C MamGypLTR1d LTR/Gypsy (10) 803 563 1196929 246 31.0 7.6 1.5 chr4 145239453 145239583 (45914693) C MamGypLTR2c LTR/Gypsy (0) 1068 930 1197070 593 27.9 17.5 1.4 chr4 145255966 145256256 (45898020) C MamGypLTR2c LTR/Gypsy (439) 629 292 1197090 228 30.5 2.0 6.6 chr4 145294926 145295076 (45859200) + MamGypLTR1c LTR/Gypsy 55 198 (605) 1197142 360 28.9 6.6 17.3 chr4 145442419 145442996 (45711280) C MamGypLTR1d LTR/Gypsy (248) 565 50 1197301 532 32.4 3.4 6.9 chr4 145771428 145771689 (45382587) + MamGypLTR2c LTR/Gypsy 57 309 (759) 1197723 425 27.3 3.9 3.9 chr4 146173215 146173393 (44980883) C MamGypLTR1d LTR/Gypsy (0) 813 635 1198245 708 27.6 8.3 7.1 chr4 146373497 146373835 (44780441) + MamGypLTR3 LTR/Gypsy 497 839 (0) 1198539 315 28.2 6.3 1.3 chr4 147134260 147134417 (44019859) + MamGypLTR1b LTR/Gypsy 3 168 (614) 1199559 232 23.3 0.0 6.2 chr4 147134767 147134830 (44019446) + MamGypLTR1b LTR/Gypsy 654 713 (69) 1199559 467 32.2 8.0 4.9 chr4 147334765 147335419 (43818857) + LTR81A LTR/Gypsy 13 727 (666) 1199854 550 26.3 1.6 3.2 chr4 147833673 147833857 (43320419) + MamGypLTR2b LTR/Gypsy 736 917 (5) 1200500 455 28.5 19.9 2.6 chr4 148025676 148026057 (43128219) C LTR81B LTR/Gypsy (10) 1383 936 1200732 378 20.5 0.0 0.0 chr4 148029218 148029295 (43124981) C LTR81AB LTR/Gypsy (48) 230 153 1200734 481 36.5 0.5 1.6 chr4 148198104 148198287 (42955989) + LTR81C LTR/Gypsy 296 477 (676) 1200920 251 26.6 3.8 0.0 chr4 148198815 148198893 (42955383) + LTR81 LTR/Gypsy 1076 1157 (32) 1200921 236 27.4 4.0 4.0 chr4 148478358 148478433 (42675843) + LTR81A LTR/Gypsy 1036 1111 (239) 1201295 553 30.6 13.9 3.3 chr4 148629863 148629986 (42524290) + MamGypLTR2c LTR/Gypsy 57 202 (866) 1201606 553 30.6 13.9 3.3 chr4 148630995 148631143 (42523133) + MamGypLTR2c LTR/Gypsy 203 359 (709) 1201606 382 34.7 3.4 6.4 chr4 149299085 149299318 (41854958) + MamGypLTR1b LTR/Gypsy 465 691 (91) 1202531 484 32.0 13.7 2.1 chr4 149425847 149426181 (41728095) + MamGypLTR1b LTR/Gypsy 406 779 (3) 1202717 266 24.0 1.8 4.6 chr4 149621279 149621387 (41532889) C LTR81AB LTR/Gypsy (170) 108 3 1202978 281 33.0 9.6 0.6 chr4 150285438 150285614 (40868662) + MamGypLTR2c LTR/Gypsy 428 620 (448) 1203776 233 24.6 0.0 0.0 chr4 150285679 150285735 (40868541) + MamGypLTR2c LTR/Gypsy 704 760 (308) 1203776 310 31.1 2.0 2.0 chr4 150764129 150764279 (40389997) C MamGyp-int LTR/Gypsy (4814) 248 98 1204397 546 21.0 2.7 10.2 chr4 150873091 150873276 (40281000) C MamGypLTR1b LTR/Gypsy (7) 775 604 1204534 227 34.6 2.6 0.0 chr4 150873573 150873650 (40280626) C MamGypLTR1b LTR/Gypsy (233) 551 472 1204534 293 21.3 18.3 8.9 chr4 150873802 150873981 (40280295) C MamGypLTR1a LTR/Gypsy (559) 225 29 1204536 548 24.8 19.5 3.2 chr4 150902740 150903052 (40251224) C LTR81C LTR/Gypsy (0) 1153 790 1204570 361 23.0 4.6 11.8 chr4 150903940 150904092 (40250184) C LTR81C LTR/Gypsy (136) 142 1 1204570 700 34.6 9.8 6.2 chr4 151339811 151340193 (39814083) + MamGypLTR1a LTR/Gypsy 12 389 (395) 1205244 700 34.6 9.8 6.2 chr4 151340383 151340723 (39813553) + MamGypLTR1a LTR/Gypsy 390 762 (22) 1205244 641 25.0 11.4 3.8 chr4 152706957 152707272 (38447004) C LTR81B LTR/Gypsy (980) 413 74 1207448 396 32.0 7.1 2.4 chr4 153606898 153607108 (37547168) C MamGypLTR2b LTR/Gypsy (6) 916 696 1208833 227 21.9 1.2 11.0 chr4 153681120 153681201 (37473075) C MamGypLTR2c LTR/Gypsy (72) 996 923 1208957 254 33.3 5.7 5.1 chr4 154840023 154840199 (36314077) C LTR81B LTR/Gypsy (935) 458 281 1210681 243 27.8 5.3 12.0 chr4 154849314 154849579 (36304697) + MamGypLTR1b LTR/Gypsy 16 263 (519) 1210698 281 30.3 5.4 1.4 chr4 154849933 154850079 (36304197) + MamGypLTR1b LTR/Gypsy 622 774 (8) 1210698 229 23.1 0.0 1.9 chr4 155039495 155039547 (36114729) + MamGypLTR3 LTR/Gypsy 481 532 (307) 1210924 233 23.1 9.7 2.1 chr4 155215530 155215622 (35938654) C LTR81A LTR/Gypsy (0) 1350 1251 1211124 512 26.1 6.6 0.6 chr4 155215629 155215794 (35938482) C LTR81A LTR/Gypsy (1174) 176 1 1211124 312 24.8 11.3 1.7 chr4 155433748 155433862 (35720414) + MamGypLTR2c LTR/Gypsy 896 1021 (47) 1211444 480 21.8 6.2 8.1 chr4 155450791 155450950 (35703326) + LTR81A LTR/Gypsy 27 183 (1167) 1211461 458 35.2 11.3 5.4 chr4 156353170 156353305 (34800971) + MamGypLTR2c LTR/Gypsy 6 143 (925) 1212702 458 35.2 11.3 5.4 chr4 156353615 156354368 (34799908) + MamGypLTR2c LTR/Gypsy 144 949 (119) 1212702 347 33.5 9.2 6.7 chr4 156506446 156506727 (34647549) + MamGypLTR1a LTR/Gypsy 162 450 (332) 1212928 281 25.5 11.1 1.9 chr4 157105616 157105723 (34048553) + MamGypLTR1b LTR/Gypsy 1 118 (664) 1213770 314 28.4 2.0 8.7 chr4 157106447 157106609 (34047667) + MamGypLTR1a LTR/Gypsy 623 782 (21) 1213772 442 35.6 4.9 0.5 chr4 157240059 157240281 (33913995) + LTR81C LTR/Gypsy 490 722 (431) 1213946 398 27.9 2.6 5.8 chr4 157404560 157404715 (33749561) C LTR81B LTR/Gypsy (1234) 159 9 1214166 268 35.4 6.7 2.4 chr4 157406201 157406365 (33747911) C LTR81 LTR/Gypsy (323) 866 695 1214168 408 26.4 15.7 0.0 chr4 157640697 157640855 (33513421) C MamGypLTR2c LTR/Gypsy (883) 185 2 1214475 370 20.2 3.2 1.1 chr4 157966846 157966940 (33187336) + MamGypLTR3 LTR/Gypsy 545 641 (198) 1214937 296 38.6 4.6 3.2 chr4 158119946 158120226 (33034050) C MamGypLTR1b LTR/Gypsy (37) 745 461 1215135 227 0.0 0.0 3.3 chr4 158728971 158729000 (32425276) + MamGypLTR2c LTR/Gypsy 870 898 (170) 1215916 638 28.3 12.1 2.7 chr4 158901406 158901703 (32252573) C LTR81A LTR/Gypsy (348) 1002 677 1216143 298 21.9 12.3 0.9 chr4 159096418 159096523 (32057753) + MamGypLTR2b LTR/Gypsy 805 922 (0) 1216387 362 32.0 9.8 2.2 chr4 159296295 159296518 (31857758) + MamGypLTR3 LTR/Gypsy 166 406 (433) 1216648 287 17.1 5.2 9.1 chr4 159431251 159431327 (31722949) + MamGypLTR1b LTR/Gypsy 672 745 (37) 1216822 236 38.3 5.0 4.6 chr4 159503776 159503994 (31650282) C MamGypLTR2b LTR/Gypsy (607) 315 96 1216928 258 25.5 1.8 7.3 chr4 159512402 159512511 (31641765) C LTR81 LTR/Gypsy (213) 976 873 1216942 236 26.1 3.8 12.1 chr4 159649875 159650031 (31504245) + MamGypLTR1c LTR/Gypsy 43 186 (617) 1217169 318 33.7 6.0 1.2 chr4 159650293 159650460 (31503816) + MamGypLTR1c LTR/Gypsy 314 489 (314) 1217169 307 36.4 4.0 3.2 chr4 159650583 159650832 (31503444) + MamGypLTR1c LTR/Gypsy 528 779 (24) 1217169 559 32.9 13.5 5.7 chr4 160656113 160656312 (30497964) C MamGypLTR1b LTR/Gypsy (3) 779 552 1218622 559 32.9 13.5 5.7 chr4 160656770 160657132 (30497144) C MamGypLTR1b LTR/Gypsy (231) 551 172 1218622 290 25.7 11.5 5.4 chr4 160785011 160785158 (30369118) C LTR81B LTR/Gypsy (1085) 308 152 1218779 230 31.9 0.0 1.4 chr4 160942590 160942662 (30211614) C MamGypLTR1b LTR/Gypsy (261) 521 450 1218960 373 36.8 11.5 3.6 chr4 161740562 161741246 (29413030) + LTR81B LTR/Gypsy 110 848 (545) 1219893 338 31.4 1.9 2.5 chr4 162180815 162180974 (28973302) + MamGypLTR1c LTR/Gypsy 645 803 (0) 1220465 306 29.9 17.2 1.2 chr4 162851925 162852093 (28302183) C MamGypLTR1c LTR/Gypsy (556) 247 52 1221407 271 26.8 3.6 9.3 chr4 162904408 162904547 (28249729) + MamGypLTR1c LTR/Gypsy 60 191 (612) 1221481 312 34.9 7.2 8.0 chr4 163178862 163179098 (27975178) + LTR81 LTR/Gypsy 700 934 (255) 1221885 241 27.4 2.4 1.2 chr4 163179286 163179370 (27974906) + LTR81 LTR/Gypsy 1259 1344 (6) 1221885 247 10.3 0.0 0.0 chr4 163359061 163359099 (27795177) C MamGypLTR1d LTR/Gypsy (57) 756 718 1222155 308 37.5 6.1 4.4 chr4 163477698 163477990 (27676286) + MamGypLTR1b LTR/Gypsy 454 751 (31) 1222335 245 29.3 1.2 4.7 chr4 163657019 163657104 (27497172) + LTR81B LTR/Gypsy 296 378 (1015) 1222558 320 25.6 8.5 0.8 chr4 163800919 163801036 (27353240) C MamGypLTR1b LTR/Gypsy (5) 777 651 1222761 311 27.6 27.5 3.5 chr4 163930600 163930828 (27223448) C MamGypLTR1b LTR/Gypsy (39) 743 460 1222937 296 31.9 4.8 3.6 chr4 163981750 163981915 (27172361) C MamGypLTR1c LTR/Gypsy (22) 781 614 1222988 286 22.5 11.8 5.2 chr4 164019593 164019728 (27134548) + LTR81B LTR/Gypsy 178 322 (1071) 1223047 444 31.2 4.2 0.7 chr4 164122279 164122420 (27031856) + MamGypLTR1b LTR/Gypsy 363 509 (273) 1223164 289 31.7 4.6 5.6 chr4 164327105 164327301 (26826975) C LTR81 LTR/Gypsy (198) 991 797 1223443 242 30.6 10.7 3.7 chr4 165353672 165353858 (25800418) + LTR81C LTR/Gypsy 938 1137 (16) 1224861 441 30.1 6.4 3.2 chr4 166510716 166511027 (24643249) + LTR81B LTR/Gypsy 8 329 (1064) 1226711 280 30.8 2.9 2.9 chr4 166854377 166854513 (24299763) C LTR81 LTR/Gypsy (265) 924 788 1227162 271 24.5 12.9 4.1 chr4 166997865 166998034 (24156242) C LTR81B LTR/Gypsy (1145) 248 64 1227331 236 32.0 0.0 4.9 chr4 167938699 167938780 (23215496) + LTR81B LTR/Gypsy 1083 1160 (233) 1228513 416 19.8 1.0 4.0 chr4 169087659 169087758 (22066518) + LTR81A LTR/Gypsy 127 223 (1127) 1229962 288 33.2 6.4 6.1 chr4 169096994 169097352 (22056924) C LTR81A LTR/Gypsy (38) 1355 996 1229976 408 26.8 8.0 9.4 chr4 169098370 169098657 (22055619) C LTR81A LTR/Gypsy (1048) 302 19 1229976 241 30.9 3.5 2.6 chr4 169204029 169204141 (21950135) + LTR81C LTR/Gypsy 66 179 (974) 1230109 234 25.7 9.4 3.4 chr4 169253481 169253651 (21900625) C MamGypLTR1b LTR/Gypsy (203) 581 405 1230193 233 21.4 17.2 8.9 chr4 169680490 169680658 (21473618) C MamGypLTR2c LTR/Gypsy (12) 1056 874 1230787 622 21.3 13.5 1.1 chr4 169990011 169990195 (21164081) + MamGypLTR2c LTR/Gypsy 861 1068 (0) 1231241 381 27.4 3.1 7.1 chr4 169998061 169998284 (21155992) + MamGypLTR3 LTR/Gypsy 136 350 (489) 1231259 754 27.3 11.2 1.7 chr4 170841509 170841795 (20312481) C LTR81A LTR/Gypsy (999) 351 38 1232564 560 25.7 17.5 4.8 chr4 170861061 170861234 (20293042) C LTR81C LTR/Gypsy (0) 1153 982 1232604 560 25.7 17.5 4.8 chr4 170861612 170861791 (20292485) C LTR81C LTR/Gypsy (172) 981 754 1232604 341 27.7 14.4 0.6 chr4 170864114 170864273 (20290003) C LTR81C LTR/Gypsy (934) 219 38 1232604 270 35.2 4.6 4.6 chr4 171066476 171066627 (20087649) + MamGypLTR3 LTR/Gypsy 147 298 (541) 1232870 313 33.1 1.9 3.1 chr4 171066870 171067028 (20087248) + MamGypLTR3 LTR/Gypsy 571 727 (112) 1232870 257 23.7 10.2 1.0 chr4 171067152 171067249 (20087027) + MamGypLTR3 LTR/Gypsy 726 832 (7) 1232870 725 32.6 2.7 7.1 chr4 171180344 171180591 (19973685) + MamGyp-int LTR/Gypsy 4413 4661 (401) 1232995 725 32.6 2.7 7.1 chr4 171180783 171180827 (19973449) + MamGyp-int LTR/Gypsy 4662 4693 (369) 1232995 268 28.4 5.6 2.2 chr4 171274456 171274545 (19879731) C MamGypLTR1b LTR/Gypsy (278) 504 412 1233113 399 34.5 12.3 4.4 chr4 171366804 171367234 (19787042) + LTR81A LTR/Gypsy 703 1167 (183) 1233202 550 25.9 16.8 1.1 chr4 171572088 171572278 (19581998) C MamGypLTR1a LTR/Gypsy (549) 235 15 1233467 276 36.7 1.4 2.1 chr4 172083217 172083358 (19070918) + MamGyp-int LTR/Gypsy 3937 4077 (985) 1234129 743 32.7 0.5 0.9 chr4 172083735 172083953 (19070323) + MamGyp-int LTR/Gypsy 4495 4712 (350) 1234129 269 29.8 13.8 9.2 chr4 172195947 172196271 (18958005) + MamGypLTR1c LTR/Gypsy 1 340 (463) 1234265 506 29.3 6.4 2.5 chr4 172802798 172803031 (18351245) C LTR81AB LTR/Gypsy (10) 268 26 1235044 236 27.4 0.0 15.0 chr4 172970790 172970853 (18183423) C MamGypLTR2c LTR/Gypsy (112) 956 907 1235260 236 27.4 0.0 15.0 chr4 172971166 172971233 (18183043) C MamGypLTR2c LTR/Gypsy (162) 906 844 1235260 279 27.7 4.8 1.9 chr4 173022545 173022647 (18131629) C LTR81A LTR/Gypsy (1208) 142 37 1235343 420 27.4 10.5 1.1 chr4 173190678 173190858 (17963418) + MamGypLTR2c LTR/Gypsy 842 1039 (29) 1235545 244 33.0 16.2 1.5 chr4 173206870 173207140 (17947136) C MamGypLTR1a LTR/Gypsy (469) 315 5 1235580 445 30.0 4.6 2.0 chr4 173436241 173436393 (17717883) C MamGypLTR2c LTR/Gypsy (5) 1063 907 1235858 275 21.3 2.7 0.0 chr4 173747147 173747221 (17407055) C MamGypLTR2c LTR/Gypsy (0) 1068 992 1236295 270 22.1 0.5 1.1 chr4 173799376 173799462 (17354814) C MamGypLTR1a LTR/Gypsy (8) 805 726 1236363 465 31.7 8.7 6.1 chr4 174331506 174331817 (16822459) + MamGypLTR3 LTR/Gypsy 483 802 (37) 1237062 361 37.0 2.1 1.6 chr4 174347069 174347175 (16807101) C LTR81B LTR/Gypsy (664) 729 622 1237086 361 37.0 2.1 1.6 chr4 174347356 174347439 (16806837) C LTR81B LTR/Gypsy (772) 621 537 1237086 496 23.7 11.1 6.6 chr4 174347920 174348100 (16806176) C LTR81A LTR/Gypsy (1139) 211 23 1237089 274 30.4 9.4 4.2 chr4 174396164 174396376 (16757900) + MamGypLTR1d LTR/Gypsy 1 224 (589) 1237170 260 33.8 12.1 1.4 chr4 174690997 174691137 (16463139) + MamGypLTR2b LTR/Gypsy 161 316 (606) 1237525 268 27.4 10.8 2.0 chr4 174692754 174692908 (16461368) C LTR81A LTR/Gypsy (124) 1269 1125 1237531 356 25.5 1.0 1.0 chr4 174692957 174693055 (16461221) C LTR81A LTR/Gypsy (1046) 304 206 1237531 314 34.2 5.9 5.9 chr4 174713848 174714117 (16440159) + MamGypLTR1c LTR/Gypsy 527 796 (7) 1237540 246 22.6 9.5 11.2 chr4 174831821 174831999 (16322277) C LTR81AB LTR/Gypsy (99) 179 4 1237710 249 23.8 13.8 3.7 chr4 174874022 174874130 (16280146) C LTR81B LTR/Gypsy (11) 1382 1263 1237769 263 35.5 9.3 5.8 chr4 175048320 175048597 (16105679) + MamGypLTR3 LTR/Gypsy 121 408 (431) 1238001 291 35.6 8.9 3.5 chr4 175305158 175305416 (15848860) + LTR81 LTR/Gypsy 740 1012 (177) 1238346 294 20.4 0.0 0.0 chr4 175305616 175305664 (15848612) + LTR81 LTR/Gypsy 1141 1189 (0) 1238346 289 33.1 11.3 4.2 chr4 175854346 175854610 (15299666) + MamGypLTR2b LTR/Gypsy 593 876 (46) 1239049 341 34.0 17.1 2.2 chr4 176260503 176261058 (14893218) C MamGypLTR2c LTR/Gypsy (387) 681 43 1239536 225 17.9 13.8 3.5 chr4 176359131 176359217 (14795059) + MamGypLTR1c LTR/Gypsy 704 799 (4) 1239648 230 36.7 15.2 0.4 chr4 176817391 176817620 (14336656) C MamGypLTR1a LTR/Gypsy (229) 555 292 1240257 431 29.4 0.0 3.5 chr4 176817795 176817935 (14336341) C MamGypLTR1a LTR/Gypsy (646) 138 3 1240257 416 33.1 15.7 3.6 chr4 176944017 176944430 (14209846) C MamGypLTR1a LTR/Gypsy (2) 782 319 1240427 526 26.0 7.2 12.2 chr4 177132341 177132603 (14021673) + MamGypLTR2b LTR/Gypsy 669 918 (4) 1240715 599 28.6 16.1 6.6 chr4 177371766 177372281 (13781995) + MamGypLTR2c LTR/Gypsy 490 1054 (14) 1241012 545 35.6 7.4 2.6 chr4 178117247 178117517 (13036759) C MamGypLTR1b LTR/Gypsy (162) 620 337 1242050 264 33.0 4.8 3.5 chr4 178314379 178314607 (12839669) + MamGypLTR1b LTR/Gypsy 3 234 (548) 1242346 254 27.2 12.2 0.9 chr4 178314885 178314999 (12839277) + MamGypLTR1b LTR/Gypsy 649 776 (6) 1242346 343 30.2 5.0 1.6 chr4 179760106 179760226 (11394050) + MamGypLTR2c LTR/Gypsy 388 512 (556) 1244296 292 34.2 0.9 1.8 chr4 179912075 179912187 (11242089) + LTR81 LTR/Gypsy 843 954 (235) 1244520 251 41.0 1.4 0.0 chr4 180047449 180047587 (11106689) C MamGypLTR1b LTR/Gypsy (300) 482 342 1244694 261 32.2 9.2 5.4 chr4 180564794 180565033 (10589243) + MamGypLTR3 LTR/Gypsy 574 822 (17) 1245387 244 22.6 10.8 0.0 chr4 181162945 181163046 (9991230) + MamGypLTR2b LTR/Gypsy 767 879 (43) 1246164 274 26.3 0.0 1.7 chr4 181654054 181654111 (9500165) C MamGypLTR1a LTR/Gypsy (303) 481 425 1246804 335 33.0 3.5 2.0 chr4 182061838 182062035 (9092241) C MamGypLTR1b LTR/Gypsy (16) 766 566 1247348 348 32.3 16.5 1.4 chr4 182487534 182487879 (8666397) C MamGypLTR2b LTR/Gypsy (28) 894 497 1247871 376 26.7 3.6 2.9 chr4 182893885 182894023 (8260253) + MamGypLTR1a LTR/Gypsy 645 784 (0) 1248378 228 23.3 8.6 3.2 chr4 183483310 183483402 (7670874) C MamGypLTR1c LTR/Gypsy (25) 778 681 1249136 376 32.7 4.6 2.0 chr4 183545056 183545208 (7609068) C MamGypLTR1c LTR/Gypsy (309) 494 338 1249242 336 25.3 18.4 8.9 chr4 183545623 183545969 (7608307) C MamGypLTR1c LTR/Gypsy (390) 413 34 1249243 555 24.9 13.8 9.6 chr4 183879990 183880344 (7273932) + LTR81A LTR/Gypsy 955 1324 (26) 1249699 373 28.3 13.4 3.4 chr4 184263443 184263621 (6890655) C LTR81C LTR/Gypsy (38) 1115 919 1250277 263 29.3 14.7 6.8 chr4 184357524 184357907 (6796369) + MamGypLTR2c LTR/Gypsy 137 552 (516) 1250452 502 28.6 2.8 6.1 chr4 184357938 184358068 (6796208) + MamGypLTR1c LTR/Gypsy 599 729 (74) 1250453 502 28.6 2.8 6.1 chr4 184358382 184358461 (6795815) + MamGypLTR1c LTR/Gypsy 730 803 (0) 1250453 260 19.6 15.9 9.7 chr4 184362704 184362816 (6791460) C MamGypLTR2c LTR/Gypsy (101) 967 848 1250463 277 26.1 5.2 5.8 chr4 184690709 184690839 (6463437) + MamGypLTR1d LTR/Gypsy 452 587 (226) 1251062 281 29.6 6.7 9.8 chr4 185115929 185116177 (6038099) + MamGypLTR1a LTR/Gypsy 465 705 (79) 1251641 457 34.2 7.1 3.4 chr4 185203187 185203425 (5950851) + LTR81 LTR/Gypsy 173 420 (769) 1251759 565 31.3 5.9 2.5 chr4 185203450 185203841 (5950435) + LTR81 LTR/Gypsy 527 1095 (298) 1251759 388 26.7 10.4 3.3 chr4 185204297 185204478 (5949798) + LTR81 LTR/Gypsy 1196 1390 (3) 1251759 250 22.5 37.5 0.0 chr4 186058354 186058450 (5095826) C MamGypLTR1c LTR/Gypsy (3) 810 679 1253154 251 26.3 13.5 11.7 chr4 186390570 186390953 (4763323) C MamGypLTR2c LTR/Gypsy (45) 1023 633 1253740 271 22.9 6.6 9.3 chr4 186422076 186422221 (4732055) + LTR81A LTR/Gypsy 671 811 (582) 1253793 326 26.3 9.4 3.1 chr4 186422636 186422827 (4731449) + LTR81A LTR/Gypsy 1119 1322 (28) 1253793 683 27.2 11.3 9.9 chr4 186491540 186492027 (4662249) + LTR81C LTR/Gypsy 553 1060 (93) 1253888 683 27.2 11.3 9.9 chr4 186492287 186492373 (4661903) + LTR81C LTR/Gypsy 1061 1136 (17) 1253888 309 31.5 12.8 4.7 chr4 186788694 186789076 (4365200) C MamGypLTR1b LTR/Gypsy (13) 769 356 1254234 377 24.7 7.9 3.2 chr4 186909172 186909294 (4244982) + MamGypLTR1c LTR/Gypsy 683 797 (6) 1254420 259 33.3 0.0 0.0 chr4 186953014 186953112 (4201164) + LTR81B LTR/Gypsy 1295 1393 (0) 1254480 290 36.8 9.0 2.1 chr4 187322483 187322715 (3831561) + MamGyp-int LTR/Gypsy 1521 1769 (3293) 1254991 307 36.4 4.5 5.5 chr4 187662249 187662334 (3491942) + MamGyp-int LTR/Gypsy 2198 2282 (2780) 1255449 307 36.4 4.5 5.5 chr4 187662678 187662994 (3491282) + MamGyp-int LTR/Gypsy 2283 2597 (2465) 1255449 952 21.2 1.5 3.8 chr4 187782988 187783252 (3371024) + LTR81AB LTR/Gypsy 10 268 (10) 1255622 316 30.0 12.0 1.4 chr4 187783419 187783738 (3370538) + LTR81B LTR/Gypsy 628 1030 (363) 1255623 340 23.1 22.8 1.2 chr4 187784016 187784177 (3370099) + LTR81AB LTR/Gypsy 932 1128 (25) 1255622 335 33.4 8.1 5.3 chr4 188110175 188110338 (3043938) C MamGypLTR1a LTR/Gypsy (346) 438 270 1256041 335 33.4 8.1 5.3 chr4 188110647 188110838 (3043438) C MamGypLTR1a LTR/Gypsy (515) 269 73 1256041 281 27.3 3.7 9.9 chr4 188115715 188115905 (3038371) + LTR81A LTR/Gypsy 36 214 (1136) 1256050 471 34.1 2.7 3.2 chr4 188200564 188200751 (2953525) + LTR81C LTR/Gypsy 42 228 (925) 1256164 268 35.3 4.2 4.2 chr4 188606539 188606899 (2547377) C MamGypLTR1d LTR/Gypsy (195) 618 258 1256692 237 33.3 6.7 0.0 chr4 189176189 189176293 (1977983) C LTR81 LTR/Gypsy (457) 732 621 1257645 283 24.4 1.2 7.1 chr4 189204621 189204704 (1949572) + MamGypLTR1b LTR/Gypsy 74 152 (630) 1257699 715 31.2 12.1 2.7 chr4 189204949 189205469 (1948807) + MamGypLTR1b LTR/Gypsy 213 782 (0) 1257699 270 29.4 5.0 7.5 chr4 189254822 189255020 (1899256) + MamGypLTR2c LTR/Gypsy 858 1051 (17) 1257780 358 32.8 14.1 6.9 chr4 189278192 189278267 (1876009) + MamGypLTR1a LTR/Gypsy 349 426 (358) 1257813 358 32.8 14.1 6.9 chr4 189278570 189278869 (1875407) + MamGypLTR1a LTR/Gypsy 427 752 (32) 1257813 346 34.5 0.7 3.5 chr4 189402122 189402265 (1752011) + LTR81 LTR/Gypsy 621 760 (429) 1257984 286 25.4 12.8 0.0 chr4 190099055 190099162 (1055114) C LTR81C LTR/Gypsy (571) 618 490 1258841 332 23.3 2.4 7.9 chr4 190119659 190119784 (1034492) C MamGypLTR1a LTR/Gypsy (664) 120 2 1258860 233 28.6 0.0 2.5 chr4 190167737 190167815 (986461) + MamGypLTR2b LTR/Gypsy 846 922 (0) 1258912 524 29.7 14.6 4.2 chr4 190749183 190749565 (404711) C LTR81C LTR/Gypsy (2) 1151 729 1259618 255 28.9 10.3 5.8 chr4 190750229 190750452 (403824) C LTR81C LTR/Gypsy (913) 437 204 1259618 254 32.6 6.0 7.0 chr4 190840851 190841051 (313225) C LTR81A LTR/Gypsy (1142) 208 10 1259734 244 25.0 7.3 6.5 chr5 3004737 3004860 (177910400) C MamGypLTR2b LTR/Gypsy (506) 416 292 1262852 274 37.6 0.0 0.0 chr5 4153420 4153504 (176761756) + MamGypLTR3 LTR/Gypsy 262 346 (493) 1264068 536 35.6 10.3 3.6 chr5 4163932 4164372 (176750888) C MamGypLTR3 LTR/Gypsy (0) 839 374 1264083 536 35.6 10.3 3.6 chr5 4164397 4164698 (176750562) C MamGypLTR3 LTR/Gypsy (466) 373 47 1264083 269 32.6 4.3 5.3 chr5 4596580 4596767 (176318493) + MamGypLTR3 LTR/Gypsy 653 838 (1) 1264544 263 33.5 8.3 3.2 chr5 5682636 5682792 (175232468) + MamGypLTR1c LTR/Gypsy 495 659 (144) 1265784 315 26.6 31.8 2.9 chr5 6525470 6525708 (174389552) C MamGypLTR1a LTR/Gypsy (4) 780 473 1266870 394 29.0 3.0 0.0 chr5 7383542 7383672 (173531588) + LTR81AB LTR/Gypsy 124 258 (20) 1267986 225 18.2 4.4 2.9 chr5 7386062 7386129 (173529131) + LTR81A LTR/Gypsy 1223 1291 (59) 1267993 247 27.0 7.6 3.3 chr5 7839511 7839602 (173075658) + MamGypLTR3 LTR/Gypsy 641 736 (103) 1268535 334 32.1 7.9 0.9 chr5 8869384 8869597 (172045663) C MamGypLTR1d LTR/Gypsy (9) 804 576 1269785 237 25.9 6.2 7.5 chr5 8903471 8903616 (172011644) C MamGypLTR1b LTR/Gypsy (43) 739 596 1269825 246 26.6 6.6 7.6 chr5 9029920 9030091 (171885169) + MamGypLTR1a LTR/Gypsy 620 797 (6) 1269948 320 32.1 5.0 4.0 chr5 9156281 9156481 (171758779) C MamGypLTR1c LTR/Gypsy (15) 788 586 1270080 237 23.3 9.3 0.0 chr5 9707850 9707935 (171207325) + MamGypLTR1c LTR/Gypsy 588 681 (122) 1270749 264 17.5 28.1 2.4 chr5 9728265 9728346 (171186914) + MamGypLTR1d LTR/Gypsy 694 796 (17) 1270778 458 31.1 2.7 2.7 chr5 9892210 9892397 (171022863) C LTR81B LTR/Gypsy (945) 448 261 1270991 294 30.2 3.9 3.2 chr5 9911365 9911518 (171003742) C MamGypLTR1c LTR/Gypsy (648) 155 1 1271015 1073 23.2 5.7 1.2 chr5 10853094 10853337 (170061923) C MamGypLTR2c LTR/Gypsy (0) 1068 814 1272440 487 28.4 6.2 8.6 chr5 11086459 11086762 (169828498) + MamGypLTR2b LTR/Gypsy 621 917 (5) 1272736 278 30.0 10.8 3.4 chr5 11300928 11301103 (169614157) C MamGypLTR1b LTR/Gypsy (577) 205 17 1272992 335 32.9 8.8 0.6 chr5 11568861 11569019 (169346241) + MamGypLTR3 LTR/Gypsy 631 802 (37) 1273348 251 36.4 4.0 0.7 chr5 11673173 11673324 (169241936) C MamGypLTR3 LTR/Gypsy (19) 820 664 1273489 652 26.3 4.6 4.6 chr5 11820304 11820562 (169094698) C LTR81AB LTR/Gypsy (19) 259 1 1273690 310 24.1 4.7 7.4 chr5 12116168 12116315 (168798945) + MamGypLTR1c LTR/Gypsy 602 745 (58) 1274064 228 26.7 3.4 3.4 chr5 12416548 12416636 (168498624) + LTR81A LTR/Gypsy 1262 1350 (0) 1274441 341 27.1 5.1 6.5 chr5 13134920 13135057 (167780203) + LTR81B LTR/Gypsy 1042 1177 (216) 1275352 419 32.0 8.8 1.5 chr5 13723276 13723548 (167191712) C MamGyp-int LTR/Gypsy (4138) 924 632 1276116 240 22.7 7.8 2.6 chr5 13755985 13756061 (167159199) + MamGypLTR1d LTR/Gypsy 160 240 (573) 1276161 286 22.3 7.5 2.8 chr5 14055698 14055803 (166859457) + MamGypLTR2c LTR/Gypsy 863 973 (95) 1276591 348 32.0 16.4 1.8 chr5 14140831 14141116 (166774144) + MamGypLTR2b LTR/Gypsy 595 922 (0) 1276742 259 27.2 8.8 8.1 chr5 14646745 14646904 (166268356) C LTR81A LTR/Gypsy (1172) 178 18 1277343 631 24.4 7.0 5.7 chr5 14922099 14922342 (165992918) + LTR81B LTR/Gypsy 1 247 (1146) 1277736 493 26.3 3.4 3.4 chr5 15152766 15152970 (165762290) + LTR81A LTR/Gypsy 10 214 (1136) 1278055 475 32.2 13.6 3.2 chr5 15204212 15204519 (165710741) C MamGypLTR1b LTR/Gypsy (0) 782 443 1278126 269 20.6 4.4 0.0 chr5 15270903 15270988 (165644272) + MamGypLTR2b LTR/Gypsy 806 872 (50) 1278204 297 25.4 12.3 0.0 chr5 15286696 15286809 (165628451) C MamGypLTR1c LTR/Gypsy (7) 796 669 1278216 239 31.4 2.3 1.6 chr5 15287155 15287258 (165628002) C MamGypLTR1d LTR/Gypsy (357) 456 341 1278217 229 31.0 1.7 4.2 chr5 15349238 15349355 (165565905) + LTR81A LTR/Gypsy 73 187 (1163) 1278303 400 36.0 3.8 3.4 chr5 15366803 15367069 (165548191) + MamGyp-int LTR/Gypsy 488 755 (4307) 1278312 308 23.0 17.9 2.3 chr5 15610509 15610691 (165304569) C LTR81B LTR/Gypsy (1038) 312 100 1278621 272 26.9 8.6 7.1 chr5 16605659 16605721 (164309539) + LTR81B LTR/Gypsy 161 228 (1165) 1280029 272 26.9 8.6 7.1 chr5 16606082 16606157 (164309103) + LTR81B LTR/Gypsy 229 302 (1091) 1280029 225 33.7 1.1 3.4 chr5 17368431 17368519 (163546741) C MamGypLTR1d LTR/Gypsy (469) 344 258 1281467 351 28.8 2.7 8.0 chr5 17375389 17375626 (163539634) C MamGypLTR2b LTR/Gypsy (17) 905 556 1281480 281 21.3 29.5 1.1 chr5 17689969 17690063 (163225197) + LTR81A LTR/Gypsy 28 149 (1201) 1281806 292 31.2 3.3 5.0 chr5 17928427 17928608 (162986652) C MamGypLTR3 LTR/Gypsy (0) 839 661 1282121 284 28.9 3.1 1.0 chr5 17956179 17956276 (162958984) + MamGyp-int LTR/Gypsy 340 439 (4623) 1282148 273 32.4 4.5 4.0 chr5 20495152 20495373 (160419887) C MamGypLTR2c LTR/Gypsy (6) 1062 840 1285632 290 31.1 6.7 4.9 chr5 20524799 20525021 (160390239) + LTR81B LTR/Gypsy 183 409 (984) 1285677 267 37.0 6.2 2.3 chr5 20673072 20673248 (160242012) C LTR81C LTR/Gypsy (911) 242 59 1285861 286 25.0 2.1 4.2 chr5 20782401 20782496 (160132764) + LTR81B LTR/Gypsy 214 307 (1086) 1286013 298 29.4 2.0 8.8 chr5 21213697 21213863 (159701397) C MamGypLTR1b LTR/Gypsy (22) 762 608 1286573 262 35.8 7.8 9.2 chr5 21214164 21214352 (159700908) C MamGypLTR1b LTR/Gypsy (177) 607 411 1286573 292 32.1 7.6 1.8 chr5 21268080 21268250 (159647010) C MamGypLTR1b LTR/Gypsy (37) 745 565 1286651 229 3.5 0.0 0.0 chr5 21611181 21611209 (159304051) C LTR81B LTR/Gypsy (1251) 142 114 1287167 301 28.7 23.3 4.4 chr5 21753313 21753651 (159161609) + MamGypLTR2c LTR/Gypsy 92 494 (574) 1287376 271 35.4 13.2 3.6 chr5 22140674 22140922 (158774338) C MamGypLTR1b LTR/Gypsy (12) 770 498 1287920 265 27.5 6.8 1.7 chr5 23363432 23363549 (157551711) + LTR81B LTR/Gypsy 1207 1298 (95) 1289626 352 30.1 9.2 9.5 chr5 23415332 23415625 (157499635) + LTR81C LTR/Gypsy 823 1115 (38) 1289693 378 37.7 9.1 0.6 chr5 23756652 23756982 (157158278) + MamGyp-int LTR/Gypsy 2534 2892 (2170) 1290175 293 29.4 10.1 3.2 chr5 24068236 24068393 (156846867) C LTR81A LTR/Gypsy (1164) 186 18 1290595 255 30.5 1.0 1.0 chr5 24273859 24273954 (156641306) C LTR81AB LTR/Gypsy (179) 99 4 1290883 322 29.9 1.1 1.1 chr5 24609456 24609543 (156305717) + MamGypLTR2c LTR/Gypsy 415 502 (566) 1291324 328 35.0 7.1 6.0 chr5 25685861 25686112 (155229148) + MamGypLTR3 LTR/Gypsy 324 578 (261) 1292771 297 18.7 4.5 3.1 chr5 26140050 26140146 (154775114) C MamGypLTR1d LTR/Gypsy (1) 812 700 1293402 306 37.5 6.7 3.8 chr5 26447086 26447429 (154467831) C LTR81A LTR/Gypsy (293) 1057 704 1293795 597 28.8 5.3 3.7 chr5 27266687 27266931 (153648329) C MamGypLTR2b LTR/Gypsy (1) 921 673 1294960 457 37.5 10.9 1.1 chr5 27712513 27712954 (153202306) + MamGypLTR1a LTR/Gypsy 1 485 (299) 1295582 283 33.1 6.1 1.4 chr5 27846363 27846509 (153068751) + LTR81A LTR/Gypsy 778 931 (419) 1295772 383 22.6 4.0 10.9 chr5 28151966 28152119 (152763141) C LTR81B LTR/Gypsy (9) 1384 1270 1296129 309 22.2 4.2 11.4 chr5 28152493 28152542 (152762718) C LTR81B LTR/Gypsy (152) 770 728 1296129 233 28.8 0.0 0.0 chr5 29362147 29362205 (151553055) C MamGypLTR3 LTR/Gypsy (336) 503 445 1297750 301 25.3 3.8 4.7 chr5 30630806 30630912 (150284348) C MamGypLTR1c LTR/Gypsy (13) 909 700 1299358 376 25.9 0.0 1.2 chr5 30643725 30643810 (150271450) C MamGypLTR3 LTR/Gypsy (38) 801 717 1299376 740 33.8 12.9 7.4 chr5 30963573 30964561 (149950699) + MamGypLTR2c LTR/Gypsy 11 1054 (14) 1299763 302 18.7 12.0 0.0 chr5 31072633 31072707 (149842553) C LTR81A LTR/Gypsy (37) 1356 1273 1299888 233 27.1 1.0 11.5 chr5 31072753 31072848 (149842412) C LTR81A LTR/Gypsy (218) 1175 1090 1299888 354 35.9 4.1 2.5 chr5 31072865 31073061 (149842199) C LTR81A LTR/Gypsy (344) 1006 807 1299888 632 28.4 11.7 7.7 chr5 31284898 31285274 (149629986) + LTR81 LTR/Gypsy 797 1188 (1) 1300161 267 27.3 9.8 0.8 chr5 31332830 31332962 (149582298) C MamGypLTR1d LTR/Gypsy (3) 810 666 1300224 236 21.1 19.8 1.1 chr5 31361167 31361257 (149554003) C MamGypLTR2b LTR/Gypsy (42) 880 773 1300263 283 28.1 0.0 4.3 chr5 31362581 31362673 (149552587) C MamGypLTR2c LTR/Gypsy (977) 91 3 1300265 713 34.4 8.0 5.9 chr5 31998377 31998737 (148916523) + MamGypLTR1a LTR/Gypsy 52 385 (399) 1301393 713 34.4 8.0 5.9 chr5 31998954 31999305 (148915955) + MamGypLTR1a LTR/Gypsy 386 779 (5) 1301393 542 18.2 4.5 3.9 chr5 32202897 32202944 (148712316) C MamGypLTR2b LTR/Gypsy (26) 896 849 1301796 542 18.2 4.5 3.9 chr5 32203250 32203354 (148711906) C MamGypLTR2b LTR/Gypsy (74) 848 742 1301796 322 25.3 7.4 10.3 chr5 32539689 32539891 (148375369) C MamGypLTR1d LTR/Gypsy (616) 197 1 1302453 282 25.0 8.3 5.3 chr5 32580465 32580597 (148334663) C MamGypLTR2b LTR/Gypsy (23) 899 748 1302544 690 30.8 12.0 7.2 chr5 32689036 32689809 (148225451) C MamGypLTR2c LTR/Gypsy (112) 956 146 1302700 1996 27.9 11.6 2.5 chr5 32821356 32822080 (148093180) + LTR81A LTR/Gypsy 1 791 (559) 1302862 579 28.1 10.8 2.5 chr5 32828254 32828494 (148086766) + LTR81C LTR/Gypsy 637 897 (256) 1302867 330 27.9 0.0 5.5 chr5 32828636 32828745 (148086515) + LTR81C LTR/Gypsy 1282 1385 (8) 1302867 277 30.4 3.2 6.3 chr5 33909692 33909849 (147005411) + MamGypLTR1b LTR/Gypsy 612 764 (18) 1304402 286 25.0 2.1 4.2 chr5 34079232 34079327 (146835933) C LTR81B LTR/Gypsy (1086) 307 214 1304658 251 34.6 11.5 1.6 chr5 34409225 34409406 (146505854) C MamGypLTR2b LTR/Gypsy (549) 373 174 1305089 643 32.0 10.6 5.0 chr5 34474887 34475137 (146440123) C MamGypLTR1c LTR/Gypsy (0) 803 541 1305155 643 32.7 10.7 4.9 chr5 34475804 34476089 (146439171) C MamGypLTR1c LTR/Gypsy (263) 540 213 1305155 322 33.6 3.6 0.0 chr5 34476405 34476514 (146438746) C MamGypLTR1c LTR/Gypsy (575) 207 94 1305155 327 27.2 4.0 0.8 chr5 34510462 34510587 (146404673) + MamGypLTR1d LTR/Gypsy 677 806 (7) 1305221 320 25.5 0.7 4.0 chr5 35540047 35540151 (145375109) C LTR81A LTR/Gypsy (1247) 146 44 1306822 259 31.5 8.8 3.4 chr5 35562373 35562520 (145352740) C MamGypLTR2b LTR/Gypsy (73) 849 694 1306858 275 21.9 8.1 3.0 chr5 35663770 35663868 (145251392) C MamGypLTR1a LTR/Gypsy (2) 782 679 1306999 397 32.2 18.0 0.7 chr5 35889859 35890158 (145025102) + MamGypLTR1d LTR/Gypsy 448 799 (14) 1307308 275 26.2 20.8 0.5 chr5 36538902 36539093 (144376167) + LTR81C LTR/Gypsy 908 1138 (15) 1308214 312 27.2 4.0 9.2 chr5 36836063 36836236 (144079024) + LTR81B LTR/Gypsy 14 178 (1215) 1308668 356 27.1 17.0 1.5 chr5 37253102 37253307 (143661953) C LTR81C LTR/Gypsy (8) 1145 908 1309335 241 35.4 5.1 5.5 chr5 37361546 37361838 (143553422) + MamGypLTR1c LTR/Gypsy 492 783 (20) 1309574 579 24.5 18.5 8.4 chr5 37865179 37865583 (143049677) + LTR81A LTR/Gypsy 891 1336 (14) 1310370 225 30.0 0.0 0.0 chr5 38456846 38456905 (142458355) C LTR81A LTR/Gypsy (71) 1279 1220 1311321 383 27.5 6.5 3.2 chr5 39158074 39158197 (141757063) + MamGypLTR3 LTR/Gypsy 712 839 (0) 1312322 670 26.9 14.3 5.7 chr5 39289378 39289657 (141625603) + MamGypLTR1b LTR/Gypsy 3 306 (476) 1312515 312 27.3 2.0 6.5 chr5 39289973 39290125 (141625135) + MamGypLTR1b LTR/Gypsy 637 782 (0) 1312515 261 28.3 5.0 0.0 chr5 40010283 40010381 (140904879) C MamGypLTR1b LTR/Gypsy (22) 760 657 1313499 459 34.8 8.5 7.5 chr5 40024548 40025054 (140890206) + LTR81A LTR/Gypsy 38 549 (801) 1313516 289 25.6 7.6 4.9 chr5 40308868 40309011 (140606249) C LTR81C LTR/Gypsy (0) 1153 1029 1313907 354 21.9 2.8 3.7 chr5 40983669 40983777 (139931483) + LTR81A LTR/Gypsy 38 145 (1205) 1314897 677 36.0 6.7 1.7 chr5 41167360 41167673 (139747587) + MamGypLTR2c LTR/Gypsy 2 334 (734) 1315160 677 36.0 6.7 1.7 chr5 41168946 41169034 (139746226) + MamGypLTR2c LTR/Gypsy 335 425 (643) 1315160 328 29.9 9.8 5.8 chr5 41169452 41169601 (139745659) + MamGypLTR2c LTR/Gypsy 820 982 (86) 1315160 328 29.9 9.8 5.8 chr5 41169982 41170004 (139745256) + MamGypLTR2c LTR/Gypsy 983 1000 (68) 1315160 260 36.0 5.8 5.8 chr5 41241478 41241692 (139673568) + LTR81C LTR/Gypsy 260 474 (679) 1315249 306 32.0 7.9 5.6 chr5 42318773 42318987 (138596273) + MamGypLTR2c LTR/Gypsy 19 238 (830) 1316552 458 33.3 5.5 0.6 chr5 42320579 42320738 (138594522) + MamGypLTR2c LTR/Gypsy 298 465 (603) 1316552 476 30.6 1.5 2.5 chr5 42615041 42615244 (138300016) + MamGypLTR1b LTR/Gypsy 578 779 (3) 1316884 385 29.8 4.5 8.7 chr5 43337481 43337745 (137577515) C LTR81C LTR/Gypsy (22) 1131 878 1317981 404 32.6 9.2 5.3 chr5 43363071 43363352 (137551908) C MamGypLTR3 LTR/Gypsy (0) 839 547 1318016 320 25.1 10.0 3.6 chr5 43711568 43711707 (137203553) C MamGypLTR2b LTR/Gypsy (14) 908 643 1318541 460 26.4 10.6 14.8 chr5 43887855 43888240 (137027020) C LTR81B LTR/Gypsy (16) 1377 1008 1318729 721 27.8 10.1 3.1 chr5 43888800 43889126 (137026134) C LTR81B LTR/Gypsy (1027) 366 17 1318729 430 30.7 22.4 1.5 chr5 44752587 44752854 (136162406) C MamGypLTR1c LTR/Gypsy (3) 800 477 1319695 348 22.9 1.2 1.2 chr5 44754231 44754314 (136160946) C MamGypLTR1c LTR/Gypsy (592) 211 128 1319695 398 31.6 5.2 1.6 chr5 44766050 44766242 (136149018) C MamGypLTR2c LTR/Gypsy (32) 1036 837 1319707 747 22.4 1.5 5.9 chr5 45707206 45707409 (135207851) + LTR81AB LTR/Gypsy 1 195 (83) 1320958 359 28.6 22.0 3.6 chr5 50229919 50230168 (130685092) C LTR81B LTR/Gypsy (73) 1320 1025 1322153 514 30.3 7.7 0.9 chr5 50232294 50232513 (130682747) + MamGyp-int LTR/Gypsy 4441 4675 (387) 1322156 555 31.6 10.1 4.2 chr5 50291143 50291528 (130623732) + LTR81A LTR/Gypsy 910 1318 (32) 1322228 263 27.4 1.3 2.7 chr5 50440662 50440736 (130474524) + MamGypLTR2c LTR/Gypsy 303 376 (692) 1322429 479 25.6 11.0 5.1 chr5 50583805 50584059 (130331201) + LTR81B LTR/Gypsy 12 281 (1112) 1322598 552 31.6 4.5 5.4 chr5 51663462 51663795 (129251465) C LTR81B LTR/Gypsy (945) 448 118 1323938 277 38.3 7.2 3.8 chr5 51861376 51861611 (129053649) C MamGypLTR1c LTR/Gypsy (152) 651 408 1324191 287 29.1 3.7 12.7 chr5 51861783 51862050 (129053210) C MamGypLTR1c LTR/Gypsy (556) 247 4 1324191 307 29.5 2.2 3.7 chr5 52042691 52042824 (128872436) C MamGypLTR1b LTR/Gypsy (11) 771 640 1324405 323 29.9 6.0 4.5 chr5 52042984 52043116 (128872144) C MamGypLTR1b LTR/Gypsy (639) 143 9 1324405 234 33.2 5.7 4.7 chr5 52479797 52480008 (128435252) + LTR81B LTR/Gypsy 284 497 (896) 1325008 275 31.9 0.7 6.2 chr5 52833846 52833989 (128081271) C LTR81A LTR/Gypsy (973) 377 242 1325458 413 31.2 3.5 4.9 chr5 53091487 53091712 (127823548) C MamGypLTR2c LTR/Gypsy (843) 225 3 1325777 238 22.8 1.8 0.0 chr5 53688602 53688658 (127226602) C MamGypLTR1d LTR/Gypsy (0) 813 756 1326652 919 25.8 15.5 3.2 chr5 53904552 53904931 (127010329) C MamGypLTR1a LTR/Gypsy (0) 784 358 1326990 378 30.8 8.0 2.5 chr5 53905418 53905580 (127009680) C MamGypLTR1a LTR/Gypsy (609) 175 4 1326990 272 29.0 0.0 10.8 chr5 53958106 53958244 (126957016) + MamGypLTR2c LTR/Gypsy 845 968 (100) 1327079 314 23.9 14.4 4.6 chr5 54021288 54021466 (126893794) C LTR81A LTR/Gypsy (0) 1393 1206 1327169 639 30.3 7.2 4.2 chr5 54021995 54022325 (126892935) C LTR81B LTR/Gypsy (894) 499 159 1327170 620 33.4 3.4 3.9 chr5 54047332 54047689 (126867571) + MamGypLTR2c LTR/Gypsy 231 586 (482) 1327210 453 27.5 10.3 4.9 chr5 54049516 54049718 (126865542) + MamGypLTR2c LTR/Gypsy 776 989 (79) 1327210 490 30.1 2.5 3.5 chr5 54184994 54185196 (126730064) C MamGypLTR1d LTR/Gypsy (9) 804 604 1327394 262 33.9 3.2 11.0 chr5 54185283 54185501 (126729759) C MamGypLTR1d LTR/Gypsy (225) 578 377 1327394 225 21.6 10.7 1.3 chr5 54325878 54325952 (126589308) C MamGypLTR1d LTR/Gypsy (1) 812 731 1327579 871 28.8 3.9 5.3 chr5 55126180 55126577 (125788683) C MamGypLTR1a LTR/Gypsy (6) 776 377 1328913 730 29.2 17.2 8.2 chr5 55161449 55162127 (125753133) C LTR81A LTR/Gypsy (5) 1345 597 1328975 730 29.2 17.2 8.2 chr5 55162489 55162723 (125752537) C LTR81A LTR/Gypsy (754) 596 349 1328975 605 27.0 17.0 0.5 chr5 55214173 55214384 (125700876) C MamGypLTR2b LTR/Gypsy (4) 918 672 1329065 403 34.7 6.5 3.0 chr5 55301403 55301601 (125613659) C MamGypLTR2b LTR/Gypsy (506) 416 211 1329219 762 26.5 14.1 5.5 chr5 55416174 55416445 (125498815) + MamGypLTR1c LTR/Gypsy 1 304 (499) 1329463 762 26.9 10.0 5.5 chr5 55416747 55417132 (125498128) + MamGypLTR1c LTR/Gypsy 305 745 (58) 1329463 372 24.3 7.5 0.0 chr5 55787601 55787707 (125127553) C MamGypLTR1b LTR/Gypsy (22) 760 646 1330037 415 30.9 5.0 2.8 chr5 55788817 55788996 (125126264) C MamGypLTR1b LTR/Gypsy (214) 568 385 1330037 571 34.1 5.8 6.6 chr5 55840193 55840707 (125074553) + LTR81C LTR/Gypsy 489 999 (154) 1330122 449 32.1 9.7 10.3 chr5 56291335 56291664 (124623596) C LTR81B LTR/Gypsy (792) 601 274 1330778 623 35.1 3.6 3.1 chr5 56351266 56351621 (124563639) C MamGypLTR3 LTR/Gypsy (83) 756 399 1330896 780 32.2 5.2 2.3 chr5 56412354 56412464 (124502796) C MamGypLTR1c LTR/Gypsy (18) 785 679 1331037 780 32.2 5.2 2.3 chr5 56412765 56412960 (124502300) C MamGypLTR1c LTR/Gypsy (125) 678 470 1331037 448 24.8 0.9 0.9 chr5 57420985 57421098 (123494162) + MamGypLTR1d LTR/Gypsy 677 790 (23) 1332539 434 35.2 8.3 1.3 chr5 58082284 58082585 (122832675) C MamGypLTR1c LTR/Gypsy (445) 358 36 1333447 642 29.6 13.2 2.4 chr5 58396597 58396883 (122518377) C MamGypLTR3 LTR/Gypsy (32) 807 490 1333893 406 29.6 7.3 3.4 chr5 59519570 59519803 (121395457) C MamGypLTR2b LTR/Gypsy (0) 922 680 1335428 476 34.8 0.5 3.4 chr5 59520855 59521062 (121394198) C MamGypLTR2b LTR/Gypsy (701) 221 20 1335428 254 15.6 0.0 0.0 chr5 59705487 59705531 (121209729) + LTR81B LTR/Gypsy 138 182 (1211) 1335674 548 23.6 14.8 5.0 chr5 59706132 59706434 (121208826) + LTR81B LTR/Gypsy 1054 1386 (7) 1335675 408 32.0 7.0 4.6 chr5 59840295 59840621 (121074639) C MamGypLTR1b LTR/Gypsy (0) 782 448 1335844 1251 30.8 11.9 10.1 chr5 59874955 59874997 (121040263) C LTR81A LTR/Gypsy (179) 1171 1130 1335882 1251 30.8 11.9 10.1 chr5 59875839 59876839 (121038421) C LTR81A LTR/Gypsy (221) 1129 109 1335882 360 42.0 2.3 1.0 chr5 60088949 60089258 (120826002) + MamGyp-int LTR/Gypsy 1594 1907 (3155) 1336179 262 23.6 0.0 0.0 chr5 60089651 60089705 (120825555) + MamGyp-int LTR/Gypsy 3443 3497 (1565) 1336179 543 31.5 9.1 0.5 chr5 60089970 60090189 (120825071) + MamGyp-int LTR/Gypsy 3914 4152 (910) 1336179 634 31.2 7.9 0.7 chr5 60090297 60090586 (120824674) + MamGyp-int LTR/Gypsy 4312 4622 (440) 1336179 228 37.0 8.1 4.3 chr5 60094178 60094386 (120820874) + MamGypLTR1c LTR/Gypsy 527 743 (60) 1336185 448 34.5 6.8 4.3 chr5 61257268 61257546 (119657714) C MamGypLTR3 LTR/Gypsy (66) 773 488 1337814 882 29.8 6.2 8.5 chr5 61261449 61261800 (119653460) + MamGypLTR1b LTR/Gypsy 437 780 (2) 1337817 265 23.2 4.3 0.0 chr5 62032314 62032382 (118882878) + MamGypLTR1b LTR/Gypsy 694 765 (17) 1339067 396 25.2 6.5 1.9 chr5 62359759 62359912 (118555348) C MamGypLTR2b LTR/Gypsy (24) 898 738 1339465 360 16.2 7.8 3.9 chr5 62360334 62360436 (118554824) + MamGypLTR2b LTR/Gypsy 780 886 (36) 1339467 1100 31.6 7.0 4.4 chr5 62445029 62445600 (118469660) C MamGypLTR3 LTR/Gypsy (0) 839 253 1339582 409 37.0 8.0 5.6 chr5 63175325 63175714 (117739546) + MamGypLTR1a LTR/Gypsy 143 541 (243) 1340535 428 25.2 14.3 3.8 chr5 63548825 63549034 (117366226) + MamGypLTR2c LTR/Gypsy 835 1066 (2) 1340986 290 16.9 24.7 0.0 chr5 63932845 63932921 (116982339) C LTR81 LTR/Gypsy (13) 1176 1118 1341474 260 27.1 6.7 6.0 chr5 63933407 63933555 (116981705) + LTR81C LTR/Gypsy 79 228 (925) 1341475 245 29.3 13.3 8.4 chr5 63934147 63934492 (116980768) + LTR81C LTR/Gypsy 878 1347 (3) 1341475 391 25.7 5.7 2.9 chr5 63977926 63978065 (116937195) + MamGypLTR1b LTR/Gypsy 590 733 (49) 1341548 272 29.6 13.4 6.9 chr5 65617650 65617896 (115297364) + MamGypLTR3 LTR/Gypsy 392 654 (185) 1344020 382 18.2 6.1 7.6 chr5 65652751 65652881 (115262379) + LTR81A LTR/Gypsy 86 214 (1136) 1344076 610 22.3 5.7 3.1 chr5 65654229 65654422 (115260838) C MamGypLTR2b LTR/Gypsy (31) 891 693 1344079 420 36.1 4.7 1.4 chr5 65658587 65658797 (115256463) C MamGypLTR1c LTR/Gypsy (222) 591 374 1344088 463 25.9 6.8 0.7 chr5 65658974 65659121 (115256139) C MamGypLTR1c LTR/Gypsy (535) 268 112 1344088 273 23.2 3.5 3.5 chr5 65692323 65692407 (115222853) + LTR81B LTR/Gypsy 1 85 (193) 1344124 259 27.1 2.4 0.0 chr5 65692441 65692525 (115222735) + LTR81B LTR/Gypsy 138 224 (965) 1344124 383 27.1 11.4 4.0 chr5 65693697 65693923 (115221337) + LTR81B LTR/Gypsy 1102 1345 (48) 1344124 415 22.4 8.0 5.0 chr5 65833750 65833924 (115081336) + LTR81A LTR/Gypsy 1 181 (622) 1344310 706 30.1 8.3 3.1 chr5 65910750 65911257 (115004003) + MamGypLTR1a LTR/Gypsy 1 537 (245) 1344426 233 17.0 0.0 0.0 chr5 66331998 66332044 (114583216) C MamGypLTR1b LTR/Gypsy (735) 47 1 1344995 344 16.6 7.4 8.9 chr5 66791273 66791404 (114123856) C LTR81B LTR/Gypsy (166) 1227 1092 1345575 320 30.7 5.7 0.7 chr5 66799283 66799423 (114115837) + MamGypLTR1c LTR/Gypsy 648 795 (8) 1345581 431 32.3 8.4 0.4 chr5 66815264 66815490 (114099770) C MamGypLTR1c LTR/Gypsy (501) 302 58 1345607 242 29.9 6.1 1.0 chr5 66902248 66902345 (114012915) C LTR81B LTR/Gypsy (363) 1030 928 1345717 242 13.2 0.0 0.0 chr5 67260984 67261021 (113654239) C MamGypLTR1b LTR/Gypsy (31) 751 714 1346122 335 22.9 7.3 0.0 chr5 67261342 67261437 (113653823) C MamGypLTR1b LTR/Gypsy (58) 724 622 1346122 475 25.7 17.8 5.1 chr5 67261582 67261934 (113653326) C MamGypLTR1b LTR/Gypsy (367) 417 1 1346122 228 31.9 8.6 3.4 chr5 67782107 67782223 (113133037) C LTR81C LTR/Gypsy (902) 251 129 1346930 295 28.6 3.7 1.9 chr5 67784613 67784719 (113130541) C LTR81A LTR/Gypsy (1043) 307 199 1346932 598 32.2 4.7 5.0 chr5 67814113 67814455 (113100805) C LTR81B LTR/Gypsy (554) 839 498 1346979 291 32.8 5.6 0.0 chr5 67815046 67815170 (113100090) C LTR81B LTR/Gypsy (922) 231 100 1346979 693 26.1 18.8 1.2 chr5 68085908 68086163 (112829097) C MamGypLTR1d LTR/Gypsy (0) 813 513 1347304 419 29.2 15.3 7.3 chr5 68209178 68209668 (112705592) C MamGypLTR1a LTR/Gypsy (0) 784 255 1347475 276 26.7 7.2 5.0 chr5 68231978 68232104 (112683156) + MamGypLTR1a LTR/Gypsy 1 134 (669) 1347510 977 30.7 7.5 0.9 chr5 68232218 68232549 (112682711) + MamGypLTR1a LTR/Gypsy 427 780 (4) 1347510 272 35.3 12.8 3.6 chr5 70669821 70670070 (110245190) C MamGypLTR1b LTR/Gypsy (12) 770 498 1351926 407 16.4 9.3 1.7 chr5 70748758 70748875 (110166385) C MamGypLTR1b LTR/Gypsy (12) 770 644 1352041 368 28.4 4.4 3.3 chr5 71059621 71059822 (109855438) + LTR81B LTR/Gypsy 1216 1393 (0) 1352609 483 29.8 3.6 2.0 chr5 71134536 71134730 (109780530) C LTR81C LTR/Gypsy (896) 257 60 1352697 249 24.3 2.8 1.4 chr5 71658995 71659065 (109256195) C LTR81 LTR/Gypsy (224) 965 894 1353404 468 31.2 4.2 10.5 chr5 71659257 71659542 (109255718) C LTR81A LTR/Gypsy (275) 1075 808 1353406 258 32.1 8.6 1.4 chr5 71824388 71824526 (109090734) C MamGypLTR3 LTR/Gypsy (31) 808 660 1353625 281 27.4 1.7 5.8 chr5 71915285 71915404 (108999856) + LTR81B LTR/Gypsy 188 302 (1091) 1353757 273 27.7 12.1 7.7 chr5 71916092 71916298 (108998962) + LTR81B LTR/Gypsy 1026 1241 (152) 1353757 283 28.8 5.4 12.6 chr5 71968876 71969042 (108946218) + MamGypLTR1b LTR/Gypsy 478 632 (150) 1353842 569 30.3 5.6 4.1 chr5 72245510 72245705 (108669555) C MamGypLTR3 LTR/Gypsy (354) 485 287 1354237 421 29.7 12.2 1.6 chr5 73014051 73014348 (107900912) C LTR81B LTR/Gypsy (28) 1365 816 1355425 407 24.9 6.3 13.9 chr5 73015286 73015523 (107899737) C LTR81B LTR/Gypsy (1120) 230 11 1355425 707 27.8 11.1 6.2 chr5 73115931 73116317 (107798943) C LTR81B LTR/Gypsy (11) 1382 977 1355562 228 28.2 7.7 8.2 chr5 73695550 73695719 (107219541) + MamGypLTR1c LTR/Gypsy 28 196 (607) 1356322 387 22.9 7.2 7.1 chr5 73792342 73792455 (107122805) + MamGypLTR2b LTR/Gypsy 2 106 (962) 1356467 401 26.0 6.2 3.4 chr5 73793655 73793833 (107121427) + MamGypLTR2b LTR/Gypsy 670 853 (69) 1356467 385 27.6 6.4 5.4 chr5 73948375 73948577 (106966683) C MamGypLTR1d LTR/Gypsy (43) 770 566 1356677 404 24.2 8.2 2.9 chr5 74211445 74211614 (106703646) C MamGypLTR1b LTR/Gypsy (568) 214 36 1357119 347 37.3 1.7 1.7 chr5 75034892 75035071 (105880189) + MamGyp-int LTR/Gypsy 3362 3541 (1521) 1358380 378 23.8 25.0 0.0 chr5 75051763 75051934 (105863326) C MamGypLTR1c LTR/Gypsy (5) 798 584 1358406 349 30.8 7.3 3.1 chr5 75163121 75163311 (105751949) + MamGypLTR2c LTR/Gypsy 673 871 (197) 1358523 240 32.2 12.0 0.7 chr5 75493045 75493194 (105422066) + MamGypLTR1c LTR/Gypsy 5 171 (632) 1358985 260 31.0 13.9 0.0 chr5 76189042 76189170 (104726090) + MamGypLTR1b LTR/Gypsy 1 147 (656) 1360179 416 22.9 6.4 8.8 chr5 76189381 76189575 (104725685) + MamGypLTR1b LTR/Gypsy 144 331 (472) 1360179 239 28.7 3.9 7.8 chr5 76227416 76227517 (104687743) + LTR81C LTR/Gypsy 257 354 (799) 1360235 304 30.3 5.2 2.2 chr5 78182369 78182503 (102732757) + MamGypLTR1d LTR/Gypsy 648 786 (27) 1363015 332 24.6 3.6 4.3 chr5 78192199 78192361 (102722899) + MamGypLTR2c LTR/Gypsy 759 1055 (13) 1363026 232 29.2 14.6 3.8 chr5 78658113 78658327 (102256933) C MamGypLTR2b LTR/Gypsy (16) 906 640 1363890 232 31.1 16.8 6.4 chr5 78658627 78658740 (102256520) C MamGypLTR2b LTR/Gypsy (283) 639 498 1363890 246 39.5 10.4 3.0 chr5 78658814 78659043 (102256217) C MamGypLTR2b LTR/Gypsy (542) 380 134 1363890 556 28.0 14.7 7.0 chr5 79184376 79184693 (101730567) C LTR81C LTR/Gypsy (13) 1380 876 1364755 1026 30.1 6.5 0.4 chr5 79185147 79185517 (101729743) C LTR81 LTR/Gypsy (363) 1030 505 1364757 624 28.9 10.3 9.7 chr5 79187131 79187585 (101727675) C LTR81 LTR/Gypsy (918) 475 18 1364757 249 24.1 0.0 3.3 chr5 79218812 79218871 (101696389) + MamGypLTR2c LTR/Gypsy 39 96 (972) 1364801 229 35.6 0.9 2.8 chr5 79219694 79219800 (101695460) + MamGypLTR2c LTR/Gypsy 270 374 (548) 1364801 268 35.5 4.2 4.2 chr5 79219922 79220112 (101695148) + MamGypLTR1c LTR/Gypsy 553 743 (60) 1364804 1153 26.1 13.6 11.3 chr5 79258404 79259189 (101656071) + MamGypLTR1d LTR/Gypsy 3 806 (7) 1364863 496 31.2 13.3 0.8 chr5 79385464 79385708 (101529552) C MamGypLTR1d LTR/Gypsy (0) 782 521 1365041 569 29.7 5.6 7.2 chr5 79385825 79385946 (101529314) C MamGypLTR1d LTR/Gypsy (491) 322 221 1365041 569 29.7 5.6 7.2 chr5 79386304 79386499 (101528761) C MamGypLTR1d LTR/Gypsy (593) 220 9 1365041 258 24.6 5.5 7.8 chr5 79399599 79399651 (101515609) C MamGypLTR2b LTR/Gypsy (0) 922 869 1365074 258 24.6 5.5 7.8 chr5 79399942 79400015 (101515245) C MamGypLTR2b LTR/Gypsy (54) 868 798 1365074 351 27.6 16.6 7.4 chr5 79400791 79401257 (101514003) C MamGypLTR1c LTR/Gypsy (248) 534 57 1365077 297 26.5 15.3 0.7 chr5 79682722 79682858 (101232402) C MamGypLTR1a LTR/Gypsy (0) 784 628 1365695 255 28.1 5.6 0.0 chr5 80317110 80317198 (100598062) C LTR81 LTR/Gypsy (0) 1189 1096 1366793 302 27.9 4.3 7.9 chr5 80318517 80318656 (100596604) C LTR81 LTR/Gypsy (1031) 158 24 1366793 228 15.7 6.3 11.4 chr5 80508888 80508966 (100406294) C MamGypLTR2b LTR/Gypsy (163) 759 685 1367033 740 25.5 2.2 12.0 chr5 81138842 81139157 (99776103) C MamGypLTR3 LTR/Gypsy (2) 837 553 1367884 278 19.3 5.9 2.4 chr5 81480189 81480273 (99434987) C MamGypLTR2b LTR/Gypsy (131) 791 704 1368395 714 29.6 18.3 2.2 chr5 81641131 81641637 (99273623) + MamGypLTR1a LTR/Gypsy 16 604 (180) 1368646 352 32.0 3.1 6.1 chr5 81787980 81788082 (99127178) C MamGypLTR1a LTR/Gypsy (0) 784 686 1368846 352 32.0 3.1 6.1 chr5 81788529 81788587 (99126673) C MamGypLTR1a LTR/Gypsy (99) 685 627 1368846 417 31.0 5.4 2.0 chr5 82287532 82287679 (98627581) + MamGypLTR1a LTR/Gypsy 552 704 (80) 1369495 466 32.4 11.8 6.8 chr5 82902602 82903101 (98012159) C MamGypLTR1c LTR/Gypsy (270) 533 9 1370310 271 29.8 12.4 6.0 chr5 83226008 83226225 (97689035) + MamGypLTR2b LTR/Gypsy 581 812 (110) 1370721 339 35.5 2.8 0.7 chr5 83816617 83816758 (97098502) C MamGypLTR3 LTR/Gypsy (136) 703 559 1371504 227 37.5 11.2 3.7 chr5 83816838 83817106 (97098154) C MamGypLTR3 LTR/Gypsy (429) 410 122 1371504 241 26.6 7.6 5.0 chr5 84324707 84324825 (96590435) + MamGypLTR2c LTR/Gypsy 5 126 (942) 1372188 245 23.9 0.0 2.9 chr5 84547291 84547359 (96367901) + MamGypLTR1d LTR/Gypsy 734 800 (13) 1372472 277 28.6 9.4 9.0 chr5 85178753 85178975 (95736285) + LTR81A LTR/Gypsy 110 333 (1017) 1373268 680 34.8 7.7 9.4 chr5 85960729 85961234 (94954026) + MamGypLTR1b LTR/Gypsy 7 480 (302) 1374362 680 34.8 7.7 9.4 chr5 85961515 85961759 (94953501) + MamGypLTR1b LTR/Gypsy 481 745 (37) 1374362 261 28.5 9.1 1.9 chr5 86016290 86016443 (94898817) + MamGypLTR2b LTR/Gypsy 758 922 (0) 1374431 290 31.2 3.6 6.6 chr5 86406303 86406439 (94508821) + MamGypLTR3 LTR/Gypsy 592 724 (115) 1374930 321 31.8 4.4 3.1 chr5 86448215 86448373 (94466887) C MamGypLTR1d LTR/Gypsy (0) 803 643 1374986 275 34.2 9.9 2.7 chr5 86448877 86448987 (94466273) C MamGypLTR1d LTR/Gypsy (421) 382 264 1374986 399 23.6 2.8 0.9 chr5 86449157 86449263 (94465997) C MamGypLTR1d LTR/Gypsy (704) 109 1 1374986 250 31.2 8.7 4.3 chr5 86950767 86950950 (93964310) + LTR81A LTR/Gypsy 1082 1273 (77) 1375678 366 33.6 7.2 6.9 chr5 87059474 87059735 (93855525) C MamGypLTR1b LTR/Gypsy (40) 742 480 1375807 241 33.1 5.6 1.6 chr5 87059761 87059886 (93855374) C MamGypLTR1b LTR/Gypsy (361) 421 291 1375807 771 34.8 11.4 2.2 chr5 87125848 87126311 (93788949) C LTR81C LTR/Gypsy (339) 814 308 1375879 266 31.2 9.0 7.7 chr5 88240465 88240697 (92674563) + MamGypLTR1d LTR/Gypsy 565 800 (13) 1377284 376 23.8 16.4 6.7 chr5 88244268 88244474 (92670786) C LTR81B LTR/Gypsy (153) 1240 1099 1377294 604 25.3 5.4 2.7 chr5 88244967 88245189 (92670071) C LTR81B LTR/Gypsy (961) 432 204 1377294 353 26.1 6.1 3.5 chr5 88245212 88245326 (92669934) C LTR81B LTR/Gypsy (160) 118 1 1377294 250 36.0 1.6 8.8 chr5 88270291 88270540 (92644720) C MamGypLTR3 LTR/Gypsy (0) 839 608 1377329 556 31.1 4.4 1.8 chr5 88778512 88778737 (92136523) C MamGypLTR3 LTR/Gypsy (10) 829 598 1377964 1013 29.1 14.3 3.5 chr5 89309957 89310522 (91604738) + LTR81C LTR/Gypsy 131 758 (395) 1378568 420 26.7 2.4 4.0 chr5 89310572 89310696 (91604564) + LTR81C LTR/Gypsy 960 1082 (71) 1378568 385 23.1 2.8 3.7 chr5 89418929 89419036 (91496224) + LTR81A LTR/Gypsy 1244 1350 (0) 1378685 243 22.0 23.5 0.8 chr5 89675528 89675646 (91239614) C MamGypLTR2c LTR/Gypsy (61) 1007 862 1378988 231 28.9 12.2 12.2 chr5 89675887 89676075 (91239185) C MamGypLTR2c LTR/Gypsy (602) 466 278 1378988 454 26.8 3.7 5.8 chr5 89894478 89894667 (91020593) + MamGypLTR3 LTR/Gypsy 654 839 (0) 1379322 311 23.8 20.8 0.5 chr5 90229592 90229780 (90685480) C MamGypLTR1d LTR/Gypsy (0) 813 570 1379725 488 32.2 17.0 4.5 chr5 90586904 90587412 (90327848) C MamGypLTR2c LTR/Gypsy (3) 1065 494 1380291 488 30.1 30.4 4.4 chr5 90588011 90588352 (90326908) C MamGypLTR2c LTR/Gypsy (575) 493 61 1380291 278 37.4 4.3 4.3 chr5 90771523 90771871 (90143389) C MamGypLTR1b LTR/Gypsy (0) 782 434 1380652 305 30.2 8.5 5.0 chr5 91553869 91554067 (89361193) C MamGypLTR3 LTR/Gypsy (40) 799 594 1381617 728 28.3 11.9 6.2 chr5 91619831 91620233 (89295027) C LTR81C LTR/Gypsy (43) 1110 685 1381680 320 32.1 0.0 0.9 chr5 91620980 91621092 (89294168) C LTR81C LTR/Gypsy (1103) 247 136 1381680 239 18.0 6.2 4.7 chr5 91852034 91852097 (89063163) + LTR81AB LTR/Gypsy 187 251 (27) 1381897 360 29.6 9.9 6.1 chr5 92044947 92045099 (88870161) + MamGypLTR1c LTR/Gypsy 584 747 (56) 1382137 360 29.6 9.9 6.1 chr5 92045398 92045455 (88869805) + MamGypLTR1c LTR/Gypsy 748 803 (0) 1382137 476 25.4 3.5 1.4 chr5 92148825 92148968 (88766292) C MamGypLTR2b LTR/Gypsy (8) 914 768 1382276 247 32.6 4.4 2.2 chr5 92149294 92149384 (88765876) C MamGypLTR2b LTR/Gypsy (535) 387 295 1382276 1080 34.5 10.1 5.5 chr5 92334845 92335949 (88579311) C LTR81A LTR/Gypsy (3) 1347 207 1382479 457 37.1 7.3 8.6 chr5 92587952 92588811 (88326449) C LTR81A LTR/Gypsy (240) 1110 65 1382788 712 33.2 12.2 3.9 chr5 92627664 92628384 (88286876) + MamGypLTR1a LTR/Gypsy 2 783 (1) 1382834 334 30.4 7.7 8.9 chr5 92714224 92714458 (88200802) C MamGypLTR1c LTR/Gypsy (8) 795 564 1382951 226 35.6 8.7 2.7 chr5 92795897 92796046 (88119214) + MamGypLTR1c LTR/Gypsy 329 487 (316) 1383038 278 25.4 4.4 0.0 chr5 92797222 92797322 (88117938) + MamGypLTR1c LTR/Gypsy 695 799 (14) 1383038 367 33.4 4.0 10.6 chr5 93467187 93467598 (87447662) C LTR81C LTR/Gypsy (55) 1013 694 1383805 250 30.4 0.0 1.1 chr5 94431711 94431803 (86483457) + MamGypLTR1a LTR/Gypsy 683 774 (10) 1384992 360 28.1 11.6 7.5 chr5 94630546 94630734 (86284526) C LTR81B LTR/Gypsy (34) 1359 1178 1385247 360 28.1 11.6 7.5 chr5 94631640 94631742 (86283518) C LTR81B LTR/Gypsy (216) 1177 1055 1385247 399 31.5 7.0 1.5 chr5 94632798 94632997 (86282263) + LTR81B LTR/Gypsy 102 312 (1081) 1385252 495 34.9 7.6 5.3 chr5 95173865 95174433 (85740827) + MamGyp-int LTR/Gypsy 464 1045 (4017) 1386029 254 17.5 1.8 0.0 chr5 95176074 95176130 (85739130) + MamGypLTR1b LTR/Gypsy 682 739 (43) 1386031 257 30.8 9.8 3.0 chr5 95416951 95417114 (85498146) + MamGypLTR1c LTR/Gypsy 316 490 (313) 1386394 440 25.5 17.4 0.5 chr5 95627621 95627833 (85287427) C MamGypLTR1c LTR/Gypsy (538) 265 17 1386657 338 34.9 3.5 1.2 chr5 95669907 95670077 (85245183) C MamGypLTR1b LTR/Gypsy (128) 654 480 1386703 289 26.8 2.5 6.7 chr5 95782205 95782324 (85132936) + LTR81A LTR/Gypsy 68 182 (1168) 1386842 448 27.6 5.8 3.4 chr5 95783216 95783421 (85131839) + MamGypLTR2b LTR/Gypsy 661 871 (51) 1386844 766 34.9 11.0 3.5 chr5 95811368 95811959 (85103301) + LTR81C LTR/Gypsy 518 1153 (0) 1386884 327 33.9 7.6 7.1 chr5 95847245 95847625 (85067635) C LTR81A LTR/Gypsy (552) 798 416 1386930 249 34.9 4.5 9.2 chr5 95859836 95860327 (85054933) + MamGypLTR1b LTR/Gypsy 1 469 (313) 1386958 482 24.1 3.4 0.8 chr5 96159226 96159342 (84755918) C MamGypLTR1a LTR/Gypsy (3) 781 662 1387415 263 29.1 2.6 3.5 chr5 96907320 96907433 (84007827) C LTR81B LTR/Gypsy (1243) 150 38 1388382 924 33.0 11.5 6.7 chr5 96922496 96923341 (83991919) + MamGypLTR2c LTR/Gypsy 87 972 (96) 1388403 375 24.5 9.2 0.0 chr5 96942762 96942859 (83972401) + MamGypLTR2b LTR/Gypsy 742 848 (74) 1388421 343 33.0 9.6 6.5 chr5 97024790 97025113 (83890147) + MamGypLTR1c LTR/Gypsy 56 389 (414) 1388518 252 40.8 4.5 2.2 chr5 97052927 97053104 (83862156) + MamGypLTR2b LTR/Gypsy 153 334 (588) 1388541 312 33.5 5.3 3.0 chr5 97134790 97134958 (83780302) + MamGypLTR3 LTR/Gypsy 667 839 (0) 1388637 572 23.2 9.5 0.0 chr5 98298814 98298992 (82616268) + LTR81AB LTR/Gypsy 94 292 (1058) 1390087 241 25.4 3.0 0.0 chr5 98300491 98300557 (82614703) + LTR81AB LTR/Gypsy 1079 1147 (6) 1390087 241 22.6 3.2 0.0 chr5 98358324 98358385 (82556875) + MamGypLTR1b LTR/Gypsy 698 761 (21) 1390186 239 29.7 3.5 1.8 chr5 98399407 98399519 (82515741) C MamGypLTR2b LTR/Gypsy (24) 898 784 1390248 247 29.7 6.0 12.9 chr5 98472378 98472609 (82442651) C LTR81AB LTR/Gypsy (106) 1047 832 1390365 351 23.5 2.5 2.5 chr5 98473332 98473449 (82441811) C LTR81AB LTR/Gypsy (158) 120 3 1390365 307 31.5 12.2 5.7 chr5 98527811 98527950 (82387310) + MamGypLTR1d LTR/Gypsy 44 187 (626) 1390423 307 31.5 12.2 5.7 chr5 98528250 98528404 (82386856) + MamGypLTR1d LTR/Gypsy 188 358 (455) 1390423 255 32.4 3.3 8.0 chr5 98595975 98596125 (82319135) + MamGypLTR2c LTR/Gypsy 214 357 (711) 1390464 315 21.4 6.7 1.1 chr5 98624469 98624558 (82290702) C MamGypLTR2b LTR/Gypsy (37) 885 791 1390508 363 25.9 7.9 0.7 chr5 98736886 98737025 (82178235) + LTR81B LTR/Gypsy 1238 1387 (6) 1390645 403 27.2 7.7 7.2 chr5 98765171 98765364 (82149896) + MamGypLTR1c LTR/Gypsy 3 197 (606) 1390693 346 27.2 7.7 7.2 chr5 99671789 99671982 (81243278) C MamGypLTR1c LTR/Gypsy (606) 197 3 1391909 325 25.9 7.9 0.7 chr5 99699675 99699814 (81215446) C LTR81B LTR/Gypsy (6) 1387 1238 1391961 268 32.7 6.6 2.6 chr5 99914881 99915031 (81000229) C MamGypLTR2c LTR/Gypsy (107) 961 805 1392263 305 25.6 1.3 1.3 chr5 99916456 99916534 (80998726) C MamGypLTR2c LTR/Gypsy (308) 760 682 1392263 357 34.1 2.8 9.8 chr5 100028947 100029232 (80886028) C LTR81A LTR/Gypsy (136) 1214 949 1392415 264 29.4 1.8 1.8 chr5 100304255 100304365 (80610895) C MamGypLTR2c LTR/Gypsy (899) 169 59 1392746 270 31.2 8.7 5.0 chr5 100429250 100429526 (80485734) C LTR81B LTR/Gypsy (1106) 287 1 1392874 400 32.6 4.0 2.7 chr5 101075237 101075384 (79839876) + LTR81B LTR/Gypsy 11 160 (993) 1393661 417 32.4 7.0 2.7 chr5 101075776 101075962 (79839298) + LTR81B LTR/Gypsy 953 1147 (246) 1393661 750 35.7 12.0 3.6 chr5 101521279 101521628 (79393632) + LTR81C LTR/Gypsy 7 403 (750) 1394226 750 35.7 12.0 3.6 chr5 101521843 101522375 (79392885) + LTR81C LTR/Gypsy 404 964 (189) 1394226 252 34.0 2.0 2.0 chr5 101533989 101534138 (79381122) + MamGypLTR1a LTR/Gypsy 59 208 (576) 1394232 285 30.0 5.5 3.5 chr5 101844211 101844355 (79070905) C MamGypLTR1c LTR/Gypsy (615) 188 41 1394623 363 28.3 8.1 10.8 chr5 101962486 101962818 (78952442) C LTR81B LTR/Gypsy (22) 1371 1048 1394786 667 22.6 15.3 0.5 chr5 101963590 101963811 (78951449) C LTR81B LTR/Gypsy (1130) 263 9 1394786 328 21.6 5.2 0.0 chr5 102186028 102186104 (78729156) C LTR81B LTR/Gypsy (65) 1328 1255 1395087 354 27.1 8.4 4.5 chr5 102228610 102228787 (78686473) C LTR81C LTR/Gypsy (0) 1153 969 1395155 330 29.2 2.5 3.2 chr5 102228984 102229116 (78686144) C LTR81C LTR/Gypsy (954) 199 68 1395155 466 25.8 1.2 7.7 chr5 102373247 102373414 (78541846) C MamGypLTR3 LTR/Gypsy (0) 839 683 1395337 287 17.0 0.0 0.0 chr5 102373532 102373578 (78541682) C MamGypLTR3 LTR/Gypsy (240) 599 553 1395337 563 28.7 13.3 5.0 chr5 102373683 102373983 (78541277) C MamGypLTR3 LTR/Gypsy (442) 397 72 1395337 609 23.6 25.8 4.6 chr5 102591087 102591392 (78323868) + MamGypLTR1d LTR/Gypsy 1 371 (442) 1395645 288 17.0 0.0 0.0 chr5 102592236 102592288 (78322972) + MamGypLTR1d LTR/Gypsy 732 784 (19) 1395645 431 31.0 8.5 5.7 chr5 102686399 102686644 (78228616) + MamGypLTR1d LTR/Gypsy 551 803 (10) 1395768 237 33.8 0.0 1.4 chr5 102942182 102942250 (77973010) + MamGypLTR1a LTR/Gypsy 285 352 (432) 1396105 226 25.3 21.1 0.0 chr5 102969331 102969425 (77945835) C MamGypLTR2c LTR/Gypsy (19) 1049 935 1396150 397 35.7 7.4 3.5 chr5 103035651 103035961 (77879299) C MamGypLTR2c LTR/Gypsy (551) 517 195 1396240 692 32.7 16.7 5.7 chr5 103070967 103071631 (77843629) + MamGypLTR1a LTR/Gypsy 27 764 (20) 1396295 260 27.5 0.9 6.0 chr5 103162028 103162143 (77753117) + LTR81A LTR/Gypsy 131 240 (1110) 1396430 562 26.7 6.9 1.1 chr5 103162181 103162369 (77752891) + MamGypLTR2c LTR/Gypsy 23 222 (846) 1396431 331 24.7 3.1 11.5 chr5 103162846 103163037 (77752223) + MamGypLTR2c LTR/Gypsy 838 1013 (55) 1396431 501 35.2 17.9 2.8 chr5 103176638 103177139 (77738121) C MamGypLTR1c LTR/Gypsy (164) 639 62 1396456 266 28.2 6.8 8.6 chr5 103219957 103220119 (77695141) + MamGypLTR2b LTR/Gypsy 70 229 (693) 1396520 328 22.9 7.7 4.4 chr5 103220455 103220652 (77694608) + MamGypLTR2b LTR/Gypsy 608 905 (17) 1396520 269 35.7 0.0 2.3 chr5 103884464 103884549 (77030711) C MamGypLTR2b LTR/Gypsy (701) 221 138 1397311 268 35.1 17.1 1.1 chr5 104409773 104409948 (76505312) + LTR81 LTR/Gypsy 772 975 (418) 1397924 382 24.1 4.8 0.0 chr5 104410260 104410342 (76504918) + LTR81 LTR/Gypsy 1102 1188 (1) 1397924 418 31.5 8.0 1.8 chr5 105361958 105362183 (75553077) + LTR81B LTR/Gypsy 152 391 (1002) 1399183 301 28.2 18.2 1.1 chr5 105362969 105363144 (75552116) + LTR81B LTR/Gypsy 974 1179 (10) 1399183 256 25.8 5.8 6.7 chr5 105448450 105448553 (75466707) C MamGypLTR2c LTR/Gypsy (29) 1039 937 1399299 338 30.5 4.7 9.4 chr5 105648455 105648624 (75266636) + MamGypLTR1c LTR/Gypsy 619 780 (23) 1399584 300 38.7 9.2 0.0 chr5 105727157 105727373 (75187887) + MamGyp-int LTR/Gypsy 4481 4717 (345) 1399707 275 36.2 10.0 2.9 chr5 106340551 106340789 (74574471) + MamGypLTR3 LTR/Gypsy 535 790 (49) 1400438 402 37.3 5.1 1.4 chr5 106428456 106428670 (74486590) C MamGypLTR1a LTR/Gypsy (156) 628 406 1400546 252 24.2 1.5 1.5 chr5 107077527 107077593 (73837667) C MamGypLTR1b LTR/Gypsy (72) 710 644 1401330 297 26.3 10.0 10.4 chr5 107166131 107166389 (73748871) + MamGypLTR1d LTR/Gypsy 75 332 (481) 1401444 622 33.3 2.3 0.8 chr5 107783437 107783702 (73131558) + MamGypLTR3 LTR/Gypsy 235 504 (335) 1402260 413 30.9 3.6 7.3 chr5 107784909 107785156 (73130104) + MamGypLTR3 LTR/Gypsy 601 839 (0) 1402260 400 28.6 7.1 2.0 chr5 107796790 107796985 (73118275) C LTR81C LTR/Gypsy (88) 1065 860 1402278 259 32.1 13.4 1.4 chr5 107797116 107797257 (73118003) C LTR81C LTR/Gypsy (487) 702 544 1402278 486 30.8 5.1 8.6 chr5 107898629 107899237 (73016023) C MamGypLTR2c LTR/Gypsy (30) 1038 519 1402412 258 33.7 3.5 0.9 chr5 108015394 108015538 (72899722) + MamGypLTR1c LTR/Gypsy 522 689 (114) 1402571 256 29.5 7.8 1.4 chr5 108022183 108022351 (72892909) C MamGypLTR1d LTR/Gypsy (190) 594 430 1402578 284 25.4 3.2 0.0 chr5 108572849 108572911 (72342349) C MamGypLTR1c LTR/Gypsy (79) 724 660 1403363 513 31.2 5.8 3.0 chr5 109217616 109218021 (71697239) + LTR81A LTR/Gypsy 7 433 (917) 1404188 368 31.3 12.3 4.4 chr5 109218142 109218488 (71696772) + LTR81A LTR/Gypsy 416 1009 (341) 1404188 713 35.3 11.4 4.5 chr5 109279694 109280431 (71634829) C MamGypLTR1c LTR/Gypsy (10) 793 5 1404272 263 22.2 0.0 0.0 chr5 109324760 109324813 (71590447) C MamGypLTR1c LTR/Gypsy (58) 745 692 1404334 297 29.5 2.4 4.9 chr5 109396046 109396209 (71519051) C MamGypLTR2c LTR/Gypsy (821) 247 88 1404429 286 26.3 7.3 1.8 chr5 109570889 109571012 (71344248) + MamGypLTR1c LTR/Gypsy 73 202 (611) 1404587 574 27.1 8.6 3.6 chr5 109628028 109628155 (71287105) + MamGypLTR1a LTR/Gypsy 1 142 (642) 1404651 574 27.1 8.6 3.6 chr5 109628497 109628589 (71286671) + MamGypLTR1a LTR/Gypsy 143 233 (551) 1404651 238 23.2 5.4 0.0 chr5 109628641 109628696 (71286564) + MamGypLTR1a LTR/Gypsy 608 666 (118) 1404651 330 24.8 2.5 5.8 chr5 109746112 109746231 (71169029) C LTR81B LTR/Gypsy (3) 1390 1275 1404792 246 37.7 11.4 2.6 chr5 109746678 109747020 (71168240) C LTR81A LTR/Gypsy (579) 771 399 1404794 226 18.6 0.0 13.6 chr5 109747643 109747723 (71167537) C LTR81AB LTR/Gypsy (208) 70 1 1404796 492 35.7 9.0 4.2 chr5 109750191 109750670 (71164590) C LTR81B LTR/Gypsy (12) 1381 879 1404801 409 33.6 13.0 5.3 chr5 109750707 109750891 (71164369) C LTR81B LTR/Gypsy (738) 655 464 1404801 409 33.6 13.0 5.3 chr5 109751188 109751362 (71163898) C LTR81B LTR/Gypsy (930) 463 267 1404801 293 34.0 6.0 5.4 chr5 110024177 110024344 (70890916) + MamGypLTR1a LTR/Gypsy 370 538 (265) 1405139 367 31.5 8.9 1.8 chr5 110024891 110025058 (70890202) + MamGypLTR1a LTR/Gypsy 603 782 (2) 1405139 254 17.3 3.8 1.9 chr5 110468500 110468552 (70446708) + LTR81AB LTR/Gypsy 68 121 (157) 1405618 277 23.6 9.3 4.7 chr5 110469423 110469551 (70445709) + LTR81C LTR/Gypsy 957 1091 (62) 1405620 384 28.2 11.5 1.2 chr5 110504604 110504768 (70410492) + LTR81A LTR/Gypsy 53 234 (1116) 1405686 267 28.7 4.0 1.6 chr5 110530104 110530227 (70385033) C LTR81B LTR/Gypsy (1127) 266 140 1405730 1612 31.3 11.4 4.2 chr5 110604971 110605915 (70309345) C LTR81C LTR/Gypsy (140) 1013 1 1405830 360 22.6 9.7 12.6 chr5 110695725 110695993 (70219267) C LTR81C LTR/Gypsy (14) 1139 879 1405941 270 29.6 8.2 0.0 chr5 110870141 110870238 (70045022) + MamGypLTR1d LTR/Gypsy 28 133 (680) 1406184 392 29.5 9.7 4.4 chr5 110940344 110940591 (69974669) C MamGypLTR1a LTR/Gypsy (519) 265 5 1406250 689 34.1 15.4 0.7 chr5 111008549 111009092 (69906168) + MamGypLTR1a LTR/Gypsy 152 775 (9) 1406331 342 25.3 14.8 7.5 chr5 111172559 111172836 (69742424) + MamGypLTR2c LTR/Gypsy 760 1057 (11) 1406544 304 33.7 4.4 1.1 chr5 111270950 111271129 (69644131) + MamGypLTR1c LTR/Gypsy 398 583 (220) 1406671 404 29.1 8.4 9.5 chr5 111422828 111423123 (69492137) + MamGypLTR1b LTR/Gypsy 1 293 (489) 1406865 372 32.1 6.7 1.6 chr5 111423325 111423517 (69491743) + MamGypLTR1b LTR/Gypsy 542 744 (38) 1406865 293 30.6 16.3 4.3 chr5 111463399 111463699 (69451561) C MamGypLTR1d LTR/Gypsy (306) 507 171 1406916 304 28.4 8.8 0.0 chr5 111463714 111463815 (69451445) C MamGypLTR1d LTR/Gypsy (674) 139 29 1406916 284 31.9 3.9 6.1 chr5 111464543 111464722 (69450538) C MamGyp-int LTR/Gypsy (3590) 1472 1297 1406917 554 35.4 5.7 7.1 chr5 111465215 111465707 (69449553) C MamGypLTR1c LTR/Gypsy (0) 803 318 1406918 238 25.0 4.4 4.4 chr5 111568199 111568311 (69346949) + MamGypLTR1b LTR/Gypsy 662 774 (8) 1407066 356 28.3 0.0 1.1 chr5 111915310 111915402 (68999858) + MamGyp-int LTR/Gypsy 4375 4466 (596) 1407504 662 30.0 21.5 4.8 chr5 111934230 111934993 (68980267) C MamGypLTR2b LTR/Gypsy (29) 893 3 1407522 523 27.3 1.0 4.0 chr5 112025491 112025692 (68889568) C MamGypLTR2c LTR/Gypsy (10) 1058 863 1407663 302 23.8 3.5 14.7 chr5 112723089 112723285 (68191975) + LTR81A LTR/Gypsy 78 252 (1098) 1408707 240 25.3 11.4 0.0 chr5 112724836 112724914 (68190346) + LTR81A LTR/Gypsy 226 313 (1080) 1408707 610 33.0 5.2 8.3 chr5 112846941 112847327 (68067933) C MamGypLTR1d LTR/Gypsy (122) 691 317 1408880 761 27.9 3.6 4.3 chr5 112989323 112989603 (67925657) + LTR81B LTR/Gypsy 35 313 (1080) 1409084 417 28.3 6.9 0.5 chr5 112992303 112992490 (67922770) + LTR81B LTR/Gypsy 1182 1381 (12) 1409089 722 27.9 5.6 3.9 chr5 113009009 113009363 (67905897) + LTR81B LTR/Gypsy 8 368 (1025) 1409113 1009 34.0 7.1 6.0 chr5 113011939 113012768 (67902492) + LTR81B LTR/Gypsy 533 1371 (22) 1409113 267 31.2 1.0 1.0 chr5 113470474 113470570 (67444690) C LTR81A LTR/Gypsy (1223) 127 31 1409728 237 28.2 6.2 2.5 chr5 113557810 113557889 (67357371) + MamGypLTR1c LTR/Gypsy 108 190 (613) 1409830 325 33.8 10.3 0.7 chr5 113557961 113558106 (67357154) + MamGypLTR1c LTR/Gypsy 382 541 (262) 1409830 274 29.0 17.6 2.8 chr5 113635465 113635606 (67279654) C MamGypLTR2c LTR/Gypsy (504) 564 402 1409939 326 26.1 4.6 2.5 chr5 113635795 113636003 (67279257) C MamGypLTR2c LTR/Gypsy (1014) 336 26 1409939 234 34.5 4.3 2.2 chr5 113854699 113854790 (67060470) + MamGypLTR2b LTR/Gypsy 134 227 (695) 1410175 482 27.6 9.0 6.9 chr5 114281986 114282331 (66632929) + LTR81A LTR/Gypsy 7 359 (991) 1410592 274 35.9 4.8 1.7 chr5 114294068 114294356 (66620904) + MamGypLTR1b LTR/Gypsy 479 776 (6) 1410605 309 25.3 3.2 6.4 chr5 114320806 114320961 (66594299) C MamGypLTR2b LTR/Gypsy (0) 922 772 1410645 308 27.4 21.4 7.1 chr5 114337421 114337742 (66577518) C MamGypLTR2b LTR/Gypsy (0) 922 555 1410656 452 23.9 34.9 0.3 chr5 114537788 114538102 (66377158) + LTR81A LTR/Gypsy 8 431 (919) 1410909 226 25.0 0.0 0.0 chr5 114538133 114538180 (66377080) + LTR81C LTR/Gypsy 317 364 (789) 1410910 226 30.1 9.6 2.0 chr5 114539113 114539258 (66376002) + LTR81A LTR/Gypsy 548 704 (646) 1410909 389 23.3 26.6 0.6 chr5 114539345 114539521 (66375739) + LTR81A LTR/Gypsy 771 993 (357) 1410909 331 25.6 6.1 0.0 chr5 114764396 114764477 (66150783) C MamGypLTR1c LTR/Gypsy (28) 775 689 1411251 342 27.4 8.5 12.2 chr5 114975403 114975567 (65939693) C LTR81C LTR/Gypsy (0) 1153 1000 1411552 342 27.4 8.5 12.2 chr5 114975856 114975911 (65939349) C LTR81C LTR/Gypsy (154) 999 958 1411552 342 27.4 8.5 12.2 chr5 114975963 114976117 (65939143) C LTR81C LTR/Gypsy (196) 957 791 1411552 568 27.6 7.7 2.7 chr5 115250283 115250502 (65664758) C MamGypLTR1b LTR/Gypsy (0) 782 552 1411922 554 25.1 7.3 1.7 chr5 115693082 115693259 (65222001) + MamGypLTR1a LTR/Gypsy 6 193 (591) 1412470 371 34.9 9.0 5.3 chr5 115693804 115694160 (65221100) + MamGypLTR1a LTR/Gypsy 357 726 (56) 1412470 860 32.4 8.8 6.5 chr5 115940963 115941740 (64973520) C MamGypLTR1c LTR/Gypsy (0) 803 7 1412764 250 20.0 15.7 2.0 chr5 116377392 116377493 (64537767) + LTR81B LTR/Gypsy 1278 1393 (0) 1413478 344 31.9 9.4 6.9 chr5 116520905 116521290 (64393970) C LTR81 LTR/Gypsy (740) 610 218 1413683 251 29.2 13.0 4.9 chr5 117147546 117147768 (63767492) + LTR81A LTR/Gypsy 177 417 (933) 1414532 595 28.8 4.2 1.7 chr5 117293662 117293898 (63621362) C MamGypLTR2c LTR/Gypsy (0) 1068 826 1414722 270 31.2 1.0 3.1 chr5 117482850 117482945 (63432315) C MamGypLTR2b LTR/Gypsy (822) 100 7 1414951 273 22.6 1.6 0.0 chr5 117805489 117805550 (63109710) + MamGypLTR1d LTR/Gypsy 691 753 (60) 1415319 495 29.1 5.9 5.0 chr5 117811630 117811850 (63103410) + MamGypLTR3 LTR/Gypsy 583 805 (34) 1415333 276 17.5 4.8 0.0 chr5 117841749 117841811 (63073449) + LTR81A LTR/Gypsy 1111 1176 (174) 1415366 1612 32.3 9.3 3.3 chr5 117843323 117844243 (63071017) + LTR81C LTR/Gypsy 146 1122 (31) 1415370 355 30.8 10.8 6.5 chr5 117921504 117921856 (62993404) C MamGypLTR2c LTR/Gypsy (165) 903 529 1415476 355 30.8 10.8 6.5 chr5 117922233 117922405 (62992855) C MamGypLTR2c LTR/Gypsy (540) 528 354 1415476 226 26.6 9.0 4.5 chr5 117947435 117947501 (62967759) C MamGypLTR1c LTR/Gypsy (421) 382 313 1415515 332 33.7 4.5 4.5 chr5 117964537 117964738 (62950522) + LTR81 LTR/Gypsy 93 294 (895) 1415539 526 23.4 14.7 9.1 chr5 117965233 117965552 (62949708) + LTR81B LTR/Gypsy 1008 1345 (48) 1415540 399 30.5 2.3 7.4 chr5 118130389 118130604 (62784656) + LTR81A LTR/Gypsy 1130 1334 (16) 1415741 258 26.6 18.9 1.8 chr5 118326546 118326656 (62588604) + MamGypLTR1a LTR/Gypsy 2 131 (653) 1416058 378 24.8 5.8 2.5 chr5 118326712 118326831 (62588429) + MamGypLTR1a LTR/Gypsy 623 746 (38) 1416058 568 25.1 2.2 4.5 chr5 118964905 118965083 (61950177) C MamGypLTR1c LTR/Gypsy (628) 175 1 1417007 268 11.9 0.0 0.0 chr5 119388803 119388844 (61526416) + LTR81C LTR/Gypsy 1063 1104 (49) 1417498 391 24.2 8.1 0.0 chr5 119472887 119472985 (61442275) C MamGypLTR1b LTR/Gypsy (41) 741 635 1417614 236 35.6 7.1 10.6 chr5 120473659 120473941 (60441319) + MamGypLTR3 LTR/Gypsy 558 830 (9) 1418815 265 23.8 15.7 3.4 chr5 120524839 120525016 (60390244) C LTR81B LTR/Gypsy (43) 1350 1151 1418883 254 20.8 20.8 0.0 chr5 120656307 120656383 (60258877) + LTR81 LTR/Gypsy 1082 1174 (15) 1419043 240 20.7 5.2 0.0 chr5 120656408 120656465 (60258795) C LTR81A LTR/Gypsy (1265) 85 25 1419044 949 34.6 11.1 4.5 chr5 120931940 120932407 (59982853) + LTR81C LTR/Gypsy 98 588 (565) 1419392 949 34.6 11.1 4.5 chr5 120932867 120933020 (59982240) + LTR81C LTR/Gypsy 589 745 (408) 1419392 949 34.6 11.1 4.5 chr5 120933531 120933840 (59981420) + LTR81C LTR/Gypsy 746 1093 (60) 1419392 309 21.7 16.1 2.6 chr5 121102024 121102198 (59813062) + LTR81A LTR/Gypsy 105 301 (1092) 1419593 372 32.5 20.0 5.0 chr5 121102676 121103035 (59812225) + LTR81B LTR/Gypsy 978 1391 (2) 1419594 245 24.5 22.4 0.7 chr5 121437997 121438148 (59477112) + MamGypLTR2b LTR/Gypsy 662 846 (76) 1420007 496 30.4 10.2 6.5 chr5 121443026 121443640 (59471620) C MamGypLTR2c LTR/Gypsy (7) 1061 424 1420021 313 35.5 6.3 5.1 chr5 121443720 121444191 (59471069) C LTR81AB LTR/Gypsy (780) 570 86 1420022 318 23.7 2.6 8.6 chr5 121781524 121781675 (59133585) C MamGypLTR1a LTR/Gypsy (480) 304 162 1420396 640 26.7 13.9 1.9 chr5 121789888 121790211 (59125049) C MamGypLTR1b LTR/Gypsy (0) 782 420 1420410 683 25.7 9.6 2.8 chr5 121905643 121905966 (59009294) C LTR81B LTR/Gypsy (1047) 346 1 1420571 552 26.6 6.8 4.2 chr5 122404541 122404732 (58510528) + MamGypLTR1c LTR/Gypsy 1 197 (606) 1421361 287 21.7 1.7 0.0 chr5 122405306 122405365 (58509895) + MamGypLTR1c LTR/Gypsy 753 813 (0) 1421361 447 28.6 6.0 2.3 chr5 122557996 122558213 (58357047) C MamGypLTR1c LTR/Gypsy (7) 796 571 1421555 707 31.5 8.4 2.0 chr5 122558255 122558601 (58356659) C MamGypLTR1c LTR/Gypsy (400) 403 35 1421555 546 28.8 9.2 0.8 chr5 122764782 122765019 (58150241) + MamGypLTR1b LTR/Gypsy 515 772 (10) 1421824 557 31.8 5.6 0.5 chr5 122997635 122997849 (57917411) C MamGypLTR1b LTR/Gypsy (4) 778 553 1422155 234 36.1 17.1 0.8 chr5 123034342 123034464 (57880796) C MamGypLTR2c LTR/Gypsy (529) 539 397 1422195 762 29.6 4.7 3.0 chr5 123109876 123110175 (57805085) + LTR81A LTR/Gypsy 1 305 (1045) 1422274 355 26.7 3.8 9.6 chr5 123657551 123657790 (57257470) C MamGypLTR2c LTR/Gypsy (0) 1068 843 1422937 609 29.2 10.6 4.5 chr5 123840499 123840828 (57074432) + LTR81B LTR/Gypsy 1041 1390 (3) 1423136 590 31.5 1.1 2.1 chr5 123863789 123863976 (57051284) + MamGypLTR1b LTR/Gypsy 595 780 (2) 1423163 529 25.3 10.6 5.1 chr5 123927978 123928269 (56986991) C LTR81B LTR/Gypsy (1085) 308 1 1423243 285 28.5 11.2 0.7 chr5 124382700 124382851 (56532409) + MamGypLTR2c LTR/Gypsy 426 593 (475) 1423896 290 30.0 8.0 1.2 chr5 124387182 124387343 (56527917) C MamGypLTR2c LTR/Gypsy (36) 1032 860 1423901 509 21.4 8.9 8.0 chr5 124388733 124388945 (56526315) + MamGypLTR2c LTR/Gypsy 841 1055 (13) 1423906 270 44.1 0.7 0.0 chr5 124389021 124389156 (56526104) C MamGypLTR2c LTR/Gypsy (790) 278 142 1423907 360 34.4 4.1 4.1 chr5 124389189 124389358 (56525902) C MamGypLTR2c LTR/Gypsy (895) 173 4 1423907 384 24.4 10.8 1.1 chr5 124418556 124418724 (56496536) C LTR81A LTR/Gypsy (1195) 198 11 1423939 345 27.0 11.2 0.0 chr5 124423616 124423767 (56491493) + MamGypLTR1b LTR/Gypsy 10 178 (604) 1423948 328 27.2 12.1 5.8 chr5 124436000 124436206 (56479054) + LTR81AB LTR/Gypsy 1 220 (58) 1423959 842 33.1 3.0 3.6 chr5 124436248 124436576 (56478684) C LTR81C LTR/Gypsy (339) 814 488 1423960 291 33.6 13.1 5.5 chr5 124473071 124473413 (56441847) C MamGypLTR2c LTR/Gypsy (29) 1039 671 1424016 382 32.0 5.5 3.5 chr5 124473954 124474154 (56441106) C MamGypLTR2c LTR/Gypsy (834) 234 30 1424016 486 27.8 3.5 1.7 chr5 124557955 124558126 (56357134) + MamGypLTR1b LTR/Gypsy 367 541 (241) 1424121 247 25.3 2.4 2.4 chr5 124559736 124559820 (56355440) C MamGypLTR1a LTR/Gypsy (4) 780 696 1424122 241 22.7 1.1 5.4 chr5 124627018 124627110 (56288150) + LTR81A LTR/Gypsy 1262 1350 (0) 1424195 230 20.4 1.2 5.1 chr5 124628106 124628197 (56287063) + LTR81A LTR/Gypsy 1262 1337 (13) 1424196 437 27.3 4.8 7.4 chr5 124940736 124941008 (55974252) + MamGypLTR2c LTR/Gypsy 677 1064 (4) 1424569 247 27.6 5.6 2.2 chr5 125115793 125115881 (55799379) C LTR81C LTR/Gypsy (511) 642 551 1424771 416 24.5 9.5 12.0 chr5 125215813 125216128 (55699132) C LTR81A LTR/Gypsy (1039) 311 4 1424882 361 23.3 13.2 4.4 chr5 125443437 125443696 (55471564) + LTR81B LTR/Gypsy 878 1386 (7) 1425128 382 30.0 19.4 3.2 chr5 125471229 125471445 (55443815) + MamGypLTR1b LTR/Gypsy 341 592 (190) 1425157 356 24.3 9.7 2.8 chr5 125472996 125473139 (55442121) + MamGypLTR1b LTR/Gypsy 589 742 (40) 1425157 235 34.3 10.0 6.1 chr5 126522224 126522453 (54392807) + MamGypLTR3 LTR/Gypsy 261 499 (340) 1426787 755 31.9 11.6 3.5 chr5 126568784 126569264 (54345996) C MamGypLTR1b LTR/Gypsy (256) 526 7 1426837 556 24.3 6.1 4.4 chr5 126572660 126572887 (54342373) + MamGypLTR2c LTR/Gypsy 834 1065 (3) 1426843 275 24.3 2.8 2.8 chr5 126594989 126595060 (54320200) C MamGypLTR2b LTR/Gypsy (47) 875 804 1426876 329 31.0 17.4 4.2 chr5 126595135 126595444 (54319816) C MamGypLTR2b LTR/Gypsy (275) 647 297 1426876 267 27.8 15.7 5.8 chr5 126598221 126598411 (54316849) C MamGypLTR2b LTR/Gypsy (683) 239 30 1426876 271 21.5 9.1 12.3 chr5 126961686 126961923 (53953337) C MamGypLTR2b LTR/Gypsy (167) 901 688 1427344 252 33.7 9.1 2.5 chr5 127102669 127102866 (53812394) + MamGypLTR1b LTR/Gypsy 165 375 (407) 1427495 306 19.5 6.1 0.0 chr5 127103063 127103144 (53812116) + MamGypLTR1c LTR/Gypsy 702 788 (15) 1427496 238 25.4 6.7 7.6 chr5 127146453 127146571 (53768689) C MamGypLTR1b LTR/Gypsy (61) 721 604 1427557 312 27.0 3.5 0.0 chr5 127244468 127244582 (53670678) + LTR81AB LTR/Gypsy 124 242 (36) 1427694 247 29.4 3.9 1.0 chr5 127245005 127245107 (53670153) + LTR81AB LTR/Gypsy 977 1082 (71) 1427694 236 15.7 0.0 3.8 chr5 127292948 127293000 (53622260) C MamGypLTR2c LTR/Gypsy (319) 749 699 1427765 305 30.0 2.2 1.1 chr5 127327824 127327914 (53587346) + MamGypLTR3 LTR/Gypsy 18 109 (730) 1427814 484 30.8 11.4 7.7 chr5 127328077 127328322 (53586938) + MamGypLTR3 LTR/Gypsy 437 691 (148) 1427814 268 30.4 11.9 11.3 chr5 127553340 127554224 (53361036) + MamGypLTR2c LTR/Gypsy 5 892 (30) 1428117 729 32.0 8.8 8.7 chr5 127950673 127951294 (52963966) + MamGypLTR1b LTR/Gypsy 7 629 (153) 1428556 400 18.6 9.1 2.0 chr5 127951488 127951586 (52963674) + MamGypLTR1b LTR/Gypsy 638 743 (41) 1428556 233 31.0 6.2 2.1 chr5 128196858 128196921 (52718339) C MamGypLTR3 LTR/Gypsy (0) 839 775 1428856 233 31.0 6.2 2.1 chr5 128197231 128197310 (52717950) C MamGypLTR3 LTR/Gypsy (65) 774 690 1428856 251 24.5 13.2 0.0 chr5 128529538 128529643 (52385617) + LTR81B LTR/Gypsy 1243 1362 (31) 1429247 535 35.1 12.9 3.0 chr5 128615545 128616059 (52299201) + MamGypLTR1c LTR/Gypsy 231 793 (10) 1429352 564 27.7 5.9 0.4 chr5 128676978 128677213 (52238047) + LTR81A LTR/Gypsy 3 251 (1099) 1429405 375 34.0 8.2 5.3 chr5 128677384 128677591 (52237669) + LTR81A LTR/Gypsy 377 590 (563) 1429405 276 36.4 5.8 0.4 chr5 128713015 128713240 (52202020) C LTR81A LTR/Gypsy (44) 1306 1069 1429442 263 28.9 9.3 0.8 chr5 128912141 128912269 (52002991) C LTR81C LTR/Gypsy (41) 1112 973 1429711 367 28.3 7.0 4.8 chr5 129031584 129031813 (51883447) C LTR81A LTR/Gypsy (15) 1138 904 1429860 226 24.5 2.0 0.0 chr5 129031836 129031884 (51883376) C LTR81A LTR/Gypsy (1055) 295 246 1429860 452 27.4 3.9 6.2 chr5 129033079 129033223 (51882037) C LTR81A LTR/Gypsy (1189) 161 21 1429860 234 24.8 6.9 7.6 chr5 129146384 129146514 (51768746) C MamGypLTR2b LTR/Gypsy (17) 905 776 1429987 1018 27.7 7.0 5.5 chr5 129213952 129214421 (51700839) + LTR81A LTR/Gypsy 1 477 (873) 1430067 803 33.1 6.2 2.8 chr5 129217421 129218123 (51697137) C MamGypLTR1a LTR/Gypsy (10) 774 1 1430075 491 26.8 7.0 3.0 chr5 129541355 129541554 (51373706) C MamGypLTR2c LTR/Gypsy (29) 1039 832 1430486 338 31.5 1.1 0.0 chr5 129541793 129541884 (51373376) C MamGypLTR2c LTR/Gypsy (547) 521 429 1430486 245 25.0 6.2 1.2 chr5 130045048 130045128 (50870132) + MamGypLTR1b LTR/Gypsy 4 88 (694) 1431125 447 28.7 7.2 5.1 chr5 130110160 130110394 (50804866) + LTR81AB LTR/Gypsy 10 249 (29) 1431209 247 27.6 8.1 0.0 chr5 130176557 130176643 (50738617) C MamGypLTR2c LTR/Gypsy (575) 493 400 1431279 229 26.2 16.7 1.5 chr5 130180463 130180528 (50734732) + MamGypLTR2b LTR/Gypsy 662 737 (185) 1431283 564 31.1 6.7 2.8 chr5 130485545 130485799 (50429461) + MamGypLTR1c LTR/Gypsy 539 803 (0) 1431630 454 21.9 9.3 2.1 chr5 131248147 131248286 (49666974) + LTR81A LTR/Gypsy 104 253 (1097) 1432876 508 25.7 9.7 14.5 chr5 131251019 131251193 (49664067) + LTR81C LTR/Gypsy 741 878 (275) 1432882 508 25.7 9.7 14.5 chr5 131251316 131251540 (49663720) + LTR81C LTR/Gypsy 879 1122 (31) 1432882 250 17.1 0.0 0.0 chr5 131252480 131252520 (49662740) + MamGypLTR1a LTR/Gypsy 744 784 (0) 1432886 252 30.3 0.0 0.0 chr5 131400266 131400331 (49514929) C MamGypLTR1d LTR/Gypsy (673) 140 75 1433056 329 34.1 4.2 2.4 chr5 131505004 131505275 (49409985) + MamGypLTR1a LTR/Gypsy 463 746 (38) 1433152 274 25.4 0.0 0.0 chr5 131576354 131576412 (49338848) C MamGypLTR3 LTR/Gypsy (0) 839 781 1433251 563 33.0 10.3 1.5 chr5 131586354 131586624 (49328636) C MamGypLTR3 LTR/Gypsy (352) 487 193 1433266 415 21.6 6.2 1.8 chr5 132586723 132586835 (48328425) + LTR81AB LTR/Gypsy 2 119 (159) 1434861 282 30.9 6.2 2.3 chr5 132586891 132587019 (48328241) + LTR81AB LTR/Gypsy 224 357 (1036) 1434861 355 29.2 18.8 1.3 chr5 132587726 132587954 (48327306) + LTR81AB LTR/Gypsy 1092 1360 (33) 1434861 235 33.1 6.6 6.1 chr5 132683921 132684116 (48231144) + MamGypLTR2c LTR/Gypsy 2 198 (870) 1434961 675 28.1 1.3 3.5 chr5 133096274 133096502 (47818758) C MamGypLTR1d LTR/Gypsy (586) 227 4 1435426 382 30.6 3.9 3.1 chr5 133266967 133267094 (47648166) C MamGypLTR1b LTR/Gypsy (90) 692 564 1435657 315 32.1 13.9 6.4 chr5 133516216 133516983 (47398277) + MamGypLTR2b LTR/Gypsy 84 909 (13) 1436089 306 28.5 13.0 1.4 chr5 133705541 133705686 (47209574) + LTR81A LTR/Gypsy 14 176 (1174) 1436452 396 33.2 6.9 4.5 chr5 134991874 134992119 (45923141) C MamGypLTR1b LTR/Gypsy (120) 662 411 1438531 289 23.4 7.5 3.8 chr5 135145906 135146038 (45769222) + MamGypLTR2b LTR/Gypsy 773 910 (12) 1438691 313 25.8 27.1 3.1 chr5 135224272 135224559 (45690701) C MamGypLTR2c LTR/Gypsy (21) 1047 691 1438801 235 29.1 5.8 8.4 chr5 135536991 135537144 (45378116) + MamGypLTR1d LTR/Gypsy 44 193 (620) 1439232 258 12.8 0.0 0.0 chr5 135538008 135538046 (45377214) + MamGypLTR1b LTR/Gypsy 735 773 (9) 1439234 380 21.9 8.4 7.9 chr5 135741157 135741334 (45173926) + LTR81A LTR/Gypsy 36 214 (1136) 1439498 225 34.1 3.4 8.2 chr5 136399368 136399514 (44515746) + MamGypLTR2b LTR/Gypsy 112 251 (671) 1440295 727 30.5 17.5 2.6 chr5 136475526 136476115 (44439145) + MamGypLTR1b LTR/Gypsy 98 775 (7) 1440401 410 23.6 22.9 0.0 chr5 136904980 136905119 (44010141) + MamGypLTR1c LTR/Gypsy 628 799 (4) 1440960 283 30.1 8.1 0.8 chr5 136943856 136943979 (43971281) + LTR81B LTR/Gypsy 1233 1365 (28) 1441026 310 26.2 12.2 4.5 chr5 137098044 137098199 (43817061) C MamGypLTR1b LTR/Gypsy (7) 775 608 1441283 240 38.4 7.9 0.0 chr5 137181762 137181925 (43733335) + MamGypLTR1c LTR/Gypsy 511 687 (116) 1441422 518 26.3 9.6 1.1 chr5 137924497 137924673 (42990587) C MamGypLTR1c LTR/Gypsy (0) 803 612 1442924 494 28.0 9.6 3.9 chr5 137924777 137924984 (42990276) C MamGypLTR1c LTR/Gypsy (358) 445 226 1442924 241 31.2 4.0 4.0 chr5 138005470 138005569 (42909691) + MamGypLTR3 LTR/Gypsy 361 460 (379) 1443094 288 30.9 1.2 0.0 chr5 138047540 138047623 (42867637) + MamGypLTR1a LTR/Gypsy 41 125 (659) 1443185 299 24.1 1.2 3.5 chr5 138050601 138050686 (42864574) + MamGypLTR1a LTR/Gypsy 177 260 (524) 1443199 266 23.5 12.9 3.0 chr5 141574048 141574148 (39341112) C LTR81 LTR/Gypsy (0) 1189 1079 1448872 270 27.9 15.2 6.1 chr5 141854626 141854823 (39060437) C MamGypLTR1c LTR/Gypsy (288) 525 310 1449508 239 25.4 13.7 6.9 chr5 141854984 141855114 (39060146) C MamGypLTR1c LTR/Gypsy (663) 140 1 1449508 284 30.0 12.6 2.9 chr5 142040283 142040457 (38874803) C LTR81AB LTR/Gypsy (1009) 384 193 1449846 365 17.1 1.5 16.5 chr5 142040481 142040613 (38874647) C LTR81AB LTR/Gypsy (157) 121 9 1449846 394 30.1 12.6 5.7 chr5 142116418 142117054 (38798206) C MamGypLTR1b LTR/Gypsy (1) 781 101 1449971 378 26.9 2.0 4.0 chr5 143027600 143027750 (37887510) C MamGypLTR1a LTR/Gypsy (6) 778 631 1451349 343 32.0 5.3 5.3 chr5 143027781 143027968 (37887292) C MamGypLTR1a LTR/Gypsy (225) 559 372 1451349 476 28.6 3.4 5.0 chr5 143028031 143028269 (37886991) C MamGypLTR1a LTR/Gypsy (520) 264 30 1451349 530 26.4 8.4 0.6 chr5 143159737 143159915 (37755345) + MamGypLTR1c LTR/Gypsy 594 786 (17) 1451549 343 29.9 2.4 4.3 chr5 143373534 143373697 (37541563) C LTR81B LTR/Gypsy (33) 1360 1200 1451889 418 32.2 10.7 4.5 chr5 143397699 143397987 (37517273) C MamGypLTR1a LTR/Gypsy (70) 714 408 1451926 566 24.1 7.7 0.5 chr5 143398098 143398293 (37516967) C MamGypLTR1a LTR/Gypsy (574) 210 1 1451926 293 31.9 4.3 0.0 chr5 143415682 143415797 (37499463) + MamGypLTR1b LTR/Gypsy 480 600 (182) 1451956 380 28.7 9.1 11.4 chr5 143503576 143504105 (37411155) C MamGypLTR1c LTR/Gypsy (0) 803 131 1452082 966 34.4 8.0 5.0 chr5 143922664 143922828 (36992432) + MamGypLTR3 LTR/Gypsy 41 212 (627) 1452711 966 34.4 8.0 5.0 chr5 143923131 143923725 (36991535) + MamGypLTR3 LTR/Gypsy 213 824 (15) 1452711 285 34.6 2.5 4.4 chr5 144175873 144176032 (36739228) C MamGypLTR1c LTR/Gypsy (591) 212 56 1453029 396 33.0 4.3 6.2 chr5 144481817 144482120 (36433140) + MamGypLTR3 LTR/Gypsy 76 373 (466) 1453446 404 37.2 3.0 1.0 chr5 144482125 144482325 (36432935) + MamGypLTR3 LTR/Gypsy 613 817 (22) 1453446 441 33.8 11.0 4.7 chr5 144569924 144570324 (36344936) + MamGypLTR1a LTR/Gypsy 359 784 (0) 1453587 389 32.5 5.1 2.5 chr5 145058448 145058722 (35856538) C MamGypLTR1b LTR/Gypsy (0) 782 501 1454314 352 29.5 5.4 0.0 chr5 145571262 145571373 (35343887) C MamGypLTR3 LTR/Gypsy (4) 835 718 1455280 278 34.2 3.7 3.1 chr5 145777255 145777417 (35137843) + LTR81C LTR/Gypsy 1 164 (989) 1455696 403 25.3 25.5 3.9 chr5 145778950 145779260 (35136000) + LTR81C LTR/Gypsy 816 1343 (7) 1455699 323 32.2 10.4 6.1 chr5 146283870 146284166 (34631094) + MamGypLTR2c LTR/Gypsy 110 419 (649) 1456567 382 26.4 10.3 1.4 chr5 146567395 146567540 (34347720) + MamGypLTR1a LTR/Gypsy 2 160 (624) 1457038 521 26.4 11.4 4.2 chr5 146567922 146568210 (34347050) + MamGypLTR1a LTR/Gypsy 468 777 (7) 1457038 263 24.0 11.6 8.3 chr5 147335810 147335968 (33579292) C MamGypLTR1c LTR/Gypsy (1185) 165 1 1458263 469 26.3 27.0 1.5 chr5 147945969 147946231 (32969029) + MamGypLTR1b LTR/Gypsy 436 765 (17) 1459220 474 28.3 3.8 3.2 chr5 148073881 148074037 (32841223) + MamGypLTR1b LTR/Gypsy 625 782 (0) 1459414 228 15.6 4.3 7.2 chr5 148155835 148155853 (32759407) C MamGypLTR1b LTR/Gypsy (3) 779 765 1459531 228 15.6 4.3 7.2 chr5 148156761 148156809 (32758451) C MamGypLTR1b LTR/Gypsy (18) 764 713 1459531 284 32.6 6.8 6.3 chr5 148554875 148555064 (32360196) + MamGypLTR1d LTR/Gypsy 131 321 (492) 1460253 256 30.2 9.6 4.8 chr5 149036210 149036355 (31878905) C MamGypLTR3 LTR/Gypsy (131) 708 556 1461288 680 33.5 9.2 1.3 chr5 149333384 149333861 (31581399) C MamGypLTR1b LTR/Gypsy (67) 715 200 1461960 305 31.1 2.1 3.6 chr5 149926424 149926563 (30988697) C MamGypLTR1c LTR/Gypsy (612) 191 54 1463193 668 25.1 4.4 0.5 chr5 151467897 151468100 (29447160) C MamGypLTR2b LTR/Gypsy (23) 899 688 1466044 320 30.9 2.4 12.0 chr5 152384716 152384997 (28530263) + LTR81C LTR/Gypsy 926 1186 (3) 1467450 253 25.4 2.2 10.3 chr5 153333981 153334116 (27581144) + MamGypLTR1b LTR/Gypsy 79 203 (579) 1468997 500 30.0 17.2 1.5 chr5 153334663 153334987 (27580273) + MamGypLTR1b LTR/Gypsy 360 735 (47) 1468997 226 22.1 23.9 4.2 chr5 153337465 153337606 (27577654) + MamGypLTR1b LTR/Gypsy 98 267 (546) 1469003 360 27.6 5.7 3.2 chr5 153337680 153337836 (27577424) + MamGypLTR1b LTR/Gypsy 368 528 (254) 1469003 845 26.1 4.9 8.3 chr5 154571425 154571893 (26343367) + LTR81B LTR/Gypsy 1 453 (940) 1471572 480 30.7 8.0 2.0 chr5 154572631 154572932 (26342328) + LTR81B LTR/Gypsy 862 1181 (8) 1471572 441 19.1 4.7 1.9 chr5 154601035 154601141 (26314119) C LTR81A LTR/Gypsy (1062) 288 179 1471619 304 30.3 2.0 0.0 chr5 154762268 154762366 (26152894) C MamGypLTR1c LTR/Gypsy (0) 803 703 1471863 265 31.5 12.8 0.5 chr5 154959993 154960196 (25955064) + MamGypLTR1d LTR/Gypsy 566 794 (19) 1472185 244 37.5 3.9 2.8 chr5 155263468 155263648 (25651612) C MamGypLTR2b LTR/Gypsy (603) 319 137 1472595 251 38.7 8.2 3.6 chr5 155286811 155287089 (25628171) + LTR81B LTR/Gypsy 848 1139 (254) 1472643 421 26.7 5.0 3.3 chr5 155438748 155438929 (25476331) C LTR81B LTR/Gypsy (1205) 188 4 1472894 251 19.2 11.4 1.3 chr5 155588854 155588932 (25326328) C MamGypLTR2b LTR/Gypsy (14) 908 822 1473097 225 26.3 14.0 1.0 chr5 155588945 155589044 (25326216) C MamGypLTR2b LTR/Gypsy (138) 784 672 1473097 232 23.1 3.9 0.0 chr5 155647785 155647862 (25267398) C MamGypLTR1d LTR/Gypsy (0) 813 733 1473187 412 30.2 22.1 5.4 chr5 155927915 155928429 (24986831) C MamGypLTR1a LTR/Gypsy (157) 627 27 1473628 471 31.7 12.6 1.0 chr5 156060707 156061015 (24854245) C MamGypLTR1b LTR/Gypsy (77) 705 361 1473835 378 18.6 9.3 0.0 chr5 156061799 156061884 (24853376) C MamGypLTR1a LTR/Gypsy (680) 104 11 1473839 281 29.7 1.4 2.8 chr5 156095640 156095804 (24819456) + LTR81B LTR/Gypsy 85 248 (941) 1473873 284 32.8 8.3 3.9 chr5 156096269 156096449 (24818811) + LTR81B LTR/Gypsy 983 1171 (222) 1473873 362 27.8 3.7 1.5 chr5 156320666 156320800 (24594460) + MamGypLTR1b LTR/Gypsy 1 138 (644) 1474226 268 32.2 11.4 4.2 chr5 156321023 156321356 (24593904) + MamGypLTR1b LTR/Gypsy 384 767 (36) 1474226 268 25.7 4.0 2.6 chr5 156955396 156955471 (23959789) + LTR81C LTR/Gypsy 216 292 (861) 1475478 320 14.3 0.0 0.0 chr5 157440753 157440801 (23474459) C MamGypLTR3 LTR/Gypsy (8) 831 783 1476431 605 30.0 10.6 6.9 chr5 157440910 157441457 (23473803) C MamGypLTR3 LTR/Gypsy (55) 784 217 1476431 346 33.0 18.8 4.6 chr5 157496413 157496848 (23418412) C MamGypLTR1a LTR/Gypsy (19) 765 268 1476538 282 23.9 17.2 4.9 chr5 157497279 157497441 (23417819) C MamGypLTR1a LTR/Gypsy (594) 188 6 1476538 904 22.8 7.0 2.7 chr5 157507623 157507879 (23407381) C MamGypLTR1a LTR/Gypsy (513) 271 4 1476555 518 31.3 7.9 1.1 chr5 157596889 157597153 (23318107) C MamGypLTR3 LTR/Gypsy (23) 816 534 1476720 252 20.3 7.8 12.2 chr5 158149280 158149369 (22765891) C MamGypLTR1c LTR/Gypsy (583) 220 135 1477582 315 36.0 8.6 1.7 chr5 158653407 158653581 (22261679) + MamGypLTR2c LTR/Gypsy 184 370 (698) 1478245 278 22.7 4.0 1.3 chr5 158655736 158655811 (22259449) + MamGypLTR1d LTR/Gypsy 731 808 (5) 1478251 263 22.1 14.3 0.0 chr5 158665863 158665939 (22249321) + MamGypLTR1d LTR/Gypsy 714 811 (2) 1478262 360 30.9 12.6 1.1 chr5 158723817 158724006 (22191254) C MamGypLTR1c LTR/Gypsy (5) 798 587 1478358 404 33.6 4.9 1.4 chr5 158726915 158727056 (22188204) C MamGypLTR1c LTR/Gypsy (339) 464 318 1478358 231 25.6 1.1 5.8 chr5 158886652 158886738 (22028522) + MamGypLTR2c LTR/Gypsy 826 908 (160) 1478641 444 29.3 12.4 3.1 chr5 158947450 158947706 (21967554) + MamGypLTR1b LTR/Gypsy 499 779 (3) 1478742 413 23.2 2.6 9.0 chr5 159148361 159148516 (21766744) + MamGypLTR1a LTR/Gypsy 50 195 (589) 1479065 278 34.6 7.4 0.5 chr5 159148810 159149012 (21766248) + MamGypLTR1d LTR/Gypsy 597 813 (0) 1479066 284 23.3 2.7 0.0 chr5 159272871 159272943 (21642317) C MamGypLTR1a LTR/Gypsy (4) 799 725 1479292 337 22.5 32.0 2.8 chr5 159273369 159273615 (21641645) C MamGypLTR1a LTR/Gypsy (455) 329 11 1479292 251 28.9 5.1 3.4 chr5 159317187 159317304 (21597956) C MamGypLTR3 LTR/Gypsy (453) 386 267 1479376 632 23.3 17.2 2.2 chr5 159409638 159409905 (21505355) C MamGypLTR1d LTR/Gypsy (504) 309 2 1479571 328 30.3 4.5 0.6 chr5 160713306 160713484 (20201776) C MamGypLTR1a LTR/Gypsy (357) 427 242 1481861 439 33.3 17.3 3.3 chr5 160996749 160997175 (19918085) + MamGypLTR1b LTR/Gypsy 1 487 (297) 1482282 1199 30.2 12.0 2.7 chr5 161096093 161096650 (19818610) C MamGypLTR1c LTR/Gypsy (182) 621 12 1482406 439 33.1 9.7 4.7 chr5 161710353 161710755 (19204505) + LTR81B LTR/Gypsy 1 423 (970) 1483323 289 21.8 5.8 9.1 chr5 161712553 161712673 (19202587) + LTR81 LTR/Gypsy 1051 1167 (22) 1483327 259 38.6 2.5 1.2 chr5 162839941 162840100 (18075160) C MamGypLTR1b LTR/Gypsy (177) 605 444 1484873 340 20.9 10.3 6.9 chr5 162863407 162863581 (18051679) + MamGypLTR1c LTR/Gypsy 1 181 (622) 1484908 388 29.3 3.7 4.3 chr5 162863716 162863879 (18051381) + MamGypLTR1d LTR/Gypsy 651 813 (0) 1484909 424 36.0 10.6 3.0 chr5 163113448 163113748 (17801512) C LTR81C LTR/Gypsy (691) 462 139 1485308 258 29.9 5.0 2.1 chr5 163185188 163185327 (17729933) C MamGypLTR2c LTR/Gypsy (62) 1006 863 1485418 269 31.0 12.7 1.0 chr5 163210601 163210805 (17704455) C MamGypLTR1a LTR/Gypsy (550) 234 6 1485446 351 19.4 11.3 2.9 chr5 163319331 163319438 (17595822) C MamGypLTR2b LTR/Gypsy (23) 899 798 1485569 295 32.2 5.6 3.2 chr5 163642525 163642649 (17272611) + MamGypLTR3 LTR/Gypsy 653 780 (59) 1486019 266 32.4 11.0 0.0 chr5 164071390 164071525 (16843735) C MamGypLTR2c LTR/Gypsy (26) 1042 892 1486602 228 32.7 2.8 4.7 chr5 164071821 164071926 (16843334) C MamGypLTR2c LTR/Gypsy (670) 398 295 1486602 272 32.6 3.7 8.4 chr5 164458047 164458237 (16457023) C MamGypLTR2b LTR/Gypsy (473) 449 268 1487131 390 24.2 2.2 5.9 chr5 165602159 165602294 (15312966) C MamGypLTR2b LTR/Gypsy (14) 908 778 1488700 261 26.9 8.8 6.7 chr5 167961887 167962125 (12953135) + LTR81C LTR/Gypsy 673 954 (199) 1492513 308 26.3 3.9 2.5 chr5 168080352 168080525 (12834735) + MamGypLTR2b LTR/Gypsy 612 892 (30) 1492741 261 29.0 11.5 4.6 chr5 168424724 168424853 (12490407) + MamGypLTR1b LTR/Gypsy 620 758 (24) 1493297 655 24.5 5.7 5.7 chr5 168436856 168437084 (12478176) + MamGypLTR1d LTR/Gypsy 3 231 (582) 1493320 286 35.8 7.2 1.4 chr5 168437150 168437288 (12477972) + MamGypLTR1d LTR/Gypsy 400 546 (267) 1493320 268 32.4 8.7 3.7 chr5 168449343 168449560 (12465700) + MamGypLTR1d LTR/Gypsy 583 811 (2) 1493340 270 26.6 9.0 4.5 chr5 168484855 168484988 (12430272) + LTR81C LTR/Gypsy 952 1091 (62) 1493388 329 21.7 10.7 6.6 chr5 168988231 168988427 (11926833) + MamGypLTR2b LTR/Gypsy 693 897 (25) 1494172 292 28.7 15.2 2.2 chr5 169196040 169196217 (11719043) C LTR81C LTR/Gypsy (0) 1153 953 1494508 787 27.4 2.3 7.3 chr5 169390228 169390570 (11524690) C MamGypLTR1b LTR/Gypsy (4) 778 453 1494846 472 31.0 6.9 2.1 chr5 169746184 169746371 (11168889) + MamGypLTR3 LTR/Gypsy 209 405 (434) 1495506 373 28.0 1.7 0.8 chr5 169846483 169846601 (11068659) + MamGypLTR2b LTR/Gypsy 773 892 (30) 1495679 397 20.7 0.0 2.4 chr5 169868055 169868138 (11047122) C MamGypLTR1d LTR/Gypsy (1) 812 731 1495726 390 27.4 8.4 2.4 chr5 169921993 169922206 (10993054) C MamGypLTR1d LTR/Gypsy (3) 810 560 1495812 416 26.4 6.8 2.5 chr5 169959187 169959349 (10955911) C MamGypLTR1d LTR/Gypsy (13) 800 631 1495887 430 25.6 3.6 3.6 chr5 170089094 170089259 (10826001) C MamGypLTR2b LTR/Gypsy (4) 918 753 1496131 310 28.3 15.0 9.3 chr5 170762386 170762837 (10152423) + MamGypLTR1d LTR/Gypsy 17 494 (319) 1497119 273 29.5 3.9 0.0 chr5 170975706 170975783 (9939477) C MamGypLTR3 LTR/Gypsy (99) 740 660 1497594 420 26.9 5.9 1.5 chr5 171104355 171104490 (9810770) C MamGypLTR3 LTR/Gypsy (304) 535 394 1497851 243 14.3 0.0 0.0 chr5 171107826 171107867 (9807393) C MamGypLTR2c LTR/Gypsy (130) 938 897 1497860 474 26.8 18.6 2.5 chr5 171133929 171134159 (9781101) + MamGypLTR1a LTR/Gypsy 491 758 (26) 1497914 453 23.0 8.7 0.0 chr5 171215038 171215163 (9700097) C MamGypLTR1b LTR/Gypsy (1) 781 645 1498075 309 19.8 12.0 4.0 chr5 171273783 171273976 (9641284) + MamGypLTR2c LTR/Gypsy 706 1065 (3) 1498184 367 25.3 30.7 0.0 chr5 172127931 172128096 (8787164) + MamGypLTR1c LTR/Gypsy 587 803 (0) 1499967 289 30.6 13.9 4.4 chr5 172849099 172849371 (8065889) C LTR81A LTR/Gypsy (903) 447 149 1501457 360 28.9 12.7 5.4 chr5 172945724 172945928 (7969332) C MamGypLTR1d LTR/Gypsy (15) 798 579 1501636 350 37.5 4.2 4.2 chr5 172946063 172946399 (7968861) C MamGypLTR2b LTR/Gypsy (522) 400 64 1501637 316 28.0 17.0 7.4 chr5 173019025 173019314 (7895946) C MamGypLTR3 LTR/Gypsy (3) 836 519 1501769 421 28.3 8.5 0.7 chr5 173187794 173187946 (7727314) C MamGypLTR1c LTR/Gypsy (0) 803 639 1502105 485 27.8 0.0 1.6 chr5 173224513 173224640 (7690620) C MamGypLTR1b LTR/Gypsy (6) 776 651 1502187 274 19.7 19.9 2.8 chr5 173225220 173225360 (7689900) C MamGypLTR1b LTR/Gypsy (487) 297 133 1502187 655 32.7 16.4 4.4 chr5 173244659 173245334 (7669926) + LTR81C LTR/Gypsy 60 816 (337) 1502227 341 32.8 15.6 2.1 chr5 173563442 173563678 (7351582) C MamGypLTR1c LTR/Gypsy (9) 794 526 1502779 292 33.7 7.1 1.5 chr5 173629823 173630018 (7285242) C MamGypLTR1d LTR/Gypsy (8) 805 599 1502917 345 29.7 8.4 7.3 chr5 173630692 173630869 (7284391) C MamGypLTR2b LTR/Gypsy (693) 229 50 1502919 237 33.0 15.6 3.5 chr5 173709244 173709526 (7205734) C MamGypLTR2b LTR/Gypsy (20) 902 586 1503057 293 29.4 2.8 10.6 chr5 173841239 173841379 (7073881) C LTR81B LTR/Gypsy (50) 1343 1214 1503302 361 25.0 10.3 2.9 chr5 174248736 174248871 (6666389) + MamGypLTR2b LTR/Gypsy 768 913 (9) 1504101 298 32.1 5.3 8.5 chr5 174453622 174453983 (6461277) + MamGypLTR2b LTR/Gypsy 23 521 (547) 1504442 252 28.4 12.5 8.9 chr5 174454216 174454439 (6460821) + MamGypLTR1c LTR/Gypsy 568 799 (4) 1504443 771 30.1 6.0 5.7 chr5 174562534 174562953 (6352307) + MamGypLTR1d LTR/Gypsy 1 421 (392) 1504645 520 30.8 7.4 4.6 chr5 174562977 174563299 (6351961) + MamGypLTR1d LTR/Gypsy 481 812 (1) 1504645 635 26.8 11.3 3.9 chr5 174658401 174658683 (6256577) C MamGypLTR2c LTR/Gypsy (0) 1068 765 1504813 266 20.4 2.0 0.0 chr5 174683912 174683960 (6231300) + MamGypLTR1c LTR/Gypsy 662 711 (92) 1504866 527 33.7 6.7 2.4 chr5 174754781 174755195 (6160065) C MamGypLTR1d LTR/Gypsy (1) 812 374 1504977 273 33.5 11.5 9.8 chr5 174895050 174895502 (6019758) C MamGypLTR1c LTR/Gypsy (79) 724 264 1505203 296 32.5 1.2 7.0 chr5 175121201 175121372 (5793888) C MamGypLTR2c LTR/Gypsy (86) 982 821 1505669 439 29.0 4.1 1.4 chr5 175179986 175180132 (5735128) + MamGypLTR1a LTR/Gypsy 1 151 (631) 1505778 507 35.4 4.4 3.4 chr5 175180215 175180512 (5734748) + MamGypLTR1a LTR/Gypsy 438 738 (46) 1505778 396 22.1 3.0 2.3 chr5 175639552 175639663 (5275597) + MamGypLTR1d LTR/Gypsy 708 915 (7) 1506525 252 33.0 1.0 1.0 chr5 176104792 176104895 (4810365) + MamGypLTR2b LTR/Gypsy 501 604 (318) 1507442 262 27.6 0.0 5.4 chr5 176106239 176106330 (4808930) C MamGypLTR2b LTR/Gypsy (12) 910 824 1507444 244 22.7 2.1 7.4 chr5 176312392 176312430 (4602830) + MamGypLTR1d LTR/Gypsy 686 724 (89) 1507770 244 22.7 2.1 7.4 chr5 176312721 176312775 (4602485) + MamGypLTR1d LTR/Gypsy 725 775 (38) 1507770 483 29.3 4.5 2.2 chr5 176989207 176989384 (3925876) C MamGypLTR1d LTR/Gypsy (613) 200 19 1509189 545 30.1 13.4 5.8 chr5 176990226 176990606 (3924654) C MamGypLTR1c LTR/Gypsy (10) 793 384 1509190 386 29.3 0.0 4.1 chr5 176992231 176992376 (3922884) C MamGypLTR1c LTR/Gypsy (658) 145 6 1509190 388 24.1 3.0 2.3 chr5 177125282 177125393 (3789867) C MamGypLTR1d LTR/Gypsy (7) 915 708 1509426 927 26.8 25.6 2.4 chr5 177497542 177498210 (3417050) C LTR81A LTR/Gypsy (284) 1109 286 1509998 271 31.1 2.4 4.0 chr5 177735294 177735417 (3179843) + MamGypLTR1b LTR/Gypsy 654 775 (7) 1510455 516 27.2 6.2 0.5 chr5 178590720 178590911 (2324349) + MamGypLTR1b LTR/Gypsy 1 203 (579) 1511856 293 32.5 2.6 0.0 chr5 178610141 178610254 (2305006) + LTR81AB LTR/Gypsy 128 244 (34) 1511880 235 20.9 5.5 5.5 chr5 178923553 178923643 (1991617) C MamGypLTR2c LTR/Gypsy (939) 129 39 1512314 255 34.0 6.5 1.5 chr5 179102293 179102503 (1812757) C MamGypLTR1c LTR/Gypsy (594) 219 5 1512697 313 26.4 0.9 4.5 chr5 180095671 180095781 (819479) + MamGypLTR2c LTR/Gypsy 39 145 (923) 1514371 320 28.2 4.8 7.0 chr5 180239591 180239819 (675441) C MamGypLTR2b LTR/Gypsy (2) 920 697 1514582 280 16.4 1.8 1.8 chr5 180465377 180465432 (449828) C LTR81A LTR/Gypsy (1203) 147 92 1514856 231 28.8 2.6 3.5 chr6 236542 236656 (170878411) C MamGypLTR2b LTR/Gypsy (1) 921 808 1515835 258 28.6 0.0 3.0 chr6 417663 417763 (170697304) + MamGypLTR1d LTR/Gypsy 493 590 (223) 1516042 310 27.4 7.3 0.7 chr6 855667 855802 (170259265) C MamGypLTR1b LTR/Gypsy (277) 505 361 1516570 545 25.4 5.0 0.7 chr6 1488622 1488760 (169626307) + MamGypLTR1b LTR/Gypsy 638 782 (0) 1517438 322 28.3 5.2 7.1 chr6 1936641 1936853 (169178214) + LTR81B LTR/Gypsy 884 1111 (282) 1517965 232 36.1 2.1 0.0 chr6 2362133 2362229 (168752838) + MamGypLTR3 LTR/Gypsy 668 766 (73) 1518536 735 31.4 18.1 1.9 chr6 2482913 2483438 (168631629) + MamGypLTR3 LTR/Gypsy 226 836 (3) 1518699 359 31.2 5.6 4.5 chr6 2619145 2619444 (168495623) C MamGypLTR1c LTR/Gypsy (492) 321 16 1518889 285 23.9 9.5 2.6 chr6 2729226 2729341 (168385726) C MamGypLTR3 LTR/Gypsy (322) 517 394 1519031 640 24.6 7.5 5.6 chr6 2998414 2998680 (168116387) C MamGypLTR3 LTR/Gypsy (8) 831 560 1519426 476 25.5 6.2 12.8 chr6 3056429 3056534 (168058533) + MamGypLTR3 LTR/Gypsy 560 654 (185) 1519510 476 25.5 6.2 12.8 chr6 3056878 3057058 (168058009) + MamGypLTR3 LTR/Gypsy 655 828 (11) 1519510 278 27.2 7.9 4.0 chr6 3200205 3200364 (167914703) C MamGypLTR2b LTR/Gypsy (25) 897 680 1519729 227 30.9 4.5 1.8 chr6 3504003 3504114 (167610953) + MamGypLTR2b LTR/Gypsy 2 116 (952) 1520172 463 26.8 19.6 4.8 chr6 3505731 3506067 (167609000) + MamGypLTR2b LTR/Gypsy 533 919 (3) 1520172 390 23.4 8.7 15.0 chr6 3540306 3540571 (167574496) C LTR81B LTR/Gypsy (17) 1376 1128 1520229 266 29.8 2.9 0.0 chr6 3605246 3605349 (167509718) + MamGypLTR1b LTR/Gypsy 1 107 (675) 1520324 263 32.7 5.5 6.4 chr6 4353524 4353758 (166761309) + MamGypLTR1c LTR/Gypsy 571 803 (0) 1521465 334 24.1 1.1 3.3 chr6 4378030 4378119 (166736948) + MamGypLTR1c LTR/Gypsy 98 185 (618) 1521504 277 31.3 10.5 5.3 chr6 4434217 4434425 (166680642) C MamGypLTR2b LTR/Gypsy (698) 224 5 1521576 1157 30.5 12.4 6.3 chr6 4448081 4448837 (166666230) C MamGypLTR1c LTR/Gypsy (0) 803 1 1521604 257 25.0 9.2 0.0 chr6 4489839 4489914 (166625153) + LTR81 LTR/Gypsy 22 104 (1085) 1521676 228 36.5 0.0 0.0 chr6 5058434 5058518 (166056549) C MamGypLTR3 LTR/Gypsy (210) 629 545 1522543 225 35.0 3.7 1.2 chr6 5081461 5081541 (166033526) + MamGypLTR2b LTR/Gypsy 174 256 (666) 1522597 236 30.0 7.8 6.0 chr6 5703927 5704210 (165410857) C MamGypLTR1b LTR/Gypsy (274) 508 220 1523496 305 31.4 16.4 2.7 chr6 5803428 5803646 (165311421) C MamGypLTR1c LTR/Gypsy (19) 784 536 1523652 231 13.1 0.0 2.1 chr6 6236710 6236756 (164878311) + MamGypLTR1b LTR/Gypsy 698 743 (39) 1524177 578 24.4 1.3 7.3 chr6 6265714 6265947 (164849120) + MamGypLTR2b LTR/Gypsy 701 920 (2) 1524211 251 30.5 12.9 9.6 chr6 6450971 6451242 (164663825) + MamGypLTR3 LTR/Gypsy 559 839 (0) 1524448 495 26.2 18.6 5.0 chr6 6667449 6667749 (164447318) C LTR81B LTR/Gypsy (0) 1393 1052 1524740 455 31.9 5.0 9.7 chr6 6718656 6718705 (164396362) C MamGypLTR1b LTR/Gypsy (0) 782 734 1524817 455 31.9 5.0 9.7 chr6 6719000 6719247 (164395820) C MamGypLTR1b LTR/Gypsy (49) 733 498 1524817 367 25.2 10.2 4.3 chr6 6719458 6719688 (164395379) C MamGypLTR1b LTR/Gypsy (536) 248 7 1524817 350 29.5 4.9 5.8 chr6 7618688 7618892 (163496175) + MamGypLTR3 LTR/Gypsy 632 834 (5) 1526422 402 32.0 13.3 4.3 chr6 7793194 7793372 (163321695) C MamGypLTR2b LTR/Gypsy (0) 922 727 1526680 402 32.0 13.3 4.3 chr6 7793946 7794157 (163320910) C MamGypLTR2b LTR/Gypsy (196) 726 496 1526680 360 26.8 4.1 9.2 chr6 8245124 8245341 (162869726) + LTR81 LTR/Gypsy 140 346 (843) 1527344 238 29.8 3.1 2.1 chr6 8324035 8324130 (162790937) C LTR81C LTR/Gypsy (0) 1153 1057 1527452 262 30.2 1.1 5.1 chr6 8328043 8328237 (162786830) C LTR81B LTR/Gypsy (1040) 310 121 1527459 284 32.5 14.9 1.3 chr6 9318537 9318784 (161796283) C LTR81C LTR/Gypsy (338) 1012 532 1528815 267 35.0 12.3 3.6 chr6 9318859 9319166 (161795901) C LTR81A LTR/Gypsy (731) 619 285 1528816 285 38.5 2.0 0.7 chr6 9602941 9603089 (161511978) + MamGypLTR3 LTR/Gypsy 630 780 (59) 1529209 357 30.0 13.1 2.5 chr6 10005903 10006138 (161108929) + LTR81A LTR/Gypsy 1070 1330 (20) 1529707 450 30.5 9.1 5.3 chr6 11146328 11146590 (159968477) + MamGypLTR1b LTR/Gypsy 508 780 (2) 1531610 269 24.7 2.1 3.1 chr6 13376284 13376379 (157738688) + LTR81B LTR/Gypsy 491 585 (765) 1534847 735 32.1 9.7 5.2 chr6 13376436 13376991 (157738076) + LTR81B LTR/Gypsy 791 1371 (22) 1534847 506 25.6 4.8 1.2 chr6 13546351 13546516 (157568551) C LTR81B LTR/Gypsy (1141) 252 81 1535168 231 7.0 13.6 2.3 chr6 14089642 14089685 (157025382) C MamGypLTR2b LTR/Gypsy (39) 883 835 1536153 259 29.4 8.3 6.4 chr6 14253202 14253357 (156861710) C MamGypLTR1c LTR/Gypsy (0) 803 645 1536390 350 26.9 12.1 3.9 chr6 14321610 14321791 (156793276) + MamGypLTR1c LTR/Gypsy 5 201 (602) 1536477 291 26.4 7.4 1.2 chr6 14323390 14323524 (156791543) + MamGypLTR1c LTR/Gypsy 713 800 (13) 1536477 864 32.2 7.0 8.5 chr6 14416268 14416976 (156698091) C MamGypLTR1c LTR/Gypsy (100) 703 5 1536647 817 28.2 7.0 6.6 chr6 14468592 14468854 (156646213) + LTR81B LTR/Gypsy 1 267 (1126) 1536728 817 28.2 7.0 6.6 chr6 14469748 14469953 (156645114) + LTR81B LTR/Gypsy 268 472 (921) 1536728 386 26.9 14.7 7.7 chr6 14471248 14471533 (156643534) + LTR81B LTR/Gypsy 834 1139 (14) 1536728 235 34.5 3.6 1.8 chr6 14512205 14512316 (156602751) + LTR81A LTR/Gypsy 264 377 (1016) 1536783 231 29.2 2.7 1.4 chr6 14512593 14512665 (156602402) + LTR81A LTR/Gypsy 499 572 (617) 1536783 328 30.4 4.3 9.7 chr6 14512924 14513120 (156601947) + LTR81A LTR/Gypsy 939 1129 (221) 1536783 328 30.4 4.3 9.7 chr6 14513622 14513722 (156601345) + LTR81A LTR/Gypsy 1130 1221 (129) 1536783 874 27.5 19.6 3.3 chr6 14628912 14629543 (156485524) C MamGypLTR1a LTR/Gypsy (49) 735 1 1536961 453 23.4 4.0 12.8 chr6 14664948 14665173 (156449894) C MamGypLTR1c LTR/Gypsy (592) 211 6 1537014 245 25.0 1.4 4.2 chr6 14857321 14857391 (156257676) C LTR81A LTR/Gypsy (176) 1174 1106 1537314 322 34.0 7.0 2.8 chr6 14858134 14858420 (156256647) C LTR81A LTR/Gypsy (912) 438 140 1537315 439 26.2 9.8 0.0 chr6 14878048 14878172 (156236895) C MamGypLTR1a LTR/Gypsy (38) 775 616 1537350 232 24.0 24.6 6.2 chr6 14879105 14879299 (156235768) C MamGypLTR1a LTR/Gypsy (549) 233 3 1537350 264 29.5 1.3 0.0 chr6 15753366 15753443 (155361624) + MamGypLTR1b LTR/Gypsy 639 717 (65) 1538968 345 31.1 14.6 1.8 chr6 15990712 15990937 (155124130) + MamGypLTR2b LTR/Gypsy 668 922 (0) 1539374 547 25.1 1.0 5.2 chr6 16071885 16072077 (155042990) C MamGypLTR2b LTR/Gypsy (27) 895 711 1539503 360 36.6 6.4 2.9 chr6 16082460 16082833 (155032234) C MamGypLTR1b LTR/Gypsy (4) 778 392 1539524 864 29.1 15.2 2.3 chr6 16222899 16223458 (154891609) + MamGypLTR1a LTR/Gypsy 144 775 (9) 1539734 247 31.2 3.5 4.4 chr6 16798175 16798288 (154316779) C LTR81B LTR/Gypsy (754) 639 527 1540565 552 34.9 0.5 0.9 chr6 16798288 16798498 (154316569) + LTR81 LTR/Gypsy 614 823 (366) 1540566 237 26.9 13.2 6.0 chr6 16798626 16798708 (154316359) + LTR81 LTR/Gypsy 978 1066 (87) 1540566 273 26.8 24.0 2.2 chr6 16909201 16909311 (154205756) + LTR81B LTR/Gypsy 15 148 (1245) 1540739 273 26.8 24.0 2.2 chr6 16909610 16909726 (154205341) + LTR81B LTR/Gypsy 149 293 (1100) 1540739 262 29.1 13.9 7.1 chr6 16910473 16910536 (154204531) + LTR81B LTR/Gypsy 1072 1132 (261) 1540739 262 29.1 13.9 7.1 chr6 16910647 16910862 (154204205) + LTR81B LTR/Gypsy 1133 1371 (22) 1540739 429 29.1 5.5 1.6 chr6 16929783 16930015 (154185052) C LTR81B LTR/Gypsy (1018) 332 96 1540779 312 34.5 3.6 0.0 chr6 16979303 16979441 (154135626) C LTR81A LTR/Gypsy (401) 949 806 1540860 495 17.5 4.3 13.0 chr6 17012910 17013100 (154101967) + LTR81A LTR/Gypsy 10 188 (1205) 1540906 231 27.9 3.7 3.7 chr6 17013072 17013153 (154101914) + MamGypLTR2c LTR/Gypsy 19 100 (968) 1540907 359 27.5 11.7 2.1 chr6 17722418 17722562 (153392505) C MamGypLTR1c LTR/Gypsy (602) 201 43 1542149 287 24.1 3.7 0.0 chr6 18141440 18141493 (152973574) + MamGypLTR3 LTR/Gypsy 633 688 (151) 1542980 339 26.9 3.8 15.0 chr6 18557134 18557426 (152557641) C MamGypLTR3 LTR/Gypsy (2) 837 578 1543711 405 29.4 7.3 10.8 chr6 18824150 18824408 (152290659) + MamGypLTR3 LTR/Gypsy 489 738 (101) 1544073 241 26.1 1.4 1.4 chr6 19412775 19412844 (151702223) + MamGypLTR2c LTR/Gypsy 972 1041 (27) 1544816 1208 29.8 13.5 5.0 chr6 20049656 20049711 (151065356) C MamGypLTR1a LTR/Gypsy (21) 763 724 1545706 1208 29.8 13.5 5.0 chr6 20050021 20050660 (151064407) C MamGypLTR1a LTR/Gypsy (61) 723 8 1545706 786 27.7 19.2 7.2 chr6 20053083 20053258 (151061809) + LTR81B LTR/Gypsy 49 232 (1118) 1545711 786 26.8 20.9 7.4 chr6 20053287 20053602 (151061465) + LTR81B LTR/Gypsy 230 548 (845) 1545711 786 27.0 28.1 5.5 chr6 20053909 20054263 (151060804) + LTR81B LTR/Gypsy 549 1023 (370) 1545711 283 26.5 11.4 2.9 chr6 20054426 20054530 (151060537) + LTR81B LTR/Gypsy 1067 1180 (9) 1545711 494 27.9 6.0 3.5 chr6 20071650 20071931 (151043136) C LTR81B LTR/Gypsy (1095) 298 10 1545737 612 36.2 5.5 1.4 chr6 20328733 20329157 (150785910) C LTR81C LTR/Gypsy (413) 980 424 1546191 505 28.1 13.4 2.9 chr6 21265705 21265913 (149849154) C LTR81B LTR/Gypsy (199) 1194 964 1547709 227 29.9 7.5 0.0 chr6 21401271 21401337 (149713730) C MamGypLTR3 LTR/Gypsy (305) 534 463 1547915 484 33.2 10.6 4.4 chr6 22803149 22803441 (148311626) + MamGypLTR1b LTR/Gypsy 417 727 (55) 1549998 284 31.8 7.6 4.1 chr6 23006089 23006285 (148108782) C MamGypLTR1c LTR/Gypsy (36) 767 564 1550256 390 28.1 13.2 4.8 chr6 23193222 23193471 (147921596) C LTR81C LTR/Gypsy (7) 1146 876 1550477 281 33.7 12.4 4.8 chr6 23654954 23655465 (147459602) C MamGypLTR1a LTR/Gypsy (9) 775 209 1551065 272 28.8 8.7 6.9 chr6 23710689 23710919 (147404148) + LTR81B LTR/Gypsy 1108 1342 (51) 1551143 560 19.6 11.2 1.9 chr6 23915188 23915348 (147199719) C MamGypLTR2c LTR/Gypsy (28) 1040 865 1551380 292 25.4 11.3 4.5 chr6 25681254 25681430 (145433637) C LTR81B LTR/Gypsy (0) 1393 1205 1554143 305 26.7 2.8 8.5 chr6 25681506 25681679 (145433388) C LTR81B LTR/Gypsy (1068) 325 162 1554143 226 32.0 12.0 0.0 chr6 26760480 26760604 (144354463) C MamGypLTR1d LTR/Gypsy (78) 735 596 1555953 299 26.1 3.2 2.1 chr6 28271396 28271489 (142843578) C LTR81C LTR/Gypsy (0) 1153 1059 1558481 521 29.9 14.0 5.2 chr6 28984969 28985296 (142129771) + MamGypLTR3 LTR/Gypsy 466 822 (17) 1559648 276 18.1 18.8 2.1 chr6 30087455 30087550 (141027517) + LTR81A LTR/Gypsy 1067 1178 (172) 1561081 233 21.9 6.2 1.5 chr6 30277150 30277214 (140837853) C LTR81 LTR/Gypsy (38) 1151 1084 1561376 342 31.3 0.7 10.7 chr6 30478028 30478177 (140636890) C MamGypLTR3 LTR/Gypsy (244) 595 461 1561654 226 25.4 1.5 3.1 chr6 30620737 30620801 (140494266) + LTR81A LTR/Gypsy 416 479 (871) 1561899 345 28.5 6.7 4.4 chr6 30797868 30798047 (140317020) C MamGypLTR1b LTR/Gypsy (45) 737 554 1562252 284 26.3 8.6 4.3 chr6 30798369 30798507 (140316560) C MamGypLTR1b LTR/Gypsy (636) 146 2 1562252 484 23.7 5.7 1.3 chr6 30804328 30804485 (140310582) + MamGypLTR1b LTR/Gypsy 586 750 (32) 1562265 317 29.3 12.8 5.1 chr6 30807415 30807803 (140307264) C MamGypLTR1a LTR/Gypsy (297) 487 69 1562272 251 23.6 5.8 13.6 chr6 30977348 30977553 (140137514) + LTR81A LTR/Gypsy 1159 1348 (2) 1562546 254 27.4 4.1 0.0 chr6 31031196 31031268 (140083799) C MamGypLTR1a LTR/Gypsy (99) 685 610 1562618 368 26.3 3.3 3.3 chr6 32380861 32380982 (138734085) + MamGypLTR2b LTR/Gypsy 776 897 (25) 1564643 1237 27.3 9.3 2.9 chr6 32968995 32969511 (138145556) + MamGypLTR1a LTR/Gypsy 172 721 (63) 1565490 269 32.1 2.9 6.5 chr6 32983486 32983655 (138131412) C LTR81C LTR/Gypsy (165) 988 825 1565510 243 24.0 22.8 4.1 chr6 32984552 32984734 (138130333) C LTR81C LTR/Gypsy (1100) 250 30 1565510 873 22.5 5.6 5.2 chr6 33327150 33327454 (137787613) + LTR81B LTR/Gypsy 9 314 (1079) 1566001 225 27.3 5.2 0.0 chr6 33736151 33736227 (137378840) C MamGypLTR1b LTR/Gypsy (40) 742 662 1566769 250 30.4 3.5 0.9 chr6 33946884 33946999 (137168068) + MamGypLTR1d LTR/Gypsy 2 120 (693) 1567053 237 30.8 5.7 1.6 chr6 35894131 35894252 (135220815) + MamGypLTR1b LTR/Gypsy 239 365 (417) 1570904 431 29.3 13.2 7.4 chr6 36113084 36113581 (135001486) + MamGypLTR1b LTR/Gypsy 1 527 (255) 1571310 253 30.5 15.4 1.3 chr6 36114109 36114264 (135000803) + MamGypLTR1b LTR/Gypsy 513 690 (94) 1571310 349 26.0 3.1 4.3 chr6 36132743 36132903 (134982164) C MamGypLTR2c LTR/Gypsy (17) 1051 893 1571360 248 32.3 6.9 2.3 chr6 36529818 36529947 (134585120) C MamGypLTR1c LTR/Gypsy (131) 672 537 1572174 428 30.9 3.2 2.2 chr6 36617834 36618018 (134497049) C LTR81A LTR/Gypsy (15) 1335 1149 1572394 323 30.3 4.8 1.4 chr6 36618659 36618805 (134496262) C LTR81A LTR/Gypsy (1002) 348 197 1572394 424 30.7 11.3 6.7 chr6 37209147 37209534 (133905533) + MamGypLTR1b LTR/Gypsy 352 757 (25) 1573657 282 26.4 4.5 3.0 chr6 37676259 37676391 (133438676) + MamGypLTR1b LTR/Gypsy 648 782 (0) 1574471 234 26.3 1.6 8.5 chr6 38617634 38617762 (132497305) + MamGypLTR3 LTR/Gypsy 712 831 (8) 1575940 289 30.6 3.7 7.4 chr6 38900763 38900977 (132214090) C MamGypLTR3 LTR/Gypsy (148) 691 485 1576443 304 27.7 15.0 3.6 chr6 38910026 38910276 (132204791) + LTR81C LTR/Gypsy 35 332 (857) 1576457 305 23.7 26.7 1.7 chr6 38910644 38910815 (132204252) + LTR81C LTR/Gypsy 939 1153 (0) 1576457 328 24.0 12.0 3.2 chr6 39250989 39251113 (131863954) + MamGypLTR1d LTR/Gypsy 100 235 (578) 1576966 341 32.9 8.0 0.9 chr6 39255581 39255804 (131859263) C MamGypLTR3 LTR/Gypsy (61) 778 539 1576979 317 30.6 4.8 0.8 chr6 40496816 40496940 (130618127) + MamGypLTR1a LTR/Gypsy 120 249 (535) 1578693 753 24.7 0.0 4.9 chr6 40496966 40497169 (130617898) + MamGypLTR1a LTR/Gypsy 589 782 (2) 1578693 526 26.7 8.0 3.5 chr6 40708474 40708765 (130406302) C LTR81AB LTR/Gypsy (0) 1393 1037 1579060 674 22.1 0.0 5.7 chr6 40709605 40709762 (130405305) C LTR81AB LTR/Gypsy (129) 149 1 1579060 228 20.8 13.8 3.8 chr6 41577811 41577890 (129537177) + MamGypLTR2c LTR/Gypsy 311 398 (670) 1580460 601 31.8 14.4 0.8 chr6 43371599 43371972 (127743095) C MamGypLTR1a LTR/Gypsy (4) 780 356 1584070 408 26.1 2.9 4.3 chr6 44330342 44330481 (126784586) + LTR81A LTR/Gypsy 86 223 (1127) 1585741 277 16.8 16.4 2.9 chr6 44463006 44463109 (126651958) + LTR81B LTR/Gypsy 64 181 (1212) 1585977 426 29.2 12.1 1.7 chr6 44710688 44710901 (126404166) C MamGypLTR1b LTR/Gypsy (549) 235 5 1586369 257 27.5 5.6 6.9 chr6 44761915 44762074 (126352993) C LTR81A LTR/Gypsy (1127) 223 66 1586414 554 29.7 9.5 4.9 chr6 45886721 45887046 (125228021) C LTR81B LTR/Gypsy (20) 1373 1033 1587995 775 30.3 7.8 2.9 chr6 45887217 45887600 (125227467) C LTR81B LTR/Gypsy (917) 476 74 1587995 706 31.3 2.9 7.4 chr6 46242172 46242589 (124872478) + MamGypLTR2b LTR/Gypsy 14 412 (510) 1588499 895 30.6 17.7 6.7 chr6 46776202 46776856 (124338211) C MamGypLTR1c LTR/Gypsy (23) 780 54 1589343 227 36.7 3.6 5.4 chr6 47601803 47601969 (123513098) C LTR81C LTR/Gypsy (982) 171 8 1590574 314 25.7 12.8 1.0 chr6 47628584 47628685 (123486382) + MamGypLTR2c LTR/Gypsy 825 938 (130) 1590600 261 31.8 5.0 5.3 chr6 47700423 47700656 (123414411) C MamGypLTR2b LTR/Gypsy (163) 905 524 1590705 349 29.9 15.8 5.7 chr6 47767389 47767686 (123347381) C MamGypLTR2c LTR/Gypsy (708) 360 33 1590807 225 28.7 11.5 2.2 chr6 47812200 47812338 (123302729) + MamGypLTR2c LTR/Gypsy 913 1064 (4) 1590872 582 34.7 15.7 2.1 chr6 47815159 47815623 (123299444) C LTR81A LTR/Gypsy (171) 1179 652 1590876 281 25.9 4.9 1.2 chr6 48314542 48314623 (122800444) + MamGypLTR1a LTR/Gypsy 654 738 (46) 1591540 279 35.3 4.2 4.9 chr6 49608089 49608231 (121506836) C MamGypLTR3 LTR/Gypsy (74) 765 624 1593239 296 33.8 5.1 7.1 chr6 49782749 49783003 (121332064) + LTR81A LTR/Gypsy 345 594 (799) 1593464 299 29.8 5.8 1.8 chr6 49783310 49783436 (121331631) + LTR81A LTR/Gypsy 1211 1329 (21) 1593464 359 31.5 7.4 5.6 chr6 50026453 50026667 (121088400) + LTR81 LTR/Gypsy 22 240 (949) 1593764 452 27.6 5.2 1.9 chr6 50027275 50027429 (121087638) + LTR81 LTR/Gypsy 798 957 (232) 1593764 239 22.0 8.5 0.0 chr6 50027534 50027592 (121087475) + LTR81 LTR/Gypsy 1081 1144 (9) 1593764 266 40.7 6.2 3.7 chr6 50275609 50275932 (120839135) + MamGyp-int LTR/Gypsy 3615 3946 (1116) 1594062 273 30.3 2.6 0.0 chr6 50295051 50295126 (120819941) C LTR81B LTR/Gypsy (264) 1129 1052 1594091 350 31.0 4.0 1.7 chr6 50296553 50296729 (120818338) C LTR81B LTR/Gypsy (1207) 186 6 1594091 299 29.3 14.8 3.7 chr6 50746645 50746860 (120368207) + MamGypLTR1d LTR/Gypsy 574 813 (0) 1594664 387 34.6 9.3 8.5 chr6 50912295 50912834 (120202233) C MamGypLTR1c LTR/Gypsy (198) 605 62 1594874 251 21.8 7.9 3.6 chr6 51032182 51032298 (120082769) + LTR81B LTR/Gypsy 91 214 (1136) 1595037 264 37.0 8.4 4.2 chr6 51032431 51032667 (120082400) + MamGypLTR2b LTR/Gypsy 136 382 (540) 1595038 329 33.1 10.8 4.9 chr6 51032812 51033116 (120081951) + MamGypLTR2b LTR/Gypsy 523 845 (77) 1595038 354 27.9 0.9 5.5 chr6 52470291 52470400 (118644667) + LTR81A LTR/Gypsy 1246 1350 (0) 1597086 281 29.3 5.8 4.1 chr6 52511435 52511555 (118603512) + MamGypLTR1c LTR/Gypsy 48 170 (633) 1597161 361 18.6 2.2 4.4 chr6 52512433 52512522 (118602545) + MamGypLTR2b LTR/Gypsy 793 880 (42) 1597164 226 21.8 1.8 0.0 chr6 52581187 52581241 (118533826) + MamGypLTR2c LTR/Gypsy 426 481 (587) 1597269 227 22.8 29.0 0.8 chr6 52593025 52593148 (118521919) + MamGypLTR3 LTR/Gypsy 533 691 (148) 1597289 233 20.8 0.0 0.0 chr6 53310449 53310501 (117804566) + LTR81B LTR/Gypsy 143 195 (1198) 1598440 260 29.9 0.0 4.4 chr6 53310542 53310632 (117804435) + LTR81B LTR/Gypsy 148 222 (931) 1598440 557 29.8 9.1 3.7 chr6 53311290 53311672 (117803395) + LTR81B LTR/Gypsy 962 1365 (28) 1598440 265 30.2 3.5 1.1 chr6 53576925 53577011 (117538056) + LTR81A LTR/Gypsy 85 173 (1177) 1598854 235 33.6 3.8 0.9 chr6 54135908 54136012 (116979055) C MamGypLTR3 LTR/Gypsy (0) 839 732 1599643 715 26.1 4.2 10.1 chr6 54152346 54152631 (116962436) + LTR81AB LTR/Gypsy 7 275 (3) 1599665 350 34.5 9.4 0.8 chr6 54152824 54153057 (116962010) + LTR81 LTR/Gypsy 504 936 (457) 1599666 437 25.0 1.5 13.6 chr6 54398025 54398223 (116716844) + LTR81B LTR/Gypsy 33 207 (1186) 1599985 392 29.6 7.7 8.0 chr6 54399795 54400106 (116714961) + LTR81B LTR/Gypsy 879 1189 (0) 1599985 267 25.7 1.9 8.3 chr6 55281836 55281960 (115833107) C LTR81AB LTR/Gypsy (334) 1059 920 1601146 401 30.8 1.8 3.3 chr6 55282448 55282689 (115832378) C LTR81AB LTR/Gypsy (992) 358 117 1601146 448 33.7 8.7 4.3 chr6 55319015 55319290 (115795777) + MamGypLTR2c LTR/Gypsy 225 512 (556) 1601203 239 37.1 6.1 3.0 chr6 55319429 55319592 (115795475) + MamGypLTR2c LTR/Gypsy 703 871 (197) 1601203 415 34.6 13.4 5.8 chr6 55518237 55518616 (115596451) + MamGypLTR2c LTR/Gypsy 7 415 (653) 1601452 228 22.9 5.5 8.8 chr6 55519017 55519107 (115595960) + MamGypLTR2b LTR/Gypsy 700 787 (135) 1601453 342 33.7 7.0 4.2 chr6 55564125 55564338 (115550729) C LTR81C LTR/Gypsy (201) 1149 736 1601503 342 27.8 4.4 2.2 chr6 55715989 55716124 (115398943) + MamGypLTR1b LTR/Gypsy 36 174 (608) 1601696 246 35.9 0.0 0.0 chr6 55794086 55794163 (115320904) C LTR81A LTR/Gypsy (402) 948 871 1601811 584 32.1 4.5 6.4 chr6 56211690 56212210 (114902857) C MamGypLTR2c LTR/Gypsy (415) 738 209 1602375 381 26.2 10.0 4.8 chr6 56212479 56212756 (114902311) C MamGypLTR2c LTR/Gypsy (1088) 305 10 1602375 272 36.1 7.0 1.3 chr6 56248736 56249035 (114866032) C MamGypLTR1b LTR/Gypsy (3) 779 463 1602418 480 26.1 4.8 1.8 chr6 56249236 56249403 (114865664) C MamGypLTR1b LTR/Gypsy (572) 210 38 1602419 226 23.5 0.0 2.9 chr6 56620609 56620678 (114494389) + LTR81B LTR/Gypsy 164 231 (1162) 1602868 420 22.8 2.1 2.1 chr6 56726462 56726555 (114388512) + MamGypLTR1c LTR/Gypsy 101 194 (609) 1603024 269 31.7 3.6 7.8 chr6 56851308 56851526 (114263541) C MamGypLTR2c LTR/Gypsy (41) 1027 818 1603241 248 36.6 8.2 7.3 chr6 56851606 56851762 (114263305) C LTR81A LTR/Gypsy (400) 950 805 1603242 248 36.6 8.2 7.3 chr6 56852078 56852385 (114262682) C LTR81A LTR/Gypsy (546) 804 481 1603242 243 36.6 4.4 1.9 chr6 57095367 57095572 (114019495) C MamGypLTR1b LTR/Gypsy (53) 729 519 1603599 375 27.8 13.6 7.3 chr6 57632212 57632483 (113482584) + MamGypLTR1a LTR/Gypsy 214 502 (282) 1604288 419 24.7 14.1 6.1 chr6 57729465 57729547 (113385520) + LTR81B LTR/Gypsy 3 94 (1299) 1604427 419 24.7 14.1 6.1 chr6 57729911 57730024 (113385043) + LTR81B LTR/Gypsy 95 216 (1177) 1604427 301 26.3 21.9 6.8 chr6 57730263 57730572 (113384495) + LTR81B LTR/Gypsy 1037 1393 (0) 1604427 552 32.4 15.8 5.8 chr6 57749043 57749403 (113365664) + MamGypLTR1a LTR/Gypsy 387 783 (1) 1604458 265 31.7 9.7 1.9 chr6 57777947 57778049 (113337018) + LTR81B LTR/Gypsy 167 277 (876) 1604504 391 31.7 15.9 6.5 chr6 57779394 57779872 (113335195) + LTR81B LTR/Gypsy 757 1280 (113) 1604504 408 25.3 14.2 5.6 chr6 58336524 58336605 (112778462) + LTR81B LTR/Gypsy 3 93 (1300) 1605151 408 25.3 14.2 5.6 chr6 58336970 58337083 (112777984) + LTR81B LTR/Gypsy 94 216 (1177) 1605151 332 26.5 13.1 5.0 chr6 58337434 58337632 (112777435) + LTR81B LTR/Gypsy 1179 1393 (0) 1605151 596 31.9 15.2 5.3 chr6 58356187 58356547 (112758520) + MamGypLTR1a LTR/Gypsy 387 783 (1) 1605182 265 31.7 9.7 1.9 chr6 58382017 58382119 (112732948) + LTR81B LTR/Gypsy 167 277 (876) 1605226 428 29.9 15.2 7.2 chr6 58383464 58383935 (112731132) + LTR81B LTR/Gypsy 757 1266 (127) 1605226 300 28.6 4.6 4.6 chr6 62070513 62070728 (109044339) + LTR81B LTR/Gypsy 46 261 (1132) 1605721 253 22.9 5.7 0.0 chr6 62386217 62386286 (108728781) C MamGypLTR1d LTR/Gypsy (60) 753 680 1605974 322 26.4 14.9 0.0 chr6 62386608 62386694 (108728373) C MamGypLTR2b LTR/Gypsy (676) 246 147 1605975 309 35.9 6.0 3.5 chr6 63337954 63338236 (107776831) + MamGypLTR3 LTR/Gypsy 545 834 (5) 1607155 336 29.4 2.4 0.8 chr6 63490918 63491044 (107624023) C MamGypLTR1a LTR/Gypsy (4) 780 652 1607363 287 29.4 8.9 3.2 chr6 63653065 63653187 (107461880) C MamGypLTR1d LTR/Gypsy (10) 803 674 1607497 695 37.9 6.2 5.7 chr6 63803257 63804076 (107310991) + LTR81B LTR/Gypsy 368 1191 (202) 1607676 243 24.7 6.2 0.0 chr6 63804180 63804260 (107310807) + LTR81 LTR/Gypsy 1095 1180 (9) 1607677 534 33.9 4.2 4.3 chr6 64753270 64753606 (106361461) C LTR81 LTR/Gypsy (602) 791 402 1609085 320 24.3 16.7 1.3 chr6 64753624 64753773 (106361294) C LTR81 LTR/Gypsy (81) 197 25 1609085 551 27.1 14.4 1.0 chr6 65128376 65128631 (105986436) + MamGypLTR1d LTR/Gypsy 525 813 (0) 1609569 342 38.7 7.6 3.9 chr6 65452671 65453079 (105661988) + MamGypLTR1b LTR/Gypsy 359 782 (0) 1609970 255 19.1 9.6 5.3 chr6 65826661 65826754 (105288313) + MamGypLTR2b LTR/Gypsy 814 911 (11) 1610434 284 32.6 8.8 2.6 chr6 66004182 66004373 (105110694) + MamGypLTR3 LTR/Gypsy 633 836 (3) 1610666 867 36.0 10.2 3.3 chr6 66022448 66023058 (105092009) C MamGyp-int LTR/Gypsy (896) 4166 3514 1610692 957 36.4 8.0 2.0 chr6 66024424 66024454 (105090613) C MamGyp-int LTR/Gypsy (2033) 3029 2991 1610692 957 36.4 8.0 2.0 chr6 66024503 66025155 (105089912) C MamGyp-int LTR/Gypsy (2072) 2990 2304 1610692 263 37.9 4.4 7.0 chr6 66119209 66119480 (104995587) + MamGypLTR3 LTR/Gypsy 480 744 (95) 1610825 250 27.0 3.4 0.0 chr6 66192335 66192423 (104922644) + MamGypLTR1c LTR/Gypsy 669 760 (43) 1610938 228 31.5 3.8 9.5 chr6 66307513 66307670 (104807397) C MamGypLTR1b LTR/Gypsy (159) 623 475 1611117 294 31.9 4.6 4.0 chr6 67005174 67005346 (104109721) C LTR81A LTR/Gypsy (1034) 316 143 1612017 326 39.5 6.3 3.0 chr6 67492873 67493143 (103621924) + MamGypLTR1a LTR/Gypsy 286 565 (219) 1612678 363 33.3 7.3 2.7 chr6 67890558 67890816 (103224251) + MamGypLTR2b LTR/Gypsy 615 885 (37) 1613183 248 30.0 3.3 7.3 chr6 69404790 69404898 (101710169) C MamGypLTR1c LTR/Gypsy (607) 196 91 1615156 248 30.0 3.3 7.3 chr6 69405069 69405109 (101709958) C MamGypLTR1c LTR/Gypsy (713) 90 52 1615156 449 31.2 9.3 4.0 chr6 69405955 69406201 (101708866) C LTR81A LTR/Gypsy (965) 385 126 1615158 371 25.9 2.8 2.8 chr6 69814995 69815137 (101299930) C MamGypLTR1b LTR/Gypsy (18) 764 622 1615730 234 26.9 5.2 4.1 chr6 69877264 69877360 (101237707) C MamGypLTR2b LTR/Gypsy (2) 920 823 1615821 1120 29.9 10.6 0.2 chr6 70347697 70348158 (100766909) + MamGyp-int LTR/Gypsy 2429 2938 (2124) 1616371 295 23.5 18.4 1.0 chr6 70378620 70378762 (100736305) C MamGypLTR1c LTR/Gypsy (6) 778 618 1616412 514 33.5 10.8 3.5 chr6 70529977 70530291 (100584776) + MamGypLTR3 LTR/Gypsy 491 828 (11) 1616643 370 26.5 4.9 8.7 chr6 70558324 70558484 (100556583) + LTR81C LTR/Gypsy 11 163 (1026) 1616685 409 28.4 13.4 7.2 chr6 70558793 70559118 (100555949) + LTR81C LTR/Gypsy 803 1137 (16) 1616685 348 23.7 34.5 0.0 chr6 70766488 70766641 (100348426) C LTR81A LTR/Gypsy (1102) 248 42 1616930 472 31.2 4.5 3.7 chr6 71101765 71102007 (100013060) C LTR81B LTR/Gypsy (921) 472 228 1617309 502 28.3 7.2 3.1 chr6 71325396 71325545 (99789522) + MamGypLTR1b LTR/Gypsy 441 599 (183) 1617654 502 28.3 7.2 3.1 chr6 71325836 71325877 (99789190) + MamGypLTR1b LTR/Gypsy 600 641 (141) 1617654 820 32.8 6.9 2.2 chr6 71870613 71871018 (99244049) C MamGypLTR1d LTR/Gypsy (0) 813 389 1618354 956 31.5 7.9 6.5 chr6 72023273 72023853 (99091214) C LTR81 LTR/Gypsy (0) 1189 601 1618577 633 34.3 5.9 2.4 chr6 72033374 72033746 (99081321) C MamGypLTR1b LTR/Gypsy (27) 755 370 1618591 538 29.4 6.6 3.7 chr6 72033996 72034267 (99080800) C MamGypLTR1b LTR/Gypsy (417) 367 88 1618591 349 30.5 7.1 7.1 chr6 72440566 72440833 (98674234) + LTR81B LTR/Gypsy 7 274 (1119) 1619126 459 28.9 5.5 0.0 chr6 72547974 72548101 (98566966) C MamGypLTR1c LTR/Gypsy (0) 813 679 1619235 597 31.3 9.1 5.1 chr6 72548278 72548627 (98566440) C MamGypLTR1c LTR/Gypsy (427) 376 13 1619235 725 28.1 3.1 5.3 chr6 72704444 72704843 (98410224) + LTR81AB LTR/Gypsy 1 397 (996) 1619438 348 22.9 0.0 0.7 chr6 72800513 72800586 (98314481) C MamGypLTR1b LTR/Gypsy (89) 693 625 1619567 339 33.9 7.0 3.7 chr6 72837127 72837313 (98277754) C MamGypLTR1a LTR/Gypsy (55) 729 537 1619604 237 28.4 3.0 0.0 chr6 72837334 72837400 (98277667) C MamGypLTR1a LTR/Gypsy (308) 476 408 1619604 257 32.5 2.4 6.4 chr6 73233186 73233310 (97881757) C MamGypLTR3 LTR/Gypsy (74) 765 646 1620122 261 31.5 6.2 5.2 chr6 73849268 73849461 (97265606) C MamGypLTR1d LTR/Gypsy (610) 203 8 1620910 322 27.8 2.2 3.6 chr6 74674462 74674599 (96440468) C MamGypLTR1a LTR/Gypsy (647) 137 2 1622580 259 36.6 2.3 4.7 chr6 74895772 74895986 (96219081) + MamGypLTR3 LTR/Gypsy 437 646 (193) 1622850 269 21.3 5.4 6.9 chr6 74960648 74960782 (96154285) C MamGypLTR2b LTR/Gypsy (89) 833 759 1622913 312 27.2 4.2 4.2 chr6 75440188 75440306 (95674761) C MamGypLTR2c LTR/Gypsy (28) 894 776 1623497 462 31.9 12.2 0.8 chr6 75440640 75440876 (95674191) C MamGypLTR2c LTR/Gypsy (544) 524 261 1623497 566 32.5 4.0 5.9 chr6 75520344 75520647 (95594420) C MamGypLTR1b LTR/Gypsy (0) 782 485 1623596 266 39.5 7.0 2.3 chr6 75551607 75551777 (95563290) + MamGypLTR1b LTR/Gypsy 461 639 (143) 1623639 307 23.5 6.8 2.5 chr6 75592185 75592302 (95522765) + MamGypLTR1b LTR/Gypsy 651 773 (9) 1623689 525 26.2 2.0 0.7 chr6 75626075 75626224 (95488843) C LTR81C LTR/Gypsy (125) 1028 877 1623723 280 35.7 12.4 1.6 chr6 75659125 75659479 (95455588) + MamGypLTR1b LTR/Gypsy 261 663 (119) 1623769 393 28.1 12.9 7.3 chr6 76052101 76052442 (95062625) C MamGypLTR2b LTR/Gypsy (7) 915 555 1624230 462 23.8 7.3 3.9 chr6 76220489 76220667 (94894400) C LTR81B LTR/Gypsy (0) 1393 1209 1624467 293 24.3 1.2 8.6 chr6 76221547 76221627 (94893440) C LTR81B LTR/Gypsy (1042) 351 277 1624467 382 22.0 0.9 7.4 chr6 76221762 76221869 (94893198) C LTR81B LTR/Gypsy (160) 118 18 1624467 504 28.9 4.7 8.9 chr6 76943144 76943546 (94171521) C MamGypLTR2c LTR/Gypsy (17) 1051 666 1625594 345 29.1 9.4 0.7 chr6 77023092 77023240 (94091827) C MamGypLTR1c LTR/Gypsy (0) 803 642 1625684 760 24.2 7.0 1.4 chr6 77264362 77264575 (93850492) C MamGypLTR2c LTR/Gypsy (2) 1066 841 1625952 270 33.5 5.7 4.0 chr6 77636322 77636498 (93478569) C MamGypLTR1a LTR/Gypsy (520) 264 85 1626399 318 29.2 1.7 2.9 chr6 78205292 78205418 (92909649) + MamGypLTR2b LTR/Gypsy 747 873 (49) 1627052 318 29.2 1.7 2.9 chr6 78205692 78205734 (92909333) + MamGypLTR2b LTR/Gypsy 874 915 (7) 1627052 267 24.6 9.3 2.3 chr6 78329523 78329651 (92785416) C LTR81B LTR/Gypsy (1146) 247 110 1627212 321 32.8 13.8 5.0 chr6 78798843 78799124 (92315943) + MamGypLTR1d LTR/Gypsy 37 343 (470) 1627736 258 36.5 6.1 4.5 chr6 78799219 78799531 (92315536) + MamGypLTR1d LTR/Gypsy 307 624 (189) 1627736 339 19.7 2.8 0.0 chr6 78808501 78808571 (92306496) + MamGypLTR2c LTR/Gypsy 54 126 (942) 1627749 246 39.3 1.9 4.8 chr6 78981421 78981626 (92133441) + MamGypLTR2b LTR/Gypsy 89 288 (634) 1627959 241 24.6 8.2 0.0 chr6 79071985 79072045 (92043022) C MamGypLTR1c LTR/Gypsy (659) 144 79 1628066 989 29.4 20.8 2.0 chr6 79872007 79872558 (91242509) C LTR81A LTR/Gypsy (59) 1291 636 1629056 267 21.8 10.6 7.5 chr6 80054071 80054258 (91060809) + LTR81B LTR/Gypsy 1169 1362 (31) 1629296 241 33.3 10.4 1.9 chr6 80323871 80324081 (90790986) + MamGypLTR1d LTR/Gypsy 1 229 (584) 1629670 296 26.2 7.2 0.0 chr6 80521708 80521833 (90593234) C MamGypLTR1b LTR/Gypsy (26) 758 618 1629971 258 14.3 14.0 9.0 chr6 80522455 80522554 (90592513) C MamGypLTR1b LTR/Gypsy (644) 138 34 1629974 325 32.2 15.5 2.5 chr6 80693314 80693552 (90421515) + MamGypLTR1a LTR/Gypsy 363 632 (152) 1630209 242 22.7 11.2 1.1 chr6 81145772 81145860 (89969207) C LTR81B LTR/Gypsy (1182) 211 114 1630772 569 35.0 12.8 3.1 chr6 81253481 81253964 (89861103) + MamGypLTR1d LTR/Gypsy 280 810 (3) 1630908 274 24.1 4.0 6.5 chr6 81269907 81270030 (89845037) + MamGypLTR2b LTR/Gypsy 702 822 (100) 1630926 367 30.7 9.5 7.0 chr6 82553259 82553542 (88561525) + LTR81C LTR/Gypsy 766 1056 (97) 1632517 389 25.2 1.8 2.6 chr6 82833688 82833801 (88281266) + MamGypLTR1d LTR/Gypsy 8 120 (693) 1632843 285 25.7 7.6 3.8 chr6 82833800 82833904 (88281163) + MamGypLTR1d LTR/Gypsy 83 191 (622) 1632843 415 28.3 7.4 2.2 chr6 82987506 82987685 (88127382) C LTR81B LTR/Gypsy (996) 397 117 1633119 440 29.4 8.9 3.2 chr6 83307690 83307896 (87807171) C MamGypLTR1b LTR/Gypsy (67) 715 499 1633526 491 26.7 4.1 0.0 chr6 83307917 83308062 (87807005) C MamGypLTR1b LTR/Gypsy (624) 158 7 1633526 281 31.3 7.1 1.2 chr6 83357041 83357208 (87757859) C MamGypLTR1a LTR/Gypsy (160) 624 447 1633595 533 33.1 6.9 4.9 chr6 83357221 83357363 (87757704) C MamGypLTR1a LTR/Gypsy (393) 391 249 1633595 533 33.1 6.9 4.9 chr6 83357640 83357841 (87757226) C MamGypLTR1a LTR/Gypsy (536) 248 39 1633595 320 23.7 6.3 2.1 chr6 83578211 83578352 (87536715) C LTR81B LTR/Gypsy (1143) 250 103 1633865 266 20.9 17.4 3.7 chr6 83578372 83578480 (87536587) C LTR81B LTR/Gypsy (1211) 139 16 1633865 354 25.3 15.7 0.7 chr6 84369527 84369673 (86745394) + MamGypLTR2c LTR/Gypsy 61 229 (839) 1634982 230 30.4 4.8 2.9 chr6 84370055 84370159 (86744908) + MamGypLTR2c LTR/Gypsy 921 1027 (41) 1634982 428 27.3 13.0 6.6 chr6 85298502 85298878 (85816189) + MamGypLTR1b LTR/Gypsy 371 771 (11) 1636193 957 33.8 7.3 5.4 chr6 85642686 85643317 (85471750) C MamGypLTR1a LTR/Gypsy (0) 784 141 1636621 307 22.9 10.4 0.9 chr6 85643585 85643690 (85471377) C MamGypLTR1a LTR/Gypsy (666) 116 1 1636621 317 25.8 6.2 0.0 chr6 86413077 86413173 (84701894) C MamGypLTR1a LTR/Gypsy (0) 784 682 1637643 274 30.5 4.5 9.6 chr6 86516428 86516583 (84598484) C LTR81A LTR/Gypsy (133) 1020 873 1637811 403 35.1 2.9 3.4 chr6 86521822 86522060 (84593007) C LTR81A LTR/Gypsy (588) 762 525 1637811 232 23.2 16.7 6.7 chr6 86522273 86522392 (84592675) C LTR81AB LTR/Gypsy (31) 247 116 1637823 268 30.4 5.0 5.4 chr6 86677384 86677623 (84437444) C LTR81B LTR/Gypsy (1069) 324 86 1637961 259 30.6 16.1 5.4 chr6 86783516 86783795 (84331272) C MamGypLTR3 LTR/Gypsy (172) 667 358 1638060 298 15.3 6.8 2.7 chr6 86853255 86853328 (84261739) C MamGypLTR1a LTR/Gypsy (705) 79 3 1638125 243 35.3 10.4 2.6 chr6 86897844 86898035 (84217032) + MamGypLTR2b LTR/Gypsy 153 359 (563) 1638176 286 29.2 39.5 1.3 chr6 87136162 87136396 (83978671) C LTR81AB LTR/Gypsy (1068) 325 1 1638429 285 27.8 4.2 2.5 chr6 87159469 87159586 (83955481) C MamGypLTR2c LTR/Gypsy (40) 1028 909 1638470 310 21.7 18.7 4.3 chr6 87471805 87472024 (83643043) C LTR81C LTR/Gypsy (20) 1373 1063 1638811 447 32.7 11.4 10.2 chr6 87721375 87721942 (83393125) + MamGypLTR1d LTR/Gypsy 52 626 (187) 1639111 476 31.2 6.9 2.3 chr6 88244506 88244767 (82870300) + MamGypLTR1b LTR/Gypsy 359 632 (150) 1639890 512 26.6 5.2 13.9 chr6 88426709 88427110 (82687957) + MamGypLTR1d LTR/Gypsy 1 367 (446) 1640241 678 27.5 10.8 7.3 chr6 88486238 88486433 (82628634) + MamGypLTR2c LTR/Gypsy 669 877 (191) 1640366 678 27.5 10.8 7.3 chr6 88486755 88486929 (82628138) + MamGypLTR2c LTR/Gypsy 878 1053 (15) 1640366 350 26.2 1.9 0.9 chr6 88578092 88578199 (82536868) C MamGypLTR1d LTR/Gypsy (22) 781 673 1640533 784 30.5 14.0 5.5 chr6 88578220 88578798 (82536269) C MamGypLTR1d LTR/Gypsy (185) 628 1 1640533 279 22.7 16.9 4.0 chr6 88664586 88664709 (82450358) + LTR81B LTR/Gypsy 11 150 (1243) 1640647 404 26.6 3.6 9.2 chr6 89195577 89195771 (81919296) + MamGypLTR1b LTR/Gypsy 24 207 (575) 1641334 538 28.4 4.4 2.2 chr6 89196031 89196210 (81918857) + MamGypLTR1b LTR/Gypsy 565 748 (34) 1641334 247 21.9 0.0 1.5 chr6 89654470 89654534 (81460533) C MamGypLTR2b LTR/Gypsy (36) 886 823 1641979 488 34.6 6.6 0.5 chr6 89684946 89685157 (81429910) C MamGyp-int LTR/Gypsy (4094) 968 744 1642023 699 28.2 4.9 11.9 chr6 89691174 89691226 (81423841) C MamGypLTR1c LTR/Gypsy (0) 803 754 1642038 699 28.2 4.9 11.9 chr6 89691486 89691570 (81423497) C MamGypLTR1c LTR/Gypsy (50) 753 677 1642038 699 28.2 4.9 11.9 chr6 89691861 89692164 (81422903) C MamGypLTR1c LTR/Gypsy (127) 676 389 1642038 305 26.5 39.4 2.1 chr6 89758658 89758950 (81356117) C LTR81A LTR/Gypsy (0) 1350 950 1642196 263 36.7 0.0 0.8 chr6 89758999 89759127 (81355940) C LTR81C LTR/Gypsy (991) 162 35 1642197 789 29.8 14.7 6.4 chr6 89991425 89992195 (81122872) C LTR81 LTR/Gypsy (315) 1078 148 1642630 234 28.9 21.1 3.4 chr6 91454637 91454840 (79660227) C MamGypLTR2c LTR/Gypsy (147) 921 682 1644920 252 29.1 19.0 3.1 chr6 91470942 91471136 (79643931) + MamGypLTR1b LTR/Gypsy 520 745 (37) 1644942 258 30.7 16.5 0.5 chr6 91540217 91540422 (79574645) + LTR81C LTR/Gypsy 477 715 (474) 1645030 381 30.4 5.9 12.2 chr6 91540469 91540805 (79574262) + LTR81C LTR/Gypsy 807 1122 (31) 1645030 554 29.8 8.7 6.8 chr6 91654751 91654924 (79460143) C MamGypLTR1b LTR/Gypsy (24) 758 596 1645155 554 29.8 8.7 6.8 chr6 91655004 91655149 (79459918) C MamGypLTR1b LTR/Gypsy (187) 595 432 1645155 322 23.2 2.3 6.8 chr6 91655286 91655373 (79459694) C MamGypLTR1b LTR/Gypsy (580) 202 119 1645155 228 35.5 9.2 7.8 chr6 92051360 92051707 (79063360) C MamGypLTR2b LTR/Gypsy (351) 571 219 1645683 546 25.9 2.4 4.3 chr6 92065237 92065446 (79049621) C MamGypLTR2b LTR/Gypsy (2) 920 715 1645698 280 32.2 7.6 11.3 chr6 92167816 92168106 (78946961) + LTR81B LTR/Gypsy 190 469 (924) 1645830 280 35.9 11.8 7.6 chr6 92634449 92635420 (78479647) C MamGypLTR2c LTR/Gypsy (9) 1059 47 1646413 303 38.9 7.1 3.4 chr6 92686243 92686658 (78428409) + LTR81C LTR/Gypsy 308 942 (408) 1646469 463 30.7 6.2 0.5 chr6 92785416 92785608 (78329459) + MamGypLTR1c LTR/Gypsy 9 212 (591) 1646608 250 24.1 0.0 0.0 chr6 92785759 92785812 (78329255) + MamGypLTR1c LTR/Gypsy 360 413 (400) 1646608 271 28.4 6.5 6.5 chr6 93295928 93296051 (77819016) C MamGypLTR1a LTR/Gypsy (36) 748 625 1647218 311 33.5 4.3 3.2 chr6 93880789 93880976 (77234091) C MamGypLTR2c LTR/Gypsy (56) 1012 823 1647923 555 37.9 5.5 3.6 chr6 93881530 93881948 (77233119) C MamGypLTR2c LTR/Gypsy (594) 474 48 1647923 256 30.3 14.3 0.8 chr6 93900299 93900431 (77214636) C MamGypLTR1d LTR/Gypsy (55) 758 608 1647952 234 29.4 16.2 0.0 chr6 94572137 94572204 (76542863) C MamGypLTR3 LTR/Gypsy (259) 580 502 1648781 251 26.7 5.3 0.0 chr6 94736922 94736996 (76378071) C MamGypLTR1d LTR/Gypsy (2) 811 733 1649006 599 32.3 3.4 5.5 chr6 96108858 96109237 (75005830) + LTR81B LTR/Gypsy 1 372 (1021) 1650547 361 36.5 2.9 3.4 chr6 96109255 96109458 (75005609) + LTR81B LTR/Gypsy 473 675 (718) 1650547 462 31.0 3.8 1.1 chr6 96110130 96110315 (75004752) + LTR81B LTR/Gypsy 1200 1390 (3) 1650547 298 28.2 5.8 4.7 chr6 96150669 96150858 (74964209) C LTR81B LTR/Gypsy (2) 1391 1200 1650602 533 23.7 8.9 2.0 chr6 96152332 96152533 (74962534) C LTR81B LTR/Gypsy (1087) 306 91 1650602 394 30.4 2.4 4.2 chr6 96298003 96298215 (74816852) + MamGypLTR2b LTR/Gypsy 714 922 (0) 1650760 277 23.9 2.7 13.3 chr6 96625097 96625246 (74489821) C LTR81B LTR/Gypsy (1221) 172 39 1651213 390 35.4 0.0 0.8 chr6 97180328 97180455 (73934612) C MamGypLTR2c LTR/Gypsy (540) 528 402 1651876 308 25.0 0.0 16.8 chr6 97180624 97180724 (73934343) C LTR81AB LTR/Gypsy (130) 148 65 1651877 531 36.7 2.6 2.6 chr6 97189485 97189786 (73925281) + MamGypLTR1b LTR/Gypsy 477 778 (4) 1651890 263 27.9 9.4 1.9 chr6 97310594 97310699 (73804368) C MamGypLTR1b LTR/Gypsy (263) 519 406 1652051 282 26.9 11.6 0.8 chr6 97388427 97388625 (73726442) + MamGypLTR1d LTR/Gypsy 567 810 (3) 1652149 310 24.2 15.5 7.5 chr6 98686408 98686568 (72428499) C MamGypLTR1d LTR/Gypsy (624) 189 16 1653804 359 34.1 4.2 5.3 chr6 98763810 98763998 (72351069) C MamGyp-int LTR/Gypsy (558) 4504 4318 1653922 240 28.4 6.5 9.0 chr6 100231636 100231685 (70883382) + MamGypLTR2c LTR/Gypsy 727 765 (303) 1655938 240 28.4 6.5 9.0 chr6 100232041 100232299 (70882768) + MamGypLTR2c LTR/Gypsy 766 1028 (40) 1655938 315 29.8 11.3 9.2 chr6 100269814 100270086 (70844981) + MamGypLTR1a LTR/Gypsy 365 647 (137) 1656005 315 29.8 11.3 9.2 chr6 100270395 100270501 (70844566) + MamGypLTR1a LTR/Gypsy 648 753 (31) 1656005 262 20.2 2.3 9.2 chr6 100321969 100322055 (70793012) + LTR81B LTR/Gypsy 224 304 (1089) 1656077 245 32.5 8.8 3.3 chr6 100323377 100323537 (70791530) + LTR81A LTR/Gypsy 891 1058 (131) 1656079 270 31.5 3.2 0.2 chr6 100323890 100324001 (70791066) + LTR81A LTR/Gypsy 1233 1340 (10) 1656079 947 31.0 8.5 5.4 chr6 100550692 100551230 (70563837) C MamGypLTR2c LTR/Gypsy (64) 1004 449 1656371 254 23.6 0.0 6.5 chr6 100551889 100551965 (70563102) C MamGypLTR2c LTR/Gypsy (646) 422 351 1656371 290 31.1 5.7 7.7 chr6 100650848 100651056 (70464011) C LTR81AB LTR/Gypsy (67) 211 7 1656498 247 29.4 11.8 0.0 chr6 100764049 100764133 (70350934) + MamGypLTR1b LTR/Gypsy 5 99 (683) 1656660 233 25.0 3.9 0.0 chr6 101761113 101761164 (69353903) C MamGypLTR1b LTR/Gypsy (329) 453 400 1657911 474 35.5 9.6 2.6 chr6 101791515 101791826 (69323241) C MamGyp-int LTR/Gypsy (1301) 3761 3428 1657940 1208 35.8 8.0 2.2 chr6 101791900 101792704 (69322363) C MamGyp-int LTR/Gypsy (1732) 3330 2480 1657940 396 36.0 6.4 9.1 chr6 101792708 101793159 (69321908) + MamGypLTR1a LTR/Gypsy 202 641 (143) 1657941 263 24.7 8.1 6.0 chr6 101880536 101880720 (69234347) + LTR81B LTR/Gypsy 83 271 (1122) 1658053 314 21.4 5.3 5.3 chr6 102730918 102731011 (68384056) C LTR81C LTR/Gypsy (6) 1147 1054 1659219 282 27.1 7.4 4.4 chr6 104315198 104315332 (66799735) C LTR81B LTR/Gypsy (45) 1348 1210 1661249 248 23.3 3.0 4.5 chr6 104629365 104629470 (66485597) C MamGypLTR1b LTR/Gypsy (682) 102 2 1661643 273 30.7 16.9 1.1 chr6 104772762 104772939 (66342128) + MamGypLTR2b LTR/Gypsy 527 732 (190) 1661807 249 22.1 2.9 1.4 chr6 104772963 104773031 (66342036) + MamGypLTR2b LTR/Gypsy 806 875 (47) 1661807 246 31.7 7.2 1.2 chr6 104865905 104865987 (66249080) C LTR81 LTR/Gypsy (295) 894 807 1661931 368 22.8 4.2 3.2 chr6 104978403 104978497 (66136570) C LTR81A LTR/Gypsy (1208) 142 47 1662075 589 23.0 13.0 4.7 chr6 105709333 105709524 (65405543) + LTR81A LTR/Gypsy 96 303 (1047) 1663189 282 28.5 15.4 2.5 chr6 105709875 105710036 (65405031) + LTR81A LTR/Gypsy 579 761 (392) 1663189 404 25.3 8.2 2.6 chr6 106023886 106024080 (65090987) + MamGypLTR1d LTR/Gypsy 9 214 (599) 1663602 562 30.8 5.7 7.3 chr6 106029408 106029898 (65085169) C MamGypLTR1d LTR/Gypsy (322) 491 9 1663613 342 34.4 9.7 1.9 chr6 107187077 107187334 (63927733) + MamGypLTR2c LTR/Gypsy 174 451 (617) 1665375 359 28.2 9.1 8.1 chr6 107187431 107187739 (63927328) + MamGypLTR2c LTR/Gypsy 641 952 (116) 1665375 531 35.2 6.5 1.8 chr6 107189042 107189316 (63925751) C MamGypLTR2c LTR/Gypsy (531) 537 250 1665378 363 21.4 9.1 10.2 chr6 107234177 107234287 (63880780) C MamGypLTR1c LTR/Gypsy (618) 185 79 1665448 363 21.4 9.1 10.2 chr6 107234578 107234652 (63880415) C MamGypLTR1c LTR/Gypsy (725) 78 1 1665448 230 24.8 11.7 2.3 chr6 107447132 107447259 (63667808) C MamGypLTR1d LTR/Gypsy (223) 590 451 1665913 537 23.6 7.7 6.7 chr6 107448201 107448409 (63666658) C MamGypLTR1d LTR/Gypsy (584) 229 19 1665913 289 32.1 13.3 5.6 chr6 107802131 107802506 (63312561) C MamGypLTR2c LTR/Gypsy (599) 469 65 1666591 348 27.3 7.8 6.0 chr6 109130257 109130474 (61984593) C LTR81B LTR/Gypsy (86) 1067 846 1668768 725 26.5 7.3 5.0 chr6 109131445 109131746 (61983321) C LTR81B LTR/Gypsy (1082) 311 3 1668768 356 24.4 5.5 10.0 chr6 109625372 109625492 (61489575) C MamGypLTR2c LTR/Gypsy (101) 967 849 1669544 356 25.6 6.1 11.2 chr6 109625987 109626112 (61488955) C MamGypLTR2c LTR/Gypsy (220) 848 777 1669544 512 27.6 26.5 4.4 chr6 109626170 109626489 (61488578) C MamGypLTR2c LTR/Gypsy (677) 391 2 1669544 272 27.2 11.3 3.5 chr6 109821384 109821524 (61293543) + MamGypLTR2c LTR/Gypsy 802 953 (115) 1669847 311 31.3 17.7 4.7 chr6 109829962 109830283 (61284784) + MamGypLTR3 LTR/Gypsy 476 839 (0) 1669862 514 25.9 4.2 0.0 chr6 109926595 109926737 (61188330) + MamGypLTR1b LTR/Gypsy 1 149 (633) 1669968 419 25.9 14.6 7.5 chr6 109978144 109978410 (61136657) + LTR81B LTR/Gypsy 1082 1367 (26) 1670054 322 29.1 12.7 0.8 chr6 111271284 111271401 (59843666) + MamGypLTR1a LTR/Gypsy 1 132 (652) 1672196 402 33.3 13.9 2.3 chr6 111271943 111272157 (59842910) + MamGypLTR1a LTR/Gypsy 341 580 (202) 1672196 439 27.5 9.7 1.4 chr6 111272170 111272313 (59842754) + MamGypLTR1a LTR/Gypsy 623 778 (6) 1672196 424 27.6 5.1 11.1 chr6 112178788 112179040 (58936027) C MamGypLTR2c LTR/Gypsy (1) 1067 830 1673735 269 31.9 13.2 7.9 chr6 112179086 112179402 (58935665) C LTR81A LTR/Gypsy (354) 996 663 1673736 228 36.1 11.2 4.2 chr6 112179444 112179773 (58935294) C MamGypLTR2c LTR/Gypsy (713) 355 3 1673737 303 20.6 12.3 9.4 chr6 112179818 112179988 (58935079) C LTR81A LTR/Gypsy (1172) 178 3 1673738 285 27.9 20.4 1.5 chr6 112240031 112240232 (58874835) C MamGypLTR1a LTR/Gypsy (79) 724 469 1673834 387 23.0 11.6 8.1 chr6 112240365 112240505 (58874562) C MamGypLTR1a LTR/Gypsy (591) 193 44 1673834 240 21.8 12.4 9.5 chr6 112240853 112240868 (58874199) C MamGypLTR1a LTR/Gypsy (766) 47 34 1673834 456 32.0 26.0 2.8 chr6 112362971 112363359 (58751708) + MamGypLTR1a LTR/Gypsy 303 781 (3) 1674014 227 26.3 4.8 8.7 chr6 112370019 112370122 (58744945) C MamGypLTR1b LTR/Gypsy (61) 723 624 1674024 240 24.5 5.6 4.7 chr6 112370331 112370437 (58744630) C MamGypLTR1b LTR/Gypsy (338) 446 339 1674024 417 21.9 6.3 9.1 chr6 112370471 112370704 (58744363) C MamGypLTR1b LTR/Gypsy (546) 238 2 1674024 262 30.1 1.2 1.2 chr6 112675831 112675914 (58439153) C MamGyp-int LTR/Gypsy (4234) 828 745 1674444 512 37.8 4.8 2.0 chr6 112712849 112713286 (58401781) + MamGyp-int LTR/Gypsy 2035 2484 (2578) 1674481 465 28.6 5.7 4.2 chr6 112730436 112730583 (58384484) + MamGypLTR1c LTR/Gypsy 589 742 (61) 1674506 465 28.6 5.7 4.2 chr6 112730850 112730912 (58384155) + MamGypLTR1c LTR/Gypsy 743 803 (0) 1674506 493 34.0 5.4 3.9 chr6 113117411 113117741 (57997326) C MamGypLTR2c LTR/Gypsy (40) 1028 693 1675006 537 33.3 6.7 2.6 chr6 113153998 113154339 (57960728) C MamGypLTR2b LTR/Gypsy (0) 922 567 1675054 537 25.7 17.6 3.9 chr6 113580083 113580439 (57534628) C LTR81B LTR/Gypsy (11) 1382 977 1675616 1001 31.1 3.0 4.5 chr6 113622073 113622469 (57492598) C MamGypLTR1a LTR/Gypsy (48) 736 346 1675672 451 32.1 12.8 1.4 chr6 114302081 114302377 (56812690) C MamGypLTR3 LTR/Gypsy (14) 825 495 1676853 703 29.8 7.0 3.9 chr6 114574925 114575301 (56539766) + MamGypLTR1c LTR/Gypsy 3 379 (434) 1677246 378 30.6 4.6 3.3 chr6 114575354 114575561 (56539506) + MamGypLTR1c LTR/Gypsy 578 808 (5) 1677246 378 30.8 12.3 0.6 chr6 114944415 114944584 (56170483) C MamGypLTR1c LTR/Gypsy (1) 802 613 1677759 254 23.6 1.8 3.5 chr6 115100198 115100254 (56014813) C MamGyp-int LTR/Gypsy (1229) 3833 3778 1677956 345 34.9 7.3 0.7 chr6 115101798 115101947 (56013120) C MamGyp-int LTR/Gypsy (3335) 1727 1568 1677956 318 23.7 2.1 3.1 chr6 115610063 115610158 (55504909) C MamGypLTR1c LTR/Gypsy (3) 800 706 1678535 935 31.3 2.5 5.6 chr6 115992004 115992117 (55122950) + MamGypLTR1a LTR/Gypsy 431 545 (239) 1678988 935 31.3 2.5 5.6 chr6 115992162 115992405 (55122662) + MamGypLTR1a LTR/Gypsy 546 778 (6) 1678988 270 32.5 6.0 4.5 chr6 116053630 116053829 (55061238) C MamGyp-int LTR/Gypsy (2825) 2237 2035 1679065 290 31.2 4.9 2.1 chr6 116250493 116250636 (54864431) + MamGypLTR2b LTR/Gypsy 163 310 (612) 1679322 430 33.2 10.1 2.7 chr6 116396082 116396378 (54718689) C MamGypLTR2c LTR/Gypsy (693) 375 57 1679511 375 29.0 2.1 1.4 chr6 117168984 117169123 (53945944) + MamGypLTR2c LTR/Gypsy 915 1055 (13) 1680564 489 25.0 0.8 1.7 chr6 117481545 117481662 (53633405) C MamGypLTR2c LTR/Gypsy (5) 1063 947 1680954 1244 30.8 6.9 1.9 chr6 117482391 117482910 (53632157) C MamGypLTR2c LTR/Gypsy (500) 568 23 1680954 740 27.4 10.9 4.1 chr6 117623236 117623601 (53491466) C LTR81B LTR/Gypsy (12) 1381 991 1681124 253 24.4 7.1 1.2 chr6 117624230 117624320 (53490747) C LTR81B LTR/Gypsy (1115) 278 185 1681124 294 31.5 3.4 2.0 chr6 117712349 117712494 (53402573) + MamGypLTR1c LTR/Gypsy 86 233 (570) 1681229 244 32.8 5.0 6.8 chr6 118092994 118093212 (53021855) + MamGypLTR1b LTR/Gypsy 105 319 (463) 1681705 348 28.4 2.8 1.4 chr6 118102673 118102815 (53012252) + MamGypLTR1c LTR/Gypsy 649 793 (10) 1681717 232 30.6 5.8 5.2 chr6 118103829 118103983 (53011084) + LTR81C LTR/Gypsy 263 418 (735) 1681721 243 26.7 8.9 10.8 chr6 118104867 118105080 (53009987) + MamGypLTR2c LTR/Gypsy 831 1040 (28) 1681723 289 38.7 2.5 0.0 chr6 118400726 118400844 (52714223) C MamGypLTR2c LTR/Gypsy (512) 556 435 1682088 370 30.7 9.7 1.2 chr6 118400944 118401287 (52713780) C LTR81AB LTR/Gypsy (841) 509 132 1682089 455 30.4 5.0 3.5 chr6 118458746 118458951 (52656116) C MamGypLTR1b LTR/Gypsy (233) 549 331 1682157 1404 29.4 11.1 6.4 chr6 118505882 118506650 (52608417) C MamGypLTR1d LTR/Gypsy (7) 806 2 1682212 710 27.5 4.3 6.0 chr6 118566269 118566570 (52548497) C LTR81A LTR/Gypsy (8) 1342 1046 1682296 624 21.8 9.2 2.8 chr6 118567320 118567536 (52547531) C LTR81A LTR/Gypsy (6) 272 42 1682296 254 25.3 19.4 2.1 chr6 119066185 119066277 (52048790) + LTR81C LTR/Gypsy 268 376 (1017) 1682999 293 30.2 14.9 1.4 chr6 119066992 119067199 (52047868) + LTR81C LTR/Gypsy 871 1106 (47) 1682999 255 19.7 11.7 1.3 chr6 119818118 119818194 (51296873) C MamGypLTR1c LTR/Gypsy (9) 794 710 1684024 267 23.1 0.0 4.9 chr6 119847205 119847286 (51267781) + MamGypLTR2c LTR/Gypsy 991 1068 (0) 1684062 401 30.1 4.6 7.8 chr6 119850193 119850484 (51264583) C MamGypLTR1c LTR/Gypsy (39) 774 530 1684065 388 28.7 4.9 2.2 chr6 119850614 119850755 (51264312) C MamGypLTR1c LTR/Gypsy (353) 460 315 1684065 257 36.6 2.6 1.9 chr6 119851988 119852119 (51262948) C MamGypLTR1c LTR/Gypsy (617) 196 64 1684065 257 36.6 2.6 1.9 chr6 119852472 119852494 (51262573) C MamGypLTR1c LTR/Gypsy (750) 63 41 1684065 430 37.0 4.6 2.3 chr6 119883083 119883384 (51231683) + MamGypLTR2c LTR/Gypsy 156 464 (604) 1684102 332 24.3 2.8 4.6 chr6 119883667 119883774 (51231293) + MamGypLTR2c LTR/Gypsy 883 988 (80) 1684103 398 25.8 6.9 5.6 chr6 119940408 119940567 (51174500) + MamGypLTR1c LTR/Gypsy 642 803 (0) 1684169 388 24.4 3.5 0.0 chr6 119940806 119940891 (51174176) + MamGyp-int LTR/Gypsy 355 443 (4619) 1684170 297 30.7 19.9 3.2 chr6 120765794 120766039 (50349028) + LTR81B LTR/Gypsy 990 1276 (117) 1685170 308 34.3 9.0 1.1 chr6 121713055 121713231 (49401836) + LTR81B LTR/Gypsy 282 472 (921) 1686283 317 22.4 13.9 1.7 chr6 121895774 121895895 (49219172) + LTR81A LTR/Gypsy 20 156 (1194) 1686623 276 21.9 0.0 11.9 chr6 122161418 122161526 (48953541) + LTR81C LTR/Gypsy 1017 1112 (41) 1687028 332 28.6 11.5 9.6 chr6 122173610 122173818 (48941249) C MamGypLTR3 LTR/Gypsy (148) 691 479 1687052 583 32.4 9.7 4.5 chr6 122623859 122624281 (48490786) + MamGypLTR1c LTR/Gypsy 309 753 (50) 1687639 309 34.6 5.7 3.8 chr6 122714281 122714327 (48400740) C MamGyp-int LTR/Gypsy (2760) 2302 2257 1687764 309 34.6 5.7 3.8 chr6 122714622 122714732 (48400335) C MamGyp-int LTR/Gypsy (2806) 2256 2141 1687764 823 35.0 8.9 3.3 chr6 122715507 122715549 (48399518) C MamGyp-int LTR/Gypsy (3956) 1106 1069 1687764 823 35.0 8.9 3.3 chr6 122715664 122716044 (48399023) C MamGyp-int LTR/Gypsy (3994) 1068 658 1687764 588 35.6 10.2 3.1 chr6 123017384 123017766 (48097301) + MamGypLTR2c LTR/Gypsy 96 505 (563) 1688161 272 34.3 2.8 1.4 chr6 123078650 123078862 (48036205) + MamGypLTR2b LTR/Gypsy 705 920 (2) 1688244 580 21.8 3.7 0.1 chr6 123372341 123372484 (47742583) C MamGypLTR1a LTR/Gypsy (3) 781 627 1688644 243 37.3 1.6 2.5 chr6 123372533 123372653 (47742414) C MamGypLTR1a LTR/Gypsy (229) 553 434 1688644 344 33.6 6.6 3.9 chr6 123372788 123373044 (47742023) C MamGypLTR1a LTR/Gypsy (520) 264 1 1688644 499 29.6 6.0 3.2 chr6 124221747 124221997 (46893070) C LTR81B LTR/Gypsy (1063) 330 73 1689763 512 22.8 8.0 0.7 chr6 124421974 124422110 (46692957) C MamGypLTR1b LTR/Gypsy (635) 147 1 1690030 700 36.6 8.2 5.7 chr6 124462519 124463500 (46651567) C MamGypLTR2c LTR/Gypsy (0) 1068 62 1690075 509 26.8 13.0 1.1 chr6 124579867 124580051 (46535016) C MamGypLTR1c LTR/Gypsy (0) 803 597 1690210 261 31.7 3.7 0.0 chr6 124580236 124580317 (46534750) C MamGypLTR1c LTR/Gypsy (254) 559 475 1690210 353 31.8 1.7 8.2 chr6 124690019 124690251 (46424816) C LTR81A LTR/Gypsy (1115) 235 18 1690346 404 31.5 5.3 4.1 chr6 124798344 124798670 (46316397) C MamGypLTR1d LTR/Gypsy (7) 806 427 1690498 380 33.3 5.8 1.6 chr6 124798946 124799233 (46315834) C MamGypLTR1d LTR/Gypsy (452) 351 51 1690498 270 27.8 3.1 1.0 chr6 124875709 124875806 (46239261) C LTR81A LTR/Gypsy (15) 1138 1039 1690598 514 29.1 7.8 8.5 chr6 124876479 124876865 (46238202) C LTR81A LTR/Gypsy (923) 427 44 1690598 344 27.4 0.9 0.0 chr6 125518523 125518628 (45596439) C MamGypLTR1c LTR/Gypsy (3) 800 694 1691439 338 29.0 12.9 1.9 chr6 125535655 125535918 (45579149) C LTR81B LTR/Gypsy (1100) 293 7 1691460 260 17.9 4.5 15.1 chr6 126049433 126049540 (45065527) C MamGypLTR1d LTR/Gypsy (8) 805 678 1692132 355 28.0 4.1 2.5 chr6 126050475 126050595 (45064472) C MamGypLTR1c LTR/Gypsy (678) 125 3 1692134 252 32.7 5.7 6.7 chr6 126478119 126478555 (44636512) C MamGypLTR2c LTR/Gypsy (704) 646 2 1692723 295 36.7 3.4 5.6 chr6 126505880 126506058 (44609009) + MamGypLTR1d LTR/Gypsy 329 503 (310) 1692751 299 36.8 10.7 1.9 chr6 127221865 127222125 (43892942) C LTR81C LTR/Gypsy (401) 949 468 1693548 379 23.0 16.9 4.2 chr6 127429196 127429462 (43685605) C LTR81A LTR/Gypsy (893) 457 153 1693840 370 27.8 8.4 3.0 chr6 128185101 128185267 (42929800) + LTR81AB LTR/Gypsy 65 240 (38) 1694776 252 30.2 3.3 4.4 chr6 128242090 128242179 (42872888) C MamGypLTR3 LTR/Gypsy (214) 625 537 1694860 353 25.2 4.1 2.7 chr6 129239819 129239965 (41875102) C MamGypLTR2b LTR/Gypsy (37) 885 737 1696168 371 29.4 2.8 7.9 chr6 129603448 129603661 (41511406) C MamGypLTR1c LTR/Gypsy (0) 803 601 1696629 312 23.4 8.0 0.9 chr6 130288879 130288990 (40826077) + MamGypLTR1a LTR/Gypsy 3 122 (662) 1697604 373 37.2 8.7 0.8 chr6 130289185 130289539 (40825528) + MamGypLTR1a LTR/Gypsy 390 772 (12) 1697605 1220 30.8 11.2 5.5 chr6 130549977 130550688 (40564379) + MamGypLTR1d LTR/Gypsy 56 808 (5) 1698001 827 31.9 6.8 3.1 chr6 130654959 130655440 (40459627) C MamGypLTR1a LTR/Gypsy (284) 500 1 1698164 290 28.7 1.1 0.0 chr6 130829163 130829249 (40285818) C MamGypLTR1d LTR/Gypsy (31) 782 695 1698366 248 26.1 9.6 2.1 chr6 130845467 130845560 (40269507) C MamGypLTR1c LTR/Gypsy (606) 197 97 1698398 402 29.7 6.7 2.8 chr6 130987247 130987426 (40127641) C LTR81B LTR/Gypsy (1101) 292 106 1698584 339 34.5 6.0 5.4 chr6 131043410 131043761 (40071306) + MamGypLTR1a LTR/Gypsy 108 461 (323) 1698652 257 18.1 24.4 3.0 chr6 131043873 131044003 (40071064) + MamGypLTR1a LTR/Gypsy 617 796 (7) 1698652 307 18.9 12.2 0.0 chr6 131076467 131076540 (40038527) C MamGypLTR1c LTR/Gypsy (27) 786 704 1698706 607 35.4 8.0 2.7 chr6 131076600 131077124 (40037943) C MamGypLTR1c LTR/Gypsy (250) 553 1 1698706 417 23.9 7.6 1.9 chr6 131487068 131487225 (39627842) C MamGypLTR1c LTR/Gypsy (624) 179 13 1699298 373 25.4 3.3 5.0 chr6 131709135 131709254 (39405813) C MamGypLTR2c LTR/Gypsy (949) 119 2 1699591 235 26.4 6.9 0.0 chr6 131729829 131729900 (39385167) C LTR81C LTR/Gypsy (218) 1132 1056 1699616 299 32.0 9.1 3.9 chr6 131730360 131730567 (39384500) C LTR81C LTR/Gypsy (881) 308 88 1699616 367 32.6 7.7 6.2 chr6 131770626 131771041 (39344026) C MamGypLTR1b LTR/Gypsy (37) 745 324 1699678 278 25.5 3.6 0.9 chr6 131868521 131868631 (39246436) + MamGypLTR2c LTR/Gypsy 21 134 (934) 1699813 755 32.3 10.2 3.8 chr6 131882663 131883377 (39231690) C MamGypLTR1c LTR/Gypsy (30) 773 13 1699841 278 30.1 10.2 5.4 chr6 131895734 131895919 (39219148) + MamGypLTR2c LTR/Gypsy 70 264 (804) 1699862 479 28.9 5.8 8.7 chr6 132117548 132117960 (38997107) + LTR81A LTR/Gypsy 16 416 (934) 1700247 571 32.2 3.3 3.3 chr6 132244528 132244771 (38870296) C MamGypLTR3 LTR/Gypsy (90) 749 506 1700434 300 28.0 13.9 4.3 chr6 132622098 132622306 (38492761) + MamGypLTR2c LTR/Gypsy 821 1049 (19) 1700964 325 30.9 6.6 1.2 chr6 132883876 132884042 (38231025) + MamGypLTR1d LTR/Gypsy 632 807 (6) 1701283 233 26.9 7.7 0.0 chr6 133933794 133933871 (37181196) C MamGypLTR1c LTR/Gypsy (297) 487 404 1702746 265 28.5 17.9 2.1 chr6 133933992 133934131 (37180936) C MamGypLTR1c LTR/Gypsy (580) 223 62 1702746 293 26.7 3.5 10.0 chr6 134391579 134391778 (36723289) + MamGypLTR1b LTR/Gypsy 57 243 (539) 1703397 885 27.0 12.3 3.2 chr6 134392703 134393107 (36721960) + MamGypLTR1b LTR/Gypsy 341 782 (0) 1703397 380 35.0 5.3 2.1 chr6 134394496 134394685 (36720382) + MamGyp-int LTR/Gypsy 1094 1289 (3773) 1703401 469 22.0 5.8 11.5 chr6 134395521 134395746 (36719321) + MamGypLTR1b LTR/Gypsy 21 233 (549) 1703402 225 16.2 0.0 0.0 chr6 134432427 134432463 (36682604) C MamGypLTR3 LTR/Gypsy (258) 581 545 1703468 250 29.7 7.7 11.2 chr6 134836392 134836846 (36278221) + MamGypLTR1d LTR/Gypsy 356 794 (19) 1704279 262 32.1 4.3 3.5 chr6 135067734 135067849 (36047218) + MamGypLTR1b LTR/Gypsy 666 782 (0) 1704623 414 26.6 10.3 4.2 chr6 135093093 135093347 (36021720) + LTR81A LTR/Gypsy 990 1327 (23) 1704663 259 29.1 7.1 2.6 chr6 135275268 135275380 (35839687) + MamGyp-int LTR/Gypsy 3324 3441 (1621) 1704960 282 35.0 4.9 9.4 chr6 135386146 135386369 (35728698) C MamGypLTR2c LTR/Gypsy (514) 554 341 1705130 228 29.2 1.0 12.8 chr6 135867400 135867501 (35247566) + MamGypLTR1c LTR/Gypsy 56 145 (658) 1705868 268 25.2 6.4 2.7 chr6 135881172 135881281 (35233786) + MamGypLTR1b LTR/Gypsy 628 741 (41) 1705890 228 25.8 8.5 4.7 chr6 136132027 136132132 (34982935) C MamGypLTR1c LTR/Gypsy (0) 803 694 1706226 341 24.0 27.0 0.0 chr6 136367444 136367639 (34747428) C LTR81A LTR/Gypsy (29) 1124 876 1706530 585 30.0 6.7 8.7 chr6 136367649 136368199 (34746868) C LTR81A LTR/Gypsy (810) 540 1 1706530 227 31.3 0.0 0.0 chr6 137066955 137067021 (34048046) C MamGypLTR2b LTR/Gypsy (104) 818 752 1707587 233 30.8 5.2 5.2 chr6 137602999 137603190 (33511877) + MamGypLTR2b LTR/Gypsy 114 305 (617) 1708460 576 28.1 13.4 1.7 chr6 137655944 137656233 (33458834) C LTR81B LTR/Gypsy (16) 1377 1054 1708544 353 29.4 8.6 3.8 chr6 137719843 137720051 (33395016) C MamGypLTR1d LTR/Gypsy (0) 813 595 1708621 638 31.0 8.7 9.6 chr6 138080509 138080994 (33034073) + MamGypLTR2c LTR/Gypsy 429 922 (146) 1709121 638 31.0 8.7 9.6 chr6 138081327 138081485 (33033582) + MamGypLTR2c LTR/Gypsy 923 1068 (0) 1709121 301 30.2 7.1 5.9 chr6 138093595 138093763 (33021304) + LTR81C LTR/Gypsy 82 252 (901) 1709142 390 33.1 0.7 0.0 chr6 138093854 138094001 (33021066) + LTR81C LTR/Gypsy 425 573 (580) 1709142 425 31.5 8.7 6.5 chr6 138094097 138094306 (33020761) + LTR81C LTR/Gypsy 806 1032 (121) 1709142 425 31.5 8.7 6.5 chr6 138094666 138094732 (33020335) + LTR81C LTR/Gypsy 1033 1093 (60) 1709142 425 31.5 8.7 6.5 chr6 138094863 138094892 (33020175) + LTR81C LTR/Gypsy 1094 1121 (32) 1709142 309 24.1 9.7 4.2 chr6 138100498 138100662 (33014405) C MamGypLTR2b LTR/Gypsy (33) 889 716 1709156 409 25.2 8.9 7.1 chr6 138115632 138115992 (32999075) + LTR81B LTR/Gypsy 102 478 (872) 1709179 236 28.0 4.8 3.9 chr6 138121036 138121139 (32993928) + LTR81B LTR/Gypsy 1289 1393 (0) 1709190 304 26.8 7.5 8.6 chr6 138130333 138130749 (32984318) + MamGypLTR2c LTR/Gypsy 870 1350 (0) 1709205 271 25.5 2.7 3.6 chr6 138390486 138390595 (32724472) C LTR81C LTR/Gypsy (109) 1044 936 1709582 312 31.2 9.3 3.6 chr6 138590336 138590614 (32524453) C MamGypLTR1b LTR/Gypsy (484) 298 4 1709861 533 27.9 3.2 1.6 chr6 138669490 138669678 (32445389) + MamGypLTR1c LTR/Gypsy 3 194 (609) 1709980 274 24.4 7.6 3.4 chr6 138669688 138669806 (32445261) + MamGypLTR1c LTR/Gypsy 687 810 (3) 1709980 613 27.6 3.6 5.0 chr6 138862681 138862952 (32252115) + LTR81B LTR/Gypsy 880 1392 (1) 1710246 360 27.3 3.0 7.6 chr6 139324972 139325169 (31789898) C LTR81C LTR/Gypsy (134) 1019 831 1711029 313 29.7 2.6 3.3 chr6 139657499 139657651 (31457416) C MamGypLTR2b LTR/Gypsy (58) 864 713 1711578 655 33.8 3.8 9.0 chr6 140028993 140029545 (31085522) C MamGypLTR1a LTR/Gypsy (243) 541 18 1712164 228 29.7 3.5 12.9 chr6 140353780 140353917 (30761150) + LTR81B LTR/Gypsy 1212 1338 (55) 1712625 228 29.7 3.5 12.9 chr6 140354229 140354290 (30760777) + LTR81B LTR/Gypsy 1339 1393 (0) 1712625 267 14.0 5.6 7.4 chr6 140921990 140922043 (30193024) + LTR81AB LTR/Gypsy 115 167 (111) 1713301 340 35.7 6.7 6.5 chr6 141260091 141260431 (29854636) + MamGypLTR1b LTR/Gypsy 130 471 (311) 1713728 256 28.1 0.0 6.8 chr6 141260580 141260646 (29854421) + MamGypLTR1b LTR/Gypsy 664 726 (56) 1713728 256 28.1 0.0 6.8 chr6 141260939 141260973 (29854094) + MamGypLTR1b LTR/Gypsy 727 759 (23) 1713728 341 36.5 10.7 3.1 chr6 142567572 142568029 (28547038) C LTR81A LTR/Gypsy (188) 1162 670 1715343 270 24.7 1.2 4.7 chr6 142568806 142568890 (28546177) C LTR81A LTR/Gypsy (1136) 214 133 1715345 253 35.9 5.3 2.1 chr6 142935254 142935441 (28179626) C LTR81C LTR/Gypsy (393) 760 567 1715829 332 36.0 0.7 3.3 chr6 142999436 142999711 (28115356) C MamGypLTR1b LTR/Gypsy (0) 782 514 1715919 254 25.0 11.4 0.9 chr6 143084195 143084299 (28030768) + MamGypLTR1b LTR/Gypsy 6 121 (661) 1716045 524 32.8 7.5 2.1 chr6 143084465 143084704 (28030363) + MamGypLTR1b LTR/Gypsy 490 742 (40) 1716045 359 29.1 20.3 2.1 chr6 143523647 143523927 (27591140) + MamGypLTR2c LTR/Gypsy 43 374 (694) 1716618 379 21.0 13.6 1.9 chr6 143837376 143837513 (27277554) + LTR81B LTR/Gypsy 1106 1241 (152) 1717081 299 24.4 10.7 7.9 chr6 143912212 143912389 (27202678) + MamGypLTR1c LTR/Gypsy 9 191 (612) 1717212 226 32.1 11.2 2.4 chr6 144285011 144285179 (26829888) + MamGypLTR1d LTR/Gypsy 52 235 (549) 1717723 246 28.7 8.4 3.6 chr6 144285484 144285659 (26829408) + MamGypLTR1d LTR/Gypsy 595 808 (5) 1717723 264 27.4 12.3 3.8 chr6 145215581 145215746 (25899321) C LTR81B LTR/Gypsy (206) 1187 1042 1719135 250 28.9 11.1 5.2 chr6 145292241 145292375 (25822692) C MamGypLTR1a LTR/Gypsy (0) 784 642 1719236 254 32.5 0.0 6.8 chr6 145779403 145779534 (25335533) C MamGypLTR3 LTR/Gypsy (367) 472 350 1719897 430 29.2 22.4 0.7 chr6 145883624 145883912 (25231155) C MamGypLTR1b LTR/Gypsy (1) 781 430 1720024 422 29.8 0.0 0.8 chr6 146004597 146004721 (25110346) + MamGypLTR1a LTR/Gypsy 657 780 (4) 1720161 271 32.0 15.2 7.8 chr6 146401435 146401729 (24713338) + MamGypLTR1d LTR/Gypsy 61 377 (436) 1720645 444 24.7 6.6 7.2 chr6 146979278 146979443 (24135624) + LTR81A LTR/Gypsy 112 276 (1074) 1721382 258 30.8 9.2 1.6 chr6 146979764 146979948 (24135119) C LTR81 LTR/Gypsy (16) 1173 975 1721383 345 27.3 6.5 12.2 chr6 147187832 147188110 (23926957) C MamGypLTR3 LTR/Gypsy (37) 802 540 1721672 285 29.0 1.0 0.0 chr6 147189260 147189359 (23925708) C MamGypLTR2b LTR/Gypsy (88) 834 734 1721675 271 22.3 13.4 3.1 chr6 147320612 147320708 (23794359) + LTR81B LTR/Gypsy 38 144 (1249) 1721839 275 23.1 6.6 4.1 chr6 147407061 147407182 (23707885) + MamGypLTR2c LTR/Gypsy 37 161 (907) 1721956 486 34.0 10.9 4.1 chr6 147410675 147411040 (23704027) + MamGypLTR2c LTR/Gypsy 21 411 (657) 1721959 380 33.7 5.3 8.1 chr6 147412130 147412452 (23702615) + MamGypLTR2c LTR/Gypsy 609 922 (0) 1721959 340 20.0 11.2 5.6 chr6 147511536 147511678 (23603389) + MamGypLTR2b LTR/Gypsy 698 848 (74) 1722119 326 29.1 6.5 6.7 chr6 148046931 148047232 (23067835) + LTR81B LTR/Gypsy 886 1393 (0) 1722854 458 28.2 5.0 12.5 chr6 148272077 148272306 (22842761) C LTR81A LTR/Gypsy (995) 355 135 1723174 458 28.2 5.0 12.5 chr6 148272582 148272711 (22842356) C LTR81A LTR/Gypsy (1216) 134 22 1723174 249 25.3 2.6 1.3 chr6 148310912 148310987 (22804080) C MamGypLTR1c LTR/Gypsy (699) 104 28 1723227 238 31.7 11.4 4.3 chr6 148430778 148431057 (22684010) C LTR81B LTR/Gypsy (60) 1333 1034 1723369 405 31.6 11.5 4.1 chr6 148511114 148511607 (22603460) C MamGypLTR1c LTR/Gypsy (124) 658 126 1723484 339 30.6 8.5 4.6 chr6 149014102 149014382 (22100685) C MamGypLTR1b LTR/Gypsy (476) 306 15 1724286 333 32.3 7.6 9.0 chr6 149016991 149017344 (22097723) C MamGypLTR2c LTR/Gypsy (52) 1016 668 1724289 426 27.1 12.9 3.4 chr6 149033169 149033401 (22081666) C MamGypLTR2b LTR/Gypsy (4) 918 664 1724312 325 30.5 6.9 2.7 chr6 149041846 149042057 (22073010) C LTR81B LTR/Gypsy (37) 1356 1230 1724326 655 31.5 8.9 2.5 chr6 149232317 149232710 (21882357) C MamGypLTR2c LTR/Gypsy (596) 472 54 1724618 561 28.4 3.0 6.9 chr6 149500165 149500395 (21614672) + MamGypLTR3 LTR/Gypsy 598 819 (20) 1724994 588 24.8 5.4 9.0 chr6 149595568 149595789 (21519278) + MamGypLTR1a LTR/Gypsy 19 232 (552) 1725134 396 31.4 10.2 5.1 chr6 149595945 149596179 (21518888) + MamGypLTR1a LTR/Gypsy 458 704 (80) 1725134 253 31.2 15.0 2.3 chr6 149786910 149787129 (21327938) + LTR81 LTR/Gypsy 169 416 (773) 1725446 228 26.8 0.0 0.0 chr6 149787308 149787363 (21327704) + LTR81 LTR/Gypsy 971 1026 (367) 1725446 355 27.6 10.1 8.6 chr6 151826414 151826538 (19288529) C MamGypLTR2c LTR/Gypsy (845) 223 85 1728954 355 27.6 10.1 8.6 chr6 151826830 151826901 (19288166) C MamGypLTR2c LTR/Gypsy (984) 84 23 1728954 242 23.6 3.5 6.6 chr6 153023501 153023634 (18091433) C LTR81B LTR/Gypsy (1133) 217 88 1730680 248 31.4 13.8 0.5 chr6 153084832 153085026 (18030041) + MamGypLTR2b LTR/Gypsy 675 895 (27) 1730765 321 32.1 1.1 3.5 chr6 153550220 153550327 (17564740) + LTR81C LTR/Gypsy 9 111 (1042) 1731433 321 32.1 1.1 3.5 chr6 153550367 153550431 (17564636) + LTR81C LTR/Gypsy 112 177 (976) 1731433 241 30.8 0.9 7.1 chr6 154399667 154399723 (16715344) + MamGypLTR2c LTR/Gypsy 10 61 (1007) 1732525 241 30.8 0.9 7.1 chr6 154400030 154400083 (16714984) + MamGypLTR2c LTR/Gypsy 62 114 (954) 1732525 276 29.2 11.4 6.2 chr6 154872218 154872464 (16242603) C LTR81B LTR/Gypsy (0) 1393 1131 1733329 276 29.2 11.4 6.2 chr6 154872776 154872816 (16242251) C LTR81B LTR/Gypsy (263) 1130 1091 1733329 258 30.8 0.9 7.8 chr6 154873867 154873982 (16241085) C LTR81B LTR/Gypsy (1058) 335 228 1733329 228 27.1 22.7 0.8 chr6 155299114 155299232 (15815835) + MamGypLTR2c LTR/Gypsy 261 405 (663) 1734091 282 28.4 2.2 5.9 chr6 155300693 155300763 (15814304) + MamGypLTR2c LTR/Gypsy 829 893 (175) 1734091 282 28.4 2.2 5.9 chr6 155300980 155301042 (15814025) + MamGypLTR2c LTR/Gypsy 894 957 (111) 1734091 342 23.5 0.0 0.0 chr6 155301346 155301413 (15813654) + MamGypLTR2c LTR/Gypsy 961 1028 (40) 1734091 264 24.2 4.8 0.0 chr6 155302104 155302165 (15812902) + MamGypLTR2c LTR/Gypsy 964 1028 (40) 1734100 350 23.0 18.0 4.1 chr6 156027062 156027233 (15087834) + LTR81B LTR/Gypsy 1 196 (1197) 1735165 361 28.9 11.7 1.7 chr6 156382061 156382299 (14732768) + LTR81C LTR/Gypsy 848 1110 (43) 1735612 319 30.5 4.7 0.8 chr6 156688714 156688842 (14426225) + LTR81C LTR/Gypsy 122 255 (934) 1735992 383 34.8 3.8 3.8 chr6 156689441 156689625 (14425442) + LTR81C LTR/Gypsy 836 1020 (133) 1735992 320 26.2 14.2 5.5 chr6 156916796 156917049 (14198018) + LTR81B LTR/Gypsy 13 288 (1105) 1736325 601 24.8 6.0 1.5 chr6 157618943 157619143 (13495924) + MamGypLTR2b LTR/Gypsy 713 922 (0) 1737212 273 25.0 6.3 8.6 chr6 159336770 159336944 (11778123) + MamGypLTR1b LTR/Gypsy 561 731 (51) 1739855 651 31.5 4.5 2.6 chr6 159563143 159563502 (11551565) + MamGypLTR1c LTR/Gypsy 415 803 (0) 1740195 318 27.0 11.0 8.8 chr6 159697456 159697820 (11417247) + MamGypLTR1b LTR/Gypsy 45 417 (365) 1740358 250 30.1 2.1 1.1 chr6 159727854 159727947 (11387120) + MamGypLTR1c LTR/Gypsy 53 147 (656) 1740395 468 34.3 12.7 2.5 chr6 159768439 159768872 (11346195) C MamGypLTR2c LTR/Gypsy (588) 480 3 1740433 247 25.4 4.2 0.0 chr6 159944456 159944526 (11170541) + LTR81A LTR/Gypsy 3 76 (1274) 1740630 360 26.6 4.3 0.0 chr6 160037461 160037554 (11077513) C MamGypLTR1a LTR/Gypsy (22) 762 665 1740764 363 22.9 8.9 0.8 chr6 160254885 160255007 (10860060) C MamGypLTR2b LTR/Gypsy (10) 912 780 1741115 282 28.1 8.2 4.1 chr6 160257447 160257617 (10857450) + MamGypLTR2c LTR/Gypsy 19 196 (872) 1741121 263 30.5 25.2 1.1 chr6 160258307 160258588 (10856479) + MamGypLTR2c LTR/Gypsy 704 1053 (15) 1741121 241 31.7 3.1 3.9 chr6 160288301 160288428 (10826639) + MamGypLTR2c LTR/Gypsy 908 1034 (34) 1741178 832 34.2 13.4 3.0 chr6 160295044 160295853 (10819214) + MamGyp-int LTR/Gypsy 3998 4897 (165) 1741188 832 36.2 5.8 2.1 chr6 160296231 160296310 (10818757) + MamGyp-int LTR/Gypsy 4898 4975 (87) 1741188 326 23.8 4.8 2.9 chr6 160361088 160361191 (10753876) C MamGypLTR1d LTR/Gypsy (2) 811 706 1741288 700 24.4 10.1 2.7 chr6 160368902 160369120 (10745947) C MamGypLTR2c LTR/Gypsy (24) 1044 810 1741298 296 30.8 1.6 2.4 chr6 160372683 160372805 (10742262) C MamGypLTR2c LTR/Gypsy (584) 484 363 1741307 252 32.9 9.0 0.0 chr6 160372854 160373008 (10742059) C MamGypLTR2c LTR/Gypsy (795) 273 105 1741307 266 28.4 0.0 1.3 chr6 160589090 160589164 (10525903) + MamGypLTR2c LTR/Gypsy 907 980 (88) 1741558 231 20.8 5.3 10.6 chr6 161720818 161720930 (9394137) C MamGypLTR2c LTR/Gypsy (892) 176 70 1742857 245 26.8 4.1 1.0 chr6 162042910 162043007 (9072060) C LTR81B LTR/Gypsy (9) 1384 1284 1743345 232 31.1 2.8 0.9 chr6 162075376 162075482 (9039585) + LTR81C LTR/Gypsy 66 174 (979) 1743371 226 22.5 17.0 4.4 chr6 162076696 162076830 (9038237) + LTR81B LTR/Gypsy 1182 1333 (60) 1743372 501 16.1 15.8 1.7 chr6 162103332 162103451 (9011616) + MamGypLTR1b LTR/Gypsy 624 760 (22) 1743413 276 25.3 2.3 0.0 chr6 162478154 162478240 (8636827) + LTR81B LTR/Gypsy 1269 1357 (36) 1743973 264 31.4 7.8 2.8 chr6 162714192 162714371 (8400696) + MamGypLTR2c LTR/Gypsy 720 908 (160) 1744304 299 27.3 5.7 8.0 chr6 163309804 163309978 (7805089) C MamGypLTR1c LTR/Gypsy (622) 181 11 1745140 234 32.5 3.1 6.2 chr6 164055848 164056012 (7059055) C MamGypLTR1c LTR/Gypsy (351) 462 307 1746064 239 37.3 1.5 3.8 chr6 164740313 164740443 (6374624) C MamGypLTR2c LTR/Gypsy (854) 214 87 1746924 253 33.7 4.7 5.9 chr6 165657597 165657851 (5457216) C MamGypLTR3 LTR/Gypsy (453) 386 135 1748009 422 25.7 7.1 3.5 chr6 165686977 165687117 (5427950) + MamGypLTR1b LTR/Gypsy 598 743 (39) 1748054 312 27.4 5.1 12.0 chr6 165736745 165737018 (5378049) C MamGypLTR2b LTR/Gypsy (0) 922 668 1748116 466 22.8 4.7 0.8 chr6 165859915 165860042 (5255025) C MamGypLTR1a LTR/Gypsy (649) 135 3 1748252 260 35.2 8.7 7.3 chr6 166346398 166346697 (4768370) + MamGypLTR2b LTR/Gypsy 14 317 (605) 1748838 262 25.3 4.9 2.5 chr6 166361700 166361780 (4753287) + LTR81A LTR/Gypsy 282 364 (986) 1748866 272 25.6 5.1 0.0 chr6 167286044 167286121 (3828946) + MamGypLTR1b LTR/Gypsy 697 778 (4) 1749936 340 23.1 13.2 0.0 chr6 168639641 168639761 (2475306) + LTR81A LTR/Gypsy 12 148 (1202) 1751390 279 31.1 0.0 0.0 chr6 168681982 168682055 (2433012) C LTR81A LTR/Gypsy (1112) 238 165 1751434 256 23.3 9.1 0.0 chr6 169327561 169327650 (1787417) C MamGypLTR1c LTR/Gypsy (571) 242 141 1752073 229 31.8 1.1 5.6 chr6 169946684 169946773 (1168294) C MamGypLTR2b LTR/Gypsy (688) 234 149 1752682 236 27.9 9.7 1.8 chr7 2490141 2490253 (156648410) C LTR81B LTR/Gypsy (4) 1389 1268 1757288 249 25.8 2.9 4.9 chr7 2906045 2906146 (156232517) C MamGypLTR2c LTR/Gypsy (55) 1013 914 1757998 396 28.4 12.8 5.1 chr7 3093648 3093904 (156044759) C LTR81B LTR/Gypsy (78) 1315 829 1758398 261 29.7 0.0 0.0 chr7 3578278 3578351 (155560312) C MamGypLTR1a LTR/Gypsy (264) 520 447 1759253 269 34.3 9.9 6.0 chr7 4370000 4370331 (154768332) + MamGypLTR1a LTR/Gypsy 172 516 (268) 1760359 468 33.2 1.0 4.8 chr7 4370579 4370784 (154767879) + MamGypLTR1a LTR/Gypsy 561 758 (26) 1760359 404 21.5 5.6 3.2 chr7 4485807 4485931 (154652732) C MamGypLTR1b LTR/Gypsy (36) 746 619 1760587 482 30.0 4.2 8.5 chr7 5051689 5051994 (154086669) C MamGypLTR1a LTR/Gypsy (440) 344 52 1761783 258 27.6 5.7 7.6 chr7 5906128 5906284 (153232379) + MamGypLTR1a LTR/Gypsy 628 781 (3) 1763692 240 20.8 11.5 1.3 chr7 5934427 5934504 (153204159) C MamGypLTR2b LTR/Gypsy (37) 885 800 1763768 389 30.8 0.0 3.3 chr7 5934792 5934912 (153203751) C MamGypLTR2b LTR/Gypsy (645) 277 161 1763769 468 28.9 9.5 3.3 chr7 6274343 6274553 (152864110) + MamGypLTR3 LTR/Gypsy 614 837 (2) 1764513 263 29.4 8.0 3.5 chr7 6607706 6607818 (152530845) + MamGypLTR2c LTR/Gypsy 88 205 (863) 1765339 384 32.8 0.0 3.1 chr7 6869310 6869438 (152269225) + MamGypLTR2b LTR/Gypsy 153 277 (645) 1765880 275 20.2 10.6 1.2 chr7 6869719 6869803 (152268860) + MamGypLTR2b LTR/Gypsy 793 885 (37) 1765881 530 32.9 5.6 2.8 chr7 7310471 7310758 (151827905) + LTR81B LTR/Gypsy 175 470 (923) 1766473 244 28.3 12.6 4.9 chr7 7311539 7311761 (151826902) + LTR81B LTR/Gypsy 1090 1329 (64) 1766473 360 36.0 13.1 4.4 chr7 7354547 7355226 (151783437) + MamGypLTR1c LTR/Gypsy 55 793 (10) 1766516 562 31.4 2.8 7.1 chr7 8144909 8145162 (150993501) + MamGyp-int LTR/Gypsy 711 953 (4109) 1767650 675 23.4 7.0 5.4 chr7 8240701 8240958 (150897705) + LTR81A LTR/Gypsy 4 265 (1128) 1767788 269 25.6 6.7 0.0 chr7 8798911 8799000 (150339663) + MamGypLTR2b LTR/Gypsy 805 900 (22) 1768474 487 38.6 3.2 2.6 chr7 8932062 8932407 (150206256) C MamGypLTR3 LTR/Gypsy (228) 611 264 1768626 395 38.1 10.0 3.2 chr7 10247534 10248004 (148890659) + MamGypLTR1c LTR/Gypsy 297 799 (4) 1770318 435 33.6 12.3 2.2 chr7 10470046 10470322 (148668341) + MamGypLTR1b LTR/Gypsy 278 582 (200) 1770547 227 17.5 7.8 1.6 chr7 10635446 10635509 (148503154) C LTR81 LTR/Gypsy (6) 1183 1116 1770728 278 32.1 6.4 5.0 chr7 10930389 10930529 (148208134) + MamGypLTR3 LTR/Gypsy 393 535 (304) 1771093 308 37.0 6.5 5.7 chr7 11272146 11272374 (147866289) C MamGypLTR2b LTR/Gypsy (516) 406 176 1771609 226 18.6 0.0 0.0 chr7 11305554 11305596 (147833067) + LTR81B LTR/Gypsy 1133 1175 (218) 1771658 393 23.5 10.1 1.4 chr7 11328171 11328308 (147810355) C MamGypLTR2b LTR/Gypsy (25) 897 748 1771686 473 33.3 0.0 2.3 chr7 11348446 11348620 (147790043) + LTR81A LTR/Gypsy 54 224 (1126) 1771703 402 29.3 1.0 10.8 chr7 11489348 11489550 (147649113) + MamGypLTR3 LTR/Gypsy 618 800 (39) 1771860 391 25.2 3.4 2.5 chr7 12126714 12126831 (147011832) + MamGypLTR1a LTR/Gypsy 51 169 (615) 1772653 253 20.9 4.5 0.0 chr7 12436153 12436219 (146702444) + LTR81B LTR/Gypsy 131 200 (1193) 1773014 232 32.7 6.8 6.2 chr7 12627182 12627357 (146511306) C MamGypLTR2c LTR/Gypsy (498) 570 394 1773247 734 31.0 6.7 5.9 chr7 12815771 12816157 (146322506) C MamGypLTR1b LTR/Gypsy (19) 763 374 1773527 396 25.4 14.0 3.4 chr7 12878399 12878634 (146260029) C MamGypLTR1c LTR/Gypsy (533) 270 10 1773610 325 26.0 5.7 0.9 chr7 12909241 12909345 (146229318) C MamGypLTR2b LTR/Gypsy (25) 897 788 1773649 227 34.6 5.6 4.2 chr7 12909382 12909523 (146229140) C MamGypLTR2b LTR/Gypsy (279) 643 500 1773649 459 32.1 8.3 0.9 chr7 13079272 13079488 (146059175) + MamGypLTR1c LTR/Gypsy 571 803 (0) 1773872 259 31.5 6.3 6.7 chr7 13493250 13493504 (145645159) + LTR81B LTR/Gypsy 1019 1272 (121) 1774447 433 39.0 1.8 5.0 chr7 13600561 13600843 (145537820) + MamGypLTR2b LTR/Gypsy 11 284 (638) 1774579 571 33.7 9.1 7.0 chr7 14047159 14047435 (145091228) C MamGypLTR1b LTR/Gypsy (9) 773 497 1775160 571 31.5 18.3 5.8 chr7 14047778 14048187 (145090476) C MamGypLTR1b LTR/Gypsy (286) 496 29 1775160 251 15.6 0.0 0.0 chr7 14048221 14048265 (145090398) C MamGypLTR1b LTR/Gypsy (739) 45 1 1775160 234 25.2 17.0 2.8 chr7 14302749 14302854 (144835809) + LTR81A LTR/Gypsy 1230 1350 (0) 1775504 356 32.3 6.1 0.6 chr7 14446258 14446422 (144692241) + MamGypLTR3 LTR/Gypsy 647 820 (19) 1775668 237 27.2 6.3 3.2 chr7 14670639 14670733 (144467930) + MamGypLTR2c LTR/Gypsy 145 242 (826) 1775958 313 30.0 12.8 2.7 chr7 15090514 15090732 (144047931) C MamGypLTR1c LTR/Gypsy (552) 251 11 1776499 433 25.4 7.1 2.1 chr7 15181797 15181937 (143956726) C MamGypLTR1b LTR/Gypsy (18) 764 617 1776622 244 28.9 10.4 1.9 chr7 15182287 15182392 (143956271) C MamGypLTR1b LTR/Gypsy (626) 156 42 1776622 554 37.6 10.6 3.9 chr7 15199445 15200008 (143938655) C LTR81A LTR/Gypsy (478) 872 271 1776636 563 33.3 9.1 1.7 chr7 15927888 15928174 (143210489) C MamGypLTR1b LTR/Gypsy (117) 665 358 1777589 466 37.6 0.6 0.0 chr7 15972817 15972994 (143165669) C MamGypLTR1b LTR/Gypsy (262) 520 342 1777648 494 33.6 12.6 6.6 chr7 15992796 15993161 (143145502) + MamGypLTR1d LTR/Gypsy 62 449 (364) 1777668 255 21.7 1.4 2.8 chr7 15993780 15993850 (143144813) + MamGypLTR1d LTR/Gypsy 460 529 (255) 1777668 306 30.2 5.7 0.0 chr7 16026679 16026784 (143111879) C MamGypLTR1a LTR/Gypsy (37) 747 636 1777708 393 26.5 5.2 1.9 chr7 16027097 16027250 (143111413) C MamGypLTR1a LTR/Gypsy (625) 159 1 1777708 370 33.0 6.1 2.9 chr7 16119996 16120110 (143018553) + MamGypLTR1a LTR/Gypsy 4 125 (659) 1777821 370 33.0 6.1 2.9 chr7 16120467 16120596 (143018067) + MamGypLTR1a LTR/Gypsy 126 257 (527) 1777821 324 28.0 1.8 6.1 chr7 16517012 16517125 (142621538) + MamGypLTR1a LTR/Gypsy 481 589 (195) 1778266 423 22.7 2.7 1.8 chr7 16724923 16725034 (142413629) C LTR81A LTR/Gypsy (1097) 253 141 1778602 390 31.9 10.7 4.5 chr7 17010348 17010636 (142128027) C MamGypLTR3 LTR/Gypsy (38) 801 495 1779008 264 28.7 3.6 2.7 chr7 17010866 17010976 (142127687) C MamGypLTR3 LTR/Gypsy (649) 190 79 1779008 460 28.4 1.2 3.6 chr7 17298850 17299017 (141839646) C LTR81B LTR/Gypsy (0) 1393 1230 1779379 325 26.9 18.5 3.0 chr7 17299773 17300037 (141838626) C LTR81B LTR/Gypsy (1040) 310 5 1779379 497 27.4 3.6 6.0 chr7 17716099 17716347 (141422316) C MamGypLTR1c LTR/Gypsy (7) 796 554 1779932 328 28.3 2.4 4.8 chr7 18027668 18027793 (141110870) + MamGypLTR2c LTR/Gypsy 87 209 (859) 1780353 308 28.4 7.5 8.9 chr7 18092360 18092572 (141046091) + LTR81C LTR/Gypsy 913 1122 (31) 1780439 702 24.1 2.3 4.1 chr7 18275963 18276218 (140862445) + MamGypLTR2b LTR/Gypsy 721 1054 (14) 1780716 278 28.0 29.4 0.8 chr7 18827561 18827686 (140310977) C LTR81B LTR/Gypsy (213) 1180 1019 1781463 342 27.6 13.9 13.3 chr7 18828522 18828860 (140309803) C LTR81B LTR/Gypsy (950) 443 103 1781463 294 33.8 2.9 2.2 chr7 19288608 19288743 (139849920) + LTR81 LTR/Gypsy 471 607 (582) 1781970 263 26.1 4.2 8.4 chr7 19288763 19288904 (139849759) + LTR81 LTR/Gypsy 873 1008 (145) 1781970 236 39.6 3.0 2.4 chr7 19292418 19292585 (139846078) + MamGypLTR2b LTR/Gypsy 166 334 (588) 1781975 607 29.0 9.2 9.0 chr7 19335521 19335997 (139802666) + LTR81B LTR/Gypsy 2 479 (914) 1782027 426 26.4 3.5 4.7 chr7 19336634 19336804 (139801859) + LTR81B LTR/Gypsy 1200 1368 (25) 1782027 277 34.8 6.9 3.7 chr7 20302398 20302586 (138836077) C LTR81A LTR/Gypsy (739) 611 470 1783188 333 27.6 7.4 0.7 chr7 20621297 20621431 (138517232) C LTR81C LTR/Gypsy (35) 1118 975 1783618 253 26.2 22.8 1.0 chr7 20623272 20623389 (138515274) C LTR81C LTR/Gypsy (222) 967 817 1783618 669 31.9 11.2 6.3 chr7 20624402 20624572 (138514091) C LTR81C LTR/Gypsy (400) 753 571 1783618 669 31.9 11.2 6.3 chr7 20624601 20624920 (138513743) C LTR81C LTR/Gypsy (583) 570 239 1783618 230 34.2 4.4 1.9 chr7 20634413 20634570 (138504093) C MamGypLTR2c LTR/Gypsy (544) 524 363 1783639 321 29.5 8.1 0.8 chr7 20634674 20634796 (138503867) C MamGypLTR2c LTR/Gypsy (933) 135 4 1783639 270 19.6 0.0 0.0 chr7 20724585 20724640 (138414023) C LTR81 LTR/Gypsy (16) 1173 1118 1783775 484 21.1 4.5 0.9 chr7 20913578 20913687 (138224976) + LTR81AB LTR/Gypsy 6 119 (159) 1784086 559 31.1 3.4 9.5 chr7 21160400 21160843 (137977820) C MamGypLTR1a LTR/Gypsy (259) 525 109 1784424 427 24.6 4.9 0.8 chr7 22058080 22058202 (137080461) C MamGypLTR1c LTR/Gypsy (2) 801 674 1785745 322 30.2 17.1 3.1 chr7 22281412 22281763 (136856900) + LTR81B LTR/Gypsy 128 528 (865) 1786045 588 24.2 14.9 8.8 chr7 22342092 22342521 (136796142) + LTR81 LTR/Gypsy 720 1175 (14) 1786119 268 28.8 13.1 7.1 chr7 22742629 22742826 (136395837) + LTR81 LTR/Gypsy 16 225 (964) 1786732 448 29.8 8.1 4.2 chr7 22749366 22749624 (136389039) + LTR81C LTR/Gypsy 878 1146 (7) 1786734 231 30.1 5.6 4.6 chr7 22876839 22876946 (136261717) + LTR81A LTR/Gypsy 57 165 (1185) 1786946 791 25.2 13.1 4.2 chr7 22881698 22882100 (136256563) + LTR81 LTR/Gypsy 733 1178 (172) 1786959 806 30.3 13.9 2.6 chr7 23106865 23107288 (136031375) + LTR81B LTR/Gypsy 1 472 (921) 1787317 259 30.8 11.0 7.1 chr7 23107913 23108094 (136030569) + LTR81B LTR/Gypsy 1205 1393 (0) 1787317 249 23.7 10.0 3.0 chr7 23257614 23257713 (135880950) C MamGypLTR1a LTR/Gypsy (19) 765 659 1787574 373 35.0 7.7 5.7 chr7 23261389 23261598 (135877065) + MamGyp-int LTR/Gypsy 3972 4188 (874) 1787581 373 35.0 7.7 5.7 chr7 23261964 23262088 (135876575) + MamGyp-int LTR/Gypsy 4189 4314 (748) 1787581 474 38.5 2.8 1.7 chr7 23262235 23262522 (135876141) + MamGyp-int LTR/Gypsy 4542 4832 (230) 1787581 431 28.9 1.7 2.8 chr7 23996725 23996902 (135141761) + MamGypLTR1b LTR/Gypsy 604 779 (3) 1788838 716 25.2 15.1 2.0 chr7 24153653 24153944 (134984719) + MamGypLTR1c LTR/Gypsy 57 386 (417) 1789030 230 27.4 13.1 4.4 chr7 24173250 24173432 (134965231) C LTR81A LTR/Gypsy (92) 1258 1060 1789055 237 26.7 12.8 4.3 chr7 24343448 24343588 (134795075) C MamGypLTR2c LTR/Gypsy (41) 1027 875 1789274 584 32.3 5.9 4.6 chr7 24378918 24379222 (134759441) + MamGypLTR3 LTR/Gypsy 480 788 (51) 1789337 613 29.9 19.2 2.8 chr7 24476680 24477043 (134661620) C LTR81C LTR/Gypsy (1) 1152 729 1789490 272 33.5 14.2 5.5 chr7 24477169 24477421 (134661242) C LTR81C LTR/Gypsy (692) 461 187 1789490 255 22.4 0.0 0.0 chr7 24478030 24478078 (134660585) C LTR81B LTR/Gypsy (1079) 314 266 1789493 446 26.8 10.2 10.5 chr7 24826149 24826299 (134312364) C LTR81B LTR/Gypsy (3) 1390 1232 1789996 446 26.8 10.2 10.5 chr7 24826457 24826675 (134311988) C LTR81B LTR/Gypsy (162) 1231 1021 1789996 326 20.9 25.0 0.7 chr7 25246004 25246143 (133892520) C MamGypLTR1c LTR/Gypsy (622) 181 8 1790674 333 26.5 2.1 10.8 chr7 25463027 25463212 (133675451) C MamGypLTR2c LTR/Gypsy (28) 1040 871 1790973 520 31.5 5.8 4.0 chr7 25525460 25525737 (133612926) + MamGypLTR1c LTR/Gypsy 503 785 (18) 1791058 254 35.0 9.3 3.3 chr7 25578776 25579203 (133559460) + MamGypLTR2c LTR/Gypsy 127 588 (565) 1791131 227 28.8 3.6 5.7 chr7 25579479 25579618 (133559045) + MamGypLTR2c LTR/Gypsy 847 983 (85) 1791131 277 22.9 17.8 1.9 chr7 26045839 26045945 (133092718) + LTR81C LTR/Gypsy 84 207 (946) 1791770 262 24.3 11.4 7.4 chr7 26046687 26046883 (133091780) + LTR81C LTR/Gypsy 878 1212 (138) 1791770 268 32.2 13.4 6.4 chr7 26079728 26080055 (133058608) + MamGypLTR1b LTR/Gypsy 212 562 (220) 1791812 408 26.1 6.2 14.3 chr7 26094917 26095189 (133043474) + LTR81C LTR/Gypsy 6 256 (897) 1791838 234 25.6 2.3 6.8 chr7 26095902 26095989 (133042674) + MamGypLTR2c LTR/Gypsy 955 1038 (30) 1791839 275 22.4 1.1 7.6 chr7 26295094 26295185 (132843478) C MamGypLTR1d LTR/Gypsy (727) 86 1 1792191 368 29.8 15.3 5.3 chr7 26630406 26630753 (132507910) + LTR81B LTR/Gypsy 798 1383 (10) 1792753 305 21.9 9.3 1.0 chr7 27772644 27772740 (131365923) C MamGypLTR1c LTR/Gypsy (0) 803 699 1794372 354 32.6 13.4 3.5 chr7 27965928 27966159 (131172504) + MamGypLTR3 LTR/Gypsy 526 780 (59) 1794637 239 25.6 8.4 1.2 chr7 28262612 28262694 (130875969) C MamGypLTR2b LTR/Gypsy (3) 810 735 1795076 300 20.9 10.3 1.1 chr7 28262788 28262874 (130875789) C MamGypLTR2b LTR/Gypsy (83) 839 745 1795078 313 33.5 11.8 4.9 chr7 28263931 28264259 (130874404) C MamGypLTR2b LTR/Gypsy (563) 359 8 1795076 229 22.1 9.0 9.0 chr7 28264766 28264811 (130873852) C MamGypLTR1d LTR/Gypsy (663) 150 96 1795080 229 22.1 9.0 9.0 chr7 28264853 28264939 (130873724) C MamGypLTR1d LTR/Gypsy (718) 95 17 1795080 246 14.8 3.6 1.8 chr7 28280065 28280119 (130858544) + LTR81AB LTR/Gypsy 65 120 (158) 1795116 311 26.9 9.3 2.8 chr7 29025575 29025681 (130112982) C MamGypLTR1c LTR/Gypsy (10) 803 690 1796187 573 26.0 21.4 3.2 chr7 29025711 29026111 (130112552) C MamGypLTR1c LTR/Gypsy (268) 535 62 1796187 250 22.6 3.7 7.4 chr7 29435367 29435487 (129703176) C MamGypLTR2c LTR/Gypsy (31) 1037 842 1796829 370 24.5 3.2 1.3 chr7 29463247 29463405 (129675258) C MamGypLTR2b LTR/Gypsy (51) 871 667 1796869 429 21.9 6.9 5.3 chr7 29659776 29659963 (129478700) + LTR81B LTR/Gypsy 5 195 (1198) 1797142 698 23.9 6.3 3.7 chr7 30157714 30157996 (128980667) + MamGypLTR2b LTR/Gypsy 705 1064 (4) 1797910 345 30.1 19.4 2.2 chr7 30232719 30232985 (128905678) + MamGypLTR1a LTR/Gypsy 277 589 (193) 1798029 274 25.8 5.4 0.0 chr7 30234258 30234350 (128904313) C MamGypLTR1c LTR/Gypsy (6) 797 700 1798033 367 25.2 7.4 4.3 chr7 30234990 30235151 (128903512) C MamGypLTR1c LTR/Gypsy (604) 199 33 1798033 472 31.9 8.9 0.5 chr7 30417157 30417370 (128721293) C MamGypLTR2c LTR/Gypsy (831) 237 6 1798318 240 34.9 1.8 0.9 chr7 30626507 30626616 (128512047) C MamGypLTR1b LTR/Gypsy (303) 479 369 1798602 247 26.4 7.8 2.3 chr7 31711197 31711324 (127427339) C LTR81AB LTR/Gypsy (579) 771 637 1800198 255 25.7 10.2 10.8 chr7 31711638 31711794 (127426869) C LTR81AB LTR/Gypsy (29) 249 94 1800198 322 28.9 16.2 0.6 chr7 31935043 31935202 (127203461) + LTR81A LTR/Gypsy 891 1075 (114) 1800498 361 22.6 6.0 0.0 chr7 31935660 31935743 (127202920) + LTR81A LTR/Gypsy 1231 1319 (31) 1800498 330 35.6 4.5 3.5 chr7 32157901 32158101 (126980562) + MamGypLTR1b LTR/Gypsy 540 742 (40) 1800821 338 25.8 18.7 5.7 chr7 32199148 32199377 (126939286) + LTR81A LTR/Gypsy 17 276 (877) 1800889 525 28.7 5.9 1.9 chr7 32199760 32200029 (126938634) + LTR81A LTR/Gypsy 1070 1350 (0) 1800889 584 30.1 18.1 6.2 chr7 32301790 32302484 (126836179) + MamGypLTR1a LTR/Gypsy 1 777 (7) 1801051 246 30.9 6.2 8.6 chr7 33640482 33640690 (125497973) C MamGypLTR1c LTR/Gypsy (578) 225 22 1803210 328 29.3 10.8 3.1 chr7 33691361 33691582 (125447081) C LTR81B LTR/Gypsy (67) 1326 1088 1803270 662 28.9 9.6 2.0 chr7 33763485 33763777 (125374886) C MamGypLTR1b LTR/Gypsy (2) 780 466 1803379 240 35.3 5.1 0.7 chr7 33933076 33933212 (125205451) + MamGypLTR1a LTR/Gypsy 425 567 (217) 1803654 365 25.2 5.0 1.6 chr7 34356316 34356436 (124782227) C MamGypLTR2b LTR/Gypsy (0) 922 798 1804189 344 29.8 9.0 6.0 chr7 34370688 34370887 (124767776) C MamGypLTR1a LTR/Gypsy (0) 784 579 1804208 348 30.5 8.2 3.4 chr7 34371053 34371344 (124767319) C MamGypLTR1a LTR/Gypsy (469) 315 10 1804208 232 33.1 3.5 2.1 chr7 34397058 34397202 (124741461) C MamGypLTR1a LTR/Gypsy (11) 771 625 1804247 287 26.0 25.8 2.7 chr7 34397256 34397441 (124741222) C MamGypLTR1a LTR/Gypsy (420) 364 136 1804247 457 29.0 6.6 9.2 chr7 34401966 34402435 (124736228) + MamGypLTR1d LTR/Gypsy 3 460 (353) 1804253 432 23.4 2.7 5.4 chr7 34402561 34402709 (124735954) + MamGypLTR1d LTR/Gypsy 658 802 (1) 1804253 226 26.2 0.0 1.5 chr7 34645262 34645327 (124493336) + MamGypLTR3 LTR/Gypsy 773 837 (2) 1804558 294 35.7 5.3 2.1 chr7 34651680 34651868 (124486795) + MamGypLTR3 LTR/Gypsy 202 396 (443) 1804568 269 33.3 6.6 4.8 chr7 34680174 34680340 (124458323) + MamGypLTR2b LTR/Gypsy 99 268 (654) 1804593 247 28.0 1.1 1.1 chr7 34703647 34703740 (124434923) C MamGypLTR2b LTR/Gypsy (6) 916 823 1804629 734 28.5 10.8 2.4 chr7 35508063 35508440 (123630223) C MamGypLTR1a LTR/Gypsy (372) 412 3 1805741 296 27.7 20.9 0.0 chr7 35568836 35568983 (123569680) C MamGypLTR1d LTR/Gypsy (12) 801 623 1805831 580 25.1 7.3 1.7 chr7 35570077 35570254 (123568409) C MamGypLTR1d LTR/Gypsy (603) 210 23 1805831 226 29.6 1.2 2.4 chr7 35650127 35650209 (123488454) + MamGypLTR1b LTR/Gypsy 347 428 (354) 1805972 752 29.6 6.1 5.3 chr7 36110374 36110769 (123027894) + MamGypLTR3 LTR/Gypsy 376 774 (65) 1806710 306 30.0 1.8 0.9 chr7 36655250 36655360 (122483303) + MamGypLTR3 LTR/Gypsy 718 829 (10) 1807588 336 26.8 4.4 1.8 chr7 36751615 36751728 (122386935) + MamGypLTR2c LTR/Gypsy 936 1052 (16) 1807731 363 23.2 9.1 3.5 chr7 36785892 36786034 (122352629) + LTR81C LTR/Gypsy 869 1019 (134) 1807769 288 31.8 13.1 2.4 chr7 37571203 37571408 (121567255) + MamGypLTR2c LTR/Gypsy 105 332 (736) 1808857 480 31.3 12.2 4.1 chr7 37705148 37705583 (121433080) + MamGypLTR1d LTR/Gypsy 341 811 (2) 1809026 274 26.4 6.7 4.4 chr7 38344256 38344390 (120794273) C LTR81B LTR/Gypsy (152) 1241 1104 1809866 284 30.4 7.1 1.6 chr7 38344562 38344688 (120793975) C LTR81B LTR/Gypsy (508) 885 752 1809866 246 33.3 8.9 8.1 chr7 38344801 38345159 (120793504) C LTR81B LTR/Gypsy (809) 541 180 1809866 238 28.5 5.6 9.7 chr7 38345412 38345555 (120793108) C LTR81B LTR/Gypsy (140) 138 1 1809866 324 25.8 17.9 0.0 chr7 38761001 38761151 (120377512) + MamGypLTR2b LTR/Gypsy 745 922 (0) 1810491 630 31.2 14.0 7.7 chr7 39538605 39538799 (119599864) C MamGypLTR1b LTR/Gypsy (1) 781 572 1811537 630 31.2 14.0 7.7 chr7 39539120 39539273 (119599390) C MamGypLTR1b LTR/Gypsy (211) 571 409 1811537 253 27.2 0.0 1.2 chr7 39768600 39768681 (119369982) + MamGypLTR2c LTR/Gypsy 44 124 (944) 1811965 366 31.8 14.2 1.8 chr7 40394510 40394848 (118743815) C MamGypLTR1a LTR/Gypsy (0) 784 404 1813226 520 30.0 7.4 2.3 chr7 40425858 40426072 (118712591) C MamGypLTR1b LTR/Gypsy (14) 768 543 1813272 288 34.7 6.0 5.5 chr7 40426372 40426770 (118711893) C MamGypLTR1b LTR/Gypsy (365) 417 17 1813272 303 23.2 1.2 4.7 chr7 40637028 40637075 (118501588) C MamGypLTR3 LTR/Gypsy (0) 839 792 1813590 303 23.2 1.2 4.7 chr7 40637481 40637517 (118501146) C MamGypLTR3 LTR/Gypsy (48) 791 757 1813590 606 36.5 3.8 1.5 chr7 40967161 40967427 (118171236) C LTR81C LTR/Gypsy (388) 765 493 1814030 295 33.1 20.9 0.5 chr7 41627646 41627836 (117510827) + MamGypLTR1a LTR/Gypsy 346 575 (209) 1814893 234 26.2 0.0 4.5 chr7 41627852 41627939 (117510724) + MamGypLTR1a LTR/Gypsy 638 721 (61) 1814893 233 27.4 9.5 1.4 chr7 41673899 41673972 (117464691) C MamGypLTR1c LTR/Gypsy (532) 271 192 1814961 254 23.3 15.4 2.4 chr7 41674176 41674298 (117464365) C MamGypLTR1c LTR/Gypsy (606) 197 59 1814961 265 27.7 5.3 4.6 chr7 41674840 41675006 (117463657) C MamGypLTR2c LTR/Gypsy (319) 494 225 1814964 302 30.5 1.2 1.7 chr7 41759123 41759261 (117379402) C MamGypLTR1d LTR/Gypsy (3) 919 659 1815072 226 20.9 7.3 1.5 chr7 41759600 41759667 (117378996) C MamGypLTR1c LTR/Gypsy (5) 798 727 1815074 297 29.6 3.5 0.0 chr7 41760003 41760117 (117378546) C MamGypLTR1d LTR/Gypsy (656) 128 10 1815072 309 26.5 5.5 6.2 chr7 42308031 42308175 (116830488) C LTR81A LTR/Gypsy (1107) 243 100 1815784 259 17.0 3.7 1.9 chr7 42809457 42809510 (116329153) C MamGypLTR2c LTR/Gypsy (152) 916 862 1816435 257 40.9 1.7 3.4 chr7 43119288 43119381 (116019282) C MamGypLTR1b LTR/Gypsy (108) 674 580 1816817 257 40.9 1.7 3.4 chr7 43119759 43119840 (116018823) C MamGypLTR1b LTR/Gypsy (203) 579 501 1816817 247 24.1 21.6 2.0 chr7 44134157 44134304 (115004359) + MamGypLTR1c LTR/Gypsy 619 795 (8) 1818517 394 19.6 10.3 0.0 chr7 44551955 44552051 (114586612) C MamGypLTR1b LTR/Gypsy (675) 107 1 1819025 338 28.4 13.3 2.2 chr7 45251460 45251639 (113887024) + LTR81AB LTR/Gypsy 23 222 (56) 1820342 280 27.2 8.8 4.4 chr7 45520738 45520918 (113617745) C LTR81B LTR/Gypsy (1101) 292 104 1820665 316 28.4 1.6 7.2 chr7 45683634 45683758 (113454905) C MamGypLTR2c LTR/Gypsy (101) 967 850 1820857 249 29.6 0.8 1.7 chr7 46541939 46542055 (112596608) + MamGypLTR2b LTR/Gypsy 711 826 (96) 1821951 317 22.3 1.0 2.1 chr7 47194761 47194856 (111943807) + MamGypLTR2b LTR/Gypsy 828 922 (0) 1822800 310 30.6 3.4 1.3 chr7 47695127 47695275 (111443388) + MamGypLTR1a LTR/Gypsy 598 749 (35) 1823441 234 30.0 0.0 1.4 chr7 48360609 48360679 (110777984) + LTR81A LTR/Gypsy 79 148 (1005) 1824354 474 27.8 13.0 0.6 chr7 48361532 48361708 (110776955) + LTR81A LTR/Gypsy 1112 1310 (40) 1824354 293 23.5 5.0 1.0 chr7 49077172 49077270 (110061393) + MamGypLTR1d LTR/Gypsy 711 813 (0) 1825244 293 32.9 11.1 2.8 chr7 49174970 49175185 (109963478) + MamGypLTR1b LTR/Gypsy 2 235 (547) 1825357 285 39.2 8.1 0.0 chr7 49701150 49701297 (109437366) C LTR81B LTR/Gypsy (517) 876 717 1826031 244 31.2 24.1 3.4 chr7 50231845 50232139 (108906524) C MamGypLTR3 LTR/Gypsy (9) 830 475 1826700 352 28.4 14.3 5.0 chr7 50487827 50488126 (108650537) C MamGypLTR1a LTR/Gypsy (19) 765 438 1826918 243 26.3 11.1 2.6 chr7 50488440 50488556 (108650107) C MamGypLTR1a LTR/Gypsy (657) 127 1 1826918 284 22.2 0.0 0.0 chr7 50493858 50493911 (108644752) C MamGypLTR1d LTR/Gypsy (1) 812 759 1826932 538 39.2 11.3 0.0 chr7 50886004 50886225 (108252438) C LTR81B LTR/Gypsy (544) 849 603 1827402 371 25.9 7.5 1.5 chr7 51394605 51394737 (107743926) C MamGypLTR3 LTR/Gypsy (53) 786 646 1828050 749 36.9 7.1 2.5 chr7 51483674 51483863 (107654800) C LTR81B LTR/Gypsy (592) 801 609 1828213 749 36.9 7.1 2.5 chr7 51484265 51484554 (107654109) C LTR81B LTR/Gypsy (785) 608 299 1828213 268 15.6 0.0 0.0 chr7 51484964 51485008 (107653655) + MamGypLTR1a LTR/Gypsy 2 46 (738) 1828216 296 27.1 5.3 10.7 chr7 52177050 52177129 (106961534) + LTR81A LTR/Gypsy 45 118 (1232) 1829034 296 27.1 5.3 10.7 chr7 52177498 52177585 (106961078) + LTR81A LTR/Gypsy 119 204 (1146) 1829034 226 33.9 5.2 3.5 chr7 52178193 52178308 (106960355) + LTR81B LTR/Gypsy 863 980 (413) 1829037 292 25.4 10.0 12.0 chr7 52230427 52230676 (106907987) + MamGypLTR2c LTR/Gypsy 805 1049 (19) 1829104 350 33.5 11.9 4.4 chr7 52429073 52429366 (106709297) + MamGypLTR1a LTR/Gypsy 5 320 (464) 1829378 252 35.5 0.0 2.6 chr7 54139372 54139484 (104999179) C MamGypLTR3 LTR/Gypsy (15) 824 715 1831629 304 16.7 6.3 1.3 chr7 54154579 54154657 (104984006) C MamGypLTR1b LTR/Gypsy (8) 774 692 1831651 243 29.1 2.4 7.9 chr7 54179433 54179559 (104959104) + LTR81C LTR/Gypsy 34 153 (1000) 1831686 264 27.9 1.3 0.0 chr7 55567668 55567746 (103570917) + MamGypLTR3 LTR/Gypsy 719 798 (41) 1833348 241 32.6 3.2 1.1 chr7 55674319 55674411 (103464252) C LTR81B LTR/Gypsy (571) 779 685 1833483 563 32.5 9.2 2.8 chr7 55674918 55675199 (103463464) C LTR81B LTR/Gypsy (795) 598 299 1833483 250 15.6 0.0 0.0 chr7 55675605 55675649 (103463014) + MamGypLTR1a LTR/Gypsy 2 46 (738) 1833486 346 26.5 5.2 7.7 chr7 56253771 56254003 (102884660) C LTR81B LTR/Gypsy (1112) 281 55 1834724 305 30.6 6.8 8.7 chr7 56981851 56982115 (102156548) C LTR81B LTR/Gypsy (90) 1303 1044 1835958 337 31.6 3.2 4.5 chr7 62196961 62197116 (96941547) + MamGypLTR2c LTR/Gypsy 729 882 (186) 1838068 282 31.4 5.0 3.8 chr7 62453428 62453586 (96685077) + MamGypLTR2c LTR/Gypsy 774 934 (134) 1838107 305 30.6 6.8 8.7 chr7 63122911 63123175 (96015488) + LTR81B LTR/Gypsy 1044 1303 (90) 1839340 249 29.3 2.7 0.0 chr7 65648606 65648680 (93489983) C MamGypLTR1a LTR/Gypsy (64) 720 644 1843710 305 29.4 0.9 5.2 chr7 65727688 65727802 (93410861) C LTR81C LTR/Gypsy (1037) 116 7 1843888 307 29.3 8.6 0.7 chr7 65991048 65991198 (93147465) C MamGypLTR1d LTR/Gypsy (10) 803 641 1844430 277 16.2 2.7 6.8 chr7 66273607 66273679 (92864984) + MamGypLTR1a LTR/Gypsy 365 434 (350) 1845081 261 22.2 18.3 1.2 chr7 67090208 67090289 (92048374) C MamGypLTR3 LTR/Gypsy (88) 751 656 1846834 499 30.2 9.6 1.6 chr7 67090315 67090617 (92048046) C MamGypLTR3 LTR/Gypsy (226) 613 287 1846834 236 33.8 0.0 1.4 chr7 67090703 67090771 (92047892) C MamGypLTR3 LTR/Gypsy (763) 76 9 1846834 339 34.2 10.0 6.6 chr7 67310910 67311500 (91827163) + MamGypLTR3 LTR/Gypsy 135 745 (94) 1847314 344 26.4 3.6 1.8 chr7 67614796 67614907 (91523756) C MamGypLTR1b LTR/Gypsy (41) 741 628 1848007 233 25.0 8.3 0.0 chr7 68063557 68063628 (91075035) C MamGypLTR1c LTR/Gypsy (725) 78 1 1848951 614 33.9 12.0 4.2 chr7 68135932 68136635 (91002028) + MamGypLTR1c LTR/Gypsy 27 780 (23) 1849089 263 22.7 1.6 12.7 chr7 68228740 68228820 (90909843) + MamGypLTR2b LTR/Gypsy 773 853 (69) 1849293 263 22.7 1.6 12.7 chr7 68229136 68229179 (90909484) + MamGypLTR2b LTR/Gypsy 854 884 (38) 1849293 297 24.9 8.4 4.9 chr7 68644818 68645020 (90493643) + LTR81B LTR/Gypsy 72 281 (1112) 1850176 354 28.7 5.9 1.6 chr7 69974832 69975051 (89163612) C MamGypLTR1c LTR/Gypsy (12) 791 567 1852429 579 26.4 4.1 2.6 chr7 71018622 71018815 (88119848) C MamGypLTR2c LTR/Gypsy (11) 1057 861 1854396 320 29.4 2.4 3.0 chr7 71019492 71019635 (88119028) C LTR81A LTR/Gypsy (600) 793 644 1854398 272 25.1 9.0 12.8 chr7 71020795 71021082 (88117581) C LTR81A LTR/Gypsy (1064) 286 10 1854398 254 26.7 2.2 3.4 chr7 71204918 71205006 (87933657) C LTR81B LTR/Gypsy (1092) 301 214 1854792 238 30.5 9.3 1.9 chr7 71854570 71854622 (87284041) C LTR81AB LTR/Gypsy (159) 119 57 1856133 238 30.5 9.3 1.9 chr7 71854944 71854996 (87283667) C LTR81AB LTR/Gypsy (222) 56 5 1856133 260 29.5 16.8 0.9 chr7 72452842 72452954 (86685709) + LTR81A LTR/Gypsy 43 173 (1177) 1857373 281 28.9 15.4 1.6 chr7 72817041 72817163 (86321500) + LTR81A LTR/Gypsy 43 182 (1168) 1858213 288 31.9 15.0 0.0 chr7 73160674 73160833 (85977830) + MamGypLTR1d LTR/Gypsy 19 202 (611) 1859021 386 31.6 11.0 7.1 chr7 73160907 73161184 (85977479) + MamGypLTR1d LTR/Gypsy 405 699 (114) 1859021 386 31.6 11.0 7.1 chr7 73161480 73161592 (85977071) + MamGypLTR1d LTR/Gypsy 700 811 (2) 1859021 266 29.7 5.4 0.0 chr7 73235992 73236102 (85902561) + MamGypLTR1d LTR/Gypsy 661 777 (36) 1859216 251 29.8 15.3 0.0 chr7 73259574 73259704 (85878959) C MamGypLTR1d LTR/Gypsy (497) 316 166 1859264 317 23.3 4.2 1.8 chr7 73977245 73977382 (85161281) C MamGypLTR2b LTR/Gypsy (27) 895 628 1860984 238 29.8 15.4 1.6 chr7 75011942 75012064 (84126599) C LTR81A LTR/Gypsy (1168) 182 43 1863479 466 33.6 6.8 3.6 chr7 76573154 76573434 (82565229) C MamGypLTR3 LTR/Gypsy (83) 756 467 1866816 294 25.0 8.6 1.1 chr7 76573450 76573542 (82565121) C MamGypLTR3 LTR/Gypsy (446) 393 294 1866816 1120 29.5 10.1 6.0 chr7 76573644 76574394 (82564269) C MamGypLTR1c LTR/Gypsy (5) 798 17 1866817 770 32.2 15.0 5.0 chr7 77063177 77063735 (82074928) C MamGypLTR2c LTR/Gypsy (0) 1068 454 1867588 314 25.7 12.2 6.5 chr7 77064003 77064231 (82074432) + MamGypLTR2c LTR/Gypsy 812 1053 (15) 1867589 251 18.0 9.8 0.0 chr7 77076378 77076438 (82062225) + LTR81B LTR/Gypsy 128 194 (1199) 1867617 405 26.4 2.4 1.6 chr7 77080708 77080830 (82057833) + LTR81B LTR/Gypsy 1268 1391 (2) 1867625 1024 30.8 10.2 8.5 chr7 77143897 77144422 (81994241) + MamGypLTR1c LTR/Gypsy 3 522 (281) 1867760 1024 30.8 10.2 8.5 chr7 77144947 77145186 (81993477) + MamGypLTR1c LTR/Gypsy 523 782 (21) 1867760 238 29.0 7.8 8.6 chr7 78016648 78016961 (81121702) + MamGypLTR2c LTR/Gypsy 782 1095 (58) 1869173 235 33.2 8.7 7.5 chr7 78017302 78017330 (81121333) + MamGypLTR2c LTR/Gypsy 1096 1130 (23) 1869173 466 30.5 7.7 10.7 chr7 79861294 79861631 (79277032) + MamGypLTR3 LTR/Gypsy 479 806 (33) 1871686 229 28.6 0.0 0.0 chr7 79882853 79882922 (79255741) + MamGypLTR1a LTR/Gypsy 665 734 (50) 1871714 506 34.8 5.1 1.0 chr7 80208520 80208812 (78929851) C MamGypLTR1b LTR/Gypsy (0) 782 478 1872181 703 24.9 4.7 4.2 chr7 80209682 80209895 (78928768) C MamGypLTR1a LTR/Gypsy (569) 215 1 1872183 350 30.0 17.2 5.4 chr7 80351738 80352068 (78786595) C MamGypLTR1a LTR/Gypsy (414) 370 1 1872348 239 30.1 5.1 3.4 chr7 81557554 81557670 (77580993) + MamGypLTR2c LTR/Gypsy 892 1010 (58) 1874033 267 26.8 1.5 6.8 chr7 82033783 82033914 (77104749) + MamGypLTR2b LTR/Gypsy 772 896 (26) 1874694 455 30.4 8.4 4.4 chr7 82101156 82101430 (77037233) C LTR81A LTR/Gypsy (1063) 287 2 1874791 457 36.3 8.3 5.0 chr7 82485112 82485590 (76653073) + MamGypLTR1b LTR/Gypsy 252 746 (36) 1875314 269 23.7 5.4 8.5 chr7 82619812 82619940 (76518723) + MamGypLTR1c LTR/Gypsy 706 922 (0) 1875481 325 22.8 8.2 5.2 chr7 82804001 82804134 (76334529) + MamGypLTR1a LTR/Gypsy 2 139 (645) 1875765 495 26.8 13.8 0.5 chr7 82804373 82804567 (76334096) + MamGypLTR1a LTR/Gypsy 555 775 (9) 1875765 632 28.4 3.5 5.5 chr7 82834535 82834791 (76303872) + LTR81AB LTR/Gypsy 3 254 (24) 1875796 320 34.0 9.3 4.2 chr7 82834831 82835045 (76303618) + LTR81AB LTR/Gypsy 790 1015 (174) 1875796 228 13.7 1.9 3.8 chr7 82835225 82835277 (76303386) + LTR81B LTR/Gypsy 1217 1268 (125) 1875799 536 34.8 12.9 5.4 chr7 82835311 82835393 (76303270) C LTR81 LTR/Gypsy (567) 622 539 1875800 536 34.8 12.9 5.4 chr7 82835969 82836309 (76302354) C LTR81 LTR/Gypsy (651) 538 167 1875800 305 29.0 8.8 6.1 chr7 82836335 82836481 (76302182) C LTR81AB LTR/Gypsy (2) 276 126 1875802 269 28.6 14.7 6.7 chr7 82883646 82883795 (76254868) + MamGypLTR1a LTR/Gypsy 45 206 (578) 1875862 256 40.4 0.0 1.8 chr7 82884596 82884706 (76253957) + MamGypLTR1b LTR/Gypsy 467 575 (207) 1875865 759 30.4 9.2 3.9 chr7 83177731 83178396 (75960267) C MamGypLTR1b LTR/Gypsy (36) 748 19 1876265 377 26.0 4.8 2.4 chr7 83415944 83416069 (75722594) + LTR81B LTR/Gypsy 194 322 (1071) 1876590 449 22.0 8.0 5.6 chr7 83698373 83698497 (75440166) + MamGypLTR1b LTR/Gypsy 655 782 (0) 1876972 282 28.6 1.2 2.3 chr7 84240163 84240248 (74898415) + LTR81A LTR/Gypsy 95 179 (1171) 1877674 259 21.3 0.0 9.6 chr7 84240463 84240545 (74898118) + LTR81A LTR/Gypsy 1248 1322 (28) 1877675 360 28.9 7.6 1.4 chr7 84823841 84823984 (74314679) C MamGypLTR2b LTR/Gypsy (131) 791 639 1878447 270 28.3 4.3 2.6 chr7 84835662 84835777 (74302886) C LTR81B LTR/Gypsy (1109) 284 167 1878463 278 36.1 9.2 7.1 chr7 84863562 84863856 (74274807) + MamGyp-int LTR/Gypsy 1352 1652 (3410) 1878499 301 40.6 3.7 0.5 chr7 84968774 84968961 (74169702) C MamGypLTR2c LTR/Gypsy (613) 455 262 1878622 227 32.2 1.9 6.9 chr7 84969491 84969650 (74169013) C LTR81AB LTR/Gypsy (123) 155 4 1878626 361 22.9 0.9 8.7 chr7 85474443 85474557 (73664106) C LTR81A LTR/Gypsy (46) 1304 1199 1879257 455 38.0 4.4 4.8 chr7 85873128 85873632 (73265031) C LTR81A LTR/Gypsy (2) 1348 846 1879753 386 28.1 12.7 4.5 chr7 86631009 86631299 (72507364) + LTR81C LTR/Gypsy 832 1146 (7) 1880708 932 30.4 17.9 1.2 chr7 86713962 86714374 (72424289) + LTR81C LTR/Gypsy 556 1037 (116) 1880815 557 31.9 15.4 3.6 chr7 86772163 86772494 (72366169) + MamGypLTR2c LTR/Gypsy 6 376 (692) 1880903 230 32.2 0.0 0.0 chr7 86773876 86773933 (72364730) + MamGypLTR2c LTR/Gypsy 375 432 (636) 1880903 484 33.0 14.1 1.9 chr7 87203391 87203816 (71934847) + MamGypLTR1c LTR/Gypsy 326 803 (0) 1881438 495 20.1 12.0 6.8 chr7 88621454 88621645 (70517018) C LTR81B LTR/Gypsy (1131) 262 61 1883341 318 31.5 0.0 5.1 chr7 89481977 89482063 (69656600) C MamGypLTR3 LTR/Gypsy (9) 830 749 1884391 318 31.5 0.0 5.1 chr7 89482422 89482450 (69656213) C MamGypLTR3 LTR/Gypsy (91) 748 720 1884391 227 28.4 12.6 1.8 chr7 89544066 89544176 (69594487) + LTR81C LTR/Gypsy 489 611 (542) 1884461 272 22.7 4.5 0.0 chr7 89544607 89544672 (69593991) + LTR81C LTR/Gypsy 1057 1125 (28) 1884461 361 29.2 2.8 0.0 chr7 89684585 89684690 (69453973) C MamGypLTR1c LTR/Gypsy (641) 162 54 1884661 288 25.5 7.3 2.8 chr7 89712113 89712221 (69426442) + MamGypLTR1b LTR/Gypsy 3 116 (666) 1884682 695 34.5 11.4 2.9 chr7 90102159 90102910 (69035753) + MamGypLTR2c LTR/Gypsy 159 974 (94) 1885243 302 27.4 8.6 0.0 chr7 90187974 90188090 (68950573) + MamGypLTR2c LTR/Gypsy 873 999 (69) 1885367 271 19.1 13.9 2.8 chr7 91131995 91132102 (68006561) C LTR81AB LTR/Gypsy (30) 248 129 1886586 495 25.0 10.7 1.9 chr7 91188120 91188335 (67950328) + MamGypLTR1d LTR/Gypsy 1 235 (578) 1886640 238 26.1 0.0 0.0 chr7 91203530 91203598 (67935065) C LTR81 LTR/Gypsy (8) 1181 1113 1886662 306 29.1 22.8 4.0 chr7 91258700 91259028 (67879635) C LTR81B LTR/Gypsy (0) 1393 1003 1886740 302 34.5 11.7 6.5 chr7 91316840 91317397 (67821266) C LTR81C LTR/Gypsy (542) 611 25 1886823 451 34.2 20.0 4.2 chr7 91998460 91999054 (67139609) C MamGypLTR3 LTR/Gypsy (79) 760 72 1887840 382 27.5 11.3 6.0 chr7 92049347 92049594 (67089069) + LTR81B LTR/Gypsy 1052 1312 (81) 1887899 339 28.1 7.3 3.3 chr7 92486322 92486472 (66652191) C MamGypLTR2c LTR/Gypsy (910) 158 2 1888536 402 21.4 6.0 5.4 chr7 92628647 92628814 (66509849) C MamGypLTR2b LTR/Gypsy (2) 920 752 1888733 434 26.4 5.9 3.0 chr7 93060173 93060415 (66078248) + LTR81AB LTR/Gypsy 127 377 (973) 1889236 940 33.5 6.3 2.1 chr7 93359518 93359995 (65778668) + LTR81A LTR/Gypsy 5 502 (848) 1889663 252 26.1 1.5 0.0 chr7 93360067 93360131 (65778532) + LTR81A LTR/Gypsy 450 515 (638) 1889664 289 27.3 11.8 9.6 chr7 93360700 93360970 (65777693) + LTR81A LTR/Gypsy 1057 1333 (17) 1889664 573 35.1 8.9 3.6 chr7 93681133 93681625 (65457038) + MamGypLTR1a LTR/Gypsy 266 784 (0) 1890094 237 20.9 0.0 0.0 chr7 93721655 93721697 (65416966) C MamGypLTR1a LTR/Gypsy (2) 782 740 1890145 254 29.1 2.0 8.2 chr7 93722091 93722236 (65416427) C MamGypLTR1a LTR/Gypsy (647) 137 1 1890145 337 25.2 4.7 4.7 chr7 93750905 93751075 (65387588) C MamGypLTR2b LTR/Gypsy (5) 917 747 1890191 269 33.2 5.5 7.1 chr7 94987367 94987619 (64151044) C MamGypLTR2c LTR/Gypsy (694) 374 35 1891809 988 29.6 19.0 3.9 chr7 95021801 95022458 (64116205) C MamGypLTR1b LTR/Gypsy (0) 782 26 1891841 330 30.1 5.4 2.4 chr7 95096900 95097066 (64041597) C MamGypLTR1b LTR/Gypsy (7) 775 604 1891987 269 24.2 3.2 3.2 chr7 95097143 95097236 (64041427) C MamGypLTR1b LTR/Gypsy (688) 94 1 1891987 763 29.2 6.2 6.3 chr7 95111674 95112329 (64026334) + LTR81B LTR/Gypsy 22 585 (808) 1892012 384 26.9 5.4 5.1 chr7 95112371 95112559 (64026104) + LTR81B LTR/Gypsy 991 1092 (301) 1892012 498 26.2 9.5 4.6 chr7 95112685 95112950 (64025713) + LTR81B LTR/Gypsy 884 1353 (40) 1892013 228 38.0 1.1 2.1 chr7 95233143 95233236 (63905427) C MamGypLTR2b LTR/Gypsy (567) 355 263 1892197 325 40.4 2.2 3.5 chr7 95360025 95360250 (63778413) + MamGyp-int LTR/Gypsy 3739 3961 (1101) 1892392 228 20.8 0.0 1.9 chr7 95504673 95504726 (63633937) C LTR81A LTR/Gypsy (15) 1335 1283 1892560 395 29.4 5.5 4.4 chr7 95505674 95505947 (63632716) C LTR81B LTR/Gypsy (1116) 277 1 1892561 301 28.3 6.0 2.6 chr7 95677910 95678025 (63460638) C MamGypLTR1c LTR/Gypsy (68) 735 616 1892776 270 31.7 1.6 4.0 chr7 96672445 96672569 (62466094) + LTR81A LTR/Gypsy 264 385 (1008) 1894108 532 29.5 5.4 6.7 chr7 96673383 96673622 (62465041) + LTR81A LTR/Gypsy 1017 1253 (97) 1894108 699 27.6 8.8 3.7 chr7 96674302 96674654 (62464009) + LTR81C LTR/Gypsy 739 1109 (44) 1894111 283 28.7 10.2 7.1 chr7 97141692 97141916 (61996747) + LTR81B LTR/Gypsy 224 455 (938) 1894834 497 35.8 9.9 2.8 chr7 97155569 97156073 (61982590) + MamGypLTR2c LTR/Gypsy 2 542 (526) 1894855 308 29.0 5.1 7.6 chr7 97156297 97156453 (61982210) + MamGypLTR2c LTR/Gypsy 801 953 (115) 1894855 349 24.8 0.9 0.9 chr7 97183384 97183489 (61955174) C MamGypLTR2b LTR/Gypsy (85) 837 732 1894881 400 33.0 2.0 3.4 chr7 97605000 97605199 (61533464) + MamGypLTR2b LTR/Gypsy 161 456 (612) 1895459 249 20.4 12.4 1.2 chr7 97605462 97605562 (61533101) + MamGypLTR2b LTR/Gypsy 704 885 (37) 1895460 274 26.7 13.4 2.0 chr7 98154648 98154793 (60983870) + MamGypLTR1a LTR/Gypsy 84 246 (538) 1896663 278 22.5 4.3 3.4 chr7 98434846 98434939 (60703724) + MamGypLTR1b LTR/Gypsy 4 92 (692) 1897302 440 26.1 21.5 2.5 chr7 99944577 99944776 (59193887) C MamGypLTR1c LTR/Gypsy (0) 803 566 1900104 254 29.6 9.8 7.8 chr7 101676145 101676349 (57462314) C LTR81B LTR/Gypsy (140) 1253 1045 1903680 479 33.8 5.0 5.6 chr7 102626904 102627223 (56511440) + MamGypLTR1b LTR/Gypsy 447 764 (18) 1905498 365 30.1 7.8 1.7 chr7 103250588 103250832 (55887831) + LTR81A LTR/Gypsy 12 271 (1122) 1906407 619 27.4 3.8 7.6 chr7 103380459 103380746 (55757917) + MamGypLTR1c LTR/Gypsy 527 803 (0) 1906564 244 33.6 13.1 3.2 chr7 103878881 103879132 (55259531) C MamGypLTR1b LTR/Gypsy (68) 714 438 1907291 402 21.0 2.0 2.0 chr7 103879365 103879466 (55259197) C MamGypLTR1b LTR/Gypsy (674) 108 7 1907292 382 29.2 5.3 8.0 chr7 103929474 103929774 (55208889) C LTR81B LTR/Gypsy (1073) 320 28 1907346 605 32.2 12.8 1.3 chr7 103942165 103942539 (55196124) + MamGypLTR1c LTR/Gypsy 1 418 (385) 1907370 385 27.7 3.0 6.1 chr7 103943842 103944006 (55194657) + MamGypLTR1c LTR/Gypsy 625 784 (0) 1907370 313 28.2 9.7 2.9 chr7 104172132 104172306 (54966357) C MamGypLTR1c LTR/Gypsy (0) 803 617 1907709 272 27.0 10.4 7.3 chr7 104172970 104173161 (54965502) C MamGypLTR1c LTR/Gypsy (477) 326 129 1907709 385 28.7 4.2 1.8 chr7 104328176 104328410 (54810253) + MamGypLTR1d LTR/Gypsy 527 804 (9) 1907888 302 19.1 24.3 0.9 chr7 104410382 104410492 (54728171) + LTR81B LTR/Gypsy 143 279 (1114) 1907983 691 31.5 12.3 6.7 chr7 104441177 104441976 (54696687) + LTR81C LTR/Gypsy 295 1214 (136) 1908019 238 18.8 3.0 3.0 chr7 105586248 105586313 (53552350) + MamGypLTR2b LTR/Gypsy 16 81 (841) 1910208 606 31.4 2.5 2.1 chr7 105586819 105587059 (53551604) + MamGypLTR2b LTR/Gypsy 681 922 (0) 1910209 254 24.7 8.3 3.1 chr7 105968738 105968833 (53169830) + MamGypLTR1d LTR/Gypsy 465 565 (248) 1910764 469 32.4 4.3 5.6 chr7 105968825 105969128 (53169535) + MamGypLTR1c LTR/Gypsy 501 800 (3) 1910765 226 31.7 4.0 0.8 chr7 106165255 106165378 (52973285) C MamGypLTR1b LTR/Gypsy (48) 734 607 1911024 855 28.5 15.9 2.7 chr7 106217254 106217960 (52920703) C MamGypLTR1c LTR/Gypsy (0) 813 1 1911085 350 22.9 3.8 0.9 chr7 106390479 106390584 (52748079) C MamGypLTR2c LTR/Gypsy (69) 853 745 1911317 424 24.3 0.7 2.8 chr7 106391471 106391614 (52747049) C MamGypLTR2c LTR/Gypsy (878) 190 50 1911317 237 28.2 6.4 0.0 chr7 106422214 106422291 (52716372) + MamGypLTR2c LTR/Gypsy 22 104 (964) 1911365 356 27.1 6.8 12.7 chr7 106493623 106493797 (52644866) C LTR81C LTR/Gypsy (38) 1115 943 1911469 356 27.1 6.8 12.7 chr7 106494105 106494283 (52644380) C LTR81C LTR/Gypsy (211) 942 783 1911469 297 26.3 14.6 4.5 chr7 107467515 107467713 (51670950) C LTR81A LTR/Gypsy (66) 1284 1066 1912975 871 15.5 2.2 10.8 chr7 107468360 107468590 (51670073) C LTR81B LTR/Gypsy (1071) 322 112 1912976 323 32.5 6.2 8.7 chr7 107991927 107992202 (51146461) + MamGypLTR3 LTR/Gypsy 565 833 (6) 1913691 300 30.2 3.6 5.4 chr7 108231393 108231560 (50907103) + MamGypLTR1a LTR/Gypsy 552 716 (68) 1914050 363 29.9 14.4 4.4 chr7 108270806 108271172 (50867491) + LTR81A LTR/Gypsy 940 1343 (7) 1914097 556 34.5 6.9 4.1 chr7 108658970 108659435 (50479228) + LTR81A LTR/Gypsy 365 843 (507) 1914558 230 32.7 4.6 1.8 chr7 108919711 108919744 (50218919) + LTR81A LTR/Gypsy 3 40 (238) 1914897 230 32.7 4.6 1.8 chr7 108919768 108919841 (50218822) + LTR81A LTR/Gypsy 41 114 (164) 1914897 257 28.8 8.4 7.0 chr7 108919895 108920036 (50218627) + LTR81A LTR/Gypsy 211 354 (996) 1914897 268 30.1 8.1 2.2 chr7 110023398 110023533 (49115130) C LTR81B LTR/Gypsy (176) 1174 1031 1916226 658 26.6 12.7 9.1 chr7 110024242 110024580 (49114083) C LTR81B LTR/Gypsy (1039) 354 4 1916226 347 32.6 11.1 6.8 chr7 110611432 110611826 (48526837) + MamGypLTR2b LTR/Gypsy 504 915 (7) 1916970 347 27.4 10.2 5.4 chr7 110992571 110992818 (48145845) C MamGypLTR2b LTR/Gypsy (113) 955 642 1917458 380 29.5 1.8 8.0 chr7 111442089 111442313 (47696350) + MamGypLTR1a LTR/Gypsy 19 229 (555) 1918115 266 26.7 2.5 15.8 chr7 111442469 111442588 (47696075) + MamGypLTR1a LTR/Gypsy 574 677 (107) 1918115 321 27.5 6.6 0.0 chr7 112164314 112164404 (46974259) + MamGypLTR1a LTR/Gypsy 90 186 (598) 1919143 233 29.1 5.7 1.9 chr7 112260217 112260321 (46878342) C MamGypLTR3 LTR/Gypsy (136) 703 595 1919280 235 30.8 18.8 0.6 chr7 113011410 113011579 (46127084) C MamGypLTR1a LTR/Gypsy (0) 813 613 1920232 486 32.7 9.6 1.3 chr7 113011601 113011901 (46126762) C MamGypLTR1a LTR/Gypsy (453) 331 6 1920232 294 27.5 8.0 5.5 chr7 113061676 113061875 (46076788) C MamGypLTR2b LTR/Gypsy (134) 788 584 1920295 263 30.8 10.7 9.0 chr7 113147904 113148091 (45990572) + LTR81B LTR/Gypsy 1088 1289 (104) 1920389 263 30.8 10.7 9.0 chr7 113148401 113148500 (45990163) + LTR81B LTR/Gypsy 1290 1381 (12) 1920389 227 37.6 6.6 2.8 chr7 113268527 113268603 (45870060) C LTR81C LTR/Gypsy (931) 222 138 1920537 227 37.6 6.6 2.8 chr7 113269693 113269825 (45868838) C LTR81C LTR/Gypsy (1016) 137 4 1920537 421 27.0 9.2 7.3 chr7 113608443 113608702 (45529961) C LTR81B LTR/Gypsy (45) 1348 1084 1920965 285 26.8 13.6 3.8 chr7 113613801 113613900 (45524763) + MamGypLTR3 LTR/Gypsy 97 212 (627) 1920975 285 26.8 13.6 3.8 chr7 113614170 113614200 (45524463) + MamGypLTR3 LTR/Gypsy 213 241 (598) 1920975 720 31.5 10.6 5.6 chr7 113664965 113665445 (45473218) C MamGypLTR1c LTR/Gypsy (63) 740 236 1921050 265 27.6 0.9 6.2 chr7 114341687 114341798 (44796865) C LTR81A LTR/Gypsy (1177) 173 68 1921930 248 23.1 7.2 14.5 chr7 114420640 114420791 (44717872) C LTR81B LTR/Gypsy (9) 1384 1244 1922041 374 35.0 2.6 5.7 chr7 114421193 114421422 (44717241) C LTR81B LTR/Gypsy (467) 883 661 1922043 402 30.6 5.1 5.8 chr7 114421875 114421926 (44716737) C LTR81B LTR/Gypsy (949) 444 395 1922043 402 30.6 5.1 5.8 chr7 114422359 114422562 (44716101) C LTR81B LTR/Gypsy (999) 394 190 1922043 251 33.9 12.9 10.4 chr7 114848573 114848852 (44289811) + LTR81C LTR/Gypsy 12 298 (855) 1922611 503 31.1 9.7 2.0 chr7 114849325 114849679 (44288984) C LTR81B LTR/Gypsy (1000) 393 18 1922612 283 23.3 21.4 0.0 chr7 114910856 114910958 (44227705) + MamGypLTR1d LTR/Gypsy 5 129 (684) 1922703 346 30.1 6.2 5.9 chr7 115160251 115160539 (43978124) + LTR81A LTR/Gypsy 23 312 (1038) 1923061 519 23.6 5.0 1.9 chr7 115268384 115268543 (43870120) C MamGypLTR2b LTR/Gypsy (28) 894 730 1923196 417 22.4 17.0 0.7 chr7 115392440 115392574 (43746089) C MamGypLTR2c LTR/Gypsy (8) 1060 904 1923348 636 23.4 12.0 5.0 chr7 115562028 115562328 (43576335) + LTR81B LTR/Gypsy 4 325 (1068) 1923600 325 32.6 15.5 0.0 chr7 115745119 115745299 (43393364) + LTR81C LTR/Gypsy 68 276 (877) 1923797 241 29.1 3.3 2.5 chr7 115745807 115745926 (43392737) + LTR81C LTR/Gypsy 1122 1242 (108) 1923797 359 27.2 6.3 9.7 chr7 115810335 115810509 (43328154) + LTR81AB LTR/Gypsy 76 244 (34) 1923891 320 24.0 15.7 8.8 chr7 115811457 115811668 (43326995) + LTR81AB LTR/Gypsy 903 1325 (25) 1923891 390 26.4 7.0 7.9 chr7 115952355 115952568 (43186095) C MamGypLTR3 LTR/Gypsy (597) 242 31 1924076 938 23.8 4.8 6.2 chr7 115975033 115975404 (43163259) + LTR81A LTR/Gypsy 14 380 (970) 1924105 606 35.9 10.9 3.0 chr7 115975658 115976051 (43162612) + LTR81A LTR/Gypsy 486 910 (243) 1924105 421 26.8 0.9 9.8 chr7 116022538 116022752 (43115911) + LTR81A LTR/Gypsy 1122 1317 (33) 1924163 295 20.7 1.1 3.3 chr7 116160424 116160513 (42978150) + MamGypLTR2b LTR/Gypsy 788 875 (47) 1924356 611 33.5 2.3 0.0 chr7 116216758 116217041 (42921622) + MamGypLTR1b LTR/Gypsy 272 566 (216) 1924444 278 27.4 6.1 1.8 chr7 116217061 116217202 (42921461) + MamGypLTR1b LTR/Gypsy 650 779 (3) 1924444 282 26.9 4.5 3.0 chr7 116262422 116262555 (42876108) C MamGypLTR1b LTR/Gypsy (628) 154 19 1924510 724 29.7 0.7 2.5 chr7 116270233 116270515 (42868148) + LTR81A LTR/Gypsy 18 295 (1055) 1924520 226 33.2 8.8 5.8 chr7 116574390 116574629 (42564034) + MamGypLTR2b LTR/Gypsy 538 784 (138) 1924998 409 21.6 7.8 0.0 chr7 116631245 116631346 (42507317) C MamGypLTR1d LTR/Gypsy (641) 172 63 1925118 719 30.2 5.3 4.1 chr7 116792730 116793071 (42345592) C MamGyp-int LTR/Gypsy (2724) 2338 1993 1925364 230 29.8 0.8 7.3 chr7 116878391 116878513 (42260150) C MamGypLTR1a LTR/Gypsy (19) 784 670 1925464 244 32.3 8.0 0.8 chr7 116878853 116878977 (42259686) C MamGypLTR1a LTR/Gypsy (638) 146 13 1925464 472 29.7 9.4 5.9 chr7 116900220 116900473 (42238190) + MamGypLTR3 LTR/Gypsy 487 749 (90) 1925493 792 29.9 6.2 11.3 chr7 117112320 117112752 (42025911) C MamGypLTR3 LTR/Gypsy (28) 811 401 1925785 400 26.3 4.4 0.0 chr7 117264116 117264229 (41874434) C MamGypLTR1d LTR/Gypsy (1) 812 694 1926004 324 34.7 4.0 3.4 chr7 117264488 117264663 (41874000) C MamGypLTR2c LTR/Gypsy (590) 478 302 1926005 250 23.8 5.2 8.7 chr7 117264757 117264871 (41873792) C MamGypLTR2c LTR/Gypsy (919) 149 39 1926005 339 26.3 9.3 1.4 chr7 117629185 117629323 (41509340) + MamGypLTR1b LTR/Gypsy 597 746 (36) 1926481 386 32.8 4.2 0.5 chr7 117708819 117709011 (41429652) + MamGypLTR2b LTR/Gypsy 723 922 (0) 1926594 325 32.3 14.5 1.7 chr7 118286927 118287170 (40851493) + MamGypLTR1a LTR/Gypsy 287 553 (231) 1927410 340 39.0 3.0 2.1 chr7 119399151 119399383 (39739280) C MamGypLTR2c LTR/Gypsy (500) 568 334 1928798 293 34.5 1.7 4.3 chr7 119463356 119463470 (39675193) C MamGypLTR1a LTR/Gypsy (240) 544 433 1928882 361 27.3 17.4 6.5 chr7 120076508 120076801 (39061862) C MamGypLTR1d LTR/Gypsy (0) 813 488 1929648 350 25.8 3.8 1.2 chr7 120818311 120818433 (38320230) + MamGypLTR2b LTR/Gypsy 680 922 (0) 1930635 319 28.9 1.2 1.2 chr7 121214480 121214563 (37924100) C MamGypLTR2c LTR/Gypsy (686) 382 299 1931174 334 27.6 15.1 2.3 chr7 121254508 121254726 (37883937) C MamGypLTR2b LTR/Gypsy (0) 922 676 1931237 281 22.7 4.1 1.4 chr7 121379221 121379341 (37759322) + LTR81AB LTR/Gypsy 11 172 (1017) 1931419 632 32.6 7.8 0.4 chr7 121392696 121392963 (37745700) C MamGypLTR3 LTR/Gypsy (3) 836 549 1931439 334 29.8 13.3 1.2 chr7 121393010 121393182 (37745481) C MamGypLTR3 LTR/Gypsy (376) 463 270 1931439 392 35.9 5.9 0.0 chr7 121468542 121468711 (37669952) + MamGyp-int LTR/Gypsy 3787 3966 (1096) 1931554 410 25.6 17.8 4.6 chr7 122128717 122128957 (37009706) + MamGypLTR2b LTR/Gypsy 647 919 (3) 1932444 490 32.1 4.2 4.8 chr7 122745489 122745819 (36392844) + MamGypLTR2b LTR/Gypsy 581 909 (13) 1933275 237 5.9 0.0 0.0 chr7 122888935 122888968 (36249695) C MamGypLTR1b LTR/Gypsy (743) 39 6 1933449 494 33.6 5.8 2.1 chr7 123013779 123014021 (36124642) + MamGypLTR1d LTR/Gypsy 547 798 (15) 1933615 367 26.9 0.9 0.9 chr7 123246131 123246235 (35892428) C LTR81C LTR/Gypsy (17) 1136 1032 1933954 304 23.9 3.4 0.0 chr7 123444115 123444202 (35694461) C LTR81 LTR/Gypsy (15) 1174 1084 1934268 287 26.7 12.2 0.0 chr7 124129548 124129637 (35009026) + MamGypLTR1b LTR/Gypsy 681 781 (1) 1935157 464 31.1 2.1 6.3 chr7 124442866 124443102 (34695561) C MamGypLTR1d LTR/Gypsy (581) 232 6 1935568 550 36.1 5.3 2.5 chr7 125037526 125037886 (34100777) + MamGypLTR1b LTR/Gypsy 408 778 (4) 1936346 320 31.0 0.8 0.8 chr7 125405631 125405747 (33732916) C MamGypLTR1c LTR/Gypsy (3) 800 684 1936847 225 34.2 5.8 5.5 chr7 125406071 125406327 (33732336) C MamGypLTR1c LTR/Gypsy (508) 274 17 1936847 252 20.9 5.9 1.5 chr7 125578102 125578169 (33560494) C MamGypLTR1b LTR/Gypsy (0) 782 712 1937081 353 25.7 12.1 3.7 chr7 126041449 126041638 (33097025) + LTR81B LTR/Gypsy 1 206 (1187) 1937675 552 24.6 7.4 3.7 chr7 126932318 126932532 (32206131) C MamGypLTR2b LTR/Gypsy (0) 922 700 1938771 371 34.0 9.4 6.8 chr7 126932600 126933012 (32205651) C MamGypLTR2b LTR/Gypsy (374) 548 125 1938771 291 26.4 19.5 2.3 chr7 126933320 126933447 (32205216) C MamGypLTR2b LTR/Gypsy (917) 151 2 1938771 252 32.5 6.9 2.5 chr7 126963349 126963547 (32175116) + MamGypLTR2c LTR/Gypsy 26 233 (835) 1938802 569 31.7 8.6 5.6 chr7 126979716 126980123 (32158540) C MamGypLTR1b LTR/Gypsy (9) 773 354 1938829 409 26.8 1.7 3.5 chr7 127052524 127052639 (32086024) C LTR81B LTR/Gypsy (1025) 368 255 1938938 275 25.0 4.4 2.2 chr7 127052714 127052803 (32085860) C LTR81B LTR/Gypsy (166) 112 21 1938938 608 29.2 3.4 7.4 chr7 128314661 128314866 (30823797) C MamGypLTR1b LTR/Gypsy (0) 782 586 1940915 608 29.2 3.4 7.4 chr7 128314998 128315115 (30823548) C MamGypLTR1b LTR/Gypsy (197) 585 471 1940915 247 29.1 1.1 1.1 chr7 130009620 130009706 (29128957) C MamGypLTR2c LTR/Gypsy (0) 1068 982 1944046 225 32.9 2.7 0.0 chr7 130009802 130009874 (29128789) + MamGypLTR2c LTR/Gypsy 401 475 (593) 1944047 663 30.5 0.8 4.1 chr7 130010085 130010351 (29128312) + MamGypLTR2c LTR/Gypsy 811 1068 (0) 1944047 924 32.7 10.4 7.3 chr7 130407306 130408556 (28730107) + LTR81A LTR/Gypsy 18 1306 (44) 1944480 382 26.6 1.7 11.2 chr7 132883235 132883412 (26255251) C MamGypLTR3 LTR/Gypsy (8) 831 671 1948352 321 26.5 3.2 4.9 chr7 133758380 133758502 (25380161) C MamGypLTR1b LTR/Gypsy (17) 765 645 1949640 240 34.9 3.3 3.3 chr7 133968222 133968402 (25170261) + MamGypLTR1b LTR/Gypsy 596 776 (6) 1949965 706 22.4 4.2 6.9 chr7 134109536 134109823 (25028840) + LTR81B LTR/Gypsy 1 280 (1113) 1950189 241 20.0 8.3 0.0 chr7 135013322 135013381 (24125282) + MamGypLTR1a LTR/Gypsy 714 778 (6) 1951424 266 20.5 2.5 2.5 chr7 135014534 135014613 (24124050) + MamGypLTR1d LTR/Gypsy 1 80 (733) 1951426 311 27.8 6.2 0.0 chr7 135441954 135442050 (23696613) + MamGypLTR3 LTR/Gypsy 263 365 (474) 1952184 228 27.1 6.7 1.7 chr7 136210984 136211043 (22927620) + MamGypLTR2b LTR/Gypsy 118 180 (742) 1953334 243 30.4 3.7 3.7 chr7 136211217 136211298 (22927365) + MamGypLTR1c LTR/Gypsy 483 564 (239) 1953335 301 37.4 8.0 1.3 chr7 136431286 136431510 (22707153) C MamGypLTR1b LTR/Gypsy (35) 747 508 1953610 231 34.2 6.0 3.4 chr7 136431691 136431923 (22706740) C MamGypLTR1b LTR/Gypsy (539) 245 7 1953610 397 33.0 4.7 4.2 chr7 136762816 136763005 (22375658) + MamGypLTR2c LTR/Gypsy 249 439 (629) 1954069 521 31.6 12.0 4.1 chr7 139200849 139200898 (19937765) + MamGypLTR1a LTR/Gypsy 2 49 (735) 1958246 521 31.6 12.0 4.1 chr7 139201154 139201568 (19937095) + MamGypLTR1a LTR/Gypsy 50 504 (280) 1958246 248 22.0 13.2 5.7 chr7 139639901 139640006 (19498657) + LTR81B LTR/Gypsy 213 326 (1067) 1958885 249 27.5 7.4 12.1 chr7 139738992 139739140 (19399523) + LTR81C LTR/Gypsy 122 263 (890) 1959046 700 25.4 1.4 4.5 chr7 141216869 141217142 (17921521) + LTR81C LTR/Gypsy 45 311 (1039) 1961766 580 33.4 8.9 0.3 chr7 141217384 141217686 (17920977) + LTR81C LTR/Gypsy 350 678 (475) 1961766 795 25.7 6.0 2.8 chr7 141219421 141219718 (17918945) + LTR81C LTR/Gypsy 866 1320 (30) 1961766 910 29.5 3.2 6.8 chr7 141230108 141230507 (17908156) C MamGypLTR3 LTR/Gypsy (9) 830 445 1961790 348 24.8 0.9 4.4 chr7 141466454 141466567 (17672096) + LTR81B LTR/Gypsy 1282 1391 (2) 1962133 477 33.9 3.7 1.2 chr7 141846152 141846393 (17292270) C MamGypLTR1d LTR/Gypsy (0) 813 566 1962627 339 34.4 15.1 4.8 chr7 142513733 142513827 (16624836) + MamGypLTR2b LTR/Gypsy 181 286 (636) 1963235 339 33.2 11.2 7.1 chr7 142514343 142514877 (16623786) + MamGypLTR2b LTR/Gypsy 287 799 (4) 1963235 405 26.2 5.0 7.7 chr7 143193947 143194128 (15944535) C LTR81A LTR/Gypsy (46) 1304 1128 1964164 270 28.3 10.4 3.0 chr7 143194947 143195110 (15943553) C LTR81A LTR/Gypsy (905) 445 270 1964164 257 31.4 5.5 3.1 chr7 143603640 143603767 (15534896) + MamGypLTR1d LTR/Gypsy 650 809 (4) 1964598 228 30.1 0.0 10.2 chr7 143776988 143777124 (15361539) C LTR81A LTR/Gypsy (1119) 231 109 1964831 276 28.3 0.0 8.9 chr7 144129268 144129312 (15009351) C MamGypLTR1a LTR/Gypsy (9) 775 735 1965319 276 28.3 0.0 8.9 chr7 144129603 144129680 (15008983) C MamGypLTR1a LTR/Gypsy (50) 734 663 1965319 274 27.6 1.3 0.0 chr7 144132756 144132831 (15005832) + MamGypLTR1b LTR/Gypsy 639 715 (67) 1965323 226 28.2 1.3 1.3 chr7 144722033 144722111 (14416552) C LTR81A LTR/Gypsy (1097) 253 175 1966183 267 26.9 2.4 15.1 chr7 144844894 144845059 (14293604) C LTR81B LTR/Gypsy (216) 1177 1033 1966345 492 29.6 5.3 4.3 chr7 145118857 145119064 (14019599) + MamGypLTR1c LTR/Gypsy 51 260 (543) 1966719 308 33.5 9.6 7.5 chr7 145119490 145119824 (14018839) + MamGypLTR1c LTR/Gypsy 460 801 (2) 1966719 254 29.5 13.3 0.0 chr7 146138282 146138386 (13000277) C MamGypLTR1d LTR/Gypsy (0) 813 695 1968084 484 37.5 9.1 3.9 chr7 146367744 146368328 (12770335) C MamGypLTR3 LTR/Gypsy (95) 744 130 1968380 269 33.1 2.7 2.0 chr7 146599682 146599829 (12538834) C MamGypLTR2c LTR/Gypsy (46) 1022 874 1968719 387 27.8 3.2 4.1 chr7 146602514 146602731 (12535932) C LTR81A LTR/Gypsy (974) 376 161 1968725 357 26.2 5.1 5.7 chr7 147143729 147143886 (11994777) + LTR81B LTR/Gypsy 1200 1356 (37) 1969446 628 26.9 1.5 10.2 chr7 147232721 147233055 (11905608) + LTR81A LTR/Gypsy 1 306 (1044) 1969580 241 26.3 5.7 4.1 chr7 147652123 147652245 (11486418) + MamGypLTR1a LTR/Gypsy 653 777 (7) 1970154 289 32.0 17.1 3.9 chr7 147973961 147974194 (11164469) C LTR81B LTR/Gypsy (32) 1361 1097 1970658 358 27.3 1.8 2.6 chr7 147976737 147976849 (11161814) C LTR81B LTR/Gypsy (1281) 112 1 1970663 303 26.4 4.7 8.4 chr7 148058208 148058397 (11080266) C LTR81A LTR/Gypsy (58) 1292 1110 1970781 607 26.0 13.0 14.8 chr7 148338626 148339379 (10799284) + MamGypLTR1c LTR/Gypsy 54 793 (10) 1971281 286 32.0 13.4 2.2 chr7 148691809 148692032 (10446631) C MamGypLTR3 LTR/Gypsy (408) 431 183 1971919 405 28.3 8.7 4.1 chr7 149098133 149098327 (10040336) C MamGypLTR1c LTR/Gypsy (13) 790 587 1972725 247 33.5 9.5 6.4 chr7 150139029 150139481 (8999182) C MamGypLTR1c LTR/Gypsy (265) 538 72 1974152 322 24.6 2.6 8.4 chr7 150183056 150183210 (8955453) + LTR81B LTR/Gypsy 78 223 (1170) 1974207 275 18.8 23.2 0.0 chr7 150484958 150485026 (8653637) + MamGypLTR1a LTR/Gypsy 120 204 (580) 1974537 309 28.5 16.7 3.1 chr7 151529004 151529271 (7609392) + MamGypLTR1a LTR/Gypsy 364 688 (96) 1976088 586 21.5 6.2 0.7 chr7 151537026 151537170 (7601493) + MamGypLTR3 LTR/Gypsy 675 827 (12) 1976099 310 21.7 16.0 8.0 chr7 151614211 151614249 (7524414) + MamGypLTR1c LTR/Gypsy 55 91 (712) 1976232 310 21.7 16.0 8.0 chr7 151614541 151614625 (7524038) + MamGypLTR1c LTR/Gypsy 92 189 (614) 1976232 414 34.1 5.9 5.9 chr7 152148750 152149036 (6989627) + MamGypLTR2b LTR/Gypsy 1 287 (635) 1977132 415 25.1 6.7 7.0 chr7 152149187 152149465 (6989198) + MamGypLTR2b LTR/Gypsy 696 1010 (58) 1977132 255 33.9 4.7 6.6 chr7 152917688 152917804 (6220859) + MamGyp-int LTR/Gypsy 85 202 (4860) 1978597 255 33.9 4.7 6.6 chr7 152918242 152918379 (6220284) + MamGyp-int LTR/Gypsy 203 335 (4727) 1978597 415 29.6 4.8 3.0 chr7 152997818 152997984 (6140679) + MamGypLTR1c LTR/Gypsy 599 768 (35) 1978699 809 31.1 10.7 4.1 chr7 153875867 153876379 (5262284) + MamGypLTR1a LTR/Gypsy 220 766 (18) 1979856 460 23.5 16.7 3.6 chr7 154643129 154643349 (4495314) C LTR81B LTR/Gypsy (13) 1380 1131 1980719 239 31.2 12.1 3.5 chr7 154644775 154645030 (4493633) C LTR81AB LTR/Gypsy (0) 278 1 1980723 264 15.2 2.2 0.0 chr7 154825936 154825981 (4312682) + MamGypLTR1d LTR/Gypsy 767 813 (0) 1980951 424 32.4 6.6 6.3 chr7 156194694 156195135 (2943528) C LTR81A LTR/Gypsy (314) 875 433 1982666 538 27.1 11.4 1.7 chr7 156195331 156195566 (2943097) C LTR81A LTR/Gypsy (1006) 344 86 1982666 259 37.8 1.5 0.7 chr7 157730018 157730153 (1408510) + MamGypLTR3 LTR/Gypsy 702 838 (1) 1984620 229 30.7 8.9 0.0 chr7 158900623 158900723 (237940) + MamGypLTR1c LTR/Gypsy 680 789 (14) 1985906 294 22.1 1.5 0.0 chrX 1625187 1625254 (153645306) + LTR81AB LTR/Gypsy 43 111 (167) 1989153 289 29.6 1.6 3.1 chrX 2203998 2204126 (153066434) C MamGypLTR1a LTR/Gypsy (3) 781 655 1990500 258 28.3 1.6 3.2 chrX 2204173 2204296 (153066264) C MamGypLTR1b LTR/Gypsy (10) 772 651 1990501 280 26.4 10.0 0.0 chrX 2204341 2204450 (153066110) C MamGypLTR1b LTR/Gypsy (10) 772 652 1990502 286 22.0 9.5 4.8 chrX 2512978 2513082 (152757478) + MamGypLTR1a LTR/Gypsy 620 729 (55) 1991157 286 33.9 3.9 3.9 chrX 5321762 5321939 (149948621) + LTR81B LTR/Gypsy 1206 1383 (10) 1996535 452 14.8 3.3 2.2 chrX 6430602 6430691 (148839869) + LTR81B LTR/Gypsy 149 239 (1154) 1998366 243 22.1 10.9 5.5 chrX 6921660 6921769 (148348791) C MamGypLTR1c LTR/Gypsy (615) 188 73 1999196 322 14.6 10.0 14.2 chrX 7304414 7304533 (147966027) C MamGypLTR2c LTR/Gypsy (92) 976 862 1999723 429 29.1 9.6 1.5 chrX 7709160 7709330 (147561230) + LTR81C LTR/Gypsy 113 290 (863) 2000224 572 34.2 11.1 1.1 chrX 7709535 7709983 (147560577) + LTR81C LTR/Gypsy 528 1021 (132) 2000224 232 21.3 2.6 3.9 chrX 7710170 7710247 (147560313) + LTR81C LTR/Gypsy 1104 1180 (9) 2000224 229 19.3 5.3 0.0 chrX 7906505 7906561 (147363999) + LTR81A LTR/Gypsy 331 390 (960) 2000508 246 31.2 14.0 0.5 chrX 7906999 7907220 (147363340) + LTR81A LTR/Gypsy 724 975 (375) 2000510 287 28.2 4.5 0.0 chrX 7985567 7985676 (147284884) C LTR81A LTR/Gypsy (169) 1181 1067 2000617 231 32.8 9.2 0.0 chrX 8166118 8166248 (147104312) C MamGypLTR1a LTR/Gypsy (127) 657 515 2000904 321 30.1 6.8 1.7 chrX 8166377 8166552 (147104008) C MamGypLTR1a LTR/Gypsy (599) 185 1 2000904 371 32.5 8.2 0.5 chrX 8450727 8450921 (146819639) C MamGypLTR2c LTR/Gypsy (840) 228 19 2001329 241 29.5 0.0 3.7 chrX 10864739 10864819 (144405741) + MamGypLTR2c LTR/Gypsy 2 79 (989) 2005064 358 30.6 10.1 2.4 chrX 10865293 10865540 (144405020) + MamGypLTR2c LTR/Gypsy 802 1068 (0) 2005064 923 29.8 2.8 2.0 chrX 11195503 11195858 (144074702) + MamGypLTR3 LTR/Gypsy 481 839 (0) 2005550 450 25.2 5.1 5.7 chrX 11847727 11847921 (143422639) C LTR81B LTR/Gypsy (1141) 209 15 2006551 319 34.8 10.8 5.5 chrX 12191648 12192192 (143078368) C MamGypLTR1a LTR/Gypsy (32) 752 177 2007038 259 29.7 5.3 2.6 chrX 12272063 12272176 (142998384) + MamGypLTR1d LTR/Gypsy 658 774 (39) 2007172 262 23.8 1.1 6.7 chrX 12620038 12620127 (142650433) C MamGypLTR1d LTR/Gypsy (622) 191 107 2007682 336 24.5 1.9 2.9 chrX 12646242 12646346 (142624214) C MamGypLTR1c LTR/Gypsy (0) 803 700 2007728 472 30.0 8.1 2.5 chrX 12651496 12651731 (142618829) + MamGypLTR1b LTR/Gypsy 497 745 (37) 2007737 417 24.4 5.9 3.0 chrX 12900808 12900976 (142369584) C MamGypLTR2b LTR/Gypsy (45) 877 704 2008135 357 24.9 14.2 6.9 chrX 12917702 12917947 (142352613) + MamGypLTR1d LTR/Gypsy 55 318 (495) 2008160 275 29.0 8.7 2.7 chrX 13434633 13434781 (141835779) + MamGypLTR1b LTR/Gypsy 1 158 (624) 2008945 226 24.5 7.5 0.0 chrX 13534225 13534277 (141736283) C MamGypLTR3 LTR/Gypsy (614) 225 169 2009123 233 17.0 3.6 5.4 chrX 13534805 13534860 (141735700) C LTR81 LTR/Gypsy (961) 228 174 2009124 422 32.8 6.9 5.2 chrX 13536668 13537014 (141733546) + MamGypLTR2b LTR/Gypsy 24 376 (546) 2009126 785 33.5 8.0 5.0 chrX 13647772 13648195 (141622365) C MamGypLTR1b LTR/Gypsy (0) 782 346 2009320 438 31.6 3.2 1.6 chrX 13648282 13648471 (141622089) C MamGypLTR1b LTR/Gypsy (582) 200 8 2009320 288 29.3 3.0 1.0 chrX 14005349 14005448 (141265112) C MamGypLTR2b LTR/Gypsy (1) 921 820 2009880 232 25.0 5.3 2.1 chrX 14058417 14058510 (141212050) + MamGypLTR3 LTR/Gypsy 661 757 (82) 2009964 548 28.4 9.5 3.2 chrX 14252427 14252710 (141017850) C LTR81C LTR/Gypsy (851) 302 1 2010226 392 27.3 9.7 0.7 chrX 15140068 15140211 (140130349) C LTR81C LTR/Gypsy (9) 1144 988 2011532 347 29.0 12.1 2.2 chrX 15140811 15140980 (140129580) C LTR81C LTR/Gypsy (892) 297 109 2011532 1163 30.5 8.6 6.9 chrX 15255843 15256539 (140014021) + MamGypLTR1b LTR/Gypsy 74 782 (0) 2011728 386 29.4 3.5 1.4 chrX 15647037 15647181 (139623379) + MamGypLTR1a LTR/Gypsy 116 263 (521) 2012363 377 27.8 5.2 2.6 chrX 16148591 16148806 (139121754) C MamGypLTR3 LTR/Gypsy (592) 247 73 2013205 554 35.9 0.7 5.5 chrX 16214874 16215162 (139055398) C MamGypLTR1d LTR/Gypsy (3) 810 536 2013294 297 26.3 6.6 0.0 chrX 16215300 16215375 (139055185) C MamGypLTR1d LTR/Gypsy (497) 316 236 2013295 338 25.0 15.7 4.7 chrX 16215456 16215627 (139054933) C MamGypLTR1d LTR/Gypsy (614) 199 9 2013295 441 27.5 13.1 8.6 chrX 16320023 16320464 (138950096) C MamGypLTR1c LTR/Gypsy (324) 479 18 2013433 244 30.5 2.0 4.0 chrX 16347748 16347846 (138922714) + MamGypLTR1c LTR/Gypsy 338 434 (369) 2013475 579 29.6 11.4 2.0 chrX 16542510 16542754 (138727806) C MamGypLTR1a LTR/Gypsy (3) 781 514 2013784 346 20.5 9.2 6.2 chrX 16934204 16934328 (138336232) + LTR81A LTR/Gypsy 51 182 (1211) 2014581 331 32.8 5.7 2.9 chrX 17214265 17214457 (138056103) + LTR81AB LTR/Gypsy 98 294 (1056) 2015027 297 33.7 13.2 6.7 chrX 17214826 17215484 (138055076) + LTR81AB LTR/Gypsy 295 1005 (345) 2015027 1133 30.1 10.3 4.5 chrX 17943372 17944040 (137326520) C MamGypLTR1c LTR/Gypsy (0) 803 96 2016120 404 33.9 1.1 1.7 chrX 18130794 18130967 (137139593) C MamGypLTR1b LTR/Gypsy (0) 782 610 2016442 486 28.8 8.8 1.8 chrX 18142065 18142234 (137128326) + LTR81A LTR/Gypsy 37 218 (1132) 2016464 406 11.7 28.9 1.0 chrX 18180337 18180440 (137090120) + MamGypLTR1d LTR/Gypsy 666 808 (5) 2016530 449 26.0 4.5 7.1 chrX 18555059 18555282 (136715278) C LTR81C LTR/Gypsy (0) 1153 936 2017255 387 32.4 11.4 4.1 chrX 18567606 18567824 (136702736) + LTR81C LTR/Gypsy 3 237 (916) 2017273 541 24.0 19.4 5.7 chrX 18568314 18568650 (136701910) + LTR81C LTR/Gypsy 822 1194 (199) 2017273 257 33.3 1.9 1.0 chrX 18805651 18805753 (136464807) + MamGypLTR1b LTR/Gypsy 447 550 (232) 2017650 605 27.6 5.4 5.8 chrX 18805915 18806137 (136464423) + MamGypLTR1b LTR/Gypsy 540 761 (21) 2017650 395 28.6 11.7 9.1 chrX 19079757 19080021 (136190539) C LTR81C LTR/Gypsy (93) 1060 789 2018132 380 30.0 1.0 1.8 chrX 19336584 19336716 (135933844) + MamGypLTR1b LTR/Gypsy 327 444 (359) 2018579 347 33.8 5.0 10.7 chrX 20464963 20465080 (134805480) + MamGypLTR2b LTR/Gypsy 40 136 (786) 2020551 347 33.8 5.0 10.7 chrX 20465287 20465531 (134805029) + MamGypLTR2b LTR/Gypsy 137 382 (540) 2020551 351 28.9 9.4 0.6 chrX 20482685 20482844 (134787716) + MamGypLTR1c LTR/Gypsy 630 803 (0) 2020583 270 28.2 7.5 4.8 chrX 20650251 20650400 (134620160) C MamGypLTR1c LTR/Gypsy (620) 193 35 2020844 378 27.9 8.2 2.9 chrX 20661943 20662149 (134608411) + MamGypLTR1d LTR/Gypsy 596 813 (0) 2020866 352 28.8 18.8 2.2 chrX 21212365 21212545 (134058015) C MamGypLTR2b LTR/Gypsy (16) 1052 752 2021550 479 25.0 0.0 1.6 chrX 21328466 21328587 (133941973) C MamGypLTR2c LTR/Gypsy (19) 1049 930 2021678 242 24.1 0.0 1.7 chrX 21923001 21923059 (133347501) C LTR81A LTR/Gypsy (1) 1349 1292 2022475 1004 25.1 4.8 2.1 chrX 21923094 21923382 (133347178) C LTR81B LTR/Gypsy (46) 1347 1051 2022477 836 20.3 7.2 6.5 chrX 21923617 21923879 (133346681) C LTR81B LTR/Gypsy (1110) 283 17 2022477 424 25.4 13.1 6.6 chrX 21933541 21933738 (133336822) C MamGypLTR1b LTR/Gypsy (570) 212 2 2022497 310 25.8 9.1 0.7 chrX 22099155 22099296 (133171264) C MamGypLTR1c LTR/Gypsy (1) 812 657 2022792 368 32.5 8.0 2.7 chrX 22963968 22964267 (132306293) + MamGypLTR3 LTR/Gypsy 479 794 (45) 2024046 363 23.7 3.2 0.0 chrX 23220376 23220468 (132050092) C MamGypLTR1b LTR/Gypsy (8) 774 679 2024447 376 30.2 2.4 0.0 chrX 24474504 24474629 (130795931) C MamGypLTR1a LTR/Gypsy (14) 770 642 2026713 230 10.0 0.0 2.4 chrX 24475763 24475803 (130794757) C MamGypLTR1b LTR/Gypsy (742) 40 1 2026716 245 24.7 4.8 15.5 chrX 24603032 24603237 (130667323) + MamGypLTR2c LTR/Gypsy 3 186 (882) 2026929 236 29.3 26.2 1.6 chrX 24603766 24603956 (130666604) + MamGypLTR2c LTR/Gypsy 769 1006 (62) 2026929 378 29.7 20.0 5.0 chrX 24613212 24613714 (130656846) + MamGypLTR1b LTR/Gypsy 44 651 (131) 2026949 378 31.6 15.2 5.0 chrX 24614018 24614134 (130656426) + MamGypLTR1b LTR/Gypsy 652 782 (0) 2026949 742 26.5 13.3 1.2 chrX 24640812 24641067 (130629493) + MamGypLTR3 LTR/Gypsy 542 828 (11) 2027007 314 26.9 3.6 6.5 chrX 25521613 25521751 (129748809) + MamGypLTR3 LTR/Gypsy 660 794 (45) 2028288 515 27.9 14.7 0.5 chrX 25648792 25648989 (129621571) C MamGypLTR2b LTR/Gypsy (36) 886 661 2028464 345 29.8 16.3 4.8 chrX 25721375 25721601 (129548959) C MamGypLTR2c LTR/Gypsy (16) 1052 789 2028559 345 29.8 16.3 4.8 chrX 25722133 25722193 (129548367) C MamGypLTR2c LTR/Gypsy (280) 788 731 2028559 274 27.8 18.0 3.0 chrX 25732895 25733061 (129537499) + MamGypLTR1c LTR/Gypsy 8 199 (604) 2028570 278 26.1 13.6 5.5 chrX 26097782 26097980 (129172580) C LTR81A LTR/Gypsy (1127) 223 9 2029032 1026 30.9 9.7 7.5 chrX 26599584 26600387 (128670173) + LTR81B LTR/Gypsy 35 856 (537) 2029684 709 35.1 4.1 2.8 chrX 26875500 26875935 (128394625) C MamGyp-int LTR/Gypsy (516) 4546 4105 2030064 1041 35.6 11.1 5.1 chrX 27011984 27012134 (128258426) C MamGyp-int LTR/Gypsy (1344) 3718 3579 2030271 1041 35.6 11.1 5.1 chrX 27012463 27013333 (128257227) C MamGyp-int LTR/Gypsy (1484) 3578 2635 2030271 262 22.9 4.4 4.4 chrX 27469311 27469424 (127801136) C MamGypLTR2b LTR/Gypsy (31) 891 778 2030994 280 30.7 3.5 1.7 chrX 27747986 27748101 (127522459) + MamGypLTR3 LTR/Gypsy 360 477 (362) 2031419 274 33.1 2.6 0.7 chrX 27794370 27794524 (127476036) C MamGypLTR1c LTR/Gypsy (32) 771 614 2031482 527 31.5 8.4 3.4 chrX 28130188 28130483 (127140077) + MamGypLTR1a LTR/Gypsy 460 770 (14) 2031922 249 28.3 10.7 0.8 chrX 28132903 28133023 (127137537) + MamGypLTR1a LTR/Gypsy 1 133 (651) 2031925 303 27.4 7.1 0.0 chrX 28133249 28133332 (127137228) + MamGypLTR1a LTR/Gypsy 463 552 (232) 2031925 265 31.1 1.3 1.3 chrX 29090638 29090712 (126179848) C LTR81C LTR/Gypsy (248) 905 831 2033341 274 21.0 0.0 3.1 chrX 29743229 29743292 (125527268) C LTR81C LTR/Gypsy (43) 1110 1049 2034386 737 29.9 8.5 4.9 chrX 29962584 29962970 (125307590) C MamGypLTR2c LTR/Gypsy (27) 1041 641 2034704 498 33.9 7.5 4.5 chrX 29963087 29963420 (125307140) C MamGypLTR2c LTR/Gypsy (620) 448 105 2034704 234 29.4 15.4 5.2 chrX 30080858 30081090 (125189470) C MamGypLTR2c LTR/Gypsy (0) 922 666 2034851 238 30.2 2.3 4.5 chrX 30082643 30082774 (125187786) C MamGypLTR2c LTR/Gypsy (826) 242 114 2034851 270 33.8 2.4 6.5 chrX 30128602 30128769 (125141791) C MamGypLTR2c LTR/Gypsy (731) 337 177 2034918 235 27.0 18.0 0.0 chrX 30170570 30170658 (125099902) + MamGypLTR1b LTR/Gypsy 8 112 (672) 2034979 289 31.2 17.6 0.7 chrX 30170868 30171009 (125099551) + MamGypLTR1b LTR/Gypsy 373 538 (244) 2034979 271 27.8 3.6 1.8 chrX 30171001 30171110 (125099450) + MamGypLTR1b LTR/Gypsy 673 784 (0) 2034979 679 32.1 7.5 3.6 chrX 30301760 30302199 (124968361) + MamGypLTR1a LTR/Gypsy 48 504 (280) 2035152 455 26.1 2.0 4.7 chrX 30302208 30302356 (124968204) + MamGypLTR1a LTR/Gypsy 638 782 (0) 2035152 286 27.1 0.5 0.0 chrX 30303824 30303909 (124966651) + MamGypLTR1a LTR/Gypsy 405 511 (302) 2035155 534 28.0 4.0 0.6 chrX 30303946 30304121 (124966439) + MamGypLTR1a LTR/Gypsy 603 784 (0) 2035155 567 32.3 4.4 9.4 chrX 30572473 30572906 (124697654) C MamGypLTR1d LTR/Gypsy (75) 738 327 2035562 447 23.7 10.0 5.7 chrX 30922717 30922850 (124347710) + MamGypLTR1b LTR/Gypsy 1 136 (646) 2036117 447 23.7 10.0 5.7 chrX 30922985 30923059 (124347501) + MamGypLTR1b LTR/Gypsy 137 219 (563) 2036117 394 29.1 9.4 0.7 chrX 30925294 30925442 (124345118) + MamGypLTR1c LTR/Gypsy 612 773 (30) 2036123 760 31.4 6.0 3.9 chrX 30940688 30941154 (124329406) + MamGypLTR2c LTR/Gypsy 60 536 (532) 2036145 572 27.2 10.2 1.5 chrX 30941522 30941726 (124328834) + MamGypLTR2c LTR/Gypsy 805 1027 (41) 2036145 286 33.9 3.1 0.8 chrX 30957864 30957991 (124312569) C MamGypLTR1c LTR/Gypsy (670) 133 3 2036183 389 24.9 7.8 4.6 chrX 31877205 31877431 (123393129) + LTR81A LTR/Gypsy 746 1161 (232) 2037569 273 27.7 0.0 6.0 chrX 32058662 32058761 (123211799) + MamGypLTR2b LTR/Gypsy 13 106 (816) 2037832 317 35.5 4.8 3.4 chrX 32855156 32855301 (122415259) + MamGypLTR1b LTR/Gypsy 343 490 (292) 2038877 314 35.5 8.4 2.6 chrX 32889915 32890105 (122380455) + MamGypLTR2c LTR/Gypsy 297 498 (570) 2038921 441 31.7 8.3 6.1 chrX 33032400 33032725 (122237835) + MamGypLTR1b LTR/Gypsy 440 772 (10) 2039151 376 25.7 8.6 5.1 chrX 33064287 33064483 (122206077) + MamGypLTR2b LTR/Gypsy 719 922 (0) 2039195 234 24.1 13.8 0.9 chrX 33398630 33398738 (121871822) + MamGypLTR2b LTR/Gypsy 779 901 (21) 2039682 273 37.2 3.4 4.3 chrX 33877525 33877757 (121392803) C MamGyp-int LTR/Gypsy (417) 4645 4415 2040220 261 35.9 1.2 4.3 chrX 34036306 34036468 (121234092) + LTR81 LTR/Gypsy 807 964 (225) 2040424 239 38.9 8.6 0.0 chrX 34319912 34320050 (120950510) C MamGypLTR1a LTR/Gypsy (106) 678 528 2040774 228 17.6 4.2 4.2 chrX 34320718 34320788 (120949772) C MamGypLTR1a LTR/Gypsy (713) 71 1 2040776 353 31.3 5.1 3.4 chrX 34333395 34333658 (120936902) C MamGypLTR1b LTR/Gypsy (519) 265 1 2040797 356 32.2 0.0 1.7 chrX 34689458 34689577 (120580983) + MamGypLTR3 LTR/Gypsy 714 831 (8) 2041257 320 27.0 0.9 3.5 chrX 34717010 34717118 (120553442) + MamGypLTR1d LTR/Gypsy 706 811 (2) 2041302 324 34.3 0.5 3.3 chrX 35308567 35308750 (119961810) C MamGypLTR2c LTR/Gypsy (79) 989 811 2042015 320 28.8 0.0 3.3 chrX 35570378 35570499 (119700061) + LTR81C LTR/Gypsy 913 1030 (123) 2042365 267 32.1 4.1 12.8 chrX 36056038 36056380 (119214180) C MamGypLTR3 LTR/Gypsy (58) 781 469 2043037 438 29.7 4.3 9.2 chrX 36104529 36104832 (119165728) + LTR81A LTR/Gypsy 1 289 (1061) 2043100 345 25.9 2.7 2.7 chrX 36330849 36330959 (118939601) C LTR81A LTR/Gypsy (138) 1212 1102 2043380 371 27.7 0.9 1.8 chrX 36548069 36548182 (118722378) + MamGypLTR2c LTR/Gypsy 814 926 (142) 2043663 334 35.0 6.7 7.0 chrX 36966787 36967102 (118303458) C MamGypLTR3 LTR/Gypsy (25) 814 500 2044163 424 32.5 3.4 5.0 chrX 37597341 37597661 (117672899) C LTR81C LTR/Gypsy (1) 1152 837 2044962 264 29.3 2.9 2.9 chrX 37598232 37598368 (117672192) C LTR81C LTR/Gypsy (997) 396 260 2044962 421 31.3 16.3 3.6 chrX 37680425 37680785 (117589775) + MamGypLTR1d LTR/Gypsy 404 810 (3) 2045085 227 27.1 5.9 7.8 chrX 38230542 38230745 (117039815) C LTR81B LTR/Gypsy (1185) 208 9 2045943 787 25.8 8.4 6.0 chrX 38768168 38768501 (116502059) + MamGypLTR2b LTR/Gypsy 573 914 (8) 2046757 276 17.1 4.0 6.7 chrX 38768634 38768708 (116501852) C MamGypLTR2c LTR/Gypsy (8) 1060 988 2046758 427 26.9 13.3 4.6 chrX 39055280 39055371 (116215189) C LTR81B LTR/Gypsy (130) 1263 1154 2047171 427 26.9 13.3 4.6 chrX 39055787 39055888 (116214672) C LTR81B LTR/Gypsy (240) 1153 1052 2047171 307 34.0 9.6 6.3 chrX 39070029 39070298 (116200262) C MamGypLTR1b LTR/Gypsy (8) 774 496 2047197 356 19.5 7.0 9.1 chrX 39072675 39072814 (116197746) C MamGypLTR1b LTR/Gypsy (673) 140 1 2047202 233 22.6 0.0 1.9 chrX 39249125 39249178 (116021382) C LTR81C LTR/Gypsy (1043) 110 58 2047467 260 20.6 7.9 4.0 chrX 39459138 39459213 (115811347) C MamGypLTR3 LTR/Gypsy (164) 675 597 2047819 286 20.0 7.4 1.2 chrX 39478659 39478739 (115791821) + MamGypLTR1d LTR/Gypsy 1 86 (727) 2047848 464 29.6 19.3 4.8 chrX 39496149 39496521 (115774039) + MamGypLTR2c LTR/Gypsy 98 524 (544) 2047873 237 30.4 7.2 3.3 chrX 39496848 39497000 (115773560) + MamGypLTR2c LTR/Gypsy 903 1061 (7) 2047873 550 26.0 24.2 3.7 chrX 39616391 39616656 (115653904) C LTR81 LTR/Gypsy (10) 1179 858 2048086 550 26.0 24.2 3.7 chrX 39616824 39616932 (115653628) C LTR81 LTR/Gypsy (332) 857 727 2048086 385 26.3 5.0 1.4 chrX 39617420 39617558 (115653002) C LTR81 LTR/Gypsy (3) 275 132 2048086 805 30.5 13.5 8.5 chrX 39734662 39735611 (115534949) + MamGypLTR2c LTR/Gypsy 71 1067 (1) 2048315 376 28.4 3.7 8.8 chrX 39845689 39845904 (115424656) + MamGypLTR1b LTR/Gypsy 4 208 (574) 2048517 755 25.7 13.9 3.6 chrX 40060177 40060479 (115210081) C MamGypLTR2c LTR/Gypsy (3) 1065 732 2048853 231 23.3 6.8 1.4 chrX 41248448 41248521 (114022039) + LTR81B LTR/Gypsy 32 109 (1241) 2051103 376 38.6 4.7 1.7 chrX 41248519 41248750 (114021810) + LTR81B LTR/Gypsy 224 462 (931) 2051103 300 21.1 2.5 3.8 chrX 41812828 41812906 (113457654) C MamGypLTR1c LTR/Gypsy (0) 813 736 2052076 1210 25.1 11.0 0.6 chrX 41813067 41813383 (113457177) C MamGypLTR1c LTR/Gypsy (400) 403 54 2052076 453 21.5 2.2 5.3 chrX 41893845 41894004 (113376556) C MamGypLTR1a LTR/Gypsy (14) 789 634 2052180 241 30.3 4.9 9.3 chrX 41894296 41894499 (113376061) C MamGypLTR1b LTR/Gypsy (575) 207 13 2052181 334 30.7 7.5 5.6 chrX 41902265 41902530 (113368030) C MamGypLTR1d LTR/Gypsy (478) 335 65 2052194 388 22.3 7.8 5.5 chrX 42060040 42060167 (113210393) + MamGypLTR1b LTR/Gypsy 1 131 (651) 2052412 421 31.5 12.8 4.3 chrX 42060801 42061192 (113209368) + MamGypLTR1b LTR/Gypsy 358 782 (0) 2052415 788 34.1 7.2 6.0 chrX 42217309 42217368 (113053192) C MamGypLTR3 LTR/Gypsy (0) 839 780 2052615 788 34.1 7.2 6.0 chrX 42217964 42218613 (113051947) C MamGypLTR3 LTR/Gypsy (60) 779 121 2052615 296 29.9 10.7 5.2 chrX 42355054 42355342 (112915218) + LTR81B LTR/Gypsy 174 478 (915) 2052806 265 31.5 3.4 2.0 chrX 43373348 43373493 (111897067) + MamGypLTR1b LTR/Gypsy 635 782 (0) 2054148 264 20.6 10.3 9.7 chrX 43859241 43859385 (111411175) + LTR81A LTR/Gypsy 38 183 (1167) 2054843 248 22.7 9.5 7.6 chrX 43859409 43859513 (111411047) + MamGypLTR2c LTR/Gypsy 4 110 (958) 2054844 340 25.4 4.6 3.1 chrX 43932573 43932702 (111337858) + MamGypLTR1d LTR/Gypsy 1 132 (681) 2054939 332 23.5 8.4 14.5 chrX 44049525 44049703 (111220857) + MamGypLTR3 LTR/Gypsy 633 800 (39) 2055137 276 21.4 17.9 0.0 chrX 45089357 45089440 (110181120) C MamGypLTR1c LTR/Gypsy (0) 803 705 2057159 334 30.5 0.6 6.2 chrX 45089807 45089967 (110180593) C MamGypLTR1c LTR/Gypsy (651) 152 1 2057160 542 32.6 7.1 3.4 chrX 46429132 46429462 (108841098) C MamGypLTR1c LTR/Gypsy (221) 563 231 2058998 368 23.0 5.7 13.6 chrX 46431048 46431143 (108839417) C MamGypLTR1c LTR/Gypsy (634) 169 71 2058998 368 23.0 5.7 13.6 chrX 46431431 46431509 (108839051) C MamGypLTR1c LTR/Gypsy (733) 70 8 2058998 309 32.4 9.1 2.8 chrX 47541546 47541688 (107728872) C MamGyp-int LTR/Gypsy (3396) 1666 1515 2061145 1129 29.4 13.8 2.6 chrX 49942787 49943366 (105327194) C MamGypLTR1c LTR/Gypsy (0) 803 159 2065433 546 24.3 2.1 3.5 chrX 49943527 49943671 (105326889) C MamGypLTR1c LTR/Gypsy (660) 143 1 2065433 543 28.2 4.8 3.4 chrX 51623448 51623656 (103646904) + MamGypLTR1c LTR/Gypsy 588 799 (4) 2067599 335 31.7 11.5 2.8 chrX 52007998 52008250 (103262310) + LTR81B LTR/Gypsy 1050 1324 (69) 2067977 505 28.4 12.2 2.9 chrX 52080428 52080673 (103189887) C LTR81B LTR/Gypsy (75) 1318 1050 2068062 424 29.9 11.1 3.7 chrX 52947530 52947800 (102322760) C LTR81B LTR/Gypsy (53) 1340 1050 2069357 249 25.0 0.0 3.2 chrX 52961146 52961207 (102309353) + LTR81A LTR/Gypsy 5 64 (1286) 2069380 424 29.9 11.1 3.7 chrX 52966418 52966688 (102303872) + LTR81B LTR/Gypsy 1050 1340 (53) 2069389 663 31.8 8.0 8.8 chrX 53723692 53724056 (101546504) C MamGyp-int LTR/Gypsy (1007) 4055 3694 2070826 604 33.9 5.6 3.9 chrX 53738718 53738950 (101531610) + MamGyp-int LTR/Gypsy 2984 3218 (1844) 2070857 604 33.9 5.6 3.9 chrX 53739266 53739387 (101531173) + MamGyp-int LTR/Gypsy 3219 3345 (1717) 2070857 443 19.8 4.7 0.0 chrX 53741216 53741301 (101529259) + MamGyp-int LTR/Gypsy 3388 3477 (1585) 2070857 567 31.9 0.5 2.7 chrX 53742039 53742222 (101528338) + MamGyp-int LTR/Gypsy 3796 3975 (1087) 2070857 1310 29.6 7.0 1.8 chrX 53742480 53743088 (101527472) + MamGyp-int LTR/Gypsy 4365 5016 (46) 2070857 1137 28.7 8.0 9.9 chrX 54387445 54388199 (100882361) C MamGypLTR1d LTR/Gypsy (73) 740 1 2072113 381 38.1 7.0 1.9 chrX 54388502 54388588 (100881972) C MamGyp-int LTR/Gypsy (3619) 1443 1355 2072114 381 38.1 7.0 1.9 chrX 54388874 54389054 (100881506) C MamGyp-int LTR/Gypsy (3708) 1354 1161 2072114 732 30.6 10.9 7.3 chrX 54389848 54390288 (100880272) C MamGypLTR1c LTR/Gypsy (243) 560 104 2072119 375 34.6 3.9 6.1 chrX 54412755 54412985 (100857575) C MamGypLTR3 LTR/Gypsy (31) 808 583 2072184 536 23.2 6.6 12.8 chrX 54422751 54422899 (100847661) + MamGypLTR1d LTR/Gypsy 9 158 (655) 2072216 536 23.2 6.6 12.8 chrX 54423211 54423230 (100847330) + MamGypLTR1d LTR/Gypsy 159 165 (648) 2072216 536 23.2 6.6 12.8 chrX 54423544 54423599 (100846961) + MamGypLTR1d LTR/Gypsy 166 221 (592) 2072216 388 31.2 13.7 4.7 chrX 54423651 54423933 (100846627) + MamGypLTR1d LTR/Gypsy 333 638 (175) 2072216 522 16.3 0.0 4.7 chrX 55801967 55802106 (99468454) + MamGypLTR1b LTR/Gypsy 660 784 (0) 2074017 333 21.4 3.5 11.5 chrX 62593475 62593639 (92676921) C LTR81A LTR/Gypsy (1234) 159 18 2076593 557 29.7 3.5 6.3 chrX 63401201 63401484 (91869076) + MamGypLTR1a LTR/Gypsy 1 276 (508) 2077522 476 33.2 2.3 3.9 chrX 63401664 63401923 (91868637) + MamGypLTR1a LTR/Gypsy 524 779 (3) 2077522 551 28.3 10.7 0.5 chrX 64230171 64230376 (91040184) C MamGypLTR2b LTR/Gypsy (20) 902 676 2078402 606 32.3 5.4 2.0 chrX 68622704 68622997 (86647563) C MamGyp-int LTR/Gypsy (454) 4608 4305 2084429 354 25.0 2.7 2.7 chrX 70856088 70856198 (84414362) + MamGypLTR1b LTR/Gypsy 36 146 (657) 2088100 439 33.1 13.5 2.9 chrX 70856181 70856615 (84413945) + MamGypLTR1b LTR/Gypsy 299 760 (22) 2088100 300 32.8 4.0 6.1 chrX 72431063 72431260 (82839300) + LTR81B LTR/Gypsy 25 218 (935) 2090304 433 29.7 1.1 2.2 chrX 72431780 72431958 (82838602) + LTR81B LTR/Gypsy 1205 1381 (12) 2090304 425 18.2 14.5 1.4 chrX 75466569 75466713 (79803847) + MamGypLTR2b LTR/Gypsy 704 867 (55) 2093281 248 29.2 7.2 3.3 chrX 75466913 75467064 (79803496) C LTR81C LTR/Gypsy (13) 1140 983 2093282 229 37.3 0.0 1.2 chrX 76052246 76052329 (79218231) + MamGypLTR1b LTR/Gypsy 463 545 (237) 2093692 285 31.2 0.7 6.8 chrX 76591302 76591449 (78679111) + MamGypLTR2c LTR/Gypsy 425 563 (505) 2094112 376 29.0 6.4 1.4 chrX 78997743 78997882 (76272678) + MamGypLTR1a LTR/Gypsy 635 781 (3) 2096952 292 36.8 5.3 7.2 chrX 80420892 80421210 (74849350) + MamGyp-int LTR/Gypsy 1827 2139 (2923) 2098368 1670 35.3 8.2 5.9 chrX 80422486 80422866 (74847694) + MamGyp-int LTR/Gypsy 3400 3800 (1262) 2098368 1670 35.3 8.2 5.9 chrX 80423151 80424030 (74846530) + MamGyp-int LTR/Gypsy 3801 4690 (372) 2098368 294 28.9 3.1 0.8 chrX 80603984 80604112 (74666448) C MamGypLTR2c LTR/Gypsy (549) 519 388 2098536 569 34.8 7.1 2.6 chrX 80632939 80633319 (74637241) C MamGypLTR2b LTR/Gypsy (4) 918 521 2098585 229 24.3 1.4 0.0 chrX 80644702 80644771 (74625789) C MamGypLTR1b LTR/Gypsy (33) 751 681 2098599 639 32.0 12.5 8.8 chrX 80644988 80645474 (74625086) C MamGypLTR1b LTR/Gypsy (246) 536 32 2098599 510 26.2 3.6 2.1 chrX 81144447 81144619 (74125941) + MamGypLTR2b LTR/Gypsy 779 1051 (17) 2099112 255 24.1 7.3 1.8 chrX 83130071 83130180 (72140380) C MamGypLTR2b LTR/Gypsy (2) 920 805 2101175 387 28.5 3.2 3.8 chrX 83131038 83131291 (72139269) C LTR81AB LTR/Gypsy (977) 373 116 2101177 395 17.8 10.8 3.6 chrX 84956050 84956160 (70314400) C MamGypLTR1d LTR/Gypsy (2) 811 693 2103057 313 28.5 18.4 2.8 chrX 84956197 84956405 (70314155) C MamGypLTR2c LTR/Gypsy (123) 799 551 2103059 477 34.7 6.4 1.5 chrX 84956584 84956785 (70313775) C MamGypLTR2c LTR/Gypsy (541) 527 316 2103059 409 37.2 6.9 1.3 chrX 84976461 84976765 (70293795) C MamGyp-int LTR/Gypsy (2174) 2888 2567 2103079 311 28.0 7.7 3.2 chrX 85312953 85313107 (69957453) C MamGypLTR2c LTR/Gypsy (0) 1068 907 2103476 566 27.3 11.0 4.6 chrX 85313196 85313414 (69957146) C MamGypLTR2c LTR/Gypsy (523) 545 313 2103476 376 32.5 5.9 4.5 chrX 86547046 86547267 (68723293) C LTR81C LTR/Gypsy (183) 970 746 2104766 237 38.0 12.5 3.0 chrX 86547312 86547479 (68723081) C LTR81C LTR/Gypsy (559) 630 447 2104766 246 29.1 15.5 4.7 chrX 86547645 86547792 (68722768) C LTR81C LTR/Gypsy (977) 176 13 2104767 281 24.0 7.1 2.0 chrX 86924168 86924265 (68346295) C LTR81A LTR/Gypsy (6) 1387 1285 2105185 429 28.8 4.8 10.0 chrX 86925033 86925181 (68345379) C LTR81A LTR/Gypsy (1094) 256 104 2105185 429 28.8 4.8 10.0 chrX 86925221 86925340 (68345220) C LTR81A LTR/Gypsy (1247) 103 1 2105185 268 24.6 4.2 2.8 chrX 87328816 87328886 (67941674) + MamGypLTR1c LTR/Gypsy 251 322 (481) 2105652 323 34.6 8.1 1.2 chrX 87379969 87380129 (67890431) + LTR81C LTR/Gypsy 5 176 (977) 2105710 237 34.2 11.5 1.4 chrX 87380652 87380799 (67889761) + LTR81C LTR/Gypsy 1008 1170 (223) 2105710 363 37.5 8.5 1.9 chrX 87397132 87397438 (67873122) + MamGypLTR1b LTR/Gypsy 441 767 (15) 2105742 552 33.5 7.6 0.9 chrX 87898568 87898778 (67371782) + MamGyp-int LTR/Gypsy 4139 4363 (699) 2106341 228 31.6 16.8 5.6 chrX 88260450 88260610 (67009950) + LTR81C LTR/Gypsy 53 231 (922) 2106777 288 39.0 2.3 5.9 chrX 88693772 88694114 (66576446) C LTR81 LTR/Gypsy (315) 838 518 2107306 248 29.5 2.6 2.6 chrX 88757937 88758051 (66512509) C MamGypLTR1d LTR/Gypsy (17) 796 682 2107391 235 31.9 10.7 1.6 chrX 90151601 90151721 (65118839) C MamGypLTR2c LTR/Gypsy (539) 529 398 2108900 463 23.0 0.0 1.7 chrX 90598117 90598231 (64672329) C LTR81A LTR/Gypsy (1127) 223 111 2109374 869 32.0 11.6 4.2 chrX 91243693 91244142 (64026418) C MamGypLTR3 LTR/Gypsy (226) 613 131 2110053 1536 32.8 10.6 4.8 chrX 91993882 91995005 (63275555) C LTR81B LTR/Gypsy (33) 1360 146 2110869 770 35.7 8.2 1.9 chrX 92876429 92876853 (62393707) + MamGypLTR1d LTR/Gypsy 362 813 (0) 2111903 291 29.2 6.2 0.0 chrX 94017588 94017683 (61252877) C MamGypLTR1d LTR/Gypsy (1) 812 711 2113330 429 33.8 8.6 3.0 chrX 94847265 94847349 (60423211) C MamGypLTR1a LTR/Gypsy (302) 482 388 2114177 429 33.8 8.6 3.0 chrX 94847947 94848162 (60422398) C MamGypLTR1a LTR/Gypsy (397) 387 164 2114177 341 26.6 15.1 6.5 chrX 95249609 95249793 (60020767) + MamGypLTR1b LTR/Gypsy 582 782 (0) 2114651 424 31.8 1.6 10.9 chrX 95727848 95728236 (59542324) C MamGypLTR1d LTR/Gypsy (185) 618 289 2115232 467 39.0 6.3 2.7 chrX 95729916 95730389 (59540171) C MamGyp-int LTR/Gypsy (2850) 2212 1722 2115235 271 32.2 0.8 4.8 chrX 95803031 95803154 (59467406) C MamGypLTR1a LTR/Gypsy (38) 746 628 2115356 271 20.9 8.3 5.2 chrX 95852258 95852353 (59418207) C LTR81B LTR/Gypsy (1232) 161 63 2115433 451 29.6 3.6 6.8 chrX 96464982 96465202 (58805358) C LTR81A LTR/Gypsy (1127) 223 10 2116294 357 22.8 3.1 2.9 chrX 96794717 96794842 (58475718) C MamGypLTR1d LTR/Gypsy (7) 806 705 2116840 790 30.2 2.5 2.8 chrX 98715519 98715835 (56554725) C MamGypLTR2b LTR/Gypsy (2) 920 605 2119113 379 21.4 9.2 3.8 chrX 99328241 99328371 (55942189) C MamGypLTR1a LTR/Gypsy (2) 782 645 2119780 475 34.2 6.5 1.6 chrX 99747170 99747552 (55523008) C LTR81C LTR/Gypsy (219) 934 533 2120283 245 29.4 4.7 8.4 chrX 99747941 99748155 (55522405) C LTR81C LTR/Gypsy (58) 220 14 2120283 322 29.8 8.9 3.4 chrX 100715137 100715282 (54555278) + LTR81 LTR/Gypsy 592 745 (444) 2121893 350 25.2 5.5 3.1 chrX 100858807 100858933 (54411627) C LTR81A LTR/Gypsy (981) 369 240 2122049 259 23.5 5.9 3.9 chrX 100893781 100893882 (54376678) + MamGypLTR1c LTR/Gypsy 700 803 (0) 2122094 297 33.1 16.5 4.3 chrX 100920190 100920631 (54349929) C MamGypLTR1a LTR/Gypsy (0) 784 289 2122122 544 34.3 2.8 0.7 chrX 100922113 100922354 (54348206) C MamGypLTR1a LTR/Gypsy (229) 553 312 2122124 639 17.7 1.5 1.5 chrX 100932557 100932688 (54337872) C MamGypLTR1b LTR/Gypsy (0) 782 651 2122138 1451 30.8 5.6 4.3 chrX 100932739 100933277 (54337283) C MamGypLTR1b LTR/Gypsy (236) 546 1 2122138 232 23.6 12.2 4.3 chrX 100943566 100943680 (54326880) + MamGypLTR1d LTR/Gypsy 10 133 (680) 2122149 320 26.5 4.3 3.7 chrX 100996304 100996464 (54274096) C MamGypLTR2c LTR/Gypsy (0) 1068 907 2122214 314 30.4 4.1 7.5 chrX 100997259 100997525 (54273035) + MamGypLTR2b LTR/Gypsy 661 918 (4) 2122215 252 12.5 21.9 0.0 chrX 101050937 101051000 (54219560) C LTR81C LTR/Gypsy (22) 1131 1054 2122296 237 27.3 0.0 2.9 chrX 101058021 101058088 (54212472) C LTR81 LTR/Gypsy (415) 935 870 2122305 371 32.5 3.9 2.4 chrX 101059848 101060055 (54210505) C LTR81 LTR/Gypsy (389) 800 590 2122305 349 33.5 3.9 2.4 chrX 101595853 101596060 (53674500) + LTR81 LTR/Gypsy 590 800 (389) 2122907 259 27.3 0.0 0.0 chrX 101597463 101597528 (53673032) + LTR81 LTR/Gypsy 870 935 (415) 2122907 451 29.9 3.4 5.1 chrX 101836037 101836212 (53434348) C LTR81 LTR/Gypsy (351) 838 666 2123170 319 36.1 5.5 1.6 chrX 102020447 102020699 (53249861) C MamGypLTR1a LTR/Gypsy (423) 361 99 2123371 561 28.9 8.4 4.5 chrX 102084084 102084391 (53186169) C MamGypLTR1a LTR/Gypsy (424) 360 41 2123444 567 31.4 8.2 5.8 chrX 102097174 102097464 (53173096) C MamGypLTR1a LTR/Gypsy (420) 364 67 2123469 543 32.3 7.1 3.1 chrX 102134559 102134884 (53135676) C MamGypLTR1a LTR/Gypsy (420) 364 26 2123512 581 30.2 9.7 3.5 chrX 102656034 102656352 (52614208) C MamGypLTR1a LTR/Gypsy (420) 364 26 2124313 241 34.7 4.9 0.8 chrX 102699052 102699173 (52571387) C MamGypLTR1b LTR/Gypsy (423) 361 235 2124379 321 20.0 6.9 6.9 chrX 102699194 102699295 (52571265) C MamGypLTR1b LTR/Gypsy (639) 143 42 2124379 607 28.6 6.7 2.4 chrX 102783390 102783643 (52486917) + MamGypLTR1a LTR/Gypsy 100 364 (420) 2124507 225 31.9 0.0 0.0 chrX 102783737 102783827 (52486733) + MamGypLTR1a LTR/Gypsy 488 578 (206) 2124507 605 30.6 11.6 2.5 chrX 102812980 102813297 (52457263) + MamGypLTR1a LTR/Gypsy 15 361 (423) 2124554 251 27.2 10.9 1.4 chrX 102927059 102927105 (52343455) + MamGypLTR1a LTR/Gypsy 109 154 (630) 2124724 251 27.2 10.9 1.4 chrX 102927394 102927483 (52343077) + MamGypLTR1a LTR/Gypsy 155 258 (526) 2124724 899 32.3 2.3 1.1 chrX 102927541 102927931 (52342629) + MamGypLTR1a LTR/Gypsy 373 781 (3) 2124724 322 34.6 2.5 1.2 chrX 103559276 103559436 (51711124) C MamGypLTR1b LTR/Gypsy (53) 729 567 2125683 338 27.7 10.2 6.2 chrX 103740405 103740581 (51529979) C LTR81 LTR/Gypsy (0) 1189 1006 2125982 297 30.1 12.8 4.9 chrX 103742347 103742549 (51528011) C LTR81 LTR/Gypsy (935) 458 240 2125982 289 26.1 6.8 0.0 chrX 103742697 103742784 (51527776) C LTR81 LTR/Gypsy (1175) 218 125 2125982 409 23.7 1.1 0.0 chrX 104155499 104155591 (51114969) + LTR81AB LTR/Gypsy 26 119 (159) 2126510 514 31.6 7.1 0.6 chrX 105210963 105211131 (50059429) C MamGypLTR1b LTR/Gypsy (84) 698 519 2127860 492 32.2 11.8 6.7 chrX 105267180 105267911 (50002649) + MamGypLTR2c LTR/Gypsy 259 1027 (41) 2127925 1574 33.5 7.8 2.6 chrX 106273390 106274121 (48996439) C MamGyp-int LTR/Gypsy (1205) 3857 3083 2129134 1574 33.5 7.8 2.6 chrX 106274398 106274431 (48996129) C MamGyp-int LTR/Gypsy (1980) 3082 3051 2129134 1729 28.4 2.4 0.9 chrX 106274507 106274968 (48995592) C MamGyp-int LTR/Gypsy (2138) 2924 2456 2129134 263 26.5 4.7 2.4 chrX 106284467 106284551 (48986009) C MamGyp-int LTR/Gypsy (3312) 1750 1664 2129152 275 25.7 1.4 2.8 chrX 107805062 107805133 (47465427) + MamGypLTR2c LTR/Gypsy 289 359 (709) 2131443 448 33.3 7.2 8.3 chrX 107805216 107805578 (47464982) + MamGypLTR1d LTR/Gypsy 429 787 (26) 2131444 1223 32.7 1.5 2.1 chrX 108637307 108637834 (46632726) C MamGyp-int LTR/Gypsy (3946) 1116 592 2132261 292 29.9 12.8 5.8 chrX 108637951 108638262 (46632298) C MamGyp-int LTR/Gypsy (4627) 435 102 2132261 298 26.7 3.9 5.5 chrX 108822210 108822336 (46448224) + MamGypLTR1d LTR/Gypsy 9 133 (680) 2132498 854 31.2 9.8 6.0 chrX 108833130 108833650 (46436910) + MamGyp-int LTR/Gypsy 4445 4985 (77) 2132513 242 28.9 4.7 2.4 chrX 109566335 109566419 (45704141) C MamGypLTR2c LTR/Gypsy (626) 442 356 2133609 1377 31.4 5.0 6.9 chrX 109575762 109576519 (45694041) + MamGypLTR1b LTR/Gypsy 1 744 (38) 2133624 272 16.4 4.9 0.0 chrX 109577453 109577513 (45693047) + MamGypLTR1b LTR/Gypsy 717 780 (4) 2133624 240 30.2 13.2 5.1 chrX 109822565 109822798 (45447762) + LTR81A LTR/Gypsy 205 457 (893) 2133995 890 34.1 11.0 2.5 chrX 109822862 109823372 (45447188) + LTR81A LTR/Gypsy 593 1146 (204) 2133995 571 36.8 3.5 3.3 chrX 110474580 110475009 (44795551) C MamGyp-int LTR/Gypsy (217) 4845 4415 2134851 876 35.5 2.1 3.5 chrX 110475255 110475738 (44794822) C MamGyp-int LTR/Gypsy (737) 4325 3849 2134851 417 15.6 1.3 0.0 chrX 110810010 110810086 (44460474) + MamGypLTR1c LTR/Gypsy 726 803 (0) 2135368 281 32.5 0.0 8.1 chrX 111958996 111959082 (43311478) + MamGypLTR1c LTR/Gypsy 543 622 (181) 2136968 466 31.5 10.0 7.8 chrX 112737457 112738020 (42532540) C LTR81C LTR/Gypsy (11) 1142 510 2137989 233 41.4 6.5 2.4 chrX 112738144 112738435 (42532125) C MamGypLTR2c LTR/Gypsy (746) 322 19 2137990 365 31.8 19.9 0.9 chrX 112907200 112907545 (42363015) + MamGypLTR2b LTR/Gypsy 502 913 (9) 2138207 286 29.4 6.8 0.6 chrX 112985949 112986109 (42284451) C MamGypLTR2b LTR/Gypsy (0) 922 752 2138291 484 34.6 6.5 4.0 chrX 112986297 112986821 (42283739) C MamGypLTR2b LTR/Gypsy (552) 516 12 2138291 258 35.3 5.8 0.7 chrX 113166042 113166178 (42104382) C LTR81 LTR/Gypsy (902) 287 144 2138545 245 21.1 0.0 1.7 chrX 113166201 113166258 (42104302) C LTR81AB LTR/Gypsy (0) 278 222 2138546 344 19.6 9.0 12.0 chrX 113176092 113176224 (42094336) + LTR81AB LTR/Gypsy 43 171 (107) 2138560 271 34.0 6.1 2.7 chrX 113176341 113176488 (42094072) C LTR81C LTR/Gypsy (852) 301 149 2138561 281 36.0 13.9 1.7 chrX 113360243 113360479 (41910081) C MamGypLTR3 LTR/Gypsy (0) 839 574 2138868 524 36.4 5.3 2.2 chrX 113360680 113360904 (41909656) C MamGypLTR3 LTR/Gypsy (394) 445 214 2138868 251 15.2 0.0 2.1 chrX 113382105 113382151 (41888409) C LTR81A LTR/Gypsy (7) 1343 1298 2138899 783 30.3 2.9 4.8 chrX 114139805 114140116 (41130444) C MamGyp-int LTR/Gypsy (4619) 443 138 2139833 281 22.0 8.0 12.7 chrX 114192768 114193033 (41077527) C LTR81A LTR/Gypsy (1133) 260 18 2139896 723 33.5 8.6 7.2 chrX 114270729 114271318 (40999242) + MamGypLTR1a LTR/Gypsy 1 582 (202) 2140017 723 33.5 8.6 7.2 chrX 114271651 114271824 (40998736) + MamGypLTR1a LTR/Gypsy 583 776 (8) 2140017 364 25.9 14.1 1.3 chrX 114567422 114567570 (40702990) + MamGypLTR1c LTR/Gypsy 2 169 (634) 2140440 476 27.6 8.9 3.5 chrX 114694045 114694339 (40576221) + MamGypLTR1c LTR/Gypsy 2 329 (484) 2140658 432 37.4 1.0 0.0 chrX 114694371 114694568 (40575992) + MamGypLTR1c LTR/Gypsy 379 578 (225) 2140658 231 12.3 3.4 3.4 chrX 115978625 115978683 (39291877) C LTR81B LTR/Gypsy (1207) 186 128 2142156 510 26.9 8.5 3.2 chrX 116850117 116850362 (38420198) C MamGypLTR2b LTR/Gypsy (0) 922 664 2143165 406 23.1 6.0 12.9 chrX 117442463 117442728 (37827832) C LTR81C LTR/Gypsy (38) 1115 842 2143986 410 29.3 14.8 2.5 chrX 117443601 117443803 (37826757) C LTR81C LTR/Gypsy (923) 230 3 2143986 473 37.4 2.5 2.7 chrX 117959335 117959738 (37310822) + MamGyp-int LTR/Gypsy 591 993 (4069) 2144964 286 24.1 19.0 10.6 chrX 119552651 119552971 (35717589) C MamGypLTR1b LTR/Gypsy (76) 706 359 2147766 676 26.8 10.6 1.0 chrX 119789950 119790156 (35480404) C MamGyp-int LTR/Gypsy (2056) 3006 2780 2148205 1829 23.2 1.3 0.0 chrX 119790197 119790571 (35479989) C MamGyp-int LTR/Gypsy (2266) 2796 2417 2148205 227 22.1 17.8 4.2 chrX 119905879 119905996 (35364564) C MamGypLTR2b LTR/Gypsy (43) 879 746 2148412 494 36.1 9.7 3.8 chrX 119906120 119906511 (35364049) C MamGypLTR2b LTR/Gypsy (505) 417 3 2148413 1134 34.8 6.0 2.5 chrX 120424558 120425005 (34845555) C MamGypLTR1b LTR/Gypsy (0) 782 319 2149002 703 25.1 13.5 3.1 chrX 120430349 120430607 (34839953) + LTR81B LTR/Gypsy 1090 1375 (18) 2149009 301 33.5 2.6 0.0 chrX 121966121 121966272 (33304288) + MamGypLTR2c LTR/Gypsy 900 1055 (13) 2150648 279 25.6 8.9 2.4 chrX 122242659 122242782 (33027778) C MamGypLTR2b LTR/Gypsy (80) 842 711 2151032 252 30.7 3.3 0.0 chrX 122245151 122245300 (33025260) + MamGypLTR2b LTR/Gypsy 679 833 (89) 2151034 268 35.5 3.8 3.1 chrX 122275537 122275696 (32994864) + MamGypLTR1c LTR/Gypsy 345 505 (308) 2151066 556 27.3 8.6 7.4 chrX 122275826 122276094 (32994466) + MamGypLTR1c LTR/Gypsy 527 798 (5) 2151066 404 28.4 25.7 5.4 chrX 123470861 123471307 (31799253) C MamGypLTR1b LTR/Gypsy (209) 573 36 2153176 257 26.6 1.2 2.5 chrX 124459117 124459197 (30811363) C MamGypLTR1b LTR/Gypsy (72) 712 633 2154597 700 29.9 1.1 0.0 chrX 124459265 124459451 (30811109) C MamGypLTR1b LTR/Gypsy (253) 529 341 2154597 980 34.1 11.0 6.0 chrX 124950881 124951618 (30318942) + LTR81B LTR/Gypsy 605 1379 (14) 2155110 249 28.8 3.7 1.2 chrX 125689982 125690062 (29580498) + MamGypLTR1b LTR/Gypsy 651 733 (49) 2155922 262 31.0 3.0 1.0 chrX 127192884 127192984 (28077576) C MamGyp-int LTR/Gypsy (2770) 2292 2190 2157622 245 34.7 7.9 0.0 chrX 128101912 128102101 (27168459) + MamGypLTR1d LTR/Gypsy 66 270 (543) 2158666 667 24.1 8.4 1.4 chrX 128162055 128162269 (27108291) + MamGypLTR1c LTR/Gypsy 43 272 (531) 2158747 335 20.0 1.5 0.0 chrX 128168970 128169034 (27101526) + MamGypLTR1d LTR/Gypsy 748 813 (0) 2158753 1352 27.5 9.7 3.2 chrX 128441618 128442090 (26828470) + MamGypLTR1b LTR/Gypsy 279 782 (0) 2159104 409 27.1 9.7 1.5 chrX 128457434 128457567 (26812993) C LTR81B LTR/Gypsy (1105) 288 153 2159126 409 30.0 10.4 0.9 chrX 128457846 128457975 (26812585) C LTR81B LTR/Gypsy (1241) 152 2 2159126 465 28.8 16.8 4.0 chrX 128667113 128667463 (26603097) C MamGypLTR2b LTR/Gypsy (68) 854 459 2159423 324 29.6 9.4 6.4 chrX 129626615 129626975 (25643585) + LTR81B LTR/Gypsy 118 485 (865) 2161130 358 26.5 3.6 12.5 chrX 129627464 129627536 (25643024) + LTR81B LTR/Gypsy 1010 1080 (313) 2161130 358 26.5 3.6 12.5 chrX 129627688 129627781 (25642779) + LTR81B LTR/Gypsy 1081 1162 (231) 2161130 337 34.8 8.8 3.0 chrX 131471334 131471629 (23798931) C MamGyp-int LTR/Gypsy (4157) 905 593 2163654 633 21.7 6.1 1.2 chrX 132113607 132113769 (23156791) + MamGypLTR2c LTR/Gypsy 870 1040 (28) 2164571 274 26.9 2.6 0.0 chrX 133290014 133290091 (21980469) C MamGypLTR2b LTR/Gypsy (182) 740 661 2166426 225 31.0 2.9 4.8 chrX 133708848 133708952 (21561608) C LTR81C LTR/Gypsy (722) 431 329 2167189 231 31.8 1.1 1.1 chrX 134254267 134254355 (21016205) + LTR81A LTR/Gypsy 1226 1314 (36) 2168153 231 31.8 1.1 1.1 chrX 134386059 134386147 (20884413) C LTR81A LTR/Gypsy (36) 1314 1226 2168306 262 30.4 0.0 2.9 chrX 134442299 134442403 (20828157) C LTR81C LTR/Gypsy (31) 1122 1021 2168347 546 26.3 6.2 1.7 chrX 134472512 134472689 (20797871) C MamGypLTR2c LTR/Gypsy (2) 1066 881 2168389 259 28.3 7.6 3.0 chrX 134530756 134530886 (20739674) + MamGypLTR1c LTR/Gypsy 667 803 (0) 2168466 276 30.5 1.9 0.9 chrX 134603040 134603145 (20667415) + MamGyp-int LTR/Gypsy 1548 1654 (3408) 2168567 360 28.2 5.1 5.1 chrX 136962291 136962549 (18308011) C LTR81AB LTR/Gypsy (977) 373 110 2172441 258 18.2 0.0 0.0 chrX 136963223 136963266 (18307294) + MamGyp-int LTR/Gypsy 2413 2456 (2606) 2172444 274 27.6 6.1 1.0 chrX 136963387 136963485 (18307075) + MamGyp-int LTR/Gypsy 2608 2711 (2351) 2172444 710 23.2 6.8 6.4 chrX 138330301 138330478 (16940082) C MamGypLTR2c LTR/Gypsy (4) 1064 879 2174275 710 28.8 8.6 4.8 chrX 138330683 138330842 (16939718) C MamGypLTR2c LTR/Gypsy (190) 878 561 2174275 965 30.5 7.4 6.2 chrX 138803706 138804303 (16466257) C MamGypLTR1c LTR/Gypsy (137) 666 62 2174903 375 37.9 1.2 1.8 chrX 139990739 139990902 (15279658) C MamGyp-int LTR/Gypsy (932) 4130 3968 2176678 259 26.1 0.0 0.0 chrX 140026656 140026724 (15243836) C MamGypLTR2c LTR/Gypsy (7) 1061 993 2176755 239 16.3 0.0 0.0 chrX 140026803 140026845 (15243715) C MamGypLTR2c LTR/Gypsy (118) 804 762 2176755 360 31.9 5.1 3.5 chrX 140449528 140449788 (14820772) + LTR81B LTR/Gypsy 925 1393 (0) 2177391 629 33.9 5.6 4.3 chrX 141198110 141198433 (14072127) C MamGypLTR1a LTR/Gypsy (407) 377 50 2178443 231 32.8 8.3 1.6 chrX 142748307 142748427 (12522133) + MamGypLTR1d LTR/Gypsy 72 200 (603) 2180497 333 34.1 5.1 6.5 chrX 142750596 142750871 (12519689) + MamGypLTR1d LTR/Gypsy 317 588 (225) 2180497 760 31.5 6.5 0.3 chrX 143058171 143058463 (12212097) + MamGyp-int LTR/Gypsy 78 388 (4674) 2180909 314 27.7 3.7 12.2 chrX 143060979 143061167 (12209393) + MamGyp-int LTR/Gypsy 2811 2983 (2079) 2180909 733 35.5 6.2 2.5 chrX 143061441 143061873 (12208687) + MamGyp-int LTR/Gypsy 3345 3793 (1269) 2180909 497 38.4 5.8 3.7 chrX 143062475 143062850 (12207710) + MamGyp-int LTR/Gypsy 4237 4620 (442) 2180909 498 35.8 10.3 0.7 chrX 143106464 143106744 (12163816) C MamGypLTR1a LTR/Gypsy (19) 765 458 2180970 246 38.3 10.7 3.3 chrX 143106772 143107014 (12163546) C MamGypLTR1a LTR/Gypsy (385) 418 158 2180970 290 39.9 5.1 4.0 chrX 143216359 143216611 (12053949) C LTR81A LTR/Gypsy (313) 1037 782 2181125 229 35.4 2.5 5.0 chrX 143216611 143216729 (12053831) C MamGypLTR2c LTR/Gypsy (525) 543 428 2181126 243 19.1 0.0 0.0 chrX 143498277 143498318 (11772242) + MamGypLTR1d LTR/Gypsy 757 798 (15) 2181477 558 23.1 2.9 2.9 chrX 144018765 144018902 (11251658) + MamGypLTR1a LTR/Gypsy 645 782 (2) 2182095 325 40.7 0.0 0.7 chrX 144090140 144090285 (11180275) + MamGyp-int LTR/Gypsy 1257 1401 (3661) 2182173 301 25.3 9.1 1.1 chrX 144560286 144560373 (10710187) C MamGypLTR2c LTR/Gypsy (129) 939 845 2182840 361 33.4 11.6 3.5 chrX 144765192 144765510 (10505050) C MamGypLTR1b LTR/Gypsy (57) 725 381 2183103 504 32.0 7.5 3.4 chrX 145263969 145264226 (10006334) + LTR81B LTR/Gypsy 754 1022 (371) 2183763 264 20.5 7.4 7.4 chrX 145265393 145265513 (10005047) + LTR81B LTR/Gypsy 1214 1334 (59) 2183763 313 33.5 7.9 0.5 chrX 145438538 145438726 (9831834) C MamGypLTR1c LTR/Gypsy (10) 793 591 2183981 341 34.9 7.0 1.7 chrX 145438909 145439080 (9831480) C MamGypLTR1c LTR/Gypsy (309) 494 314 2183981 301 37.7 12.3 1.0 chrX 145693209 145693607 (9576953) + MamGypLTR1a LTR/Gypsy 131 574 (210) 2184291 312 26.4 4.5 4.5 chrX 145954342 145954452 (9316108) + MamGypLTR1b LTR/Gypsy 631 741 (41) 2184629 268 39.5 1.6 0.0 chrX 145955914 145956037 (9314523) C MamGypLTR1b LTR/Gypsy (206) 576 451 2184633 336 29.5 9.4 2.4 chrX 146610953 146611122 (8659438) C MamGypLTR1d LTR/Gypsy (603) 210 29 2185555 248 31.4 7.4 3.7 chrX 146728242 146728456 (8542104) + MamGypLTR2b LTR/Gypsy 698 920 (2) 2185716 345 25.0 10.2 1.7 chrX 146797002 146797119 (8473441) C MamGypLTR1c LTR/Gypsy (7) 796 669 2185791 268 22.3 24.4 3.7 chrX 146822062 146822196 (8448364) C MamGypLTR1c LTR/Gypsy (5) 798 636 2185840 369 28.9 3.0 4.5 chrX 146822290 146822423 (8448137) C MamGypLTR1c LTR/Gypsy (220) 583 452 2185840 515 31.7 0.0 0.7 chrX 146824539 146824684 (8445876) C MamGyp-int LTR/Gypsy (2852) 2210 2066 2185845 579 34.1 18.0 2.1 chrX 146883492 146883703 (8386857) C LTR81 LTR/Gypsy (224) 965 744 2185939 579 34.1 18.0 2.1 chrX 146884017 146884225 (8386335) C LTR81 LTR/Gypsy (446) 743 476 2185939 238 24.3 0.0 9.1 chrX 146884409 146884485 (8386075) C LTR81C LTR/Gypsy (958) 195 126 2185941 306 32.6 1.5 5.2 chrX 146884454 146884589 (8385971) C LTR81 LTR/Gypsy (996) 397 267 2185939 1291 28.8 8.9 6.0 chrX 146899487 146900265 (8370295) C MamGypLTR1c LTR/Gypsy (0) 803 3 2185969 345 28.1 2.8 4.3 chrX 147158436 147158576 (8111984) C MamGypLTR2b LTR/Gypsy (0) 922 784 2186298 629 29.9 7.0 2.7 chrX 147246452 147246709 (8023851) C MamGypLTR3 LTR/Gypsy (19) 820 552 2186438 648 26.4 0.6 5.8 chrX 147285124 147285443 (7985117) + LTR81AB LTR/Gypsy 38 344 (1006) 2186481 569 37.6 9.1 3.8 chrX 147285588 147285927 (7984633) + LTR81AB LTR/Gypsy 406 783 (406) 2186481 569 39.6 0.0 4.0 chrX 147286240 147286319 (7984241) + LTR81AB LTR/Gypsy 784 858 (331) 2186481 452 24.7 11.0 7.6 chrX 147287249 147287511 (7983049) + LTR81AB LTR/Gypsy 873 1144 (9) 2186481 401 28.6 2.0 4.5 chrX 147415084 147415284 (7855276) + LTR81A LTR/Gypsy 1085 1280 (70) 2186648 436 33.8 8.8 3.3 chrX 147534035 147534273 (7736287) + MamGypLTR1a LTR/Gypsy 475 735 (49) 2186806 436 33.8 8.8 3.3 chrX 147534378 147534409 (7736151) + MamGypLTR1a LTR/Gypsy 736 761 (23) 2186806 239 35.2 2.7 5.8 chrX 147553045 147553267 (7717293) + MamGypLTR2b LTR/Gypsy 159 374 (548) 2186833 290 31.7 6.3 2.8 chrX 147553782 147553924 (7716636) + MamGypLTR1c LTR/Gypsy 649 796 (7) 2186835 1173 34.0 8.0 1.3 chrX 148358038 148358577 (6911983) + MamGyp-int LTR/Gypsy 1752 2327 (2735) 2187824 966 31.7 7.5 2.1 chrX 148604217 148604644 (6665916) C MamGyp-int LTR/Gypsy (366) 4696 4246 2188148 307 23.4 7.3 1.8 chrX 148781221 148781329 (6489231) C MamGyp-int LTR/Gypsy (1604) 3458 3344 2188357 544 22.5 5.1 11.0 chrX 149696126 149696380 (5574180) + LTR81A LTR/Gypsy 23 262 (1088) 2189400 225 21.5 22.5 1.2 chrX 149697085 149697164 (5573396) + LTR81A LTR/Gypsy 260 356 (994) 2189400 239 15.8 0.0 0.0 chrX 149697300 149697337 (5573223) + LTR81A LTR/Gypsy 405 442 (747) 2189400 548 31.6 8.7 1.2 chrX 150200569 150200821 (5069739) C MamGypLTR1b LTR/Gypsy (11) 771 500 2190344 568 32.9 7.0 6.0 chrX 150213657 150213858 (5056702) C LTR81C LTR/Gypsy (8) 1145 940 2190371 568 32.9 7.0 6.0 chrX 150214161 150214342 (5056218) C LTR81C LTR/Gypsy (214) 939 758 2190371 384 24.0 20.8 2.6 chrX 150253424 150253577 (5016983) C MamGypLTR1d LTR/Gypsy (7) 806 625 2190458 925 31.9 1.6 2.4 chrX 152159739 152160188 (3110372) C MamGyp-int LTR/Gypsy (4555) 507 62 2192972 328 32.5 3.5 4.2 chrX 152197151 152197436 (3073124) + MamGyp-int LTR/Gypsy 127 410 (4652) 2193017 644 33.6 2.3 2.0 chrX 152213131 152213431 (3057129) + MamGyp-int LTR/Gypsy 2032 2333 (2729) 2193038 1833 34.3 3.0 3.6 chrX 152225370 152226424 (3044136) + MamGyp-int LTR/Gypsy 62 1110 (3952) 2193056 440 39.8 0.5 2.3 chrX 152338908 152339293 (2931267) + MamGyp-int LTR/Gypsy 106 484 (4578) 2193125 440 39.8 0.5 2.3 chrX 152342428 152342813 (2927747) C MamGyp-int LTR/Gypsy (4578) 484 106 2193126 352 35.4 2.1 2.8 chrX 152585838 152586125 (2684435) C MamGyp-int LTR/Gypsy (4652) 410 125 2193405 390 36.4 0.8 1.6 chrX 152664030 152664286 (2606274) C MamGyp-int LTR/Gypsy (4681) 381 127 2193500 332 22.1 16.2 4.2 chrX 154321573 154321714 (948846) C LTR81B LTR/Gypsy (154) 1239 1081 2195941 326 27.7 7.5 6.9 chrX 154595249 154595407 (675153) + MamGypLTR1c LTR/Gypsy 229 388 (415) 2196315 372 27.7 7.5 6.9 chrX 154704817 154704975 (565585) C MamGypLTR1c LTR/Gypsy (415) 388 229 2196428 312 28.8 2.2 6.7 chr8 348306 348484 (146015538) + LTR81B LTR/Gypsy 13 183 (1210) 2197582 332 28.4 11.5 6.8 chr8 1596539 1596772 (144767250) C MamGypLTR1a LTR/Gypsy (35) 749 505 2198729 276 32.5 7.3 1.7 chr8 2130476 2130707 (144233315) C LTR81A LTR/Gypsy (157) 1193 949 2199308 276 33.0 5.2 6.2 chr8 3102338 3102625 (143261397) + MamGypLTR3 LTR/Gypsy 545 829 (10) 2200580 227 18.3 12.5 1.4 chr8 3323275 3323346 (143040676) + MamGypLTR1a LTR/Gypsy 681 760 (24) 2200826 368 26.6 9.9 1.6 chr8 3451063 3451253 (142912769) + MamGypLTR2b LTR/Gypsy 700 906 (16) 2201002 445 33.3 5.9 1.4 chr8 5271893 5272114 (141091908) C MamGypLTR2c LTR/Gypsy (0) 1068 837 2203380 245 25.8 2.1 1.1 chr8 5599595 5599688 (140764334) + MamGypLTR1b LTR/Gypsy 649 743 (39) 2203798 231 13.5 2.7 0.0 chr8 6648074 6648110 (139715912) + MamGypLTR2c LTR/Gypsy 36 73 (995) 2205340 454 24.0 10.0 5.9 chr8 6984039 6984249 (139379773) + MamGypLTR1b LTR/Gypsy 566 781 (3) 2205785 479 24.5 7.3 3.0 chr8 7045203 7045366 (139318656) C MamGypLTR1a LTR/Gypsy (21) 763 593 2205865 479 24.5 7.3 3.0 chr8 7957180 7957343 (138406679) + MamGypLTR1a LTR/Gypsy 593 763 (21) 2206839 394 33.3 9.4 1.6 chr8 8138626 8138881 (138225141) + MamGypLTR1a LTR/Gypsy 1 276 (508) 2207102 259 33.8 9.9 7.1 chr8 8139169 8139420 (138224602) + MamGypLTR1a LTR/Gypsy 498 756 (26) 2207102 381 26.3 3.6 6.0 chr8 8297927 8298092 (138065930) + MamGypLTR1d LTR/Gypsy 41 202 (601) 2207370 409 30.3 10.9 5.1 chr8 8298827 8299106 (138064916) + MamGypLTR1d LTR/Gypsy 493 810 (3) 2207370 408 29.4 17.6 4.8 chr8 8377300 8377740 (137986282) C MamGypLTR1c LTR/Gypsy (3) 800 135 2207509 232 26.4 13.8 8.2 chr8 8471157 8471387 (137892635) + LTR81B LTR/Gypsy 302 545 (848) 2207653 416 30.9 13.9 2.8 chr8 8471414 8471669 (137892353) + LTR81B LTR/Gypsy 810 922 (471) 2207654 416 34.7 4.0 2.0 chr8 8472203 8472339 (137891683) + LTR81B LTR/Gypsy 923 1061 (332) 2207654 424 24.6 12.6 2.3 chr8 8485761 8485935 (137878087) C MamGypLTR2c LTR/Gypsy (587) 481 289 2207671 258 28.4 12.6 5.2 chr8 8600400 8600706 (137763316) + MamGypLTR2c LTR/Gypsy 431 878 (190) 2207882 357 26.1 4.5 3.0 chr8 9016978 9017111 (137346911) C MamGypLTR1b LTR/Gypsy (10) 772 637 2208623 403 29.3 10.6 4.0 chr8 9072373 9072571 (137291451) C MamGypLTR1b LTR/Gypsy (10) 772 561 2208723 255 32.6 12.8 7.2 chr8 9072634 9073007 (137291015) C MamGypLTR1b LTR/Gypsy (366) 416 22 2208723 302 25.9 7.3 1.2 chr8 9174866 9174947 (137189075) + MamGypLTR3 LTR/Gypsy 701 787 (52) 2208901 266 17.6 0.0 5.6 chr8 10181421 10181474 (136182548) C MamGypLTR3 LTR/Gypsy (9) 830 780 2210434 442 30.9 9.3 5.9 chr8 11073156 11073348 (135290674) C MamGypLTR1c LTR/Gypsy (1) 802 603 2211771 442 31.7 8.5 6.2 chr8 11073714 11073911 (135290111) C MamGypLTR1c LTR/Gypsy (201) 602 391 2211771 268 31.4 8.4 1.4 chr8 11364107 11364248 (134999774) C MamGypLTR1c LTR/Gypsy (116) 687 536 2212199 308 28.2 5.3 0.8 chr8 11860013 11860178 (134503844) + MamGypLTR2b LTR/Gypsy 623 883 (39) 2213008 466 25.2 7.3 3.0 chr8 12424789 12424952 (133939070) C MamGypLTR1a LTR/Gypsy (21) 763 593 2213677 484 24.5 7.3 3.0 chr8 12482890 12483053 (133880969) C MamGypLTR1a LTR/Gypsy (21) 763 593 2213772 278 27.7 0.9 12.4 chr8 12691654 12691863 (133672159) C LTR81B LTR/Gypsy (1207) 186 1 2214099 274 23.7 1.7 1.7 chr8 12889548 12889607 (133474415) + MamGypLTR1b LTR/Gypsy 444 503 (279) 2214457 285 28.1 3.9 7.7 chr8 13524723 13524826 (132839196) + MamGypLTR1a LTR/Gypsy 37 136 (646) 2215442 345 35.2 3.0 1.5 chr8 13525231 13525429 (132838593) + MamGypLTR1a LTR/Gypsy 576 777 (7) 2215442 293 28.3 17.9 3.4 chr8 14369653 14369831 (131994191) + MamGypLTR3 LTR/Gypsy 635 839 (0) 2216561 455 32.5 4.8 2.9 chr8 14846612 14846817 (131517205) + MamGypLTR2c LTR/Gypsy 288 497 (571) 2217213 270 32.5 0.0 0.0 chr8 14847177 14847253 (131516769) + MamGypLTR2c LTR/Gypsy 911 987 (81) 2217213 244 33.0 11.3 4.9 chr8 15035255 15035458 (131328564) C MamGypLTR1a LTR/Gypsy (208) 576 360 2217443 408 28.9 2.9 3.3 chr8 15222988 15223167 (131140855) C MamGypLTR1a LTR/Gypsy (6) 778 595 2217690 252 31.7 0.0 2.4 chr8 15223231 15223314 (131140708) C MamGypLTR1a LTR/Gypsy (299) 485 404 2217690 252 29.3 0.0 1.3 chr8 15223497 15223572 (131140450) C MamGypLTR1a LTR/Gypsy (653) 131 57 2217690 260 32.0 10.0 5.0 chr8 16149200 16149459 (130214563) + MamGypLTR1b LTR/Gypsy 498 770 (12) 2218984 468 31.8 10.8 6.6 chr8 16337523 16337899 (130026123) C MamGypLTR1c LTR/Gypsy (389) 414 13 2219237 253 24.7 23.6 2.6 chr8 16384619 16384813 (129979209) + LTR81B LTR/Gypsy 83 318 (1075) 2219297 226 16.0 3.9 3.9 chr8 16385547 16385598 (129978424) + LTR81C LTR/Gypsy 893 944 (209) 2219298 403 32.4 12.7 4.8 chr8 16462715 16463093 (129900929) + MamGypLTR1a LTR/Gypsy 11 419 (365) 2219410 289 32.2 9.5 4.5 chr8 17291164 17291543 (129072479) + MamGypLTR2c LTR/Gypsy 7 405 (663) 2220603 255 13.5 0.0 0.0 chr8 17643333 17643369 (128720653) + LTR81 LTR/Gypsy 586 622 (567) 2221111 296 27.8 8.8 2.2 chr8 17644035 17644170 (128719852) + MamGypLTR2c LTR/Gypsy 881 1025 (43) 2221113 285 30.8 8.2 1.6 chr8 17754089 17754210 (128609812) + MamGypLTR1c LTR/Gypsy 1 130 (673) 2221317 344 35.4 1.8 2.4 chr8 18005320 18005487 (128358535) + LTR81C LTR/Gypsy 566 732 (421) 2221652 259 21.0 0.0 6.1 chr8 18272412 18272477 (128091545) + MamGypLTR1c LTR/Gypsy 732 793 (10) 2221988 238 32.6 12.3 0.0 chr8 18930118 18930255 (127433767) + MamGypLTR1a LTR/Gypsy 415 569 (215) 2222950 313 33.9 14.9 0.6 chr8 18930412 18930592 (127433430) + MamGypLTR1a LTR/Gypsy 581 803 (0) 2222950 604 30.3 11.8 3.5 chr8 19019883 19020221 (127343801) + MamGypLTR2b LTR/Gypsy 556 922 (0) 2223100 387 29.1 15.4 5.1 chr8 19024177 19024332 (127339690) + LTR81B LTR/Gypsy 59 230 (1120) 2223107 228 25.0 6.7 0.0 chr8 19024395 19024454 (127339568) + LTR81 LTR/Gypsy 161 224 (965) 2223108 240 32.9 2.4 9.0 chr8 19025013 19025179 (127338843) + LTR81B LTR/Gypsy 1207 1362 (31) 2223107 489 25.5 9.8 1.2 chr8 19117344 19117506 (127246516) + MamGypLTR1c LTR/Gypsy 626 802 (1) 2223256 254 29.2 2.1 1.0 chr8 19877013 19877109 (126486913) + MamGypLTR3 LTR/Gypsy 733 830 (9) 2224452 263 26.1 12.3 2.6 chr8 21315528 21315641 (125048381) + MamGypLTR1d LTR/Gypsy 468 592 (221) 2226682 347 28.5 17.2 7.4 chr8 21358574 21358809 (125005213) C MamGypLTR2b LTR/Gypsy (3) 919 641 2226760 347 28.5 17.2 7.4 chr8 21359177 21359306 (125004716) C MamGypLTR2b LTR/Gypsy (282) 640 517 2226760 562 31.8 12.0 4.7 chr8 21364652 21365142 (124998880) + MamGypLTR1b LTR/Gypsy 254 780 (2) 2226769 305 29.6 9.0 7.8 chr8 21377560 21377856 (124986166) + MamGypLTR1b LTR/Gypsy 264 579 (203) 2226787 320 26.1 6.2 1.9 chr8 21519468 21519627 (124844395) + MamGypLTR1c LTR/Gypsy 55 221 (582) 2227004 454 30.4 3.5 1.8 chr8 21725730 21725900 (124638122) C MamGypLTR1b LTR/Gypsy (2) 780 607 2227353 505 30.6 24.6 1.8 chr8 22820234 22820919 (123543103) + MamGypLTR2c LTR/Gypsy 226 1068 (0) 2229179 426 31.9 11.0 5.6 chr8 23988159 23988477 (122375545) + MamGypLTR3 LTR/Gypsy 479 814 (25) 2230974 241 23.8 1.1 4.5 chr8 24633870 24633957 (121730065) C MamGypLTR3 LTR/Gypsy (27) 812 728 2231883 554 33.2 4.3 1.2 chr8 24931733 24931988 (121432034) C MamGypLTR1b LTR/Gypsy (0) 782 519 2232360 407 27.6 10.9 1.8 chr8 25548103 25548353 (120815669) C MamGypLTR2b LTR/Gypsy (6) 1062 781 2233403 258 26.2 12.4 5.0 chr8 25553452 25553652 (120810370) + LTR81AB LTR/Gypsy 6 221 (57) 2233409 310 28.7 1.1 0.0 chr8 25674428 25674514 (120689508) C MamGypLTR1c LTR/Gypsy (658) 145 58 2233571 257 25.4 12.3 8.9 chr8 25983198 25983400 (120380622) C LTR81AB LTR/Gypsy (45) 1108 899 2234023 341 29.2 4.5 3.0 chr8 25983785 25983918 (120380104) C MamGypLTR2c LTR/Gypsy (622) 446 311 2234024 773 28.8 9.6 5.8 chr8 25984100 25984464 (120379558) C LTR81AB LTR/Gypsy (970) 380 2 2234023 595 30.3 8.8 3.1 chr8 26080737 26081053 (120282969) + MamGypLTR3 LTR/Gypsy 472 806 (33) 2234237 227 32.9 2.3 1.2 chr8 26103926 26104011 (120260011) + MamGypLTR1c LTR/Gypsy 265 351 (433) 2234293 380 28.9 6.3 0.7 chr8 26105351 26105493 (120258529) + MamGypLTR1c LTR/Gypsy 594 744 (59) 2234293 3030 32.3 1.5 1.7 chr8 26365257 26366372 (119997650) C MamGyp-int LTR/Gypsy (3946) 1116 3 2234760 253 30.4 12.7 0.8 chr8 26711577 26711702 (119652320) + LTR81 LTR/Gypsy 106 246 (907) 2235323 366 27.2 4.3 0.0 chr8 26712781 26712872 (119651150) + LTR81 LTR/Gypsy 1087 1182 (7) 2235323 457 31.4 11.9 1.6 chr8 27929148 27929399 (118434623) + MamGypLTR3 LTR/Gypsy 153 430 (409) 2237320 375 31.4 10.8 6.4 chr8 27930419 27930522 (118433500) C MamGypLTR3 LTR/Gypsy (233) 606 507 2237321 375 31.4 10.8 6.4 chr8 27930814 27930912 (118433110) C MamGypLTR3 LTR/Gypsy (333) 506 394 2237321 411 32.2 2.7 6.5 chr8 27930954 27931215 (118432807) C MamGypLTR3 LTR/Gypsy (541) 298 47 2237321 250 26.9 11.3 10.9 chr8 28088767 28088853 (118275169) + MamGypLTR2b LTR/Gypsy 673 750 (172) 2237554 250 26.9 11.3 10.9 chr8 28089150 28089189 (118274833) + MamGypLTR2b LTR/Gypsy 751 800 (122) 2237554 250 26.9 11.3 10.9 chr8 28089498 28089588 (118274434) + MamGypLTR2b LTR/Gypsy 801 894 (28) 2237554 662 26.1 4.9 9.2 chr8 29452144 29452538 (116911484) + LTR81AB LTR/Gypsy 39 417 (933) 2239921 276 31.4 7.1 3.9 chr8 29453181 29453362 (116910660) + LTR81AB LTR/Gypsy 846 1033 (120) 2239921 415 18.8 2.1 1.0 chr8 29453487 29453583 (116910439) + LTR81AB LTR/Gypsy 1042 1139 (14) 2239921 467 34.1 5.4 10.1 chr8 29728821 29729303 (116634719) + MamGypLTR1c LTR/Gypsy 333 792 (11) 2240350 271 31.4 5.7 8.6 chr8 29737338 29737831 (116626191) + LTR81A LTR/Gypsy 3 469 (924) 2240371 384 24.7 14.3 5.8 chr8 29738298 29738486 (116625536) + LTR81B LTR/Gypsy 1092 1296 (97) 2240372 282 30.5 18.7 4.7 chr8 29833055 29833550 (116530472) + MamGypLTR2b LTR/Gypsy 22 602 (466) 2240519 340 25.2 7.3 6.1 chr8 29833736 29833900 (116530122) + MamGypLTR1c LTR/Gypsy 634 800 (3) 2240520 282 33.2 9.7 7.6 chr8 29871230 29871519 (116492503) C MamGypLTR1b LTR/Gypsy (33) 749 454 2240590 247 36.0 5.3 3.5 chr8 30130801 30130970 (116233052) + MamGypLTR2b LTR/Gypsy 14 186 (736) 2241150 333 25.4 4.9 6.6 chr8 30775986 30776107 (115587915) + MamGypLTR3 LTR/Gypsy 597 716 (123) 2242357 267 28.7 0.8 7.3 chr8 31040328 31040405 (115323617) C MamGypLTR2b LTR/Gypsy (1) 921 847 2242821 267 28.7 0.8 7.3 chr8 31040710 31040754 (115323268) C MamGypLTR2b LTR/Gypsy (76) 846 806 2242821 273 32.8 3.4 0.8 chr8 31041436 31041552 (115322470) C MamGypLTR2b LTR/Gypsy (301) 621 502 2242821 231 33.9 6.2 3.9 chr8 31177319 31177496 (115186526) C MamGypLTR2b LTR/Gypsy (597) 325 144 2243051 405 28.7 4.3 5.4 chr8 31870395 31870578 (114493444) + LTR81A LTR/Gypsy 40 221 (1129) 2243945 228 33.3 7.6 2.1 chr8 31871157 31871300 (114492722) + LTR81A LTR/Gypsy 790 941 (248) 2243945 449 30.1 8.5 4.8 chr8 32690172 32690443 (113673579) C LTR81A LTR/Gypsy (83) 1267 986 2245149 957 27.0 4.6 2.3 chr8 32744235 32744579 (113619443) C LTR81A LTR/Gypsy (975) 375 23 2245211 801 30.5 6.4 5.6 chr8 32763628 32764020 (113600002) C MamGypLTR2c LTR/Gypsy (3) 1065 670 2245243 311 30.8 2.0 4.7 chr8 32947657 32947806 (113416216) + MamGypLTR3 LTR/Gypsy 490 635 (204) 2245460 286 29.4 7.0 6.9 chr8 32967204 32967484 (113396538) + LTR81A LTR/Gypsy 751 1064 (286) 2245485 345 33.7 7.6 9.8 chr8 33155316 33155917 (113208105) + MamGypLTR1c LTR/Gypsy 62 650 (153) 2245772 341 22.1 20.7 6.1 chr8 33284012 33284257 (113079765) C LTR81B LTR/Gypsy (14) 1379 894 2245998 540 28.9 12.2 5.1 chr8 33285657 33286049 (113077973) C LTR81B LTR/Gypsy (911) 482 62 2245998 782 24.8 12.1 2.8 chr8 33560841 33561089 (112802933) C MamGypLTR1b LTR/Gypsy (0) 782 511 2246618 323 38.0 0.0 0.9 chr8 34256997 34257110 (112106912) + MamGypLTR1b LTR/Gypsy 409 521 (261) 2247585 231 18.5 3.7 0.0 chr8 35060632 35060685 (111303337) C MamGypLTR1a LTR/Gypsy (2) 782 727 2248729 333 39.4 3.9 1.9 chr8 36047853 36048059 (110315963) C MamGypLTR1b LTR/Gypsy (178) 604 394 2249958 393 28.6 14.2 2.1 chr8 36060784 36061022 (110303000) + LTR81B LTR/Gypsy 1047 1314 (79) 2249967 370 29.4 9.3 5.1 chr8 36066139 36066353 (110297669) C MamGypLTR1c LTR/Gypsy (476) 327 104 2249975 250 29.9 9.5 3.0 chr8 36363391 36363559 (110000463) C MamGypLTR1c LTR/Gypsy (607) 196 17 2250397 249 27.7 1.7 2.6 chr8 36441529 36441643 (109922379) C LTR81C LTR/Gypsy (2) 1348 1235 2250500 597 35.5 7.4 2.6 chr8 36443086 36443719 (109920303) C LTR81C LTR/Gypsy (192) 1201 342 2250500 263 18.5 1.9 0.0 chr8 36444006 36444059 (109919963) C LTR81B LTR/Gypsy (1190) 203 149 2250502 438 24.2 3.1 5.8 chr8 36703874 36704040 (109659982) C MamGypLTR2c LTR/Gypsy (14) 1139 894 2250870 258 27.4 6.7 8.5 chr8 36704325 36704379 (109659643) C MamGypLTR2c LTR/Gypsy (186) 967 921 2250870 298 33.0 6.7 1.9 chr8 36715796 36716005 (109648017) C LTR81A LTR/Gypsy (1130) 220 1 2250883 291 23.6 6.6 2.2 chr8 37034029 37034119 (109329903) + LTR81C LTR/Gypsy 1052 1146 (7) 2251310 271 21.0 7.4 7.4 chr8 38013890 38013997 (108350025) + MamGypLTR1a LTR/Gypsy 26 133 (651) 2253062 861 27.4 14.4 0.9 chr8 38543092 38543437 (107820585) C LTR81B LTR/Gypsy (76) 1113 721 2254034 976 26.3 10.6 5.3 chr8 38543945 38544437 (107819585) C LTR81B LTR/Gypsy (865) 528 10 2254034 250 22.2 0.0 0.0 chr8 39880072 39880116 (106483906) C MamGypLTR2b LTR/Gypsy (72) 850 806 2255974 263 27.3 9.8 1.6 chr8 40250815 40250937 (106113085) + MamGypLTR1d LTR/Gypsy 681 813 (0) 2256575 235 18.4 0.0 0.0 chr8 40350622 40350659 (106013363) + MamGypLTR1c LTR/Gypsy 751 788 (15) 2256738 226 31.9 7.0 1.4 chr8 40490604 40490746 (105873276) + LTR81A LTR/Gypsy 105 255 (1095) 2256937 498 26.2 22.7 5.0 chr8 40811739 40812263 (105551759) C MamGypLTR1b LTR/Gypsy (2) 780 163 2257390 378 18.8 4.7 0.0 chr8 41013455 41013539 (105350483) C MamGypLTR1a LTR/Gypsy (8) 776 688 2257728 468 31.2 1.7 2.6 chr8 41049749 41049978 (105314044) C LTR81B LTR/Gypsy (1062) 331 104 2257805 226 13.7 1.8 10.5 chr8 41942826 41942882 (104421140) + MamGypLTR3 LTR/Gypsy 578 629 (210) 2259275 587 20.6 10.2 1.2 chr8 42522051 42522217 (103841805) + LTR81A LTR/Gypsy 1 182 (1168) 2260360 464 27.4 10.1 9.8 chr8 42526930 42527110 (103836912) + LTR81C LTR/Gypsy 849 1026 (163) 2260369 464 26.3 9.6 10.0 chr8 42527403 42527546 (103836476) + LTR81C LTR/Gypsy 1013 1143 (10) 2260369 584 33.1 8.6 5.1 chr8 42550511 42551080 (103812942) + MamGypLTR1a LTR/Gypsy 173 762 (22) 2260417 477 35.7 3.6 5.3 chr8 43157531 43157867 (103206155) C MamGypLTR3 LTR/Gypsy (30) 809 479 2261493 650 28.0 15.6 5.2 chr8 47875892 47876275 (98487747) + LTR81A LTR/Gypsy 927 1350 (0) 2262399 463 22.9 4.7 1.8 chr8 49276253 49276405 (97087617) + LTR81B LTR/Gypsy 1254 1366 (27) 2264279 345 21.9 15.8 6.3 chr8 49499195 49499233 (96864789) + LTR81B LTR/Gypsy 204 236 (1157) 2264506 345 21.9 15.8 6.3 chr8 49499275 49499361 (96864661) + LTR81B LTR/Gypsy 237 342 (1051) 2264506 251 13.3 9.7 3.2 chr8 49499815 49499876 (96864146) + LTR81B LTR/Gypsy 311 376 (813) 2264506 353 33.5 3.3 7.0 chr8 50069840 50070080 (96293942) C MamGypLTR1a LTR/Gypsy (304) 480 249 2265103 327 34.6 8.3 2.8 chr8 50759717 50759969 (95604053) + MamGypLTR1b LTR/Gypsy 337 603 (179) 2265958 292 38.4 1.1 1.6 chr8 52031088 52031275 (94332747) + LTR81C LTR/Gypsy 38 224 (929) 2267478 255 40.5 4.9 0.4 chr8 52701352 52701577 (93662445) C MamGypLTR3 LTR/Gypsy (379) 460 225 2268345 274 24.7 0.9 12.3 chr8 52818604 52818709 (93545313) + MamGypLTR1a LTR/Gypsy 52 145 (668) 2268500 690 34.6 7.9 2.5 chr8 52818757 52819219 (93544803) + MamGypLTR1a LTR/Gypsy 327 787 (16) 2268500 278 20.0 0.0 3.5 chr8 52911792 52911848 (93452174) + MamGypLTR2c LTR/Gypsy 937 991 (77) 2268671 420 26.8 9.0 2.1 chr8 53200256 53200400 (93163622) + MamGypLTR1d LTR/Gypsy 658 812 (1) 2269037 461 27.6 1.7 4.0 chr8 54493816 54493989 (91870033) C MamGypLTR1c LTR/Gypsy (2) 801 632 2270754 400 34.9 0.0 0.7 chr8 54494083 54494229 (91869793) C MamGypLTR1c LTR/Gypsy (578) 225 80 2270754 235 21.9 14.6 0.0 chr8 54578928 54579023 (91784999) + MamGypLTR2b LTR/Gypsy 796 905 (17) 2270840 244 31.1 1.9 4.6 chr8 55397878 55397985 (90966037) + MamGypLTR3 LTR/Gypsy 660 764 (75) 2272207 290 19.3 15.7 0.0 chr8 55400484 55400566 (90963456) C MamGypLTR2c LTR/Gypsy (152) 916 821 2272209 876 33.2 5.3 4.4 chr8 55613152 55613583 (90750439) C MamGypLTR1b LTR/Gypsy (6) 776 341 2272495 367 35.0 8.2 6.7 chr8 55628986 55629427 (90734595) C LTR81C LTR/Gypsy (314) 839 402 2272515 406 31.1 11.4 4.8 chr8 55759140 55759412 (90604610) C MamGypLTR2c LTR/Gypsy (94) 974 684 2272685 359 34.2 0.8 0.0 chr8 55786772 55786891 (90577131) C MamGypLTR1d LTR/Gypsy (2) 811 691 2272738 328 35.2 5.2 7.5 chr8 55787216 55787522 (90576500) C MamGypLTR1d LTR/Gypsy (326) 458 159 2272738 252 24.4 8.0 4.4 chr8 56150336 56150472 (90213550) C MamGypLTR1d LTR/Gypsy (30) 783 642 2273173 1189 31.5 9.4 6.6 chr8 57044680 57045554 (89318468) C MamGyp-int LTR/Gypsy (1874) 3188 2290 2274595 396 25.7 4.3 2.2 chr8 57314929 57315067 (89048955) C MamGypLTR2c LTR/Gypsy (55) 1013 872 2274899 233 32.8 4.3 2.6 chr8 57450009 57450124 (88913898) + LTR81A LTR/Gypsy 39 156 (1033) 2275081 258 32.0 2.5 6.8 chr8 57450927 57451087 (88912935) + LTR81A LTR/Gypsy 1196 1349 (1) 2275081 269 30.1 4.2 7.6 chr8 57626286 57626522 (88737500) C MamGypLTR2c LTR/Gypsy (29) 1039 811 2275319 228 29.5 6.4 5.1 chr8 57626973 57627129 (88736893) C LTR81C LTR/Gypsy (981) 172 14 2275320 469 21.5 12.6 2.3 chr8 57669575 57669764 (88694258) + LTR81B LTR/Gypsy 139 336 (1057) 2275380 234 36.1 5.1 3.4 chr8 57669765 57669939 (88694083) + LTR81B LTR/Gypsy 294 471 (922) 2275380 296 27.5 2.8 2.1 chr8 57784730 57784870 (88579152) C LTR81A LTR/Gypsy (1202) 148 7 2275506 340 29.1 5.2 2.6 chr8 57822595 57822749 (88541273) C MamGypLTR1c LTR/Gypsy (592) 211 53 2275551 228 34.6 9.0 4.7 chr8 57847861 57848261 (88515761) + MamGypLTR2c LTR/Gypsy 452 869 (199) 2275590 337 32.3 6.8 10.2 chr8 58200865 58201188 (88162834) C MamGypLTR3 LTR/Gypsy (30) 809 497 2276058 284 26.8 2.1 5.9 chr8 58296575 58296689 (88067333) + MamGypLTR1c LTR/Gypsy 84 195 (618) 2276192 887 22.9 15.1 2.5 chr8 58307093 58307410 (88056612) C MamGypLTR2c LTR/Gypsy (7) 1061 704 2276211 357 29.2 6.2 0.6 chr8 58553869 58554030 (87809992) C MamGypLTR2b LTR/Gypsy (0) 922 752 2276556 242 33.5 9.0 5.7 chr8 58560192 58560435 (87803587) C MamGypLTR2b LTR/Gypsy (587) 335 84 2276560 359 25.9 7.1 0.8 chr8 58636283 58636492 (87727530) + LTR81A LTR/Gypsy 6 317 (1033) 2276649 231 36.9 8.7 1.2 chr8 58727048 58727220 (87636802) + MamGypLTR1d LTR/Gypsy 365 550 (234) 2276755 251 24.7 12.8 1.1 chr8 58727303 58727396 (87636626) + MamGypLTR1d LTR/Gypsy 708 812 (1) 2276755 1258 27.3 5.5 2.6 chr8 58789797 58790252 (87573770) + LTR81B LTR/Gypsy 1 469 (924) 2276833 256 29.5 8.6 1.1 chr8 59184668 59184842 (87179180) + LTR81A LTR/Gypsy 806 993 (357) 2277347 405 31.7 4.3 12.3 chr8 59427630 59427711 (86936311) + MamGypLTR3 LTR/Gypsy 483 550 (289) 2277684 405 31.7 4.3 12.3 chr8 59428551 59428791 (86935231) + MamGypLTR3 LTR/Gypsy 551 780 (59) 2277684 250 26.5 1.4 4.2 chr8 60430375 60430445 (85933577) + LTR81B LTR/Gypsy 440 508 (885) 2278936 240 24.6 6.0 6.0 chr8 60499760 60499876 (85864146) + MamGypLTR1b LTR/Gypsy 631 747 (35) 2279017 588 28.5 3.4 6.8 chr8 61942812 61943048 (84420974) + MamGypLTR2c LTR/Gypsy 810 1038 (30) 2280960 259 31.6 4.2 0.8 chr8 62191552 62191669 (84172353) + MamGypLTR3 LTR/Gypsy 563 684 (155) 2281302 240 30.7 0.0 2.2 chr8 62797549 62797638 (83566384) + LTR81C LTR/Gypsy 1004 1091 (62) 2282093 256 29.6 3.7 0.0 chr8 63022085 63022192 (83341830) + MamGypLTR2b LTR/Gypsy 694 805 (117) 2282364 459 28.5 6.3 8.8 chr8 63573939 63574337 (82789685) C LTR81A LTR/Gypsy (41) 1309 954 2283031 524 28.4 8.4 2.4 chr8 63600319 63600531 (82763491) C MamGypLTR1d LTR/Gypsy (548) 265 40 2283067 297 27.0 8.0 0.0 chr8 64038387 64038486 (82325536) C MamGypLTR1c LTR/Gypsy (12) 791 684 2283624 377 34.1 6.0 5.5 chr8 64209485 64209869 (82154153) C MamGypLTR1c LTR/Gypsy (225) 578 192 2283904 281 20.3 1.7 0.0 chr8 64210207 64210265 (82153757) C MamGypLTR1c LTR/Gypsy (614) 199 140 2283904 263 30.3 6.2 3.5 chr8 64227202 64227542 (82136480) C MamGypLTR1d LTR/Gypsy (18) 795 498 2283937 419 21.3 8.7 2.2 chr8 64272220 64272397 (82091625) C LTR81C LTR/Gypsy (154) 1196 878 2283987 398 37.2 7.9 5.2 chr8 64272457 64272876 (82091146) C LTR81C LTR/Gypsy (453) 897 467 2283987 687 30.2 12.5 9.7 chr8 64345520 64346197 (82017825) + LTR81B LTR/Gypsy 3 699 (694) 2284089 323 30.3 1.0 16.2 chr8 64346718 64346914 (82017108) + LTR81B LTR/Gypsy 993 1159 (191) 2284089 238 34.4 2.0 4.0 chr8 64626199 64626298 (81737724) + MamGypLTR3 LTR/Gypsy 268 365 (474) 2284414 231 27.5 16.2 6.8 chr8 64681994 64682141 (81681881) + MamGypLTR2b LTR/Gypsy 255 416 (506) 2284465 599 24.8 8.9 2.0 chr8 65542691 65542892 (80821130) + MamGypLTR2c LTR/Gypsy 822 1037 (31) 2285510 629 25.0 4.1 2.0 chr8 65545483 65545678 (80818344) + MamGypLTR2c LTR/Gypsy 838 1037 (31) 2285514 374 28.6 3.2 7.3 chr8 66170771 66170810 (80193212) + MamGypLTR3 LTR/Gypsy 600 635 (204) 2286332 374 28.6 3.2 7.3 chr8 66171144 66171321 (80192701) + MamGypLTR3 LTR/Gypsy 636 809 (30) 2286332 318 27.4 10.1 1.4 chr8 66845693 66845840 (79518182) + MamGypLTR1b LTR/Gypsy 622 782 (0) 2287404 383 26.5 11.5 13.3 chr8 67706717 67707108 (78656914) C LTR81B LTR/Gypsy (43) 1350 966 2288865 243 25.8 19.6 0.0 chr8 67842068 67842164 (78521858) C LTR81AB LTR/Gypsy (12) 266 151 2289141 314 24.2 4.2 8.4 chr8 67853651 67853817 (78510205) C LTR81A LTR/Gypsy (1020) 330 171 2289172 270 33.1 8.7 9.3 chr8 68800528 68800837 (77563185) C MamGypLTR2b LTR/Gypsy (594) 328 21 2290676 828 32.7 16.3 6.4 chr8 69502580 69503568 (76860454) + LTR81A LTR/Gypsy 232 1318 (32) 2291603 348 27.4 5.9 10.2 chr8 69531712 69531967 (76832055) + LTR81AB LTR/Gypsy 5 249 (29) 2291635 268 27.6 13.1 1.9 chr8 69532738 69532844 (76831178) + LTR81AB LTR/Gypsy 823 941 (248) 2291635 302 30.1 8.1 0.0 chr8 69533001 69533123 (76830899) + LTR81AB LTR/Gypsy 998 1130 (23) 2291635 245 35.9 8.5 6.6 chr8 69992967 69993171 (76370851) + MamGypLTR3 LTR/Gypsy 332 549 (290) 2292253 245 35.9 8.5 6.6 chr8 69993539 69993815 (76370207) + MamGypLTR3 LTR/Gypsy 550 822 (17) 2292253 233 38.8 1.6 0.5 chr8 70199632 70199815 (76164207) + MamGypLTR1b LTR/Gypsy 329 514 (270) 2292501 242 38.6 0.8 2.5 chr8 70200569 70200690 (76163332) + MamGypLTR1b LTR/Gypsy 558 677 (105) 2292501 230 31.3 4.4 5.1 chr8 71676596 71676753 (74687269) C LTR81C LTR/Gypsy (852) 301 145 2294980 256 24.0 1.3 2.6 chr8 71676757 71676833 (74687189) C LTR81A LTR/Gypsy (1087) 306 231 2294981 401 27.1 10.9 7.0 chr8 71683595 71683824 (74680198) C LTR81A LTR/Gypsy (1101) 249 11 2294981 333 33.7 9.9 4.0 chr8 71896234 71896555 (74467467) C MamGypLTR1a LTR/Gypsy (16) 766 426 2295241 419 31.7 8.4 5.8 chr8 71896589 71896896 (74467126) C MamGypLTR1a LTR/Gypsy (463) 321 6 2295241 266 36.5 3.0 1.2 chr8 72291322 72291490 (74072532) + LTR81A LTR/Gypsy 768 939 (411) 2295749 351 20.2 5.8 2.3 chr8 72544961 72545046 (73818976) C LTR81B LTR/Gypsy (38) 1355 1267 2296062 787 31.4 4.0 5.2 chr8 72549832 72550240 (73813782) C LTR81B LTR/Gypsy (653) 740 118 2296070 312 23.6 11.2 10.0 chr8 72876753 72876912 (73487110) C LTR81A LTR/Gypsy (60) 1290 1129 2296481 237 29.1 7.0 5.6 chr8 73251205 73251346 (73112676) + LTR81A LTR/Gypsy 12 155 (1195) 2296934 1586 31.4 6.8 3.5 chr8 73352051 73352818 (73011204) C MamGypLTR1c LTR/Gypsy (7) 796 4 2297073 232 39.0 0.0 2.0 chr8 73380130 73380231 (72983791) + MamGypLTR1c LTR/Gypsy 338 437 (366) 2297113 407 21.2 5.0 5.0 chr8 73423277 73423395 (72940627) + LTR81C LTR/Gypsy 860 978 (175) 2297162 227 18.6 2.3 0.0 chr8 74007765 74007807 (72356215) + MamGypLTR1a LTR/Gypsy 90 133 (651) 2298017 563 28.1 13.1 3.5 chr8 75083744 75084057 (71279965) + MamGypLTR3 LTR/Gypsy 487 830 (9) 2299913 526 29.0 9.4 5.7 chr8 75249887 75250237 (71113785) + MamGypLTR2c LTR/Gypsy 673 1036 (32) 2300126 397 28.7 15.8 0.6 chr8 75322479 75322636 (71041386) + MamGypLTR2c LTR/Gypsy 827 1008 (60) 2300213 255 22.5 1.4 1.4 chr8 75806074 75806145 (70557877) + MamGypLTR2c LTR/Gypsy 394 465 (603) 2300859 434 29.7 1.7 2.2 chr8 75806633 75806811 (70557211) + MamGypLTR2c LTR/Gypsy 884 1061 (7) 2300859 434 30.1 7.2 6.6 chr8 76256331 76256641 (70107381) C LTR81B LTR/Gypsy (1043) 350 42 2301428 434 30.1 7.2 6.6 chr8 76256679 76256714 (70107308) C LTR81B LTR/Gypsy (1352) 41 1 2301428 230 29.5 0.0 6.2 chr8 76282231 76282342 (70081680) + LTR81AB LTR/Gypsy 128 232 (46) 2301456 297 37.5 3.9 0.7 chr8 76628722 76628874 (69735148) + LTR81B LTR/Gypsy 1010 1167 (226) 2301977 274 27.7 0.9 4.7 chr8 76629205 76629310 (69734712) + LTR81 LTR/Gypsy 1087 1188 (1) 2301979 236 34.9 6.8 0.0 chr8 77046312 77046443 (69317579) + MamGypLTR2b LTR/Gypsy 684 824 (98) 2302512 322 25.2 1.4 8.6 chr8 77389101 77389239 (68974783) C MamGypLTR1a LTR/Gypsy (0) 784 656 2302961 378 21.8 2.0 1.0 chr8 77781783 77781884 (68582138) C MamGypLTR2b LTR/Gypsy (20) 902 800 2303411 366 30.0 5.2 8.3 chr8 78495615 78495843 (67868179) + MamGypLTR1a LTR/Gypsy 7 228 (556) 2304381 248 26.3 3.2 5.6 chr8 78900410 78900534 (67463488) + LTR81B LTR/Gypsy 27 152 (1241) 2304811 255 35.0 2.0 6.7 chr8 78969623 78969772 (67394250) + LTR81A LTR/Gypsy 865 1007 (343) 2304895 509 35.3 9.2 4.7 chr8 79410786 79411341 (66952681) + MamGypLTR3 LTR/Gypsy 248 828 (11) 2305502 231 37.1 1.9 2.4 chr8 79985656 79985865 (66378157) C MamGypLTR2c LTR/Gypsy (24) 1044 836 2306207 291 18.6 2.8 1.4 chr8 80081646 80081716 (66282306) C MamGypLTR1a LTR/Gypsy (23) 759 688 2306341 333 37.7 6.9 4.8 chr8 80081802 80082177 (66281845) C MamGypLTR1a LTR/Gypsy (236) 548 165 2306341 302 27.5 15.5 5.3 chr8 80153704 80153987 (66210035) C LTR81A LTR/Gypsy (1019) 331 19 2306437 266 35.9 1.6 0.0 chr8 80204374 80204501 (66159521) C LTR81A LTR/Gypsy (657) 693 564 2306503 567 26.8 2.7 2.1 chr8 80229872 80230058 (66133964) C LTR81B LTR/Gypsy (12) 1381 1194 2306543 241 30.2 11.4 1.7 chr8 80230444 80230618 (66133404) C LTR81B LTR/Gypsy (1145) 248 57 2306543 227 31.9 7.5 3.2 chr8 80274379 80274472 (66089550) C MamGypLTR2c LTR/Gypsy (153) 769 672 2306607 242 39.6 2.2 0.0 chr8 80274880 80274970 (66089052) C MamGypLTR2c LTR/Gypsy (701) 367 275 2306607 300 29.0 18.8 0.6 chr8 80315220 80315389 (66048633) C MamGypLTR1d LTR/Gypsy (0) 813 613 2306650 331 26.0 3.1 4.0 chr8 80315710 80315844 (66048178) C MamGypLTR1d LTR/Gypsy (367) 446 332 2306650 538 26.6 14.2 5.5 chr8 80372611 80372884 (65991138) C LTR81B LTR/Gypsy (6) 1387 1090 2306736 542 26.3 6.6 5.3 chr8 80373530 80373830 (65990192) C LTR81B LTR/Gypsy (1081) 312 8 2306736 342 27.5 13.9 1.2 chr8 80769870 80770042 (65593980) C LTR81B LTR/Gypsy (1) 1392 1198 2307347 446 26.6 0.8 1.6 chr8 82493587 82493712 (63870310) + MamGypLTR1b LTR/Gypsy 617 741 (41) 2310121 243 29.7 8.5 4.7 chr8 82545338 82545443 (63818579) C MamGypLTR3 LTR/Gypsy (97) 742 633 2310198 360 33.3 4.3 6.5 chr8 82968438 82968575 (63395447) + LTR81A LTR/Gypsy 367 477 (873) 2310811 238 25.7 11.6 2.0 chr8 83017370 83017516 (63346506) C MamGypLTR2c LTR/Gypsy (38) 1030 870 2310880 282 26.0 0.0 5.9 chr8 83089602 83089703 (63274319) C LTR81B LTR/Gypsy (0) 1153 1058 2310977 662 30.8 7.5 5.7 chr8 83090029 83090466 (63273556) C LTR81B LTR/Gypsy (926) 467 22 2310977 295 27.5 18.5 7.1 chr8 83293631 83293814 (63070208) C LTR81C LTR/Gypsy (126) 1027 823 2311255 265 37.6 2.6 1.6 chr8 84080914 84081102 (62282920) C MamGypLTR2c LTR/Gypsy (586) 482 292 2312303 510 39.8 2.9 4.0 chr8 84197942 84198318 (62165704) C MamGypLTR1c LTR/Gypsy (20) 783 411 2312441 263 21.6 4.9 8.6 chr8 84568808 84568888 (61795134) C MamGypLTR2c LTR/Gypsy (590) 478 401 2312878 301 24.7 13.0 6.0 chr8 84569077 84569323 (61794699) C LTR81A LTR/Gypsy (987) 363 100 2312879 400 34.0 13.5 5.2 chr8 84580128 84580619 (61783403) C MamGypLTR1a LTR/Gypsy (0) 784 250 2312893 227 21.2 16.1 1.2 chr8 84777996 84778076 (61585946) C MamGypLTR2c LTR/Gypsy (19) 1049 957 2313172 305 34.6 0.8 1.6 chr8 84849711 84849839 (61514183) C MamGypLTR3 LTR/Gypsy (0) 839 712 2313236 339 27.5 0.9 3.8 chr8 85292631 85292736 (61071286) + LTR81B LTR/Gypsy 265 367 (1026) 2313874 306 34.6 6.7 1.8 chr8 85400449 85400613 (60963409) C MamGypLTR3 LTR/Gypsy (8) 831 659 2314032 243 27.9 2.8 4.6 chr8 85657747 85657855 (60706167) C LTR81A LTR/Gypsy (9) 1144 1038 2314372 915 25.6 4.9 3.6 chr8 85658020 85658493 (60705529) C LTR81A LTR/Gypsy (996) 397 1 2314372 240 28.6 9.8 8.2 chr8 85680377 85680498 (60683524) C MamGypLTR1c LTR/Gypsy (186) 617 494 2314396 245 29.2 4.9 4.2 chr8 85859157 85859299 (60504723) + MamGypLTR2b LTR/Gypsy 767 910 (12) 2314621 272 36.0 1.7 0.9 chr8 86137384 86137498 (60226524) + MamGypLTR1b LTR/Gypsy 451 566 (216) 2315015 254 28.1 2.9 8.6 chr8 86396563 86396702 (59967320) C LTR81C LTR/Gypsy (59) 1094 963 2315413 325 32.6 10.6 2.2 chr8 86396757 86396935 (59967087) C LTR81C LTR/Gypsy (312) 1038 845 2315414 509 33.6 5.0 4.2 chr8 86397098 86397380 (59966642) C LTR81C LTR/Gypsy (868) 285 1 2315414 411 20.3 0.4 4.2 chr8 86456422 86456535 (59907487) C MamGypLTR2b LTR/Gypsy (52) 870 669 2315506 430 25.4 5.4 7.8 chr8 87267582 87267786 (59096236) + MamGypLTR2b LTR/Gypsy 671 870 (52) 2316517 545 26.4 3.3 3.4 chr8 87272080 87272285 (59091737) C MamGypLTR2c LTR/Gypsy (2) 1066 695 2316522 303 31.1 3.5 4.3 chr8 87274537 87274677 (59089345) C MamGypLTR2c LTR/Gypsy (926) 142 3 2316528 300 29.3 4.8 3.2 chr8 87318529 87318715 (59045307) C MamGypLTR2c LTR/Gypsy (30) 1038 849 2316597 535 29.6 3.4 1.4 chr8 87928192 87928338 (58435684) + LTR81A LTR/Gypsy 1 150 (1003) 2317537 717 32.2 14.5 4.0 chr8 87929600 87930274 (58433748) + LTR81A LTR/Gypsy 603 1348 (2) 2317537 453 31.2 12.2 4.3 chr8 88055989 88056365 (58307657) C LTR81B LTR/Gypsy (820) 573 166 2317690 393 26.7 2.0 0.0 chr8 88208553 88208653 (58155369) + LTR81B LTR/Gypsy 1273 1375 (18) 2317880 373 31.2 15.9 2.9 chr8 88208835 88209180 (58154842) + MamGypLTR2b LTR/Gypsy 512 902 (20) 2317881 332 36.5 2.2 5.3 chr8 88492949 88493174 (57870848) + MamGypLTR1a LTR/Gypsy 210 428 (356) 2318194 318 35.9 6.7 1.2 chr8 88493355 88493594 (57870428) + MamGypLTR1a LTR/Gypsy 489 741 (41) 2318194 258 27.9 16.4 0.0 chr8 88971197 88971318 (57392704) + MamGypLTR1b LTR/Gypsy 641 782 (0) 2318811 450 23.6 17.7 5.5 chr8 89716613 89716832 (56647190) + LTR81 LTR/Gypsy 880 1126 (63) 2319755 437 31.5 13.4 6.1 chr8 90862827 90863073 (55500949) C MamGypLTR1c LTR/Gypsy (75) 728 464 2321203 375 32.4 9.6 7.4 chr8 91009863 91010229 (55353793) C MamGypLTR1b LTR/Gypsy (7) 796 398 2321429 262 31.2 1.2 0.0 chr8 91298769 91298848 (55065174) C LTR81C LTR/Gypsy (1009) 144 64 2321806 318 28.3 3.7 0.9 chr8 91448808 91448914 (54915108) + MamGypLTR1c LTR/Gypsy 52 161 (642) 2321976 285 35.3 10.3 4.1 chr8 91449139 91449333 (54914689) + MamGypLTR1c LTR/Gypsy 402 608 (205) 2321976 459 31.5 14.5 4.9 chr8 91557672 91557890 (54806132) C MamGypLTR1c LTR/Gypsy (90) 713 467 2322130 459 31.5 14.5 4.9 chr8 91558419 91558580 (54805442) C MamGypLTR1c LTR/Gypsy (337) 466 289 2322130 459 31.5 14.5 4.9 chr8 91558885 91558908 (54805114) C MamGypLTR1c LTR/Gypsy (515) 288 268 2322130 470 28.9 8.0 4.2 chr8 91856226 91856438 (54507584) C MamGypLTR1c LTR/Gypsy (5) 798 578 2322502 351 28.8 11.0 4.6 chr8 92220719 92221046 (54142976) C MamGypLTR2b LTR/Gypsy (7) 915 567 2323027 429 25.9 4.8 8.2 chr8 92402193 92402338 (53961684) C MamGypLTR2c LTR/Gypsy (32) 1036 898 2323258 429 25.9 4.8 8.2 chr8 92402635 92402693 (53961329) C MamGypLTR2c LTR/Gypsy (171) 897 838 2323258 274 27.1 9.8 6.5 chr8 92546935 92547077 (53816945) + LTR81A LTR/Gypsy 58 202 (1148) 2323433 226 32.3 1.0 6.8 chr8 92548052 92548154 (53815868) + MamGypLTR2b LTR/Gypsy 483 579 (343) 2323435 316 24.3 7.1 4.5 chr8 92548265 92548376 (53815646) + MamGypLTR2b LTR/Gypsy 808 922 (0) 2323435 228 25.8 6.2 4.1 chr8 92772412 92772508 (53591514) + LTR81C LTR/Gypsy 578 676 (477) 2323714 229 33.9 9.8 0.0 chr8 93125919 93126030 (53237992) C MamGypLTR1a LTR/Gypsy (149) 635 513 2324184 989 30.3 10.9 4.5 chr8 94605394 94605544 (51758478) C MamGypLTR1b LTR/Gypsy (0) 782 636 2326154 989 30.3 10.9 4.5 chr8 94605998 94606443 (51757579) C MamGypLTR1b LTR/Gypsy (147) 635 147 2326154 243 33.9 0.0 0.0 chr8 94902648 94902712 (51461310) C LTR81A LTR/Gypsy (569) 781 717 2326713 263 34.2 8.0 5.1 chr8 94985346 94985582 (51378440) + MamGypLTR3 LTR/Gypsy 588 831 (8) 2326821 588 29.6 5.5 1.7 chr8 94991618 94991854 (51372168) C MamGypLTR2c LTR/Gypsy (13) 1055 810 2326828 305 26.3 1.6 8.8 chr8 94992540 94992583 (51371439) C MamGypLTR2c LTR/Gypsy (947) 121 88 2326828 305 26.3 1.6 8.8 chr8 94992793 94992872 (51371150) C MamGypLTR2c LTR/Gypsy (981) 87 6 2326828 254 26.1 6.8 9.8 chr8 95090384 95090515 (51273507) C LTR81B LTR/Gypsy (78) 1315 1188 2326982 234 24.1 8.5 3.7 chr8 95091234 95091315 (51272707) C LTR81B LTR/Gypsy (1147) 246 161 2326982 228 35.9 2.0 4.0 chr8 95730476 95730626 (50633396) C LTR81A LTR/Gypsy (410) 940 793 2328104 238 23.4 0.0 3.0 chr8 95933146 95933211 (50430811) C MamGypLTR1a LTR/Gypsy (543) 241 178 2328512 533 27.8 2.8 0.6 chr8 95976084 95976264 (50387758) C MamGypLTR1a LTR/Gypsy (3) 781 597 2328589 412 27.3 15.2 4.3 chr8 95977123 95977424 (50386598) C MamGypLTR1a LTR/Gypsy (433) 370 36 2328589 535 30.5 5.2 7.2 chr8 96297662 96298007 (50066015) + MamGypLTR3 LTR/Gypsy 499 837 (2) 2329189 245 29.5 14.8 8.5 chr8 96373425 96373613 (49990409) + LTR81A LTR/Gypsy 182 382 (968) 2329307 303 22.0 5.9 7.8 chr8 96375466 96375618 (49988404) + MamGypLTR2c LTR/Gypsy 868 1017 (51) 2329310 265 21.7 6.7 0.0 chr8 96415844 96415903 (49948119) + MamGypLTR2c LTR/Gypsy 949 1012 (56) 2329367 862 32.3 8.6 3.6 chr8 96518714 96519234 (49844788) + MamGypLTR1b LTR/Gypsy 192 738 (44) 2329546 507 34.0 5.9 3.4 chr8 96559919 96560258 (49803764) + MamGypLTR2b LTR/Gypsy 1 389 (679) 2329596 249 35.6 6.2 2.2 chr8 96560412 96560589 (49803433) + MamGypLTR2b LTR/Gypsy 504 688 (234) 2329596 354 22.1 16.0 2.4 chr8 96561162 96561286 (49802736) + MamGypLTR2b LTR/Gypsy 776 917 (5) 2329596 417 35.1 4.9 9.5 chr8 96630285 96630977 (49733045) C MamGypLTR2c LTR/Gypsy (5) 1063 403 2329673 234 29.7 0.0 9.8 chr8 96630969 96631091 (49732931) C MamGypLTR2c LTR/Gypsy (97) 971 861 2329674 362 25.4 12.6 0.7 chr8 96631281 96631415 (49732607) C MamGypLTR2c LTR/Gypsy (910) 158 8 2329674 370 30.2 10.1 2.1 chr8 96674278 96674514 (49689508) C MamGypLTR1c LTR/Gypsy (540) 263 8 2329741 621 22.5 2.2 2.7 chr8 96790102 96790284 (49573738) C LTR81B LTR/Gypsy (1) 1392 1211 2329931 455 26.3 5.0 0.6 chr8 96791063 96791242 (49572780) C LTR81B LTR/Gypsy (1088) 305 118 2329931 276 15.8 10.5 0.0 chr8 96929381 96929437 (49434585) C MamGypLTR2c LTR/Gypsy (122) 946 884 2330108 545 34.1 6.2 2.8 chr8 96929886 96930241 (49433781) C MamGypLTR2c LTR/Gypsy (662) 406 39 2330109 399 33.2 1.5 5.4 chr8 97188413 97188616 (49175406) C MamGypLTR3 LTR/Gypsy (5) 834 639 2330473 304 30.6 8.2 7.1 chr8 97192681 97192947 (49171075) + MamGypLTR1b LTR/Gypsy 510 779 (3) 2330481 384 32.8 2.1 3.2 chr8 97356447 97356590 (49007432) C MamGypLTR3 LTR/Gypsy (0) 839 699 2330733 384 32.8 2.1 3.2 chr8 97356890 97356930 (49007092) C MamGypLTR3 LTR/Gypsy (141) 698 656 2330733 387 26.8 4.5 2.2 chr8 97478788 97478919 (48885103) C MamGypLTR1c LTR/Gypsy (2) 801 651 2330948 718 26.2 6.6 2.3 chr8 98035895 98036152 (48327870) C MamGypLTR3 LTR/Gypsy (0) 839 571 2331706 358 24.3 7.5 7.5 chr8 98294806 98294992 (48069030) + MamGypLTR2c LTR/Gypsy 52 238 (830) 2332054 493 35.2 13.0 3.6 chr8 98295270 98295684 (48068338) + MamGypLTR2c LTR/Gypsy 493 946 (122) 2332055 311 30.6 2.3 4.7 chr8 98429805 98430007 (47934015) + LTR81A LTR/Gypsy 293 673 (677) 2332225 687 31.2 10.6 4.2 chr8 98430762 98431259 (47932763) + LTR81C LTR/Gypsy 466 995 (158) 2332228 247 20.2 5.4 3.3 chr8 98483860 98483951 (47880071) + LTR81A LTR/Gypsy 95 188 (1001) 2332316 374 24.2 14.1 7.3 chr8 98484603 98484794 (47879228) + LTR81A LTR/Gypsy 591 795 (555) 2332316 225 23.5 3.6 2.4 chr8 98596189 98596271 (47767751) C LTR81C LTR/Gypsy (0) 1153 1070 2332481 316 33.9 9.8 7.3 chr8 99397384 99397711 (46966311) + MamGypLTR2b LTR/Gypsy 82 417 (505) 2334092 269 29.3 7.2 9.1 chr8 99397766 99398054 (46965968) + MamGypLTR2b LTR/Gypsy 545 802 (11) 2334092 274 20.3 1.7 0.0 chr8 100597182 100597240 (45766782) C LTR81A LTR/Gypsy (38) 1312 1253 2335894 401 25.4 13.8 6.0 chr8 100920987 100921204 (45442818) + MamGypLTR2c LTR/Gypsy 832 1066 (2) 2336323 311 21.6 4.0 1.3 chr8 101400955 101401029 (44962993) C MamGypLTR1b LTR/Gypsy (40) 742 666 2337131 290 35.9 3.5 1.8 chr8 101838085 101838254 (44525768) + MamGypLTR2b LTR/Gypsy 581 753 (169) 2337980 254 31.2 14.1 4.3 chr8 101854895 101855078 (44508944) C MamGypLTR1d LTR/Gypsy (14) 799 598 2338021 341 27.5 8.0 2.2 chr8 101855189 101855376 (44508646) C MamGypLTR1d LTR/Gypsy (283) 530 323 2338021 313 24.3 11.8 5.3 chr8 101858510 101858661 (44505361) C MamGypLTR1d LTR/Gypsy (588) 215 54 2338021 252 27.3 7.6 0.0 chr8 101877938 101878003 (44486019) C MamGypLTR2b LTR/Gypsy (3) 919 849 2338058 275 15.9 0.0 14.8 chr8 101878063 101878143 (44485879) C MamGypLTR2c LTR/Gypsy (878) 190 122 2338059 403 24.0 2.0 2.0 chr8 101878396 101878493 (44485529) C MamGypLTR2c LTR/Gypsy (967) 101 4 2338059 229 22.6 6.6 7.7 chr8 102066790 102066880 (44297142) C MamGypLTR2b LTR/Gypsy (26) 896 807 2338422 386 34.7 3.7 1.5 chr8 102652853 102653084 (43710938) C MamGypLTR1a LTR/Gypsy (220) 583 337 2339423 239 26.0 6.7 4.8 chr8 102768388 102768492 (43595530) + MamGypLTR3 LTR/Gypsy 163 269 (570) 2339565 738 30.3 5.7 2.1 chr8 102768678 102768957 (43595065) + MamGypLTR3 LTR/Gypsy 550 839 (0) 2339565 523 34.6 12.6 5.4 chr8 102837841 102837946 (43526076) + MamGypLTR1b LTR/Gypsy 2 112 (670) 2339666 523 34.6 12.6 5.4 chr8 102838178 102838571 (43525451) + MamGypLTR1b LTR/Gypsy 113 538 (244) 2339666 386 32.0 15.1 0.8 chr8 103590099 103590350 (42773672) + MamGypLTR1b LTR/Gypsy 99 386 (396) 2340924 378 32.5 3.7 1.2 chr8 103590368 103590529 (42773493) + MamGypLTR1b LTR/Gypsy 550 715 (67) 2340924 294 30.9 3.0 8.4 chr8 103945240 103945405 (42418617) C MamGypLTR3 LTR/Gypsy (239) 600 444 2341646 428 28.0 8.1 10.6 chr8 104257295 104257614 (42106408) C MamGypLTR1c LTR/Gypsy (0) 803 492 2342210 1126 31.5 14.7 5.1 chr8 104266340 104267168 (42096854) + MamGypLTR2b LTR/Gypsy 10 918 (4) 2342228 227 20.0 1.8 0.0 chr8 104772276 104772330 (41591692) + LTR81 LTR/Gypsy 1092 1147 (42) 2342907 238 27.1 10.4 0.0 chr8 105776643 105776738 (40587284) + LTR81A LTR/Gypsy 82 187 (1163) 2344374 378 34.9 8.8 7.5 chr8 105932521 105933096 (40430926) + MamGypLTR2b LTR/Gypsy 254 837 (85) 2344608 646 29.0 5.8 0.0 chr8 105943402 105943608 (40420414) + MamGypLTR1a LTR/Gypsy 7 225 (559) 2344620 261 32.4 9.3 2.0 chr8 105987223 105987373 (40376649) + MamGypLTR1b LTR/Gypsy 580 741 (41) 2344670 302 36.6 2.9 5.4 chr8 106072245 106072484 (40291538) + MamGypLTR2c LTR/Gypsy 12 391 (677) 2344799 466 27.9 16.7 5.6 chr8 106238484 106238843 (40125179) + LTR81B LTR/Gypsy 112 511 (882) 2345018 254 30.6 10.1 4.8 chr8 106239227 106239494 (40124528) + LTR81B LTR/Gypsy 1051 1332 (18) 2345018 260 35.0 5.7 0.8 chr8 106251151 106251274 (40112748) C MamGyp-int LTR/Gypsy (992) 4070 3941 2345035 2772 31.5 4.7 2.5 chr8 106251350 106252339 (40111683) C MamGyp-int LTR/Gypsy (1234) 3828 2818 2345035 1361 32.3 7.9 3.1 chr8 106252404 106253087 (40110935) C MamGyp-int LTR/Gypsy (2535) 2527 1811 2345035 271 29.2 7.9 0.0 chr8 106253230 106253318 (40110704) C MamGyp-int LTR/Gypsy (3418) 1644 1549 2345035 290 13.6 0.0 2.2 chr8 106255664 106255708 (40108314) + LTR81A LTR/Gypsy 1305 1348 (2) 2345042 373 28.7 5.3 0.7 chr8 106824158 106824308 (39539714) + MamGypLTR1b LTR/Gypsy 625 782 (0) 2345778 254 32.7 11.4 3.8 chr8 107254655 107254918 (39109104) + MamGypLTR1b LTR/Gypsy 496 779 (3) 2346384 277 31.5 12.6 4.8 chr8 107404109 107404315 (38959707) + MamGypLTR1a LTR/Gypsy 315 537 (247) 2346594 510 31.7 10.7 1.9 chr8 107507641 107507910 (38856112) + MamGypLTR1a LTR/Gypsy 1 294 (490) 2346762 834 25.5 11.7 10.5 chr8 107508962 107509372 (38854650) + MamGypLTR1a LTR/Gypsy 367 782 (2) 2346762 281 20.6 16.3 0.0 chr8 107858648 107858739 (38505283) + MamGypLTR2c LTR/Gypsy 932 1038 (30) 2347303 239 26.0 6.8 3.8 chr8 108158708 108158839 (38205183) C MamGypLTR2b LTR/Gypsy (41) 881 746 2347689 251 26.4 12.8 3.4 chr8 108179987 108180135 (38183887) C LTR81A LTR/Gypsy (1163) 187 25 2347717 396 28.4 11.7 1.0 chr8 108249085 108249290 (38114732) + MamGypLTR1a LTR/Gypsy 1 228 (554) 2347809 416 32.5 7.5 4.4 chr8 108249697 108249957 (38114065) + MamGypLTR1a LTR/Gypsy 450 722 (62) 2347809 416 32.5 7.5 4.4 chr8 108250257 108250313 (38113709) + MamGypLTR1a LTR/Gypsy 723 778 (6) 2347809 312 31.0 2.2 5.2 chr8 108671458 108671593 (37692429) + MamGypLTR1c LTR/Gypsy 669 800 (3) 2348395 483 31.5 9.7 3.0 chr8 108793149 108793678 (37570344) C MamGypLTR1b LTR/Gypsy (0) 782 89 2348568 226 30.3 12.4 10.1 chr8 108816931 108817064 (37546958) C MamGypLTR1a LTR/Gypsy (40) 744 622 2348599 226 30.3 12.4 10.1 chr8 108817398 108817479 (37546543) C MamGypLTR1a LTR/Gypsy (163) 621 523 2348599 237 31.5 10.8 4.3 chr8 109022599 109022784 (37341238) + MamGypLTR2b LTR/Gypsy 215 412 (510) 2348874 462 28.6 6.3 4.2 chr8 109133135 109133324 (37230698) + MamGypLTR1a LTR/Gypsy 36 229 (555) 2349010 278 24.1 6.6 7.4 chr8 109418372 109418492 (36945530) + LTR81A LTR/Gypsy 52 171 (1179) 2349449 321 7.1 0.0 0.0 chr8 109447094 109447135 (36916887) + MamGypLTR1d LTR/Gypsy 769 810 (3) 2349504 544 27.8 18.1 6.0 chr8 109611792 109612119 (36751903) + MamGypLTR2c LTR/Gypsy 694 1061 (7) 2349724 333 31.3 10.6 1.7 chr8 109655643 109655821 (36708201) + MamGypLTR1a LTR/Gypsy 6 200 (584) 2349797 472 37.6 7.9 4.3 chr8 109657755 109658224 (36705798) + MamGypLTR1a LTR/Gypsy 294 780 (4) 2349797 575 37.4 4.8 2.0 chr8 109681112 109681403 (36682619) C MamGypLTR1a LTR/Gypsy (195) 589 290 2349835 352 26.8 5.9 11.8 chr8 109836436 109836621 (36527401) + MamGypLTR3 LTR/Gypsy 480 654 (185) 2350057 243 24.5 0.0 0.0 chr8 109837075 109837123 (36526899) + MamGypLTR3 LTR/Gypsy 791 839 (0) 2350057 802 31.9 17.8 4.8 chr8 110175775 110176613 (36187409) + MamGypLTR2c LTR/Gypsy 26 973 (95) 2350579 421 33.1 11.4 6.3 chr8 110531357 110531769 (35832253) C LTR81C LTR/Gypsy (34) 1119 686 2351070 811 33.1 10.6 5.2 chr8 110532783 110533376 (35830646) + LTR81C LTR/Gypsy 470 1195 (155) 2351073 242 22.9 0.0 0.0 chr8 110533475 110533522 (35830500) C LTR81B LTR/Gypsy (1081) 312 265 2351074 244 28.4 3.1 3.1 chr8 110815258 110815355 (35548667) C MamGypLTR1b LTR/Gypsy (36) 746 649 2351461 247 29.5 15.3 3.7 chr8 110997025 110997214 (35366808) C LTR81B LTR/Gypsy (73) 1320 1109 2351690 268 29.1 8.1 6.6 chr8 110997548 110997683 (35366339) C LTR81B LTR/Gypsy (744) 649 512 2351690 265 26.7 19.1 0.0 chr8 111530357 111530461 (34833561) C MamGypLTR2b LTR/Gypsy (28) 894 770 2352432 431 31.0 14.6 3.2 chr8 111686101 111686320 (34677702) C MamGyp-int LTR/Gypsy (364) 4698 4454 2352657 313 28.9 4.3 0.9 chr8 112769180 112769294 (33594728) + MamGypLTR1d LTR/Gypsy 681 799 (14) 2354137 395 25.9 2.2 0.9 chr8 113184435 113184578 (33179444) + MamGypLTR1d LTR/Gypsy 680 811 (2) 2354666 232 19.5 0.0 0.0 chr8 113187552 113187592 (33176430) + MamGypLTR3 LTR/Gypsy 394 434 (405) 2354672 324 26.4 2.7 0.9 chr8 113593109 113593219 (32770803) + MamGypLTR2b LTR/Gypsy 754 866 (56) 2355257 454 33.2 6.4 5.5 chr8 113724511 113724854 (32639168) C LTR81B LTR/Gypsy (118) 1275 929 2355437 396 28.4 6.7 6.7 chr8 113730367 113730619 (32633403) C LTR81B LTR/Gypsy (948) 445 193 2355441 316 35.6 1.9 0.9 chr8 114000234 114000338 (32363684) + MamGypLTR1b LTR/Gypsy 423 528 (254) 2355837 225 25.2 15.3 4.0 chr8 114022535 114022658 (32341364) + MamGypLTR2c LTR/Gypsy 837 974 (94) 2355874 281 22.0 0.0 0.0 chr8 114253534 114253592 (32110430) + MamGypLTR1c LTR/Gypsy 745 803 (0) 2356196 241 23.4 4.7 0.0 chr8 114478497 114478560 (31885462) C MamGypLTR1d LTR/Gypsy (9) 804 738 2356518 522 29.6 9.3 5.0 chr8 115907587 115907963 (30456059) + MamGypLTR2c LTR/Gypsy 673 1065 (3) 2358379 297 18.8 9.4 4.7 chr8 116073061 116073166 (30290856) + MamGypLTR2c LTR/Gypsy 33 143 (925) 2358604 230 31.5 1.3 6.5 chr8 116073848 116074000 (30290022) + MamGypLTR2c LTR/Gypsy 909 1053 (15) 2358605 239 28.8 12.5 0.9 chr8 116107129 116107240 (30256782) + MamGypLTR1a LTR/Gypsy 658 782 (2) 2358650 329 32.6 16.1 1.5 chr8 116402599 116402956 (29961066) C MamGypLTR1a LTR/Gypsy (3) 810 401 2359073 265 25.0 19.8 0.0 chr8 116403192 116403287 (29960735) C MamGypLTR1a LTR/Gypsy (684) 119 5 2359073 238 26.5 2.6 9.7 chr8 117686957 117687069 (28676953) C LTR81B LTR/Gypsy (40) 1353 1249 2360800 342 24.5 3.2 1.1 chr8 117838465 117838559 (28525463) + MamGypLTR1d LTR/Gypsy 38 134 (679) 2361052 586 34.5 8.4 1.4 chr8 117838566 117838921 (28525101) + MamGypLTR1c LTR/Gypsy 380 760 (43) 2361053 546 25.9 13.6 4.8 chr8 118076973 118077281 (28286741) + LTR81B LTR/Gypsy 1055 1390 (3) 2361428 458 28.1 4.2 6.0 chr8 118292114 118292401 (28071621) C LTR81B LTR/Gypsy (1056) 294 9 2361738 243 33.1 9.7 0.7 chr8 118343535 118343689 (28020333) + LTR81A LTR/Gypsy 599 767 (422) 2361822 278 27.4 8.9 6.2 chr8 118344409 118344480 (28019542) + LTR81A LTR/Gypsy 1165 1240 (110) 2361822 278 27.4 8.9 6.2 chr8 118344516 118344621 (28019401) + LTR81A LTR/Gypsy 1241 1348 (2) 2361822 253 29.3 1.7 3.3 chr8 118641255 118641374 (27722648) C MamGypLTR1c LTR/Gypsy (21) 792 675 2362234 258 33.7 2.4 6.2 chr8 118641501 118641709 (27722313) C MamGypLTR1c LTR/Gypsy (602) 201 1 2362234 280 23.5 3.6 3.6 chr8 118666707 118666843 (27697179) C MamGypLTR2b LTR/Gypsy (28) 894 758 2362274 256 32.7 16.0 0.0 chr8 118667121 118667270 (27696752) C LTR81A LTR/Gypsy (392) 958 785 2362275 331 15.3 5.6 0.0 chr8 118715421 118715492 (27648530) C MamGypLTR1a LTR/Gypsy (36) 748 673 2362363 332 23.8 8.5 0.9 chr8 119654118 119654223 (26709799) C MamGypLTR1b LTR/Gypsy (42) 740 627 2363920 299 30.4 2.7 0.0 chr8 119718699 119718810 (26645212) + MamGypLTR1b LTR/Gypsy 619 733 (49) 2364026 343 28.9 6.9 2.2 chr8 120052545 120052792 (26311230) + LTR81A LTR/Gypsy 174 439 (911) 2364509 331 26.3 9.7 8.1 chr8 120113631 120113816 (26250206) C LTR81A LTR/Gypsy (1127) 223 35 2364621 359 24.7 12.1 2.3 chr8 120378073 120378246 (25985776) C MamGypLTR2b LTR/Gypsy (12) 910 720 2364964 263 33.8 5.9 2.2 chr8 120378738 120378873 (25985149) C MamGypLTR2b LTR/Gypsy (751) 171 31 2364965 268 34.3 0.7 1.4 chr8 120541271 120541409 (25822613) + MamGypLTR3 LTR/Gypsy 382 519 (320) 2365203 320 28.0 4.0 5.3 chr8 120558153 120558303 (25805719) C MamGypLTR1a LTR/Gypsy (590) 194 46 2365230 563 22.8 32.9 5.8 chr8 121095883 121096241 (25267781) C LTR81B LTR/Gypsy (921) 472 15 2366274 608 36.0 8.1 5.1 chr8 121850646 121851287 (24512735) + MamGypLTR1a LTR/Gypsy 101 761 (23) 2367491 393 32.8 8.3 3.3 chr8 122145100 122145339 (24218683) C MamGypLTR3 LTR/Gypsy (113) 726 475 2367958 431 29.0 8.6 0.0 chr8 122352448 122352609 (24011413) C LTR81 LTR/Gypsy (4) 1185 1010 2368294 287 28.0 0.8 1.8 chr8 122354911 122355030 (24008992) C LTR81 LTR/Gypsy (1113) 280 165 2368294 350 25.0 1.7 9.6 chr8 122355161 122355275 (24008747) C LTR81 LTR/Gypsy (111) 167 62 2368294 432 36.2 9.4 3.5 chr8 122730095 122730581 (23633441) + MamGypLTR3 LTR/Gypsy 321 836 (3) 2368952 553 33.1 11.9 5.0 chr8 122770962 122771463 (23592559) C MamGypLTR1b LTR/Gypsy (7) 777 241 2369011 240 30.2 5.7 14.4 chr8 122818729 122818809 (23545213) + MamGypLTR3 LTR/Gypsy 546 625 (214) 2369094 240 30.2 5.7 14.4 chr8 122818835 122819015 (23545007) + MamGypLTR3 LTR/Gypsy 626 785 (54) 2369094 225 27.2 8.5 3.4 chr8 123273613 123273730 (23090292) + LTR81C LTR/Gypsy 863 986 (167) 2369773 603 35.0 12.6 3.7 chr8 123671904 123672419 (22691603) C LTR81C LTR/Gypsy (24) 1129 568 2370448 344 32.6 15.9 0.7 chr8 123673072 123673216 (22690806) C MamGypLTR2c LTR/Gypsy (604) 464 298 2370451 284 27.3 2.0 0.0 chr8 123783062 123783160 (22580862) C MamGypLTR1d LTR/Gypsy (5) 808 708 2370651 226 16.7 7.3 1.8 chr8 124602462 124602516 (21761506) C LTR81AB LTR/Gypsy (19) 259 202 2372299 299 28.4 13.4 8.8 chr8 124622019 124622346 (21741676) + MamGypLTR3 LTR/Gypsy 497 839 (0) 2372331 503 29.0 4.6 4.7 chr8 124773232 124773491 (21590531) C LTR81C LTR/Gypsy (7) 1343 888 2372617 980 16.8 4.9 0.0 chr8 124773489 124773673 (21590349) C LTR81A LTR/Gypsy (1076) 274 81 2372618 438 29.2 5.8 1.7 chr8 125449001 125449174 (20914848) + MamGypLTR1d LTR/Gypsy 13 193 (620) 2373781 258 26.0 2.7 0.0 chr8 125450043 125450115 (20913907) + MamGypLTR1d LTR/Gypsy 673 747 (56) 2373781 249 15.5 0.0 12.1 chr8 125943357 125943422 (20420600) + MamGypLTR1d LTR/Gypsy 72 129 (684) 2374680 605 26.2 16.1 2.4 chr8 125943653 125943906 (20420116) + MamGypLTR1c LTR/Gypsy 507 795 (8) 2374681 477 25.5 12.9 4.3 chr8 125970442 125970720 (20393302) C LTR81B LTR/Gypsy (1084) 309 7 2374731 846 27.7 3.1 6.5 chr8 126587802 126588094 (19775928) + MamGypLTR3 LTR/Gypsy 557 839 (0) 2375946 402 28.1 8.2 4.8 chr8 126732335 126732480 (19631542) + MamGypLTR1b LTR/Gypsy 592 742 (40) 2376260 608 25.2 4.3 5.8 chr8 126773815 126774092 (19589930) C LTR81B LTR/Gypsy (1109) 284 11 2376337 394 36.6 0.0 1.1 chr8 126869771 126869947 (19494075) C MamGypLTR1b LTR/Gypsy (61) 721 547 2376496 347 30.1 1.9 7.0 chr8 127146503 127146716 (19217306) C MamGypLTR1b LTR/Gypsy (1) 781 579 2376933 400 32.4 5.9 10.1 chr8 127436511 127436867 (18927155) C MamGypLTR3 LTR/Gypsy (36) 803 462 2377414 324 33.6 0.8 0.0 chr8 127551752 127551879 (18812143) C MamGypLTR1a LTR/Gypsy (3) 781 653 2377664 348 27.4 5.0 4.4 chr8 127551942 127552101 (18811921) C MamGypLTR1a LTR/Gypsy (283) 501 341 2377664 278 26.7 7.9 11.0 chr8 127863419 127863582 (18500440) + LTR81C LTR/Gypsy 3 161 (992) 2378244 229 23.3 12.0 2.7 chr8 128791442 128791516 (17572506) C MamGypLTR1d LTR/Gypsy (37) 776 695 2379981 506 27.3 11.6 8.6 chr8 129622565 129622925 (16741097) C LTR81A LTR/Gypsy (1011) 382 11 2381622 344 30.9 10.2 4.6 chr8 129679998 129680259 (16683763) C LTR81A LTR/Gypsy (0) 1393 1072 2381708 636 29.6 16.9 0.8 chr8 130716748 130717138 (15646884) C MamGypLTR1c LTR/Gypsy (65) 738 285 2383425 305 19.8 2.9 6.8 chr8 130841447 130841549 (15522473) C MamGypLTR1c LTR/Gypsy (661) 142 44 2383584 307 27.1 4.9 7.0 chr8 131685641 131685783 (14678239) C MamGypLTR1d LTR/Gypsy (3) 810 671 2385324 531 24.2 11.8 9.9 chr8 131694727 131694988 (14669034) C LTR81A LTR/Gypsy (106) 1244 825 2385344 288 21.0 7.7 3.9 chr8 131695612 131695715 (14668307) C LTR81A LTR/Gypsy (1176) 217 110 2385344 296 21.7 1.4 1.4 chr8 131696080 131696149 (14667873) C LTR81A LTR/Gypsy (1249) 101 32 2385344 676 35.3 10.5 7.8 chr8 132058774 132059544 (14304478) C MamGypLTR1c LTR/Gypsy (4) 799 8 2385996 382 29.2 4.3 5.3 chr8 132538511 132538698 (13825324) + MamGypLTR3 LTR/Gypsy 595 780 (59) 2386772 263 31.8 1.1 4.3 chr8 132624140 132624231 (13739791) + MamGyp-int LTR/Gypsy 672 760 (4302) 2386896 354 35.1 5.6 6.7 chr8 132624517 132624800 (13739222) + MamGyp-int LTR/Gypsy 1228 1508 (3554) 2386896 807 36.2 5.2 1.4 chr8 132624889 132625328 (13738694) + MamGyp-int LTR/Gypsy 1686 2142 (2920) 2386896 361 34.7 4.8 1.4 chr8 132625780 132625925 (13738097) + MamGyp-int LTR/Gypsy 2498 2648 (2414) 2386896 940 35.2 9.0 3.2 chr8 132626062 132626694 (13737328) + MamGyp-int LTR/Gypsy 2885 3554 (1508) 2386896 645 35.7 6.4 1.4 chr8 132627489 132627849 (13736173) + MamGyp-int LTR/Gypsy 4679 5057 (5) 2386896 549 31.6 4.2 4.6 chr8 133319408 133319623 (13044399) + MamGypLTR3 LTR/Gypsy 492 706 (133) 2388062 272 29.9 4.5 1.1 chr8 133598381 133598468 (12765554) + MamGypLTR1c LTR/Gypsy 333 423 (380) 2388628 230 38.9 2.0 2.0 chr8 133598777 133598923 (12765099) C MamGypLTR1a LTR/Gypsy (234) 550 404 2388630 425 23.5 8.6 0.0 chr8 133773658 133773819 (12590203) C MamGypLTR1d LTR/Gypsy (19) 794 619 2388935 532 22.0 19.0 3.6 chr8 133946809 133947043 (12416979) C MamGypLTR1a LTR/Gypsy (485) 297 22 2389191 475 29.2 3.3 3.8 chr8 134333928 134334137 (12029885) + MamGypLTR1a LTR/Gypsy 575 783 (1) 2389924 389 25.5 5.4 4.1 chr8 134593342 134593488 (11770534) C MamGypLTR1a LTR/Gypsy (635) 149 1 2390454 283 34.9 8.3 1.6 chr8 135444184 135444436 (10919586) C MamGypLTR2c LTR/Gypsy (513) 555 286 2391968 296 34.2 5.6 4.2 chr8 135467636 135467939 (10896083) + LTR81A LTR/Gypsy 131 636 (757) 2392010 384 24.9 10.8 5.6 chr8 135468003 135468215 (10895807) + LTR81A LTR/Gypsy 1104 1327 (23) 2392010 371 14.3 1.6 0.0 chr8 135848973 135849035 (10514987) + MamGypLTR3 LTR/Gypsy 768 831 (8) 2392595 297 34.0 8.2 3.5 chr8 135934582 135934890 (10429132) + MamGypLTR1b LTR/Gypsy 418 763 (40) 2392763 493 25.0 2.2 1.5 chr8 136435880 136436013 (9928009) + LTR81A LTR/Gypsy 43 177 (1173) 2393569 316 30.1 2.3 3.9 chr8 136436365 136436492 (9927530) + LTR81A LTR/Gypsy 735 860 (490) 2393569 227 23.5 11.6 1.2 chr8 137465483 137465568 (8898454) C MamGypLTR1b LTR/Gypsy (53) 729 635 2395217 583 35.3 9.1 1.2 chr8 138195732 138196158 (8167864) C LTR81 LTR/Gypsy (326) 863 403 2396347 589 29.7 1.5 8.2 chr8 138309532 138309799 (8054223) + LTR81AB LTR/Gypsy 1 250 (28) 2396513 266 32.3 6.3 12.0 chr8 139176550 139176688 (7187334) + MamGypLTR1a LTR/Gypsy 377 519 (284) 2397749 284 29.8 4.0 14.2 chr8 139177139 139177365 (7186657) + MamGypLTR1a LTR/Gypsy 520 731 (72) 2397749 284 26.8 1.1 16.9 chr8 139177663 139177742 (7186280) + MamGypLTR1a LTR/Gypsy 714 780 (4) 2397749 519 32.1 8.2 4.4 chr8 139283139 139283480 (7080542) + MamGypLTR3 LTR/Gypsy 485 839 (0) 2397920 233 28.0 5.3 0.0 chr8 139427460 139427534 (6936488) + MamGypLTR2b LTR/Gypsy 826 904 (18) 2398153 526 32.2 4.2 6.1 chr8 139512660 139513036 (6850986) + MamGypLTR3 LTR/Gypsy 377 746 (93) 2398292 257 26.2 0.0 1.5 chr8 139542765 139542830 (6821192) C MamGypLTR3 LTR/Gypsy (5) 834 770 2398352 321 36.5 4.8 3.9 chr8 140318384 140318719 (6045303) + LTR81B LTR/Gypsy 110 448 (945) 2399588 258 27.5 3.8 0.0 chr8 142051615 142051694 (4312328) + MamGypLTR3 LTR/Gypsy 683 765 (74) 2402409 429 23.0 1.7 13.1 chr8 144933306 144933367 (1430655) C LTR81B LTR/Gypsy (1175) 218 167 2405992 429 23.0 1.7 13.1 chr8 144933711 144933822 (1430200) C LTR81B LTR/Gypsy (1227) 166 64 2405992 805 30.0 10.3 3.9 chr9 477173 477630 (140735801) + LTR81A LTR/Gypsy 1 487 (863) 2408439 434 23.1 0.9 1.9 chr9 478768 478873 (140734558) + LTR81A LTR/Gypsy 1049 1153 (0) 2408439 468 27.6 6.2 3.7 chr9 581563 581800 (140631631) C MamGypLTR1c LTR/Gypsy (7) 796 538 2408621 475 26.3 7.5 2.5 chr9 766263 766449 (140446982) + LTR81B LTR/Gypsy 1 200 (1150) 2408898 416 26.4 1.1 0.0 chr9 1117947 1118068 (140095363) + LTR81A LTR/Gypsy 39 161 (1232) 2409485 387 25.7 14.9 5.1 chr9 1118247 1118530 (140094901) + LTR81A LTR/Gypsy 155 462 (931) 2409485 541 30.7 12.0 5.2 chr9 1218425 1219049 (139994382) + MamGypLTR1c LTR/Gypsy 110 790 (13) 2409615 297 15.2 1.4 4.3 chr9 1276795 1276863 (139936568) + MamGypLTR1b LTR/Gypsy 483 549 (233) 2409698 381 31.0 2.3 1.5 chr9 1471831 1471961 (139741470) C MamGyp-int LTR/Gypsy (610) 4452 4321 2409960 529 34.0 7.3 4.4 chr9 1552933 1553495 (139659936) + MamGypLTR1a LTR/Gypsy 85 663 (121) 2410072 340 37.0 14.1 2.0 chr9 1799802 1800192 (139413239) C MamGypLTR1c LTR/Gypsy (8) 795 357 2410367 609 30.4 17.2 0.6 chr9 1883442 1883802 (139329629) C MamGypLTR1a LTR/Gypsy (0) 784 364 2410488 257 34.8 9.9 2.6 chr9 2128129 2128441 (139084990) C LTR81C LTR/Gypsy (246) 907 572 2410797 343 28.4 11.0 0.6 chr9 2130440 2130602 (139082829) C LTR81A LTR/Gypsy (1170) 180 1 2410803 1110 31.3 9.0 11.8 chr9 2295145 2296382 (138917049) + LTR81A LTR/Gypsy 145 1347 (3) 2411020 280 27.9 14.0 2.8 chr9 2304149 2304255 (138909176) + MamGypLTR2b LTR/Gypsy 586 704 (218) 2411035 473 30.7 2.8 2.4 chr9 2389786 2390035 (138823396) + MamGypLTR1a LTR/Gypsy 1 251 (533) 2411157 265 30.6 18.3 1.4 chr9 2390057 2390351 (138823080) + MamGypLTR1b LTR/Gypsy 192 536 (248) 2411158 285 26.2 12.8 1.6 chr9 2390393 2390517 (138822914) + MamGypLTR1b LTR/Gypsy 612 752 (61) 2411158 298 25.4 19.4 0.6 chr9 2537934 2538103 (138675328) C MamGypLTR1c LTR/Gypsy (16) 787 586 2411363 324 31.0 7.3 5.7 chr9 2854917 2855162 (138358269) + MamGypLTR1b LTR/Gypsy 496 745 (37) 2411832 285 29.9 6.5 2.4 chr9 2865258 2865425 (138348006) + MamGypLTR1a LTR/Gypsy 144 318 (466) 2411857 249 22.8 0.0 0.0 chr9 2881356 2881412 (138332019) + LTR81B LTR/Gypsy 4 60 (218) 2411879 291 30.4 15.6 3.4 chr9 2881511 2881748 (138331683) + LTR81B LTR/Gypsy 190 456 (937) 2411879 318 30.1 1.6 2.4 chr9 3556369 3556494 (137656937) + LTR81C LTR/Gypsy 102 226 (927) 2412873 321 26.1 4.2 6.7 chr9 3673016 3673081 (137540350) + MamGypLTR3 LTR/Gypsy 641 707 (132) 2413021 321 26.1 4.2 6.7 chr9 3673568 3673619 (137539812) + MamGypLTR3 LTR/Gypsy 708 756 (83) 2413021 651 22.7 8.2 4.8 chr9 3692306 3692573 (137520858) + LTR81B LTR/Gypsy 7 283 (1110) 2413050 266 26.8 2.9 4.9 chr9 3693886 3693987 (137519444) + LTR81B LTR/Gypsy 1188 1287 (106) 2413050 1023 32.2 9.0 5.0 chr9 4140735 4140796 (137072635) + MamGypLTR1b LTR/Gypsy 91 152 (630) 2413628 1023 32.2 9.0 5.0 chr9 4141100 4141694 (137071737) + MamGypLTR1b LTR/Gypsy 153 774 (8) 2413628 277 36.8 1.1 4.2 chr9 4329974 4330163 (136883268) + LTR81A LTR/Gypsy 34 217 (1133) 2413905 468 28.1 6.8 4.5 chr9 4340301 4340565 (136872866) C LTR81C LTR/Gypsy (43) 1110 840 2413927 487 28.6 5.2 5.6 chr9 4346238 4346507 (136866924) C LTR81AB LTR/Gypsy (7) 271 3 2413935 623 29.9 5.1 8.1 chr9 4350108 4350511 (136862920) + LTR81B LTR/Gypsy 758 1389 (4) 2413941 264 30.3 12.7 4.3 chr9 4480146 4480196 (136733235) C LTR81B LTR/Gypsy (1068) 325 276 2414169 264 30.3 12.7 4.3 chr9 4480501 4480748 (136732683) C LTR81B LTR/Gypsy (1118) 275 1 2414169 325 25.9 2.7 1.8 chr9 4888472 4888580 (136324851) + LTR81 LTR/Gypsy 471 580 (609) 2414869 313 28.8 11.2 3.4 chr9 5183375 5183579 (136029852) + LTR81AB LTR/Gypsy 8 228 (50) 2415224 337 28.9 4.8 10.5 chr9 5191350 5191643 (136021788) + MamGypLTR1a LTR/Gypsy 1 277 (507) 2415237 274 30.0 16.1 2.8 chr9 5191757 5192010 (136021421) + MamGypLTR1a LTR/Gypsy 496 783 (1) 2415237 365 31.1 11.8 2.6 chr9 5362604 5362921 (135850510) + MamGypLTR2c LTR/Gypsy 19 373 (695) 2415398 673 26.9 9.9 3.4 chr9 5363670 5363961 (135849470) + MamGypLTR2c LTR/Gypsy 758 1068 (0) 2415398 365 17.8 5.5 0.0 chr9 5442588 5442660 (135770771) + MamGypLTR3 LTR/Gypsy 552 628 (211) 2415509 397 28.9 11.8 5.5 chr9 5560154 5560482 (135652949) C MamGypLTR3 LTR/Gypsy (9) 830 481 2415701 608 31.0 15.1 6.3 chr9 6049191 6049748 (135163683) + MamGypLTR1b LTR/Gypsy 15 621 (161) 2416479 269 24.4 8.3 5.0 chr9 6064520 6064640 (135148791) + LTR81 LTR/Gypsy 348 472 (921) 2416501 794 30.9 8.4 4.8 chr9 6065107 6065545 (135147886) + LTR81 LTR/Gypsy 722 1176 (13) 2416501 251 39.2 3.1 0.5 chr9 6131472 6131666 (135081765) C MamGypLTR1c LTR/Gypsy (14) 789 590 2416597 228 34.5 5.0 1.6 chr9 6132166 6132286 (135081145) C MamGypLTR1c LTR/Gypsy (429) 384 260 2416597 246 19.8 4.3 12.0 chr9 6168302 6168393 (135045038) C LTR81AB LTR/Gypsy (102) 176 92 2416648 299 32.6 12.0 5.2 chr9 7272170 7272402 (133941029) + MamGypLTR2b LTR/Gypsy 168 416 (506) 2418459 240 24.6 1.3 4.0 chr9 7272638 7272713 (133940718) + MamGypLTR2b LTR/Gypsy 772 845 (77) 2418459 272 17.5 0.0 3.4 chr9 7273499 7273557 (133939874) + MamGypLTR2b LTR/Gypsy 866 922 (0) 2418459 374 31.3 7.8 3.4 chr9 7285109 7285313 (133928118) + MamGypLTR3 LTR/Gypsy 515 728 (111) 2418471 238 24.1 0.0 1.8 chr9 7364776 7364830 (133848601) C MamGypLTR1b LTR/Gypsy (606) 176 123 2418584 253 25.4 1.6 0.0 chr9 7967025 7967087 (133246344) + MamGypLTR1c LTR/Gypsy 1 64 (739) 2419411 267 35.4 6.3 5.8 chr9 7967186 7967563 (133245868) + MamGypLTR2c LTR/Gypsy 5 384 (684) 2419412 269 22.7 1.3 1.3 chr9 8860550 8860625 (132352806) + LTR81A LTR/Gypsy 1275 1350 (0) 2420552 228 27.9 13.3 2.1 chr9 9969432 9969574 (131243857) C MamGypLTR2b LTR/Gypsy (0) 922 764 2422034 372 34.1 3.3 3.9 chr9 10147073 10147252 (131066179) + LTR81 LTR/Gypsy 766 944 (245) 2422307 299 31.9 1.8 0.0 chr9 10685897 10686009 (130527422) + LTR81B LTR/Gypsy 1275 1389 (4) 2423079 318 38.7 8.1 3.2 chr9 11435637 11435882 (129777549) C MamGyp-int LTR/Gypsy (4161) 901 644 2424006 303 32.4 3.8 5.4 chr9 11442777 11442925 (129770506) + MamGypLTR3 LTR/Gypsy 579 725 (114) 2424014 303 32.4 3.8 5.4 chr9 11443868 11443903 (129769528) + MamGypLTR3 LTR/Gypsy 726 761 (78) 2424014 238 25.0 0.0 3.0 chr9 12340990 12341055 (128872376) + MamGypLTR2c LTR/Gypsy 917 980 (88) 2425186 438 29.7 6.8 8.7 chr9 12623539 12623898 (128589533) + LTR81A LTR/Gypsy 785 1326 (24) 2425563 407 33.5 4.2 3.8 chr9 12886194 12886454 (128326977) C MamGypLTR1d LTR/Gypsy (0) 813 552 2425930 252 31.4 5.6 1.9 chr9 13610527 13610633 (127602798) + MamGypLTR1b LTR/Gypsy 127 237 (545) 2426962 228 26.5 0.0 0.0 chr9 14187948 14187996 (127025435) C LTR81C LTR/Gypsy (870) 283 235 2427695 316 27.8 8.8 2.7 chr9 14424714 14424909 (126788522) + LTR81B LTR/Gypsy 177 403 (947) 2427996 323 24.2 18.5 2.2 chr9 15522156 15522290 (125691141) C MamGypLTR1b LTR/Gypsy (0) 782 626 2429717 363 32.3 10.8 7.3 chr9 15999656 15999981 (125213450) C MamGypLTR2c LTR/Gypsy (585) 483 10 2430350 255 25.3 5.1 0.0 chr9 16275026 16275104 (124938327) + MamGypLTR1b LTR/Gypsy 697 779 (3) 2430719 2152 28.8 14.3 6.3 chr9 16304353 16305602 (124907829) + LTR81A LTR/Gypsy 1 1350 (0) 2430760 299 30.6 4.8 3.0 chr9 16362722 16362886 (124850545) C MamGypLTR1d LTR/Gypsy (580) 233 66 2430850 247 19.2 6.0 6.0 chr9 17012625 17012707 (124200724) C MamGypLTR2b LTR/Gypsy (3) 919 837 2431754 271 32.3 4.9 8.6 chr9 17013050 17013293 (124200138) C MamGypLTR2b LTR/Gypsy (539) 383 149 2431755 260 22.2 1.3 4.0 chr9 17013325 17013399 (124200032) C MamGypLTR2b LTR/Gypsy (935) 133 61 2431755 279 30.1 5.2 5.2 chr9 17049205 17049376 (124164055) + MamGypLTR1b LTR/Gypsy 391 562 (220) 2431809 592 31.0 5.8 8.4 chr9 17123936 17124364 (124089067) C MamGypLTR3 LTR/Gypsy (28) 811 394 2431925 362 34.3 0.5 7.0 chr9 17530507 17530719 (123682712) + MamGypLTR1b LTR/Gypsy 528 726 (56) 2432432 251 33.3 8.2 1.0 chr9 17808983 17809079 (123404352) + MamGypLTR1a LTR/Gypsy 501 604 (180) 2432796 247 17.0 1.9 1.9 chr9 18130237 18130290 (123083141) C MamGypLTR1a LTR/Gypsy (617) 167 114 2433202 403 29.1 7.5 3.8 chr9 18374184 18374316 (122839115) C LTR81C LTR/Gypsy (1052) 137 4 2433524 256 33.1 5.7 6.2 chr9 18383654 18383830 (122829601) + MamGypLTR2c LTR/Gypsy 864 1039 (29) 2433537 257 21.1 8.6 3.2 chr9 19753167 19753259 (121460172) C LTR81C LTR/Gypsy (602) 551 454 2435724 292 20.6 4.4 0.0 chr9 19790760 19790836 (121422595) C LTR81A LTR/Gypsy (1241) 152 72 2435765 512 24.3 15.0 6.8 chr9 19902845 19903133 (121310298) + LTR81B LTR/Gypsy 2 321 (1029) 2435919 299 31.0 16.3 4.8 chr9 19903512 19903648 (121309783) + LTR81B LTR/Gypsy 322 483 (867) 2435919 1083 31.0 11.5 3.6 chr9 19903713 19904105 (121309326) + LTR81B LTR/Gypsy 600 1023 (370) 2435919 1083 31.0 11.5 3.6 chr9 19904268 19904483 (121308948) + LTR81B LTR/Gypsy 1024 1257 (136) 2435919 658 27.6 11.7 7.0 chr9 19977555 19977813 (121235618) + MamGypLTR1a LTR/Gypsy 8 288 (515) 2436044 416 31.9 18.6 1.0 chr9 19977825 19978137 (121235294) + MamGypLTR1a LTR/Gypsy 400 770 (12) 2436044 228 31.0 4.6 5.2 chr9 20102102 20102254 (121111177) + MamGypLTR3 LTR/Gypsy 601 752 (87) 2436240 302 29.5 8.7 0.0 chr9 20318402 20318550 (120894881) + MamGypLTR1a LTR/Gypsy 3 164 (620) 2436561 460 27.7 10.2 5.7 chr9 20319090 20319497 (120893934) + MamGypLTR1a LTR/Gypsy 355 780 (4) 2436561 470 28.7 11.8 5.4 chr9 21037336 21037648 (120175783) C LTR81A LTR/Gypsy (987) 363 31 2437579 247 34.8 9.7 4.5 chr9 21470933 21471179 (119742252) C LTR81C LTR/Gypsy (830) 323 64 2438092 536 28.2 9.2 5.3 chr9 21620260 21620367 (119593064) + MamGypLTR1d LTR/Gypsy 519 631 (182) 2438306 536 28.2 9.2 5.3 chr9 21620687 21620861 (119592570) + MamGypLTR1d LTR/Gypsy 632 813 (0) 2438306 843 26.0 13.2 3.2 chr9 21734544 21734913 (119478518) C LTR81B LTR/Gypsy (8) 1385 979 2438467 280 32.4 6.2 0.9 chr9 21735272 21735381 (119478050) C LTR81B LTR/Gypsy (893) 500 385 2438467 295 25.0 9.7 11.3 chr9 21736610 21736839 (119476592) C LTR81B LTR/Gypsy (1031) 362 129 2438467 423 39.1 10.9 3.4 chr9 22549787 22550228 (118663203) C LTR81B LTR/Gypsy (403) 990 516 2439498 253 32.1 5.4 2.7 chr9 23634992 23635103 (117578328) + MamGypLTR1b LTR/Gypsy 493 607 (175) 2440908 232 25.0 13.4 2.5 chr9 24329190 24329308 (116884123) C MamGypLTR1b LTR/Gypsy (0) 782 651 2441759 536 28.9 11.0 6.1 chr9 24550348 24550657 (116662774) + LTR81C LTR/Gypsy 829 1153 (0) 2442033 327 29.4 4.1 1.6 chr9 26070868 26070988 (115142443) + MamGypLTR2c LTR/Gypsy 2 125 (943) 2443913 345 26.1 5.4 5.1 chr9 26078570 26078733 (115134698) + MamGypLTR1c LTR/Gypsy 659 905 (17) 2443917 235 20.6 1.3 6.4 chr9 26116758 26116835 (115096596) + MamGypLTR1d LTR/Gypsy 5 78 (735) 2443975 485 36.7 7.6 7.8 chr9 26117030 26117558 (115095873) + MamGypLTR1d LTR/Gypsy 286 813 (0) 2443976 715 32.4 11.2 0.9 chr9 27428644 27428982 (113784449) + MamGypLTR1a LTR/Gypsy 354 727 (57) 2445900 648 22.6 8.6 0.9 chr9 27685376 27685607 (113527824) + MamGypLTR2b LTR/Gypsy 661 910 (12) 2446267 282 20.0 13.9 5.7 chr9 28044429 28044550 (113168881) + LTR81AB LTR/Gypsy 144 275 (3) 2446730 354 36.6 6.5 0.0 chr9 28044881 28045071 (113168360) + LTR81A LTR/Gypsy 629 814 (536) 2446731 233 22.9 0.0 0.0 chr9 28045331 28045378 (113168053) + LTR81A LTR/Gypsy 968 1015 (138) 2446731 230 30.3 0.0 0.0 chr9 28045394 28045459 (113167972) + LTR81A LTR/Gypsy 1263 1328 (22) 2446731 682 32.3 5.1 4.8 chr9 28334739 28335070 (112878361) + MamGypLTR1a LTR/Gypsy 452 784 (0) 2447123 342 31.8 1.8 0.0 chr9 28591857 28591966 (112621465) + MamGypLTR1b LTR/Gypsy 460 571 (211) 2447489 317 29.6 0.0 6.9 chr9 28929087 28929231 (112284200) + MamGypLTR1d LTR/Gypsy 5 139 (674) 2447958 306 28.6 2.4 5.6 chr9 28929252 28929377 (112284054) + MamGypLTR1d LTR/Gypsy 139 260 (543) 2447958 292 28.1 1.1 2.2 chr9 30976643 30976733 (110236698) + MamGypLTR3 LTR/Gypsy 733 822 (17) 2450611 261 40.0 3.2 0.0 chr9 30992002 30992156 (110221275) C MamGypLTR1c LTR/Gypsy (304) 499 340 2450621 273 35.1 10.0 4.4 chr9 31128282 31128600 (110084831) C LTR81 LTR/Gypsy (7) 1182 846 2450778 262 31.8 6.9 6.5 chr9 31205208 31205483 (110007948) + LTR81B LTR/Gypsy 2 278 (0) 2450868 325 28.9 6.2 6.2 chr9 31205971 31206147 (110007284) + LTR81B LTR/Gypsy 1217 1393 (0) 2450868 395 31.4 9.2 1.5 chr9 31648765 31649077 (109564354) + MamGypLTR1a LTR/Gypsy 404 780 (33) 2451452 307 33.1 4.3 1.4 chr9 32669375 32669515 (108543916) + MamGypLTR1d LTR/Gypsy 1 145 (658) 2452799 457 29.5 3.3 4.4 chr9 32670856 32671036 (108542395) + MamGypLTR1d LTR/Gypsy 635 813 (0) 2452799 352 36.0 11.8 4.3 chr9 32695522 32696124 (108517307) + MamGypLTR2b LTR/Gypsy 223 870 (52) 2452824 281 29.3 2.4 1.2 chr9 32703253 32703335 (108510096) C MamGypLTR3 LTR/Gypsy (7) 832 749 2452835 538 28.3 8.2 6.5 chr9 32928044 32928090 (108285341) + MamGypLTR1c LTR/Gypsy 10 48 (765) 2453199 538 27.4 8.9 4.9 chr9 32928223 32928516 (108284915) + MamGypLTR1c LTR/Gypsy 45 365 (419) 2453199 402 30.3 16.7 3.3 chr9 32928574 32928843 (108284588) + MamGypLTR1c LTR/Gypsy 470 775 (28) 2453199 250 22.8 9.3 5.6 chr9 33218731 33218827 (107994604) + LTR81B LTR/Gypsy 103 206 (1187) 2453733 439 22.8 0.8 5.4 chr9 33219198 33219327 (107994104) + LTR81B LTR/Gypsy 1262 1385 (8) 2453733 452 31.5 5.8 9.2 chr9 33534937 33535230 (107678201) C MamGypLTR3 LTR/Gypsy (59) 780 497 2454370 814 25.8 14.1 4.1 chr9 34524275 34524642 (106688789) + LTR81B LTR/Gypsy 989 1393 (0) 2456272 413 28.8 7.8 5.6 chr9 34540830 34541061 (106672370) C MamGypLTR1b LTR/Gypsy (545) 237 1 2456294 552 32.7 11.0 4.4 chr9 34707011 34707537 (106505894) + MamGypLTR1a LTR/Gypsy 222 783 (1) 2456534 376 28.6 9.1 2.1 chr9 34785768 34785910 (106427521) C LTR81 LTR/Gypsy (1003) 186 34 2456622 231 31.7 11.7 5.8 chr9 34928926 34929096 (106284335) C LTR81A LTR/Gypsy (586) 764 584 2456790 309 28.3 2.6 0.9 chr9 35037111 35037224 (106176207) C MamGypLTR1b LTR/Gypsy (40) 742 627 2456936 363 33.9 0.8 0.8 chr9 35037442 35037560 (106175871) C MamGypLTR1b LTR/Gypsy (216) 566 448 2456936 531 28.1 13.3 8.3 chr9 35266803 35267222 (105946209) + MamGypLTR1d LTR/Gypsy 44 484 (329) 2457302 710 19.8 2.7 15.6 chr9 35439605 35439867 (105773564) C MamGypLTR2c LTR/Gypsy (17) 1051 823 2457519 303 27.3 0.0 2.5 chr9 35699137 35699215 (105514216) + LTR81B LTR/Gypsy 409 485 (908) 2457949 328 26.3 17.9 3.7 chr9 35768738 35768899 (105444532) + LTR81B LTR/Gypsy 1055 1239 (154) 2458017 463 29.6 13.3 1.8 chr9 35854793 35855045 (105358386) C MamGypLTR1d LTR/Gypsy (29) 784 483 2458130 426 25.8 3.8 2.3 chr9 35855701 35855831 (105357600) C MamGypLTR1d LTR/Gypsy (584) 229 97 2458130 700 26.6 10.7 7.3 chr9 35896013 35896397 (105317034) C LTR81B LTR/Gypsy (937) 456 59 2458197 260 25.0 9.8 2.4 chr9 36016012 36016134 (105197297) + MamGypLTR1a LTR/Gypsy 135 266 (518) 2458383 362 34.8 6.7 5.1 chr9 36032020 36032317 (105181114) C MamGypLTR2b LTR/Gypsy (513) 555 106 2458411 401 20.7 11.4 2.6 chr9 36132212 36132325 (105081106) + MamGypLTR2c LTR/Gypsy 13 136 (932) 2458603 462 32.0 12.9 2.2 chr9 36736407 36736705 (104476726) C MamGypLTR2b LTR/Gypsy (603) 465 62 2459919 426 31.9 13.3 2.2 chr9 36736734 36736766 (104476665) C MamGypLTR2b LTR/Gypsy (929) 139 107 2459919 396 27.5 3.5 7.8 chr9 36751677 36751924 (104461507) C MamGypLTR2b LTR/Gypsy (5) 1063 679 2459947 258 31.3 8.2 4.7 chr9 36752276 36752446 (104460985) C MamGypLTR2b LTR/Gypsy (749) 319 143 2459947 610 27.5 11.7 5.8 chr9 37573438 37573711 (103639720) + MamGypLTR3 LTR/Gypsy 494 783 (56) 2461449 400 28.0 14.9 6.8 chr9 38288404 38288771 (102924660) C MamGypLTR1b LTR/Gypsy (14) 768 371 2462769 365 24.7 19.4 3.1 chr9 38288830 38289025 (102924406) C MamGypLTR1b LTR/Gypsy (548) 234 7 2462769 362 32.4 3.9 7.8 chr9 38609550 38609807 (102603624) + MamGypLTR3 LTR/Gypsy 497 744 (95) 2463310 261 27.1 9.8 3.3 chr9 38654388 38654509 (102558922) + MamGypLTR1c LTR/Gypsy 616 745 (58) 2463385 264 23.9 13.6 0.0 chr9 38682553 38682640 (102530791) C LTR81A LTR/Gypsy (62) 1288 1189 2463421 283 19.4 4.8 0.0 chr9 39257714 39257775 (101955656) C MamGypLTR2b LTR/Gypsy (4) 918 854 2464259 429 31.8 7.5 4.0 chr9 39506178 39506403 (101707028) C LTR81C LTR/Gypsy (128) 1025 792 2464569 265 19.4 4.8 0.0 chr9 39786959 39787020 (101426411) C MamGypLTR2b LTR/Gypsy (4) 918 854 2464928 296 24.4 6.6 2.5 chr9 40600976 40601097 (100612334) C MamGypLTR2b LTR/Gypsy (4) 918 792 2465825 429 31.8 7.5 4.0 chr9 40833705 40833930 (100379501) C LTR81C LTR/Gypsy (128) 1025 792 2466120 230 33.0 5.7 0.0 chr9 40990473 40990560 (100222871) + LTR81A LTR/Gypsy 144 236 (1114) 2466292 408 29.6 8.4 3.2 chr9 41250536 41250761 (99962670) + LTR81C LTR/Gypsy 800 1025 (128) 2466626 370 29.4 7.2 3.2 chr9 41651222 41651418 (99562013) C LTR81C LTR/Gypsy (162) 991 800 2467074 309 32.9 4.3 8.1 chr9 42378033 42378290 (98835141) C MamGypLTR3 LTR/Gypsy (95) 744 497 2468104 344 31.8 4.9 5.9 chr9 42818447 42818650 (98394781) + MamGypLTR3 LTR/Gypsy 497 698 (141) 2468686 318 33.0 6.2 5.3 chr9 43123556 43123782 (98089649) + MamGypLTR3 LTR/Gypsy 497 725 (114) 2469088 466 31.3 7.5 4.0 chr9 43553820 43554045 (97659386) + LTR81C LTR/Gypsy 792 1025 (128) 2469573 265 19.4 4.8 0.0 chr9 43718751 43718812 (97494619) + MamGypLTR2b LTR/Gypsy 854 918 (4) 2469768 376 32.6 4.7 8.5 chr9 44108566 44108823 (97104608) + MamGypLTR3 LTR/Gypsy 497 744 (95) 2470244 368 27.7 0.5 11.0 chr9 47212368 47212500 (94000931) C LTR81A LTR/Gypsy (1099) 294 169 2474111 368 25.5 0.0 10.5 chr9 47212812 47212839 (94000592) C LTR81A LTR/Gypsy (1182) 168 145 2474111 344 31.8 4.9 5.9 chr9 66970367 66970570 (74242861) + MamGypLTR3 LTR/Gypsy 497 698 (141) 2475929 311 31.8 4.9 6.3 chr9 67321361 67321565 (73891866) C MamGypLTR3 LTR/Gypsy (141) 698 497 2476208 388 32.9 4.3 8.1 chr9 67936485 67936742 (73276689) C MamGypLTR3 LTR/Gypsy (95) 744 497 2476950 326 33.1 5.9 5.6 chr9 68469787 68470074 (72743357) + LTR81A LTR/Gypsy 10 298 (1052) 2477457 247 27.3 9.9 0.0 chr9 68712052 68712172 (72501259) C LTR81A LTR/Gypsy (1208) 142 10 2477580 240 33.5 5.9 5.6 chr9 69050910 69051197 (72162234) C LTR81A LTR/Gypsy (1052) 298 10 2477847 388 32.9 4.3 8.1 chr9 69391704 69391961 (71821470) C MamGypLTR3 LTR/Gypsy (95) 744 497 2478256 348 32.8 4.7 5.6 chr9 69711763 69711975 (71501456) C MamGypLTR3 LTR/Gypsy (132) 707 497 2478658 344 31.8 4.9 5.9 chr9 70077232 70077435 (71135996) C MamGypLTR3 LTR/Gypsy (141) 698 497 2479029 285 32.8 4.7 5.6 chr9 70327964 70328176 (70885255) C MamGypLTR3 LTR/Gypsy (132) 707 497 2479268 252 33.7 1.1 4.3 chr9 71141007 71141099 (70072332) C MamGypLTR1b LTR/Gypsy (83) 699 610 2480277 378 25.5 18.8 0.0 chr9 71521910 71522058 (69691373) C LTR81C LTR/Gypsy (8) 1145 969 2480873 228 33.3 6.7 5.0 chr9 71824774 71824893 (69388538) + MamGypLTR1d LTR/Gypsy 399 520 (293) 2481488 609 28.8 13.9 4.0 chr9 72442232 72442633 (68770798) C LTR81A LTR/Gypsy (1) 1349 908 2482378 706 27.0 3.9 3.6 chr9 72442981 72443254 (68770177) C LTR81A LTR/Gypsy (1067) 283 6 2482378 247 29.9 7.2 0.0 chr9 72457343 72457439 (68755992) + MamGypLTR2b LTR/Gypsy 819 922 (0) 2482407 234 24.1 9.9 2.5 chr9 72517213 72517293 (68696138) C LTR81B LTR/Gypsy (1049) 344 258 2482519 294 13.9 9.7 0.0 chr9 72517312 72517383 (68696048) C LTR81B LTR/Gypsy (1180) 213 135 2482519 463 28.5 3.2 8.4 chr9 73015226 73015509 (68197922) + MamGypLTR2c LTR/Gypsy 705 973 (95) 2483264 278 27.2 0.0 12.4 chr9 73130561 73130625 (68082806) + MamGypLTR3 LTR/Gypsy 18 71 (768) 2483491 278 27.2 0.0 12.4 chr9 73130919 73130957 (68082474) + MamGypLTR3 LTR/Gypsy 72 109 (730) 2483491 1015 30.1 8.2 4.4 chr9 73132883 73133334 (68080097) + MamGypLTR3 LTR/Gypsy 185 653 (186) 2483491 346 27.1 4.1 0.0 chr9 73134892 73135013 (68078418) + MamGypLTR3 LTR/Gypsy 698 824 (15) 2483491 493 26.8 1.9 2.5 chr9 73197951 73198107 (68015324) + MamGypLTR1c LTR/Gypsy 79 234 (569) 2483595 391 24.8 5.7 8.2 chr9 73417784 73417941 (67795490) + MamGypLTR1b LTR/Gypsy 1 154 (628) 2483923 284 39.8 0.5 1.5 chr9 73419854 73420057 (67793374) + MamGypLTR1b LTR/Gypsy 396 597 (185) 2483929 314 26.8 3.1 3.1 chr9 73420479 73420605 (67792826) + MamGypLTR1b LTR/Gypsy 656 782 (0) 2483929 298 27.3 4.8 2.0 chr9 73889619 73889733 (67323698) C MamGypLTR1b LTR/Gypsy (0) 782 684 2484580 257 22.8 8.5 11.2 chr9 73918075 73918262 (67295169) + MamGypLTR2c LTR/Gypsy 831 1013 (55) 2484620 508 34.2 9.3 1.1 chr9 74078340 74078703 (67134728) C MamGypLTR1a LTR/Gypsy (280) 504 111 2484833 284 21.6 2.4 7.2 chr9 74172303 74172427 (67041004) + MamGypLTR1b LTR/Gypsy 130 248 (534) 2484958 243 26.1 0.0 15.6 chr9 74173195 74173303 (67040128) + LTR81AB LTR/Gypsy 76 167 (111) 2484960 279 37.2 8.0 6.0 chr9 74173476 74173824 (67039607) + MamGypLTR2c LTR/Gypsy 175 530 (538) 2484962 824 28.3 16.2 5.5 chr9 75057549 75057986 (66155445) C LTR81 LTR/Gypsy (0) 1189 705 2486616 363 31.1 6.3 7.4 chr9 75087946 75088216 (66125215) C MamGypLTR1c LTR/Gypsy (10) 793 526 2486671 804 32.3 15.8 4.3 chr9 75694967 75695610 (65517821) C MamGypLTR1b LTR/Gypsy (59) 723 6 2487626 260 27.7 8.1 3.2 chr9 75796103 75796225 (65417206) C LTR81B LTR/Gypsy (49) 1344 1216 2487774 293 38.1 10.3 4.6 chr9 76042505 76042892 (65170539) + MamGypLTR1b LTR/Gypsy 163 572 (210) 2488095 855 36.9 8.3 0.7 chr9 76076094 76076500 (65136931) C MamGypLTR1b LTR/Gypsy (3) 779 342 2488147 400 25.5 2.9 0.7 chr9 76896332 76896469 (64316962) C MamGypLTR2c LTR/Gypsy (97) 971 831 2489223 668 36.5 5.1 2.2 chr9 76897533 76897941 (64315490) + MamGypLTR1c LTR/Gypsy 382 802 (1) 2489226 478 28.7 19.5 3.7 chr9 77046236 77046481 (64166950) C MamGypLTR1c LTR/Gypsy (9) 794 510 2489422 320 28.1 0.0 4.0 chr9 77843775 77843874 (63369557) C MamGypLTR1c LTR/Gypsy (7) 796 701 2490736 588 30.1 4.8 4.4 chr9 78042386 78042701 (63170730) C MamGypLTR1a LTR/Gypsy (467) 317 1 2490954 260 33.0 12.0 7.2 chr9 78046583 78047208 (63166223) + MamGypLTR3 LTR/Gypsy 139 794 (45) 2490961 359 29.9 4.4 4.1 chr9 78255685 78255949 (62957482) C MamGypLTR2b LTR/Gypsy (0) 1068 643 2491233 251 27.0 5.8 8.3 chr9 78303429 78303549 (62909882) + LTR81A LTR/Gypsy 237 354 (996) 2491279 397 35.9 8.7 4.3 chr9 78341688 78341964 (62871467) + MamGypLTR1b LTR/Gypsy 491 779 (3) 2491330 290 26.6 3.8 1.2 chr9 79219199 79219278 (61994153) + MamGypLTR1b LTR/Gypsy 484 565 (217) 2492773 314 38.2 1.5 0.7 chr9 79548120 79548256 (61665175) + MamGypLTR1b LTR/Gypsy 446 583 (199) 2493287 272 22.7 14.7 1.4 chr9 80275303 80275445 (60937986) + MamGypLTR2b LTR/Gypsy 747 908 (14) 2494458 437 34.0 1.4 2.7 chr9 80685333 80685553 (60527878) + MamGypLTR2c LTR/Gypsy 814 1031 (37) 2495012 835 32.8 6.2 4.8 chr9 80910141 80910685 (60302746) + MamGypLTR1c LTR/Gypsy 241 793 (10) 2495345 594 28.9 6.7 7.0 chr9 80997733 80998048 (60215383) C LTR81B LTR/Gypsy (9) 1384 1070 2495466 397 30.5 6.1 10.2 chr9 81178163 81178407 (60035024) C MamGypLTR3 LTR/Gypsy (60) 779 545 2495732 1205 32.3 8.6 1.7 chr9 81401577 81402287 (59811144) C MamGypLTR1a LTR/Gypsy (15) 769 10 2496025 271 34.1 6.8 2.3 chr9 81667178 81667354 (59546077) C MamGypLTR1b LTR/Gypsy (502) 280 96 2496405 249 21.8 10.1 1.3 chr9 82089139 82089217 (59124214) C LTR81C LTR/Gypsy (1057) 96 11 2496996 505 31.5 12.0 5.3 chr9 82171135 82171493 (59041938) C LTR81B LTR/Gypsy (10) 1383 1001 2497122 1054 25.9 6.0 6.0 chr9 82172260 82172421 (59041010) C LTR81B LTR/Gypsy (942) 451 271 2497122 1054 25.9 6.0 6.0 chr9 82172714 82172985 (59040446) C LTR81B LTR/Gypsy (1123) 270 17 2497122 877 31.3 11.8 5.6 chr9 82362208 82362927 (58850504) C MamGypLTR1b LTR/Gypsy (9) 773 9 2497372 611 28.0 9.7 4.6 chr9 82515943 82516377 (58697054) C LTR81B LTR/Gypsy (930) 463 7 2497579 251 23.5 9.5 3.6 chr9 82920694 82920777 (58292654) + MamGypLTR1c LTR/Gypsy 158 246 (557) 2498132 237 26.1 21.7 0.0 chr9 82921455 82921523 (58291908) + MamGypLTR1c LTR/Gypsy 507 590 (223) 2498132 1094 30.9 13.6 4.9 chr9 84886600 84887314 (56326117) + MamGypLTR1a LTR/Gypsy 8 784 (0) 2500894 259 34.0 0.0 2.8 chr9 84969333 84969441 (56243990) + MamGypLTR3 LTR/Gypsy 723 828 (11) 2500996 588 31.2 8.6 3.4 chr9 85031922 85032339 (56181092) C LTR81C LTR/Gypsy (31) 1122 683 2501061 227 30.4 10.3 4.5 chr9 85241722 85241876 (55971555) C MamGypLTR1d LTR/Gypsy (616) 197 34 2501324 225 31.6 4.4 1.5 chr9 85392917 85393051 (55820380) + MamGypLTR1d LTR/Gypsy 666 804 (9) 2501509 898 33.6 9.0 4.1 chr9 85496699 85497614 (55715817) + MamGypLTR2c LTR/Gypsy 91 973 (95) 2501677 562 33.1 13.2 1.3 chr9 85709865 85710167 (55503264) + MamGypLTR3 LTR/Gypsy 94 432 (407) 2501968 945 25.7 3.8 3.5 chr9 85710223 85710540 (55502891) + MamGypLTR3 LTR/Gypsy 516 834 (5) 2501968 229 24.6 1.6 3.2 chr9 85980673 85980735 (55232696) + MamGypLTR1d LTR/Gypsy 413 474 (339) 2502349 350 30.1 8.5 1.7 chr9 85980744 85980919 (55232512) + LTR81A LTR/Gypsy 744 931 (419) 2502350 459 27.1 3.7 4.4 chr9 85981522 85981656 (55231775) + MamGypLTR2c LTR/Gypsy 920 1053 (15) 2502352 270 31.5 7.1 3.9 chr9 86022324 86022523 (55190908) + MamGypLTR1c LTR/Gypsy 8 209 (573) 2502423 504 31.0 6.8 1.4 chr9 86023358 86023576 (55189855) + MamGypLTR1c LTR/Gypsy 556 786 (17) 2502423 1093 27.1 7.7 3.5 chr9 86077077 86077478 (55135953) C MamGypLTR1a LTR/Gypsy (10) 774 356 2502521 342 24.2 9.6 3.0 chr9 86077498 86077663 (55135768) C MamGypLTR1a LTR/Gypsy (487) 297 121 2502521 226 14.9 14.9 0.0 chr9 86178617 86178663 (55034768) C MamGypLTR1b LTR/Gypsy (596) 186 133 2502668 429 29.1 5.7 3.3 chr9 86486349 86486558 (54726873) + LTR81B LTR/Gypsy 1 215 (1178) 2503196 290 22.4 12.1 7.9 chr9 86488224 86488515 (54724916) + LTR81C LTR/Gypsy 872 1391 (2) 2503200 844 23.3 15.2 3.7 chr9 86794511 86794858 (54418573) C LTR81B LTR/Gypsy (1004) 389 2 2503756 426 32.8 7.1 0.5 chr9 86818943 86819126 (54394305) C MamGypLTR1b LTR/Gypsy (109) 673 478 2503793 249 34.6 4.3 8.9 chr9 87019018 87019274 (54194157) C MamGypLTR3 LTR/Gypsy (94) 745 501 2504177 472 28.8 11.2 6.7 chr9 87189358 87189715 (54023716) + MamGypLTR1c LTR/Gypsy 53 426 (377) 2504461 618 29.5 9.9 2.8 chr9 87205473 87205835 (54007596) C MamGypLTR2b LTR/Gypsy (11) 911 523 2504477 303 25.3 2.5 1.2 chr9 87409932 87410011 (53803420) C MamGypLTR2b LTR/Gypsy (71) 851 771 2504762 342 27.5 6.8 4.0 chr9 87645910 87646057 (53567374) C MamGypLTR1a LTR/Gypsy (0) 784 633 2505073 245 22.0 5.3 17.1 chr9 87673195 87673364 (53540067) + LTR81C LTR/Gypsy 879 1028 (125) 2505114 287 26.9 5.6 6.3 chr9 87709455 87709597 (53503834) C MamGypLTR2b LTR/Gypsy (0) 922 781 2505163 349 29.8 0.0 0.9 chr9 87842148 87842252 (53371179) + MamGypLTR3 LTR/Gypsy 299 402 (437) 2505367 446 30.2 5.3 2.9 chr9 87953039 87953246 (53260185) C MamGypLTR1b LTR/Gypsy (0) 782 570 2505500 243 36.8 2.9 4.0 chr9 87953877 87954049 (53259382) C MamGypLTR1b LTR/Gypsy (283) 499 329 2505500 286 29.9 1.3 0.0 chr9 87954084 87954160 (53259271) C MamGypLTR1b LTR/Gypsy (549) 233 156 2505500 241 29.3 6.4 1.6 chr9 87958954 87959078 (53254353) C MamGypLTR1b LTR/Gypsy (0) 782 652 2505507 260 30.1 6.4 2.9 chr9 87966107 87966246 (53247185) C MamGypLTR2c LTR/Gypsy (777) 291 147 2505520 367 27.6 5.0 5.3 chr9 88003940 88004120 (53209311) + MamGypLTR1b LTR/Gypsy 53 218 (566) 2505563 451 31.2 1.1 4.3 chr9 88004437 88004620 (53208811) + MamGypLTR1b LTR/Gypsy 605 782 (0) 2505563 442 27.2 8.8 6.9 chr9 88038133 88038347 (53175084) + LTR81B LTR/Gypsy 31 249 (29) 2505610 1290 27.2 8.4 1.6 chr9 88038347 88038772 (53174659) + LTR81B LTR/Gypsy 878 1332 (61) 2505610 291 29.3 13.2 8.4 chr9 88123421 88123596 (53089835) + MamGypLTR1a LTR/Gypsy 24 196 (588) 2505716 291 29.3 13.2 8.4 chr9 88124094 88124203 (53089228) + MamGypLTR1a LTR/Gypsy 197 324 (460) 2505716 285 18.1 6.5 5.1 chr9 88365464 88365551 (52847880) C LTR81C LTR/Gypsy (226) 963 872 2506083 333 30.8 6.8 3.6 chr9 88367172 88367420 (52846011) C LTR81B LTR/Gypsy (1135) 258 2 2506087 778 16.4 5.1 3.4 chr9 88502216 88502392 (52711039) + MamGypLTR2b LTR/Gypsy 729 908 (14) 2506335 377 24.8 15.7 2.5 chr9 88728350 88728557 (52484874) C LTR81C LTR/Gypsy (212) 1181 889 2506740 329 28.9 11.9 2.0 chr9 89002176 89002376 (52211055) C LTR81C LTR/Gypsy (31) 1122 902 2507203 349 35.4 6.3 2.2 chr9 89243811 89244079 (51969352) + MamGypLTR1a LTR/Gypsy 155 434 (350) 2507591 289 20.0 2.8 1.4 chr9 89245824 89245894 (51967537) + MamGypLTR1a LTR/Gypsy 703 774 (10) 2507598 237 25.4 12.4 2.5 chr9 89270961 89271081 (51942350) C MamGypLTR1c LTR/Gypsy (339) 464 332 2507631 458 31.9 4.6 1.9 chr9 89456996 89457070 (51756361) C MamGypLTR1c LTR/Gypsy (0) 803 725 2507904 458 31.9 4.6 1.9 chr9 89457509 89457694 (51755737) C MamGypLTR1c LTR/Gypsy (79) 724 535 2507904 258 17.8 17.1 3.8 chr9 89502393 89502497 (51710934) C MamGypLTR1b LTR/Gypsy (663) 119 1 2507967 423 33.2 10.3 3.5 chr9 89692314 89692681 (51520750) + MamGypLTR1a LTR/Gypsy 102 494 (290) 2508245 232 25.0 7.5 7.5 chr9 89792210 89792343 (51421088) + LTR81AB LTR/Gypsy 117 250 (28) 2508398 273 38.0 4.2 2.2 chr9 89804243 89804554 (51408877) C MamGypLTR1b LTR/Gypsy (4) 778 461 2508415 313 25.5 10.6 9.5 chr9 89805901 89806141 (51407290) + LTR81B LTR/Gypsy 1096 1340 (53) 2508418 313 25.5 10.6 9.5 chr9 89806441 89806462 (51406969) + LTR81B LTR/Gypsy 1341 1362 (31) 2508418 570 24.9 3.7 1.1 chr9 89950409 89950595 (51262836) + LTR81A LTR/Gypsy 20 211 (1139) 2508647 273 36.9 3.3 7.7 chr9 89950641 89950680 (51262751) + LTR81A LTR/Gypsy 306 342 (1008) 2508647 356 30.4 6.8 0.4 chr9 89950983 89951132 (51262299) + LTR81A LTR/Gypsy 383 504 (889) 2508647 282 30.2 15.1 0.0 chr9 89951193 89951311 (51262120) + LTR81C LTR/Gypsy 427 563 (590) 2508649 321 26.6 13.9 6.5 chr9 89951404 89951604 (51261827) + LTR81C LTR/Gypsy 719 934 (219) 2508649 343 29.9 10.7 3.1 chr9 89995151 89995409 (51218022) C MamGypLTR1c LTR/Gypsy (18) 904 505 2508698 505 26.1 6.9 6.5 chr9 90331794 90332039 (50881392) C LTR81A LTR/Gypsy (1099) 251 5 2509216 243 22.4 4.3 4.3 chr9 90333205 90333274 (50880157) C MamGypLTR1a LTR/Gypsy (117) 667 598 2509218 500 27.5 7.0 4.5 chr9 90333573 90333816 (50879615) C LTR81A LTR/Gypsy (1097) 253 4 2509219 532 25.6 6.9 3.5 chr9 90392575 90392776 (50820655) + LTR81A LTR/Gypsy 42 250 (1100) 2509292 261 24.4 8.7 10.9 chr9 90410564 90410701 (50802730) + LTR81A LTR/Gypsy 114 248 (1102) 2509319 491 26.8 6.4 2.1 chr9 90412621 90412807 (50800624) + LTR81A LTR/Gypsy 1 195 (1155) 2509323 296 24.4 11.5 5.4 chr9 91262725 91262854 (49950577) C MamGypLTR1d LTR/Gypsy (13) 800 663 2510784 478 33.2 7.3 0.8 chr9 91288509 91288769 (49924662) + MamGypLTR1b LTR/Gypsy 505 782 (0) 2510829 244 29.1 27.2 2.0 chr9 91326995 91327198 (49886233) + LTR81A LTR/Gypsy 181 435 (915) 2510877 257 29.8 9.5 0.9 chr9 91438214 91438318 (49775113) + LTR81B LTR/Gypsy 218 331 (1062) 2511016 462 32.9 4.2 3.8 chr9 91492762 91493125 (49720306) + LTR81A LTR/Gypsy 424 980 (370) 2511088 272 25.2 16.5 1.8 chr9 92285436 92285544 (48927887) + MamGypLTR1a LTR/Gypsy 654 778 (6) 2512045 297 28.3 10.0 2.4 chr9 92300830 92300999 (48912432) + MamGypLTR1c LTR/Gypsy 592 774 (29) 2512062 239 35.0 3.9 1.0 chr9 92340971 92341074 (48872357) C MamGypLTR3 LTR/Gypsy (73) 766 660 2512117 278 28.8 18.2 3.4 chr9 92752164 92752556 (48460875) C MamGypLTR1a LTR/Gypsy (38) 746 279 2512333 356 29.7 19.0 3.4 chr9 92766629 92766949 (48446482) C MamGypLTR1b LTR/Gypsy (8) 774 404 2512345 231 30.4 2.0 0.0 chr9 92778516 92778617 (48434814) C LTR81A LTR/Gypsy (163) 990 887 2512368 794 26.7 11.8 1.9 chr9 92779060 92779372 (48434059) C LTR81A LTR/Gypsy (1006) 344 1 2512368 262 27.3 16.6 5.0 chr9 92834721 92834901 (48378530) C LTR81 LTR/Gypsy (411) 778 577 2512438 246 30.0 6.3 5.7 chr9 93205435 93205593 (48007838) C MamGypLTR1a LTR/Gypsy (27) 757 598 2512902 311 25.0 5.2 4.5 chr9 93488227 93488360 (47725071) C LTR81A LTR/Gypsy (982) 368 234 2513274 605 29.6 9.1 2.6 chr9 94343563 94343978 (46869453) C LTR81A LTR/Gypsy (890) 460 18 2514436 353 25.0 9.4 2.8 chr9 94528137 94528317 (46685114) C MamGypLTR2b LTR/Gypsy (14) 908 716 2514729 316 33.1 22.1 1.6 chr9 94728891 94729209 (46484222) C LTR81B LTR/Gypsy (243) 1150 766 2514995 764 25.1 8.3 4.2 chr9 94830993 94831309 (46382122) + LTR81AB LTR/Gypsy 3 335 (1015) 2515156 416 30.7 5.1 11.6 chr9 95581934 95581969 (45631462) C MamGypLTR3 LTR/Gypsy (30) 809 782 2516237 416 30.7 5.1 11.6 chr9 95582076 95582373 (45631058) C MamGypLTR3 LTR/Gypsy (58) 781 497 2516237 263 25.0 6.6 0.0 chr9 96137606 96137681 (45075750) C LTR81A LTR/Gypsy (1257) 93 13 2517018 436 25.9 10.9 1.4 chr9 96902944 96903133 (44310298) C MamGypLTR1c LTR/Gypsy (18) 785 562 2517999 267 31.3 17.6 3.9 chr9 96944811 96945146 (44268285) + MamGypLTR2c LTR/Gypsy 46 427 (641) 2518076 262 25.0 12.9 1.2 chr9 96946226 96946310 (44267121) + MamGypLTR2c LTR/Gypsy 887 981 (87) 2518076 416 27.2 6.3 11.4 chr9 98105138 98105452 (43107979) + LTR81B LTR/Gypsy 1046 1344 (49) 2519892 480 15.9 2.6 6.1 chr9 98314822 98314935 (42898496) C MamGypLTR1d LTR/Gypsy (702) 111 2 2520202 548 26.1 6.2 10.7 chr9 98548667 98549091 (42664340) C LTR81C LTR/Gypsy (14) 1139 753 2520570 403 27.3 11.4 4.2 chr9 99001520 99001783 (42211648) + LTR81B LTR/Gypsy 1101 1383 (10) 2521261 397 31.6 3.9 7.8 chr9 99956275 99956531 (41256900) + MamGypLTR3 LTR/Gypsy 498 744 (95) 2522928 333 27.2 3.8 1.9 chr9 100121363 100121467 (41091964) C LTR81B LTR/Gypsy (18) 1375 1269 2523183 253 18.2 1.4 5.7 chr9 101286123 101286192 (39927239) + MamGypLTR1b LTR/Gypsy 682 748 (34) 2525385 458 31.1 10.9 2.8 chr9 101600312 101600559 (39612872) C MamGypLTR3 LTR/Gypsy (0) 839 572 2526022 464 32.8 14.6 5.6 chr9 101953395 101954086 (39259345) + LTR81C LTR/Gypsy 277 1030 (123) 2526667 260 34.4 16.6 0.9 chr9 102095756 102096104 (39117327) + LTR81 LTR/Gypsy 520 1113 (237) 2526914 561 25.2 4.1 5.3 chr9 102096346 102096588 (39116843) C LTR81A LTR/Gypsy (1108) 242 3 2526915 269 32.7 5.9 0.0 chr9 102101131 102101283 (39112148) + MamGypLTR1b LTR/Gypsy 590 751 (31) 2526923 355 30.6 4.6 10.9 chr9 102530935 102531238 (38682193) + MamGypLTR3 LTR/Gypsy 505 789 (50) 2527686 470 34.2 8.9 6.3 chr9 103484841 103485189 (37728242) C MamGypLTR3 LTR/Gypsy (2) 837 480 2529238 425 26.5 4.7 5.7 chr9 103712382 103712593 (37500838) + MamGypLTR1d LTR/Gypsy 1 210 (603) 2529548 315 28.8 0.0 4.3 chr9 103988567 103988682 (37224749) + MamGypLTR1a LTR/Gypsy 54 164 (620) 2529953 1076 30.7 11.3 5.8 chr9 103989022 103989560 (37223871) + MamGypLTR1a LTR/Gypsy 151 734 (48) 2529953 244 28.1 0.0 9.2 chr9 104068421 104068518 (37144913) C MamGypLTR2c LTR/Gypsy (622) 446 358 2530065 255 24.1 5.8 11.6 chr9 104115968 104116122 (37097309) + LTR81AB LTR/Gypsy 7 152 (126) 2530141 225 31.9 0.0 1.4 chr9 104355270 104355342 (36858089) + MamGypLTR3 LTR/Gypsy 302 373 (466) 2530485 343 24.1 4.8 1.2 chr9 104509866 104509949 (36703482) C MamGypLTR2c LTR/Gypsy (38) 1030 944 2530709 245 39.2 3.3 2.8 chr9 104510161 104510341 (36703090) C LTR81 LTR/Gypsy (542) 647 466 2530710 244 32.9 14.0 2.3 chr9 104511181 104511351 (36702080) C MamGypLTR2c LTR/Gypsy (859) 209 19 2530712 254 35.9 5.3 0.8 chr9 104757453 104757584 (36455847) + MamGypLTR1d LTR/Gypsy 342 479 (324) 2531061 361 31.5 11.8 0.7 chr9 104757782 104758031 (36455400) + MamGypLTR1d LTR/Gypsy 523 803 (10) 2531061 472 33.7 11.5 3.5 chr9 104799625 104800049 (36413382) C LTR81B LTR/Gypsy (924) 469 11 2531103 225 27.9 1.0 4.1 chr9 105796743 105796839 (35416592) + LTR81C LTR/Gypsy 1060 1153 (0) 2532413 321 25.2 9.4 5.1 chr9 106309098 106309235 (34904196) C LTR81B LTR/Gypsy (26) 1324 1181 2533099 251 36.3 6.0 6.0 chr9 106309312 106309563 (34903868) C LTR81B LTR/Gypsy (178) 1172 921 2533099 533 30.6 6.6 5.2 chr9 106310018 106310556 (34902875) C LTR81B LTR/Gypsy (784) 566 13 2533099 426 33.4 11.0 5.9 chr9 106725611 106725947 (34487484) + MamGypLTR1a LTR/Gypsy 431 784 (0) 2533654 362 31.1 12.1 8.7 chr9 106772889 106773244 (34440187) + MamGypLTR2b LTR/Gypsy 493 860 (62) 2533713 443 34.7 10.8 2.3 chr9 107001289 107001630 (34211801) C LTR81C LTR/Gypsy (419) 734 364 2534038 232 28.4 0.0 6.3 chr9 107062909 107062987 (34150444) C MamGypLTR2c LTR/Gypsy (993) 75 2 2534145 417 34.2 9.0 6.5 chr9 107152686 107153150 (34060281) C MamGypLTR1b LTR/Gypsy (277) 505 29 2534283 291 27.4 2.1 2.1 chr9 107701728 107701824 (33511607) C MamGypLTR3 LTR/Gypsy (45) 794 698 2535119 262 29.2 0.0 8.2 chr9 107851840 107851917 (33361514) C MamGypLTR3 LTR/Gypsy (475) 364 293 2535438 262 29.2 0.0 8.2 chr9 107852417 107852434 (33360997) C MamGypLTR3 LTR/Gypsy (547) 292 276 2535438 256 35.6 10.2 0.7 chr9 108217166 108217312 (32996119) C MamGyp-int LTR/Gypsy (158) 4904 4744 2536157 400 25.0 0.0 1.2 chr9 108217732 108217816 (32995615) C MamGyp-int LTR/Gypsy (505) 4557 4474 2536157 278 39.3 4.7 0.0 chr9 108218148 108218338 (32995093) C MamGyp-int LTR/Gypsy (623) 4439 4240 2536157 353 29.8 5.3 0.0 chr9 108219018 108219111 (32994320) C MamGyp-int LTR/Gypsy (2239) 2823 2725 2536157 386 22.2 6.5 2.2 chr9 108219267 108219358 (32994073) C MamGyp-int LTR/Gypsy (2490) 2572 2477 2536157 352 35.9 2.5 2.5 chr9 108222061 108222220 (32991211) C MamGyp-int LTR/Gypsy (4354) 708 549 2536157 675 28.2 8.8 5.1 chr9 108874758 108875108 (32338323) + MamGypLTR1b LTR/Gypsy 91 454 (328) 2537059 331 33.8 3.9 3.4 chr9 109003636 109003843 (32209588) C MamGypLTR3 LTR/Gypsy (33) 806 598 2537246 227 34.7 9.8 3.8 chr9 109004103 109004285 (32209146) C MamGypLTR3 LTR/Gypsy (366) 473 280 2537246 479 35.2 3.5 5.3 chr9 109174710 109174991 (32038440) C MamGypLTR1c LTR/Gypsy (0) 803 527 2537497 234 37.6 2.2 2.2 chr9 109175135 109175270 (32038161) C MamGypLTR1c LTR/Gypsy (331) 482 347 2537497 313 26.6 8.2 6.4 chr9 109406273 109406444 (31806987) C LTR81C LTR/Gypsy (4) 1389 1255 2537857 557 33.7 4.4 2.5 chr9 109406528 109406840 (31806591) C LTR81C LTR/Gypsy (223) 1170 628 2537857 443 33.5 7.2 6.8 chr9 109406837 109407128 (31806303) C LTR81B LTR/Gypsy (582) 811 519 2537858 702 24.2 6.5 6.3 chr9 109790812 109791192 (31422239) C MamGypLTR2b LTR/Gypsy (0) 1068 701 2538415 428 37.9 5.7 1.3 chr9 109829485 109829711 (31383720) + MamGyp-int LTR/Gypsy 3117 3353 (1709) 2538481 457 30.5 10.4 4.4 chr9 109829779 109829941 (31383490) + MamGyp-int LTR/Gypsy 4174 4352 (710) 2538481 457 30.5 10.4 4.4 chr9 109830369 109830386 (31383045) + MamGyp-int LTR/Gypsy 4353 4366 (696) 2538481 586 32.9 3.7 2.4 chr9 109830514 109830759 (31382672) C MamGyp-int LTR/Gypsy (29) 5033 4785 2538483 627 29.7 2.7 1.8 chr9 109874038 109874260 (31339171) C MamGypLTR1b LTR/Gypsy (555) 227 3 2538562 634 32.1 10.2 6.8 chr9 110483315 110483391 (30730040) + MamGypLTR1a LTR/Gypsy 250 330 (473) 2539890 722 31.1 10.3 5.3 chr9 110483705 110484156 (30729275) + MamGypLTR1a LTR/Gypsy 319 795 (8) 2539890 265 28.3 7.1 5.8 chr9 110586319 110586447 (30626984) C LTR81A LTR/Gypsy (68) 1282 1152 2540112 233 29.4 1.4 1.4 chr9 110640677 110640745 (30572686) C MamGypLTR3 LTR/Gypsy (40) 799 731 2540215 362 30.7 7.3 6.4 chr9 110787429 110787647 (30425784) + LTR81A LTR/Gypsy 14 234 (1116) 2540508 227 30.7 11.9 3.4 chr9 110788234 110788351 (30425080) + LTR81A LTR/Gypsy 251 378 (775) 2540508 228 13.5 0.0 0.0 chr9 110806648 110806684 (30406747) + MamGypLTR1b LTR/Gypsy 3 39 (743) 2540534 529 30.5 12.7 2.2 chr9 110922360 110922634 (30290797) C MamGypLTR1b LTR/Gypsy (8) 774 471 2540711 607 35.0 10.1 5.7 chr9 111119336 111119811 (30093620) C MamGypLTR2c LTR/Gypsy (533) 535 39 2541023 290 23.2 4.8 2.4 chr9 112066159 112066242 (29147189) + MamGypLTR1d LTR/Gypsy 41 126 (687) 2542610 282 22.1 7.8 7.8 chr9 112301454 112301508 (28911923) C MamGypLTR2c LTR/Gypsy (0) 1068 1018 2543109 282 22.1 7.8 7.8 chr9 112301903 112301981 (28911450) C MamGypLTR2c LTR/Gypsy (57) 1011 927 2543109 321 34.3 0.9 0.0 chr9 112466189 112466296 (28747135) C MamGypLTR1b LTR/Gypsy (160) 622 514 2543354 352 18.8 6.2 1.2 chr9 112520885 112520965 (28692466) C LTR81A LTR/Gypsy (0) 1350 1266 2543445 920 26.0 11.4 1.6 chr9 112731689 112732055 (28481376) C MamGypLTR1a LTR/Gypsy (1) 783 381 2543781 226 26.1 4.7 9.4 chr9 113207029 113207155 (28006276) + MamGypLTR1a LTR/Gypsy 1 121 (663) 2544615 338 31.5 24.3 3.5 chr9 113207239 113207662 (28005769) + MamGypLTR1a LTR/Gypsy 273 784 (0) 2544615 505 30.9 8.1 2.2 chr9 113315407 113315677 (27897754) + MamGypLTR2b LTR/Gypsy 584 870 (52) 2544800 449 33.4 10.0 5.9 chr9 113544868 113545207 (27668224) C MamGypLTR3 LTR/Gypsy (7) 832 479 2545145 1172 32.3 6.8 5.3 chr9 113579998 113580560 (27632871) C MamGypLTR1b LTR/Gypsy (127) 655 85 2545191 335 29.5 14.1 7.7 chr9 113581501 113581812 (27631619) + MamGypLTR3 LTR/Gypsy 497 828 (11) 2545193 417 33.0 12.7 2.5 chr9 113582075 113582319 (27631112) C LTR81B LTR/Gypsy (263) 1130 861 2545194 408 21.7 4.3 7.9 chr9 113629842 113629981 (27583450) + MamGypLTR1d LTR/Gypsy 6 140 (673) 2545263 566 30.8 16.2 2.5 chr9 113812792 113813224 (27400207) + MamGypLTR1c LTR/Gypsy 3 494 (309) 2545541 344 24.6 29.5 4.7 chr9 113826483 113826781 (27386650) + LTR81A LTR/Gypsy 102 474 (876) 2545566 295 34.5 10.5 3.5 chr9 113826864 113827091 (27386340) + LTR81 LTR/Gypsy 405 648 (541) 2545567 308 28.4 6.8 4.1 chr9 113942076 113942222 (27271209) + MamGypLTR3 LTR/Gypsy 546 696 (143) 2545772 422 34.6 7.9 1.1 chr9 113972555 113972820 (27240611) + MamGypLTR1d LTR/Gypsy 475 758 (55) 2545809 717 34.7 3.9 1.7 chr9 114069531 114069940 (27143491) C MamGyp-int LTR/Gypsy (2240) 2822 2404 2545981 874 26.2 12.8 2.2 chr9 114346958 114347277 (26866154) + MamGypLTR2b LTR/Gypsy 569 922 (0) 2546471 964 31.6 7.8 3.1 chr9 114578997 114579482 (26633949) + MamGypLTR2c LTR/Gypsy 3 511 (557) 2546902 790 26.7 8.2 9.9 chr9 114581241 114581705 (26631726) + MamGypLTR2c LTR/Gypsy 598 1054 (14) 2546902 267 25.0 2.4 4.8 chr9 114618079 114618162 (26595269) C MamGypLTR2c LTR/Gypsy (536) 532 451 2546987 343 25.0 6.8 3.8 chr9 114749574 114749649 (26463782) C MamGypLTR1b LTR/Gypsy (2) 780 701 2547249 343 25.0 6.8 3.8 chr9 114749936 114749991 (26463440) C MamGypLTR1b LTR/Gypsy (82) 700 644 2547249 364 34.0 0.6 2.5 chr9 114773467 114773623 (26439808) C MamGypLTR1b LTR/Gypsy (7) 775 622 2547300 405 30.8 7.4 4.0 chr9 114774108 114774283 (26439148) C MamGypLTR1b LTR/Gypsy (323) 459 278 2547300 267 33.3 5.5 1.1 chr9 115133822 115133912 (26079519) C MamGypLTR3 LTR/Gypsy (131) 708 614 2547988 752 30.1 5.8 5.0 chr9 115686584 115686946 (25526485) + MamGypLTR3 LTR/Gypsy 49 414 (425) 2549012 255 22.1 6.0 5.0 chr9 116447873 116447972 (24765459) + MamGypLTR1b LTR/Gypsy 678 778 (4) 2550389 347 26.5 13.4 5.4 chr9 116507507 116507819 (24705612) C LTR81B LTR/Gypsy (845) 505 142 2550519 896 31.7 11.3 7.0 chr9 116899981 116900448 (24312983) + MamGypLTR1b LTR/Gypsy 305 792 (11) 2551212 435 31.3 15.5 0.9 chr9 117508666 117508878 (23704553) + LTR81C LTR/Gypsy 797 1040 (113) 2552517 318 28.7 0.9 1.2 chr9 117763991 117764106 (23449325) + LTR81AB LTR/Gypsy 177 291 (1102) 2552983 237 23.4 12.7 9.9 chr9 117765307 117765448 (23447983) + LTR81B LTR/Gypsy 1092 1237 (156) 2552985 269 37.6 11.4 1.2 chr9 117892115 117892359 (23321072) + MamGypLTR1b LTR/Gypsy 475 744 (38) 2553215 288 23.9 0.0 1.5 chr9 118078769 118078836 (23134595) C LTR81A LTR/Gypsy (0) 1350 1284 2553531 258 33.0 0.0 1.1 chr9 118285016 118285110 (22928321) C MamGypLTR3 LTR/Gypsy (2) 837 744 2553864 669 35.1 10.0 3.0 chr9 118285282 118285839 (22927592) C MamGypLTR3 LTR/Gypsy (214) 625 29 2553864 284 34.6 8.2 3.1 chr9 119351805 119351998 (21861433) C MamGypLTR3 LTR/Gypsy (242) 597 394 2555779 249 23.1 19.9 6.6 chr9 119504437 119504576 (21708855) + LTR81C LTR/Gypsy 154 317 (1033) 2556064 305 30.5 1.7 7.3 chr9 119505186 119505362 (21708069) + LTR81C LTR/Gypsy 675 841 (312) 2556064 317 30.8 12.4 2.8 chr9 120562161 120562337 (20651094) + MamGypLTR3 LTR/Gypsy 646 839 (0) 2558135 261 30.7 1.1 0.0 chr9 122353803 122353890 (18859541) + MamGypLTR1d LTR/Gypsy 708 796 (17) 2561301 367 29.3 6.6 6.7 chr9 122666557 122666928 (18546503) + LTR81A LTR/Gypsy 11 378 (972) 2561896 333 34.5 1.6 4.8 chr9 122711697 122711882 (18501549) + MamGypLTR2c LTR/Gypsy 6 185 (883) 2561989 578 29.5 10.2 5.9 chr9 122712508 122713082 (18500349) + MamGypLTR2c LTR/Gypsy 426 1067 (1) 2561989 337 26.4 12.1 1.3 chr9 122881094 122881250 (18332181) + MamGypLTR1c LTR/Gypsy 615 788 (15) 2562342 1511 28.6 8.2 5.2 chr9 123407370 123407969 (17805462) + MamGypLTR3 LTR/Gypsy 170 787 (52) 2563335 237 29.7 6.6 2.5 chr9 124022498 124022618 (17190813) + MamGypLTR3 LTR/Gypsy 626 751 (88) 2564524 499 30.3 10.2 1.9 chr9 125141569 125141824 (16071607) C MamGypLTR3 LTR/Gypsy (16) 823 547 2566793 422 31.0 25.2 8.0 chr9 127889107 127889684 (13323747) + MamGypLTR1b LTR/Gypsy 2 697 (85) 2571666 422 32.3 17.4 9.4 chr9 127889809 127889903 (13323528) + MamGypLTR1b LTR/Gypsy 698 782 (0) 2571666 425 30.6 11.7 5.3 chr9 128771467 128771766 (12441665) + MamGypLTR3 LTR/Gypsy 487 805 (34) 2573358 239 29.6 15.0 2.3 chr9 128788599 128788771 (12424660) C MamGypLTR2b LTR/Gypsy (52) 870 676 2573392 323 36.0 1.5 0.7 chr9 129971004 129971140 (11242291) + MamGyp-int LTR/Gypsy 2679 2816 (2246) 2575430 1392 31.9 8.6 7.1 chr9 130076062 130076945 (11136486) C LTR81C LTR/Gypsy (142) 1011 115 2575593 272 26.1 0.0 0.0 chr9 130116999 130117063 (11096368) C MamGypLTR1d LTR/Gypsy (0) 813 749 2575648 257 25.9 17.9 1.4 chr9 130117373 130117517 (11095914) C MamGypLTR1d LTR/Gypsy (42) 771 603 2575648 252 25.6 6.9 1.1 chr9 130368853 130368939 (10844492) C MamGypLTR1b LTR/Gypsy (7) 775 684 2576208 375 28.6 4.2 6.6 chr9 132033951 132034163 (9179268) C MamGypLTR2c LTR/Gypsy (572) 496 289 2579928 280 29.2 6.2 0.0 chr9 132870673 132870768 (8342663) C MamGypLTR1b LTR/Gypsy (2) 780 679 2581767 434 28.6 20.4 4.6 chr9 133659704 133660070 (7553361) C LTR81C LTR/Gypsy (0) 1153 729 2583084 228 23.6 2.7 1.4 chr9 133662020 133662092 (7551339) C LTR81C LTR/Gypsy (959) 194 121 2583089 225 33.3 2.5 3.4 chr9 134206682 134206799 (7006632) C LTR81C LTR/Gypsy (881) 272 156 2584111 495 27.3 15.7 1.7 chr9 138300969 138301203 (2912228) + MamGypLTR2c LTR/Gypsy 715 982 (86) 2590179 231 16.3 0.0 5.8 chr10 127852 127903 (135406844) + LTR81AB LTR/Gypsy 194 242 (36) 2593706 271 33.0 7.7 4.7 chr10 1015886 1016120 (134518627) + MamGypLTR1b LTR/Gypsy 520 761 (21) 2594725 233 23.5 12.7 4.2 chr10 2018048 2018189 (133516558) + MamGypLTR2b LTR/Gypsy 760 913 (9) 2595790 275 21.4 4.3 4.3 chr10 2713845 2713937 (132820810) C MamGyp-int LTR/Gypsy (1358) 3704 3612 2596710 244 23.9 4.4 1.5 chr10 4008548 4008615 (131526132) C LTR81 LTR/Gypsy (971) 218 149 2598538 225 19.8 15.7 7.8 chr10 4008647 4008761 (131525986) C LTR81AB LTR/Gypsy (2) 276 153 2598539 272 34.2 4.6 8.0 chr10 4516757 4516994 (131017753) + MamGyp-int LTR/Gypsy 4765 4994 (68) 2599180 271 31.5 9.8 0.6 chr10 4823728 4823890 (130710857) C MamGypLTR2c LTR/Gypsy (28) 1040 863 2599577 346 29.3 1.8 5.4 chr10 4860291 4860456 (130674291) C MamGypLTR1a LTR/Gypsy (624) 160 1 2599620 335 28.1 11.6 1.6 chr10 5565476 5565683 (129969064) C MamGypLTR1b LTR/Gypsy (581) 232 1 2600523 539 23.7 7.6 1.3 chr10 5639824 5639981 (129894766) + MamGypLTR1c LTR/Gypsy 103 270 (533) 2600619 258 33.3 5.3 2.0 chr10 5640906 5641055 (129893692) + MamGypLTR1d LTR/Gypsy 659 813 (0) 2600622 275 24.6 2.9 0.0 chr10 6027939 6028007 (129506740) C MamGypLTR1a LTR/Gypsy (28) 756 686 2601309 305 30.6 4.3 10.6 chr10 6037476 6037636 (129497111) C MamGypLTR3 LTR/Gypsy (200) 639 489 2601327 360 22.3 5.5 10.3 chr10 6039343 6039487 (129495260) + LTR81B LTR/Gypsy 5 142 (1208) 2601330 416 20.0 9.0 5.6 chr10 6040543 6040673 (129494074) + LTR81B LTR/Gypsy 165 308 (1042) 2601330 576 30.4 8.2 4.1 chr10 6324519 6324834 (129209913) + MamGypLTR2c LTR/Gypsy 714 1042 (26) 2601849 338 20.9 9.0 14.2 chr10 6325239 6325372 (129209375) + MamGypLTR1d LTR/Gypsy 76 202 (611) 2601851 482 32.2 12.2 1.7 chr10 6342757 6343044 (129191703) + MamGypLTR1b LTR/Gypsy 161 478 (304) 2601880 275 29.2 7.2 10.3 chr10 6396933 6397195 (129137552) + LTR81C LTR/Gypsy 11 265 (888) 2601981 273 29.8 7.9 9.2 chr10 6397798 6398037 (129136710) + LTR81C LTR/Gypsy 11 247 (906) 2601983 240 20.4 1.2 4.1 chr10 6529160 6529242 (129005505) + MamGypLTR1d LTR/Gypsy 706 811 (2) 2602166 245 30.5 6.0 1.2 chr10 6834432 6834597 (128700150) C MamGypLTR2b LTR/Gypsy (15) 907 734 2602630 229 28.8 8.2 0.0 chr10 6958092 6958164 (128576583) + LTR81A LTR/Gypsy 1269 1347 (3) 2602808 249 29.4 13.5 6.5 chr10 7718050 7718263 (127816484) C MamGypLTR2c LTR/Gypsy (91) 977 749 2603906 518 33.8 11.2 5.4 chr10 8882469 8882950 (126651797) C MamGypLTR2c LTR/Gypsy (540) 528 19 2605828 274 30.0 1.4 4.8 chr10 9971773 9971919 (125562828) C MamGypLTR1a LTR/Gypsy (12) 772 631 2607351 244 30.0 8.9 8.0 chr10 9973674 9973898 (125560849) C MamGypLTR1a LTR/Gypsy (516) 287 61 2607351 323 29.7 10.4 5.0 chr10 10820330 10820531 (124714216) + MamGypLTR1c LTR/Gypsy 582 794 (9) 2608485 660 29.5 9.0 2.7 chr10 11684957 11685256 (123849491) C MamGypLTR1b LTR/Gypsy (39) 743 425 2609594 351 19.2 17.4 7.5 chr10 11759307 11759499 (123775248) C MamGypLTR2b LTR/Gypsy (6) 1062 704 2609747 239 18.3 15.5 2.4 chr10 11783875 11783958 (123750789) C MamGypLTR2b LTR/Gypsy (27) 895 801 2609784 463 31.4 13.2 6.7 chr10 13138556 13139144 (122395603) C MamGypLTR1a LTR/Gypsy (152) 630 1 2612389 243 24.1 1.7 1.7 chr10 13317187 13317245 (122217502) C MamGypLTR1a LTR/Gypsy (552) 232 174 2612723 497 31.4 1.1 4.4 chr10 13549065 13549247 (121985500) + MamGypLTR3 LTR/Gypsy 656 832 (7) 2613168 274 31.7 2.9 0.0 chr10 13940453 13940556 (121594191) + MamGypLTR1b LTR/Gypsy 661 767 (15) 2613815 343 26.0 10.0 9.2 chr10 14193769 14193997 (121340750) + MamGypLTR1b LTR/Gypsy 5 235 (549) 2614224 463 29.6 21.9 3.0 chr10 14194857 14195295 (121339452) + MamGypLTR1b LTR/Gypsy 261 782 (0) 2614224 578 18.0 4.9 9.2 chr10 14303081 14303264 (121231483) C LTR81AB LTR/Gypsy (102) 176 1 2614397 235 29.3 6.0 1.0 chr10 14755357 14755456 (120779291) + LTR81A LTR/Gypsy 68 172 (981) 2615139 1307 30.5 13.8 1.6 chr10 14756208 14756880 (120777867) + LTR81A LTR/Gypsy 596 1350 (0) 2615139 261 28.4 6.2 0.0 chr10 15682661 15682741 (119852006) + MamGypLTR2c LTR/Gypsy 410 495 (573) 2616758 454 23.3 11.7 2.5 chr10 15683224 15683386 (119851361) + MamGypLTR2c LTR/Gypsy 865 1042 (26) 2616758 681 26.5 6.2 2.1 chr10 16089625 16089867 (119444880) C LTR81C LTR/Gypsy (23) 1130 878 2617333 244 36.1 4.3 4.8 chr10 16318853 16319068 (119215679) + LTR81 LTR/Gypsy 15 229 (924) 2617648 244 36.1 4.3 4.8 chr10 16319412 16319424 (119215323) + LTR81 LTR/Gypsy 230 242 (911) 2617648 289 29.4 18.7 3.4 chr10 16320049 16320315 (119214432) + LTR81 LTR/Gypsy 880 1187 (2) 2617648 471 27.5 13.7 4.8 chr10 16388077 16388389 (119146358) C LTR81B LTR/Gypsy (1) 1392 1052 2617774 254 29.8 5.7 9.0 chr10 16401125 16401301 (119133446) C LTR81B LTR/Gypsy (1064) 329 159 2617797 274 19.7 10.1 3.8 chr10 16517437 16517515 (119017232) + MamGypLTR1a LTR/Gypsy 60 143 (641) 2618035 488 24.2 14.5 6.0 chr10 17491379 17491660 (118043087) + LTR81B LTR/Gypsy 1 306 (1087) 2619460 364 26.7 0.0 3.8 chr10 17493676 17493780 (118040967) + LTR81 LTR/Gypsy 1089 1189 (0) 2619465 272 13.5 5.9 12.9 chr10 17554267 17554351 (117980396) C MamGypLTR3 LTR/Gypsy (206) 633 555 2619578 723 24.4 4.4 1.5 chr10 18228725 18228928 (117305819) + MamGypLTR1a LTR/Gypsy 57 266 (518) 2620681 273 27.6 14.8 4.9 chr10 19578725 19578935 (115955812) C LTR81A LTR/Gypsy (1173) 220 7 2622741 279 31.7 9.4 2.6 chr10 19981520 19981710 (115553037) + MamGypLTR1a LTR/Gypsy 2 205 (579) 2623343 407 34.3 7.8 4.7 chr10 19984235 19984293 (115550454) + MamGypLTR1a LTR/Gypsy 347 400 (384) 2623343 407 34.3 7.8 4.7 chr10 19984976 19985340 (115549407) + MamGypLTR1a LTR/Gypsy 401 784 (0) 2623343 487 26.0 2.2 14.6 chr10 20608219 20608533 (114926214) C MamGypLTR1c LTR/Gypsy (500) 303 28 2624283 308 31.4 12.3 1.8 chr10 21220432 21220658 (114314089) + MamGypLTR1b LTR/Gypsy 296 546 (236) 2625075 334 31.5 6.0 2.7 chr10 21300213 21300395 (114234352) C LTR81B LTR/Gypsy (8) 1385 1197 2625180 617 25.0 3.2 2.6 chr10 21540184 21540372 (113994375) C LTR81A LTR/Gypsy (45) 1108 919 2625572 964 22.4 5.0 1.7 chr10 21541059 21541298 (113993449) C LTR81A LTR/Gypsy (1067) 283 36 2625572 434 27.8 10.3 5.9 chr10 21739318 21739520 (113795227) C MamGypLTR1c LTR/Gypsy (0) 803 592 2626044 367 33.6 1.5 13.6 chr10 21762634 21762745 (113772002) + MamGypLTR3 LTR/Gypsy 493 584 (255) 2626101 367 33.6 1.5 13.6 chr10 21763043 21763201 (113771546) + MamGypLTR3 LTR/Gypsy 585 731 (108) 2626101 263 31.7 0.0 5.5 chr10 22323813 22323922 (113210825) + LTR81AB LTR/Gypsy 76 179 (99) 2627035 374 30.9 3.1 1.9 chr10 23014391 23014600 (112520147) C MamGypLTR2b LTR/Gypsy (1) 1067 757 2627995 283 24.0 8.2 10.9 chr10 23354159 23354321 (112180426) C LTR81 LTR/Gypsy (120) 1033 868 2628500 586 33.9 9.0 1.9 chr10 23354406 23354661 (112180086) C LTR81 LTR/Gypsy (500) 689 416 2628500 319 27.3 7.6 8.5 chr10 23537349 23537584 (111997163) + MamGypLTR2b LTR/Gypsy 667 900 (22) 2628783 280 36.6 3.5 0.0 chr10 24110687 24110828 (111423919) C MamGypLTR1b LTR/Gypsy (122) 660 514 2629756 228 16.1 1.7 6.7 chr10 24633528 24633587 (110901160) + MamGypLTR2c LTR/Gypsy 865 921 (147) 2630555 324 29.6 15.4 6.3 chr10 25074312 25074643 (110460104) + MamGypLTR1d LTR/Gypsy 331 693 (120) 2631299 340 18.1 5.3 1.1 chr10 25444511 25444605 (110090142) + MamGypLTR1c LTR/Gypsy 104 202 (601) 2631964 264 27.8 2.7 1.4 chr10 25444962 25445034 (110089713) + MamGypLTR1c LTR/Gypsy 345 418 (395) 2631964 422 35.7 8.3 1.3 chr10 25445812 25446123 (110088624) + MamGypLTR1c LTR/Gypsy 457 790 (13) 2631964 1051 30.7 12.0 3.4 chr10 25920130 25920804 (109613943) C LTR81B LTR/Gypsy (250) 1143 411 2632578 274 31.0 3.3 4.6 chr10 25921262 25921413 (109613334) C LTR81B LTR/Gypsy (1200) 193 44 2632578 225 31.4 6.5 7.5 chr10 25994709 25994908 (109539839) C MamGypLTR1c LTR/Gypsy (61) 742 545 2632701 610 25.2 2.8 7.6 chr10 26289227 26289514 (109245233) + LTR81B LTR/Gypsy 1 274 (1119) 2633133 251 25.1 16.6 9.6 chr10 26290599 26290628 (109244119) + LTR81B LTR/Gypsy 1078 1109 (241) 2633133 251 25.1 16.6 9.6 chr10 26290915 26291112 (109243635) + LTR81B LTR/Gypsy 1110 1322 (28) 2633133 1314 30.0 10.4 1.7 chr10 26466220 26466853 (109067894) C MamGypLTR1a LTR/Gypsy (95) 689 1 2633351 530 23.2 5.3 11.2 chr10 26669945 26670114 (108864633) C MamGypLTR2c LTR/Gypsy (126) 942 783 2633633 661 37.5 8.6 5.1 chr10 27158843 27159257 (108375490) + LTR81A LTR/Gypsy 10 433 (917) 2634560 661 37.5 8.6 5.1 chr10 27159559 27160084 (108374663) + LTR81A LTR/Gypsy 434 984 (366) 2634560 257 30.5 4.7 0.9 chr10 27175899 27176004 (108358743) + MamGypLTR1c LTR/Gypsy 66 175 (628) 2634600 422 32.2 4.8 3.8 chr10 27378024 27378233 (108156514) + MamGypLTR3 LTR/Gypsy 497 708 (131) 2634917 246 33.7 4.0 8.8 chr10 27625213 27625541 (107909206) + MamGypLTR3 LTR/Gypsy 497 809 (30) 2635379 394 31.2 9.3 2.8 chr10 28120614 28120961 (107413786) C LTR81 LTR/Gypsy (376) 777 394 2636138 500 27.7 6.4 4.9 chr10 28184702 28184967 (107349780) + LTR81B LTR/Gypsy 3 272 (1121) 2636229 410 25.2 0.0 7.5 chr10 28708181 28708300 (106826447) + LTR81AB LTR/Gypsy 11 121 (157) 2637117 819 32.8 8.8 5.0 chr10 28713284 28713889 (106820858) C MamGypLTR2c LTR/Gypsy (7) 1061 433 2637129 257 28.1 5.2 0.0 chr10 28756465 28756560 (106778187) + MamGypLTR1a LTR/Gypsy 648 748 (36) 2637224 249 29.6 16.2 1.7 chr10 28757799 28757977 (106776770) C MamGypLTR2b LTR/Gypsy (566) 356 152 2637227 469 24.5 3.2 2.0 chr10 28759592 28759767 (106774980) C MamGypLTR1d LTR/Gypsy (21) 901 632 2637231 290 32.9 8.1 8.1 chr10 28760153 28760370 (106774377) + MamGypLTR2c LTR/Gypsy 7 228 (840) 2637232 290 32.9 8.1 8.1 chr10 28760509 28760646 (106774101) + MamGypLTR2c LTR/Gypsy 229 362 (706) 2637232 238 21.1 0.0 3.7 chr10 28761111 28761164 (106773583) + MamGypLTR1a LTR/Gypsy 733 784 (0) 2637234 225 31.3 4.0 1.0 chr10 29508580 29508679 (106026068) + MamGypLTR1b LTR/Gypsy 273 375 (407) 2638539 268 24.7 4.9 0.0 chr10 30162895 30162975 (105371772) + MamGypLTR1c LTR/Gypsy 705 789 (14) 2639621 360 26.9 6.2 13.4 chr10 30702620 30702682 (104832065) C MamGypLTR3 LTR/Gypsy (94) 745 682 2640604 360 26.9 6.2 13.4 chr10 30702988 30703198 (104831549) C MamGypLTR3 LTR/Gypsy (158) 681 491 2640604 1091 29.1 11.2 2.5 chr10 32022150 32022566 (103512181) C MamGyp-int LTR/Gypsy (2251) 2811 2349 2642560 1091 29.1 11.2 2.5 chr10 32023297 32023360 (103511387) C MamGyp-int LTR/Gypsy (2714) 2348 2288 2642560 1040 31.9 8.7 1.6 chr10 32023389 32023872 (103510875) C MamGyp-int LTR/Gypsy (2831) 2231 1714 2642560 589 32.5 6.2 5.9 chr10 32023996 32024351 (103510396) C MamGyp-int LTR/Gypsy (3376) 1686 1330 2642560 519 37.3 8.1 1.2 chr10 32026537 32026783 (103507964) C MamGyp-int LTR/Gypsy (3743) 1319 1056 2642560 705 33.7 1.8 4.0 chr10 32034613 32034890 (103499857) C MamGyp-int LTR/Gypsy (4015) 1047 776 2642560 445 28.1 9.6 4.1 chr10 32349108 32349165 (103185582) C MamGypLTR1b LTR/Gypsy (551) 231 171 2643118 445 28.1 9.6 4.1 chr10 32349475 32349634 (103185113) C MamGypLTR1b LTR/Gypsy (612) 170 1 2643118 282 30.3 2.7 5.3 chr10 32518137 32518286 (103016461) C MamGypLTR1c LTR/Gypsy (0) 813 668 2643471 444 33.9 3.5 2.1 chr10 32519046 32519319 (103015428) C MamGypLTR1c LTR/Gypsy (173) 640 351 2643471 232 30.9 4.4 3.5 chr10 32689793 32689906 (102844841) + MamGypLTR3 LTR/Gypsy 581 695 (144) 2643779 480 32.2 17.4 5.0 chr10 33378372 33378670 (102156077) C MamGypLTR3 LTR/Gypsy (1) 838 488 2644617 480 32.2 17.4 5.0 chr10 33379046 33379261 (102155486) C MamGypLTR3 LTR/Gypsy (352) 487 259 2644617 621 29.7 14.7 2.2 chr10 33455335 33455606 (102079141) C MamGypLTR1a LTR/Gypsy (467) 317 12 2644743 554 27.7 20.4 3.8 chr10 33796108 33796499 (101738248) C MamGypLTR1c LTR/Gypsy (0) 813 344 2645199 419 27.2 12.9 5.5 chr10 33852538 33852839 (101681908) + LTR81B LTR/Gypsy 827 1375 (18) 2645265 291 26.6 4.5 6.1 chr10 34323324 34323455 (101211292) C MamGypLTR1c LTR/Gypsy (632) 171 42 2645967 268 33.9 7.1 7.7 chr10 35173711 35173892 (100360855) C MamGypLTR3 LTR/Gypsy (73) 766 586 2647248 383 27.5 8.2 2.2 chr10 35530415 35530516 (100004231) C LTR81A LTR/Gypsy (1099) 251 139 2647974 383 27.5 8.2 2.2 chr10 35530784 35530862 (100003885) C LTR81A LTR/Gypsy (1212) 138 60 2647974 312 32.9 9.5 2.9 chr10 36242967 36243207 (99291540) + LTR81B LTR/Gypsy 724 980 (413) 2649066 254 21.2 0.9 13.2 chr10 36243430 36243539 (99291208) + LTR81C LTR/Gypsy 1054 1118 (35) 2649067 252 35.9 6.5 0.7 chr10 37174553 37174706 (98360041) + MamGypLTR1d LTR/Gypsy 69 231 (582) 2650478 243 27.7 5.1 4.3 chr10 37174882 37174998 (98359749) + MamGypLTR1d LTR/Gypsy 398 515 (288) 2650478 290 32.7 6.8 10.1 chr10 37684783 37685119 (97849628) + LTR81B LTR/Gypsy 721 1046 (347) 2651187 451 26.8 23.3 0.8 chr10 38581469 38581837 (96952910) C MamGypLTR1a LTR/Gypsy (160) 624 173 2652495 448 30.5 11.9 4.8 chr10 44380077 44380346 (91154401) C MamGypLTR1b LTR/Gypsy (21) 763 476 2655662 571 26.0 1.1 6.0 chr10 44962145 44962328 (90572419) + LTR81AB LTR/Gypsy 40 214 (64) 2656257 367 22.6 5.4 14.3 chr10 44962505 44962762 (90571985) + LTR81AB LTR/Gypsy 228 462 (888) 2656257 240 29.4 19.1 3.2 chr10 44963318 44963658 (90571089) + LTR81A LTR/Gypsy 391 785 (404) 2656259 286 28.4 7.5 6.7 chr10 44963715 44963982 (90570765) + LTR81A LTR/Gypsy 1074 1343 (7) 2656259 286 29.7 5.5 0.0 chr10 45391631 45391721 (90143026) + MamGypLTR1b LTR/Gypsy 488 583 (199) 2656763 258 36.8 9.5 2.8 chr10 45502346 45502524 (90032223) + MamGypLTR1b LTR/Gypsy 499 689 (93) 2656905 236 23.9 2.9 10.7 chr10 46490563 46490665 (89044082) + MamGypLTR1c LTR/Gypsy 91 185 (618) 2658219 355 36.1 4.4 8.0 chr10 46661684 46661957 (88872790) + MamGypLTR1b LTR/Gypsy 476 739 (43) 2658445 246 12.5 0.0 0.0 chr10 47594204 47594235 (87940512) C MamGypLTR1a LTR/Gypsy (686) 98 67 2659808 235 16.7 0.0 0.0 chr10 47772146 47772181 (87762566) + MamGypLTR1a LTR/Gypsy 63 98 (686) 2660041 235 12.5 0.0 0.0 chr10 48280478 48280509 (87254238) + MamGypLTR1a LTR/Gypsy 67 98 (686) 2660568 618 29.4 9.4 8.8 chr10 48419004 48419342 (87115405) C MamGypLTR3 LTR/Gypsy (0) 839 499 2660718 232 33.8 12.0 2.7 chr10 48624059 48624283 (86910464) C MamGypLTR1c LTR/Gypsy (69) 734 489 2661003 287 23.9 1.4 0.0 chr10 48657397 48657467 (86877280) C MamGypLTR2c LTR/Gypsy (117) 951 880 2661055 258 26.4 3.2 7.5 chr10 48677915 48678008 (86856739) + MamGypLTR1c LTR/Gypsy 96 185 (618) 2661085 358 36.1 4.4 8.0 chr10 48848585 48848858 (86685889) + MamGypLTR1b LTR/Gypsy 476 739 (43) 2661306 357 35.8 4.3 8.0 chr10 49369154 49369429 (86165318) + MamGypLTR1b LTR/Gypsy 480 745 (37) 2661979 237 33.6 7.2 2.4 chr10 49757172 49757296 (85777451) C MamGypLTR1c LTR/Gypsy (14) 789 659 2662479 373 26.2 1.8 2.7 chr10 49951696 49951805 (85582942) C MamGypLTR1b LTR/Gypsy (33) 749 641 2662750 506 30.6 14.1 6.0 chr10 49951878 49952259 (85582488) C MamGypLTR1b LTR/Gypsy (324) 458 46 2662750 270 26.1 15.2 5.9 chr10 49959673 49959790 (85574957) C MamGypLTR3 LTR/Gypsy (1) 838 710 2662760 514 28.8 5.8 3.4 chr10 50103619 50103823 (85430924) C MamGypLTR2c LTR/Gypsy (30) 1038 829 2662952 345 26.2 7.8 1.6 chr10 50397403 50397530 (85137217) C MamGypLTR1d LTR/Gypsy (17) 796 661 2663316 471 24.4 6.5 5.1 chr10 50426013 50426226 (85108521) C MamGypLTR2b LTR/Gypsy (35) 887 671 2663368 739 29.4 2.9 1.9 chr10 50445754 50446079 (85088668) C LTR81A LTR/Gypsy (875) 475 142 2663390 296 31.6 7.5 3.5 chr10 50849597 50849822 (84684925) + MamGypLTR2c LTR/Gypsy 69 303 (765) 2663874 580 32.8 12.9 5.9 chr10 51524544 51524576 (84010171) C MamGypLTR1c LTR/Gypsy (187) 616 586 2664804 580 32.8 12.9 5.9 chr10 51524865 51525355 (84009392) C MamGypLTR1c LTR/Gypsy (218) 585 55 2664804 423 26.3 5.8 13.8 chr10 51525962 51526051 (84008696) C LTR81C LTR/Gypsy (56) 1097 1022 2664809 423 26.3 5.8 13.8 chr10 51526348 51526481 (84008266) C LTR81C LTR/Gypsy (132) 1021 891 2664809 312 26.3 12.8 0.0 chr10 51527693 51527825 (84006922) C LTR81C LTR/Gypsy (928) 422 273 2664809 368 28.6 21.6 1.7 chr10 52396033 52396263 (83138484) + MamGypLTR1d LTR/Gypsy 255 531 (282) 2666204 265 23.1 4.1 7.1 chr10 52410059 52410156 (83124591) + LTR81B LTR/Gypsy 416 510 (883) 2666223 258 30.3 12.4 6.9 chr10 52410651 52410852 (83123895) + LTR81B LTR/Gypsy 957 1169 (181) 2666223 237 25.6 3.4 2.3 chr10 52411423 52411510 (83123237) + LTR81B LTR/Gypsy 1261 1349 (1) 2666223 597 35.8 12.1 4.0 chr10 52553383 52554101 (82980646) C MamGypLTR1d LTR/Gypsy (1) 812 36 2666377 1203 31.2 8.1 1.8 chr10 52781753 52782281 (82752466) C MamGypLTR1a LTR/Gypsy (0) 784 212 2666743 836 27.1 10.4 7.8 chr10 53290421 53290841 (82243906) C MamGypLTR1c LTR/Gypsy (357) 446 15 2667485 361 34.1 6.6 0.9 chr10 53655366 53655593 (81879154) + MamGypLTR1b LTR/Gypsy 5 245 (539) 2668092 362 25.9 3.5 2.6 chr10 53655618 53655732 (81879015) + MamGypLTR1b LTR/Gypsy 394 509 (273) 2668092 241 16.7 7.5 1.5 chr10 53655898 53655964 (81878783) + MamGypLTR1d LTR/Gypsy 728 808 (5) 2668093 864 32.0 4.5 3.1 chr10 54157706 54158124 (81376623) C MamGypLTR1b LTR/Gypsy (0) 782 358 2668767 600 29.4 6.1 10.9 chr10 54299720 54300112 (81234635) C MamGypLTR1d LTR/Gypsy (437) 376 3 2668972 251 35.5 3.5 2.1 chr10 54410855 54410998 (81123749) + LTR81C LTR/Gypsy 429 574 (579) 2669117 349 30.3 14.6 2.4 chr10 55550940 55551152 (79983595) C LTR81A LTR/Gypsy (54) 1296 1058 2670592 305 30.4 1.9 1.9 chr10 55551816 55551919 (79982828) C LTR81A LTR/Gypsy (957) 232 129 2670592 443 29.1 3.7 11.2 chr10 55832106 55832399 (79702348) + LTR81B LTR/Gypsy 271 542 (851) 2670936 386 13.4 0.0 2.9 chr10 55832804 55832872 (79701875) + LTR81C LTR/Gypsy 1064 1130 (23) 2670937 265 32.4 4.5 3.2 chr10 56703361 56703606 (78831141) + LTR81AB LTR/Gypsy 1 249 (29) 2672114 453 33.7 15.7 2.0 chr10 56868698 56868991 (78665756) + MamGypLTR1a LTR/Gypsy 448 781 (3) 2672338 313 37.7 10.1 5.7 chr10 57102535 57102990 (78431757) + MamGypLTR1a LTR/Gypsy 255 730 (54) 2672658 355 40.8 3.6 6.1 chr10 57430239 57430713 (78104034) C MamGypLTR1c LTR/Gypsy (270) 533 71 2673143 305 20.8 3.9 1.3 chr10 57625224 57625301 (77909446) C MamGypLTR1d LTR/Gypsy (6) 807 728 2673401 267 38.1 9.0 3.1 chr10 57689745 57690101 (77844646) + MamGypLTR1c LTR/Gypsy 26 403 (400) 2673476 250 18.2 16.4 4.8 chr10 58457805 58457908 (77076839) + MamGypLTR2b LTR/Gypsy 781 896 (26) 2674476 361 30.1 5.7 5.7 chr10 59436286 59436479 (76098268) + LTR81B LTR/Gypsy 10 203 (1147) 2675815 653 38.3 6.4 0.3 chr10 59436715 59437026 (76097721) + LTR81B LTR/Gypsy 538 868 (525) 2675815 400 34.0 2.4 5.2 chr10 59515750 59515960 (76018787) + MamGypLTR2b LTR/Gypsy 1 205 (717) 2675920 377 31.5 13.1 3.1 chr10 60932455 60932805 (74601942) C LTR81B LTR/Gypsy (0) 1393 1008 2677898 818 29.5 10.3 4.7 chr10 60933826 60934359 (74600388) C LTR81B LTR/Gypsy (734) 616 73 2677898 301 24.4 1.1 4.3 chr10 61274955 61275048 (74259699) + MamGypLTR1b LTR/Gypsy 139 229 (553) 2678360 251 31.3 17.2 0.7 chr10 61275240 61275394 (74259353) + MamGypLTR1b LTR/Gypsy 630 805 (8) 2678360 295 21.6 16.7 0.0 chr10 61724658 61724710 (73810037) C LTR81B LTR/Gypsy (2) 1391 1333 2679066 295 21.6 16.7 0.0 chr10 61725020 61725067 (73809680) C LTR81B LTR/Gypsy (61) 1332 1274 2679066 599 31.0 5.1 7.2 chr10 61725281 61725614 (73809133) C LTR81C LTR/Gypsy (365) 788 462 2679068 409 20.4 1.1 15.1 chr10 62600476 62600585 (72934162) C MamGypLTR1a LTR/Gypsy (625) 159 62 2680365 409 20.4 1.1 15.1 chr10 62601214 62601277 (72933470) C MamGypLTR1a LTR/Gypsy (728) 56 1 2680365 231 29.2 1.4 1.4 chr10 62854902 62854974 (72679773) + MamGypLTR1b LTR/Gypsy 437 509 (273) 2680725 283 29.0 4.4 6.1 chr10 62891197 62891310 (72643437) C MamGypLTR1b LTR/Gypsy (42) 740 629 2680773 440 29.5 9.5 6.1 chr10 62905031 62905261 (72629486) C MamGypLTR1a LTR/Gypsy (519) 265 27 2680797 419 31.0 3.9 0.6 chr10 62929660 62929815 (72604932) + MamGypLTR1a LTR/Gypsy 1 161 (623) 2680833 304 27.6 10.2 3.2 chr10 63118051 63118207 (72416540) C LTR81C LTR/Gypsy (24) 1129 962 2681104 232 25.8 4.8 1.6 chr10 63121507 63121569 (72413178) C LTR81C LTR/Gypsy (1022) 131 67 2681104 281 14.6 1.8 3.5 chr10 63352510 63352566 (72182181) + MamGypLTR3 LTR/Gypsy 549 604 (235) 2681413 273 32.6 1.1 0.0 chr10 63905754 63905842 (71628905) C MamGypLTR3 LTR/Gypsy (347) 492 403 2682245 304 28.9 15.5 5.4 chr10 64073451 64073618 (71461129) + LTR81C LTR/Gypsy 807 991 (162) 2682513 256 13.5 1.9 1.9 chr10 64074874 64074926 (71459821) + LTR81C LTR/Gypsy 1104 1156 (33) 2682513 568 32.1 9.7 1.9 chr10 64076825 64077091 (71457656) + MamGypLTR2b LTR/Gypsy 75 362 (560) 2682522 1125 29.8 5.2 4.5 chr10 64222078 64222593 (71312154) + MamGypLTR1a LTR/Gypsy 258 777 (7) 2682743 699 24.7 12.5 3.5 chr10 64509125 64509413 (71025334) C MamGypLTR2c LTR/Gypsy (0) 1068 754 2683164 231 31.0 13.0 3.9 chr10 64510002 64510209 (71024538) C MamGypLTR2c LTR/Gypsy (789) 279 53 2683164 692 35.3 8.3 5.0 chr10 65401592 65401891 (70132856) C LTR81C LTR/Gypsy (520) 830 316 2684709 692 35.3 7.0 3.3 chr10 65402304 65402554 (70132193) C LTR81C LTR/Gypsy (838) 315 64 2684709 426 29.1 7.0 9.6 chr10 65478419 65478730 (70056017) C MamGypLTR2b LTR/Gypsy (572) 350 47 2684859 287 29.5 14.9 6.5 chr10 65794268 65794769 (69739978) + MamGypLTR2c LTR/Gypsy 344 1052 (16) 2685328 2129 30.6 10.0 4.2 chr10 65889459 65890516 (69644231) + LTR81C LTR/Gypsy 15 1133 (20) 2685455 269 26.3 21.2 0.0 chr10 66154201 66154299 (69380448) + MamGypLTR2b LTR/Gypsy 680 799 (123) 2685835 260 40.1 5.5 4.5 chr10 66161938 66162229 (69372518) C MamGypLTR2b LTR/Gypsy (508) 414 120 2685848 284 20.0 0.0 3.2 chr10 66314855 66314916 (69219831) C LTR81 LTR/Gypsy (0) 1189 1130 2686065 390 39.3 4.1 4.7 chr10 66315319 66315681 (69219066) C MamGypLTR1b LTR/Gypsy (196) 586 226 2686066 246 28.6 8.7 6.0 chr10 66354029 66354177 (69180570) C MamGypLTR3 LTR/Gypsy (25) 814 662 2686123 573 30.9 4.0 8.4 chr10 66446598 66446800 (69087947) + MamGypLTR1c LTR/Gypsy 6 208 (595) 2686261 573 35.5 13.4 4.9 chr10 66447160 66447696 (69087051) + MamGypLTR1c LTR/Gypsy 209 794 (9) 2686261 350 25.0 7.9 4.9 chr10 66663223 66663386 (68871361) + LTR81 LTR/Gypsy 978 1146 (43) 2686551 328 32.9 1.9 1.3 chr10 67099409 67099562 (68435185) C MamGypLTR1a LTR/Gypsy (3) 779 625 2687146 344 35.1 4.7 1.0 chr10 67099809 67100001 (68434746) C MamGypLTR1a LTR/Gypsy (502) 282 83 2687146 480 27.4 5.2 12.8 chr10 67868886 67869074 (67665673) + MamGypLTR1a LTR/Gypsy 430 619 (184) 2688210 407 26.7 5.0 14.3 chr10 67869299 67869386 (67665361) + MamGypLTR1a LTR/Gypsy 620 695 (108) 2688210 359 29.2 6.7 12.1 chr10 68082601 68082989 (67451758) C MamGypLTR1b LTR/Gypsy (414) 368 1 2688517 239 28.9 6.5 3.7 chr10 68149987 68150094 (67384653) + MamGypLTR2c LTR/Gypsy 4 114 (954) 2688615 387 28.1 12.3 1.5 chr10 68150153 68150347 (67384400) + MamGypLTR2c LTR/Gypsy 837 1052 (16) 2688615 284 28.1 0.9 6.4 chr10 68220481 68220590 (67314157) C MamGypLTR2c LTR/Gypsy (887) 181 78 2688699 234 31.5 5.5 2.2 chr10 69255313 69255403 (66279344) C MamGypLTR2b LTR/Gypsy (828) 94 1 2690106 533 23.1 0.7 2.9 chr10 69378804 69378941 (66155806) + LTR81B LTR/Gypsy 74 208 (70) 2690250 346 20.2 8.2 1.2 chr10 69379286 69379370 (66155377) + LTR81B LTR/Gypsy 227 317 (1033) 2690250 620 25.2 23.3 2.0 chr10 69380018 69380397 (66154350) + LTR81B LTR/Gypsy 893 1350 (0) 2690250 285 26.6 18.6 4.2 chr10 69436205 69436322 (66098425) C MamGypLTR3 LTR/Gypsy (31) 808 674 2690312 363 18.1 0.0 1.4 chr10 69906204 69906276 (65628471) C MamGypLTR1a LTR/Gypsy (6) 778 707 2691169 628 26.3 19.0 9.9 chr10 69907283 69907809 (65626938) C MamGypLTR1a LTR/Gypsy (205) 579 5 2691169 386 32.2 5.6 5.2 chr10 71178347 71178559 (64356188) + LTR81AB LTR/Gypsy 1 214 (64) 2694079 823 31.1 10.3 2.6 chr10 71182373 71182838 (64351909) C MamGypLTR1a LTR/Gypsy (0) 784 283 2694088 253 35.2 3.2 3.2 chr10 71386784 71386877 (64147870) C MamGypLTR1d LTR/Gypsy (223) 590 497 2694465 253 35.2 3.2 3.2 chr10 71386930 71386960 (64147787) C MamGypLTR1d LTR/Gypsy (317) 496 466 2694465 393 24.6 7.3 1.5 chr10 71387194 71387329 (64147418) C MamGypLTR1c LTR/Gypsy (645) 158 15 2694467 370 33.2 7.1 12.3 chr10 71426123 71426644 (64108103) + MamGypLTR1c LTR/Gypsy 10 504 (309) 2694533 443 31.5 7.8 8.1 chr10 71426657 71426977 (64107770) + MamGypLTR1c LTR/Gypsy 471 790 (13) 2694533 228 26.1 4.3 3.5 chr10 71449470 71449584 (64085163) + MamGypLTR2b LTR/Gypsy 778 893 (29) 2694572 313 24.6 4.9 9.1 chr10 71542536 71542678 (63992069) + MamGypLTR1c LTR/Gypsy 8 144 (659) 2694745 316 30.8 6.9 2.9 chr10 71542894 71543067 (63991680) + MamGypLTR1c LTR/Gypsy 314 494 (309) 2694745 295 33.5 9.1 3.5 chr10 71620110 71620363 (63914384) C MamGypLTR2c LTR/Gypsy (3) 1065 798 2694880 267 29.6 8.4 9.0 chr10 71757424 71757590 (63777157) C MamGypLTR3 LTR/Gypsy (15) 824 659 2695042 309 25.7 0.0 0.0 chr10 72773226 72773299 (62761448) + MamGypLTR2b LTR/Gypsy 807 880 (42) 2696947 345 30.4 11.2 3.5 chr10 73110157 73110422 (62424325) C LTR81B LTR/Gypsy (76) 1317 823 2697471 443 29.7 16.9 8.8 chr10 76324454 76324737 (59210010) C MamGypLTR1b LTR/Gypsy (35) 747 441 2703571 282 26.8 9.9 3.0 chr10 76842262 76842392 (58692355) C LTR81A LTR/Gypsy (30) 1320 1181 2704516 373 27.4 1.0 1.9 chr10 77106942 77107045 (58427702) + MamGypLTR3 LTR/Gypsy 737 839 (0) 2705051 226 29.3 17.2 5.7 chr10 77269901 77270179 (58264568) + MamGypLTR1d LTR/Gypsy 54 364 (449) 2705306 278 29.0 12.2 5.7 chr10 78590146 78590390 (56944357) + MamGypLTR1a LTR/Gypsy 498 758 (26) 2707030 239 27.8 8.3 0.9 chr10 79437567 79437675 (56097072) C MamGypLTR1b LTR/Gypsy (40) 742 626 2708315 560 30.0 10.8 2.2 chr10 79479328 79479596 (56055151) C MamGypLTR3 LTR/Gypsy (68) 771 480 2708401 293 31.4 5.0 10.3 chr10 79533734 79534053 (56000694) C MamGypLTR3 LTR/Gypsy (54) 785 483 2708495 1187 29.8 19.1 1.9 chr10 79870447 79871134 (55663613) C LTR81B LTR/Gypsy (193) 1200 383 2709085 245 28.8 13.4 2.5 chr10 79951641 79951797 (55582950) + MamGypLTR1a LTR/Gypsy 96 269 (513) 2709246 571 34.0 5.5 2.9 chr10 79951902 79952249 (55582498) + MamGypLTR1a LTR/Gypsy 421 777 (7) 2709246 228 25.7 3.9 12.3 chr10 80033215 80033369 (55501378) + LTR81C LTR/Gypsy 981 1122 (31) 2709395 476 31.5 8.6 6.3 chr10 80129341 80129736 (55405011) C MamGypLTR1d LTR/Gypsy (273) 540 136 2709563 668 24.8 1.6 4.1 chr10 80171744 80171987 (55362760) + MamGypLTR2b LTR/Gypsy 678 915 (7) 2709639 326 26.4 3.2 2.0 chr10 80212355 80212462 (55322285) C MamGypLTR1c LTR/Gypsy (3) 781 673 2709716 228 29.0 2.9 0.0 chr10 80291873 80291941 (55242806) C MamGypLTR1a LTR/Gypsy (192) 592 522 2709853 398 18.4 5.6 2.2 chr10 81315509 81315597 (54219150) + MamGypLTR1b LTR/Gypsy 652 743 (39) 2711620 438 18.2 3.3 2.2 chr10 81353600 81353689 (54181058) + MamGypLTR1b LTR/Gypsy 653 743 (39) 2711659 492 17.6 1.1 0.0 chr10 81375222 81375312 (54159435) C MamGypLTR1a LTR/Gypsy (39) 745 654 2711681 328 28.4 6.3 5.1 chr10 82384093 82384329 (53150418) C LTR81A LTR/Gypsy (918) 432 193 2713235 298 28.8 19.4 1.4 chr10 82461744 82461965 (53072782) + MamGypLTR1d LTR/Gypsy 57 318 (495) 2713350 426 33.7 8.3 3.2 chr10 82553411 82553748 (52980999) + MamGypLTR1c LTR/Gypsy 432 786 (17) 2713465 330 33.8 6.1 0.0 chr10 82658544 82658691 (52876056) C MamGyp-int LTR/Gypsy (1656) 3406 3250 2713567 701 32.8 6.5 3.8 chr10 82659182 82659652 (52875095) C MamGyp-int LTR/Gypsy (2467) 2595 2102 2713567 701 32.8 6.5 3.8 chr10 82659873 82659926 (52874821) C MamGyp-int LTR/Gypsy (2961) 2101 2056 2713567 987 35.5 9.7 7.7 chr10 82674416 82674778 (52859969) C LTR81 LTR/Gypsy (7) 1182 810 2713598 987 35.5 9.7 7.7 chr10 82675083 82675557 (52859190) C LTR81 LTR/Gypsy (380) 809 308 2713598 987 35.5 9.7 7.7 chr10 82675928 82676225 (52858522) C LTR81 LTR/Gypsy (882) 307 23 2713598 416 28.9 9.4 5.8 chr10 82701730 82702089 (52832658) C LTR81B LTR/Gypsy (7) 1343 900 2713632 561 29.6 5.2 3.6 chr10 82702555 82702859 (52831888) C LTR81B LTR/Gypsy (994) 399 90 2713632 646 32.7 11.9 1.8 chr10 82801433 82801818 (52732929) + MamGypLTR1a LTR/Gypsy 163 587 (197) 2713767 252 21.4 6.2 8.6 chr10 83404903 83405030 (52129717) + MamGypLTR2b LTR/Gypsy 773 897 (25) 2714565 296 33.7 0.0 0.0 chr10 84275491 84275573 (51259174) C LTR81B LTR/Gypsy (704) 689 607 2715733 546 27.9 3.2 0.0 chr10 84336147 84336300 (51198447) C MamGypLTR1a LTR/Gypsy (558) 226 68 2715824 260 27.5 2.5 0.0 chr10 84899308 84899387 (50635360) + MamGypLTR1a LTR/Gypsy 115 196 (588) 2716620 232 39.6 9.7 1.9 chr10 84899419 84899789 (50634958) + MamGypLTR1a LTR/Gypsy 255 654 (130) 2716620 246 31.2 3.8 0.0 chr10 85460377 85460456 (50074291) C LTR81A LTR/Gypsy (222) 1128 1046 2717364 235 28.7 10.1 6.2 chr10 85574508 85574701 (49960046) C MamGypLTR1b LTR/Gypsy (185) 599 379 2717489 231 20.0 1.8 1.8 chr10 85753378 85753433 (49781314) C MamGypLTR1d LTR/Gypsy (13) 800 745 2717745 1134 28.7 11.2 6.5 chr10 85776067 85776609 (49758138) + MamGypLTR1c LTR/Gypsy 2 570 (233) 2717781 457 19.8 1.0 1.9 chr10 85776648 85776750 (49757997) + MamGypLTR1c LTR/Gypsy 701 802 (1) 2717781 344 33.5 12.5 5.1 chr10 86465625 86466137 (49068610) + MamGypLTR1a LTR/Gypsy 117 667 (117) 2718811 315 23.7 12.2 1.0 chr10 86471978 86472075 (49062672) + MamGypLTR1a LTR/Gypsy 653 761 (21) 2718811 228 23.4 10.1 5.0 chr10 86852644 86852742 (48682005) C MamGypLTR1c LTR/Gypsy (684) 119 16 2719259 290 34.6 0.7 2.2 chr10 87138370 87138508 (48396239) + LTR81C LTR/Gypsy 819 955 (198) 2719599 340 28.1 8.8 3.2 chr10 87659238 87659362 (47875385) + MamGypLTR1a LTR/Gypsy 594 725 (59) 2720195 635 26.7 5.8 4.6 chr10 87701467 87701725 (47833022) C MamGypLTR2b LTR/Gypsy (6) 916 655 2720245 293 32.8 2.6 2.1 chr10 87706856 87707016 (47827731) + MamGypLTR2b LTR/Gypsy 640 922 (0) 2720252 335 29.8 11.7 5.2 chr10 88465190 88465419 (47069328) C MamGypLTR1c LTR/Gypsy (24) 779 535 2721434 227 32.1 0.0 0.0 chr10 88867541 88867610 (46667137) C MamGypLTR2c LTR/Gypsy (0) 922 853 2722184 227 32.1 0.0 0.0 chr10 88868362 88868374 (46666373) C MamGypLTR2c LTR/Gypsy (70) 852 840 2722184 237 34.7 7.2 3.2 chr10 88868926 88869050 (46665697) C MamGypLTR2c LTR/Gypsy (660) 408 279 2722184 234 31.7 3.9 7.8 chr10 88869455 88869608 (46665139) C MamGypLTR2c LTR/Gypsy (900) 168 21 2722184 288 22.4 4.0 0.0 chr10 89788759 89788834 (45745913) C MamGypLTR1b LTR/Gypsy (0) 782 704 2723632 625 31.9 5.1 6.4 chr10 89958681 89959072 (45575675) + LTR81C LTR/Gypsy 1 387 (766) 2723937 386 23.0 5.8 15.1 chr10 89959447 89959611 (45575136) + LTR81C LTR/Gypsy 1066 1227 (123) 2723939 409 23.0 5.8 15.1 chr10 89959891 89960016 (45574731) + LTR81C LTR/Gypsy 1024 1133 (20) 2723939 388 26.1 1.1 2.1 chr10 90210148 90210241 (45324506) + MamGypLTR2c LTR/Gypsy 438 530 (538) 2724261 378 32.6 10.1 1.4 chr10 90210403 90210620 (45324127) + MamGypLTR2c LTR/Gypsy 816 1052 (16) 2724261 323 31.3 13.5 5.2 chr10 90367166 90367357 (45167390) + MamGypLTR2c LTR/Gypsy 299 506 (562) 2724509 455 27.8 1.2 3.1 chr10 91040599 91040761 (44493986) C LTR81A LTR/Gypsy (1172) 178 19 2725560 337 27.4 16.0 4.6 chr10 91444056 91444292 (44090455) + MamGypLTR1a LTR/Gypsy 1 264 (520) 2726212 452 32.0 4.7 1.7 chr10 91444512 91444743 (44090004) + MamGypLTR1a LTR/Gypsy 522 760 (24) 2726212 560 33.3 9.1 1.6 chr10 91686755 91687074 (43847673) + MamGypLTR3 LTR/Gypsy 168 511 (328) 2726586 343 22.8 0.0 1.2 chr10 91688085 91688164 (43846583) + MamGypLTR3 LTR/Gypsy 756 834 (5) 2726589 247 34.2 2.9 9.2 chr10 91979673 91979846 (43554901) C MamGypLTR3 LTR/Gypsy (129) 710 548 2726951 466 34.8 6.2 1.4 chr10 91979873 91980163 (43554584) C MamGypLTR3 LTR/Gypsy (361) 478 174 2726951 298 31.9 11.9 5.8 chr10 92164919 92165211 (43369536) C MamGypLTR1d LTR/Gypsy (502) 311 1 2727195 408 29.2 9.8 5.3 chr10 92778663 92778908 (42755839) + MamGypLTR1a LTR/Gypsy 152 408 (376) 2728044 626 22.5 1.4 0.7 chr10 92780059 92780201 (42754546) + MamGypLTR1a LTR/Gypsy 641 784 (0) 2728044 417 25.5 16.1 1.8 chr10 92807402 92807625 (42727122) + MamGypLTR2b LTR/Gypsy 664 919 (3) 2728081 714 32.9 19.2 1.4 chr10 92835193 92835759 (42698988) + MamGypLTR1a LTR/Gypsy 95 762 (22) 2728125 229 29.5 1.3 1.3 chr10 92887058 92887136 (42647611) C MamGypLTR1b LTR/Gypsy (37) 745 667 2728196 333 26.4 0.8 6.0 chr10 92890768 92890900 (42643847) C MamGypLTR1a LTR/Gypsy (577) 207 82 2728204 258 21.1 7.5 9.2 chr10 93323046 93323165 (42211582) C MamGypLTR3 LTR/Gypsy (224) 615 498 2728823 242 32.7 5.6 7.4 chr10 93354544 93354705 (42180042) + MamGypLTR1a LTR/Gypsy 599 757 (27) 2728894 346 24.1 7.3 0.9 chr10 94874164 94874272 (40660475) + MamGypLTR1c LTR/Gypsy 16 131 (672) 2731756 228 36.1 5.9 4.2 chr10 94874475 94874711 (40660036) + MamGypLTR1c LTR/Gypsy 418 658 (145) 2731757 557 24.1 9.3 13.0 chr10 95601155 95601369 (39933378) C MamGypLTR3 LTR/Gypsy (0) 839 633 2733110 706 32.6 6.2 3.5 chr10 95602220 95602558 (39932189) C MamGypLTR3 LTR/Gypsy (217) 622 275 2733110 407 31.5 12.7 3.9 chr10 95630209 95630413 (39904334) + MamGypLTR2b LTR/Gypsy 9 231 (691) 2733168 381 23.6 8.7 7.3 chr10 95631856 95632074 (39902673) + MamGypLTR1c LTR/Gypsy 592 799 (14) 2733171 618 22.6 16.0 7.0 chr10 95760575 95760936 (39773811) C MamGypLTR1c LTR/Gypsy (400) 413 29 2733391 296 28.8 7.8 1.4 chr10 97071075 97071215 (38463532) + MamGypLTR1b LTR/Gypsy 633 782 (0) 2735276 500 32.2 13.0 5.2 chr10 97493595 97494139 (38040608) + MamGypLTR1b LTR/Gypsy 182 768 (14) 2735979 318 24.3 7.8 8.7 chr10 97750333 97750501 (37784246) + MamGypLTR1a LTR/Gypsy 1 172 (610) 2736375 371 27.4 6.6 4.1 chr10 97750642 97750763 (37783984) + MamGypLTR1a LTR/Gypsy 659 783 (1) 2736375 576 28.8 12.5 4.0 chr10 98053579 98053875 (37480872) C LTR81B LTR/Gypsy (5) 1388 1067 2736850 363 27.4 8.0 1.5 chr10 98531567 98531703 (37003044) C MamGypLTR1b LTR/Gypsy (16) 766 621 2737715 431 29.7 17.6 4.1 chr10 98923918 98924286 (36610461) + MamGypLTR1b LTR/Gypsy 1 419 (384) 2738439 240 27.9 17.9 0.9 chr10 99565744 99565855 (35968892) C MamGypLTR3 LTR/Gypsy (37) 802 672 2739804 251 30.8 8.9 2.9 chr10 100347722 100348016 (35186731) + LTR81C LTR/Gypsy 42 356 (994) 2741106 357 36.5 4.2 4.0 chr10 100348225 100348695 (35186052) + LTR81C LTR/Gypsy 485 956 (197) 2741106 897 25.9 16.1 2.3 chr10 100455369 100455752 (35078995) C MamGypLTR1d LTR/Gypsy (369) 444 8 2741278 307 32.2 6.0 1.3 chr10 101748159 101748309 (33786438) + MamGypLTR1a LTR/Gypsy 627 784 (0) 2743346 226 31.9 9.7 0.0 chr10 103541392 103541463 (31993284) C LTR81C LTR/Gypsy (876) 277 199 2746419 253 23.5 16.5 1.6 chr10 103930353 103930473 (31604274) C MamGypLTR1b LTR/Gypsy (479) 303 165 2747120 435 25.2 6.6 17.3 chr10 105009975 105010037 (30524710) C MamGypLTR3 LTR/Gypsy (15) 824 779 2749148 435 25.2 6.6 17.3 chr10 105010203 105010502 (30524245) C MamGypLTR3 LTR/Gypsy (61) 778 500 2749148 612 31.4 7.8 4.9 chr10 105632617 105632674 (29902073) C MamGypLTR1b LTR/Gypsy (0) 782 728 2750364 612 30.4 8.3 5.3 chr10 105632980 105633437 (29901310) C MamGypLTR1b LTR/Gypsy (55) 727 167 2750364 391 19.3 16.5 2.9 chr10 105633737 105633880 (29900867) C MamGypLTR1b LTR/Gypsy (637) 166 2 2750364 225 24.8 8.8 11.3 chr10 106699513 106699671 (28835076) C MamGypLTR1b LTR/Gypsy (6) 776 622 2752008 283 29.2 3.3 0.8 chr10 107638758 107638878 (27895869) + MamGypLTR2b LTR/Gypsy 695 818 (104) 2753385 648 35.2 12.4 3.2 chr10 107815063 107815531 (27719216) C LTR81C LTR/Gypsy (139) 1014 503 2753594 265 35.4 16.3 3.1 chr10 107869476 107869831 (27664916) C MamGypLTR1d LTR/Gypsy (307) 506 104 2753670 632 33.3 5.0 6.9 chr10 107996125 107996338 (27538409) + MamGypLTR1a LTR/Gypsy 18 226 (558) 2753854 632 33.4 4.8 6.8 chr10 107996693 107997031 (27537716) + MamGypLTR1a LTR/Gypsy 227 565 (217) 2753854 287 31.6 1.7 0.8 chr10 108044289 108044406 (27490341) C MamGypLTR1d LTR/Gypsy (10) 793 675 2753915 373 28.5 0.8 7.5 chr10 108044590 108044722 (27490025) C MamGypLTR1d LTR/Gypsy (301) 512 389 2753915 390 26.9 5.8 0.0 chr10 108186016 108186119 (27348628) C LTR81AB LTR/Gypsy (162) 116 7 2754131 262 30.6 7.9 2.1 chr10 108827970 108828159 (26706588) C MamGypLTR1d LTR/Gypsy (612) 201 1 2755153 477 30.9 5.6 7.6 chr10 108855062 108855418 (26679329) + MamGypLTR2c LTR/Gypsy 690 1039 (29) 2755191 276 32.7 4.8 3.9 chr10 110093140 110093346 (25441401) + MamGypLTR2c LTR/Gypsy 19 227 (841) 2756827 266 32.8 9.7 2.4 chr10 111231824 111232070 (24302677) + MamGypLTR1b LTR/Gypsy 512 776 (6) 2758371 1481 31.6 7.9 7.9 chr10 111869846 111870473 (23664274) C MamGypLTR3 LTR/Gypsy (2) 837 218 2759247 1481 31.6 7.9 7.9 chr10 111870741 111870945 (23663802) C MamGypLTR3 LTR/Gypsy (622) 217 4 2759247 243 25.7 2.9 0.0 chr10 112137538 112137607 (23397140) + MamGypLTR1d LTR/Gypsy 351 422 (391) 2759669 230 27.6 3.5 0.0 chr10 112137774 112137860 (23396887) + MamGypLTR1d LTR/Gypsy 667 756 (57) 2759669 413 28.9 12.7 3.8 chr10 113072648 113072884 (22461863) + MamGypLTR3 LTR/Gypsy 363 620 (219) 2761186 255 24.7 9.3 1.2 chr10 113076213 113076298 (22458449) + MamGypLTR3 LTR/Gypsy 736 828 (11) 2761186 404 32.8 8.7 3.3 chr10 113080293 113080825 (22453922) C MamGypLTR1b LTR/Gypsy (207) 575 8 2761196 254 28.6 7.2 3.9 chr10 113693826 113694032 (21840715) C MamGypLTR1b LTR/Gypsy (517) 265 52 2762102 955 25.7 4.4 4.4 chr10 113782548 113782885 (21751862) + LTR81B LTR/Gypsy 13 350 (1043) 2762261 310 26.5 12.4 4.4 chr10 113783875 113784049 (21750698) + LTR81B LTR/Gypsy 1073 1186 (207) 2762261 343 28.6 12.8 1.1 chr10 113784778 113784964 (21749783) + LTR81B LTR/Gypsy 1185 1393 (0) 2762261 259 22.4 0.0 6.6 chr10 115075064 115075154 (20459593) + MamGypLTR1d LTR/Gypsy 728 812 (1) 2764287 297 22.8 12.2 5.6 chr10 115263676 115263782 (20270965) C MamGypLTR3 LTR/Gypsy (32) 807 694 2764581 537 25.5 8.4 1.2 chr10 115298031 115298197 (20236550) C MamGypLTR3 LTR/Gypsy (41) 798 620 2764645 247 18.9 30.9 6.6 chr10 115424311 115424446 (20110301) + MamGypLTR1b LTR/Gypsy 30 198 (584) 2764849 276 31.1 9.8 1.3 chr10 115425392 115425544 (20109203) + MamGypLTR1b LTR/Gypsy 555 720 (62) 2764852 314 32.3 2.2 8.1 chr10 116022260 116022518 (19512229) C LTR81A LTR/Gypsy (445) 905 464 2765735 324 30.1 6.4 8.6 chr10 116696488 116696847 (18837900) C MamGypLTR1a LTR/Gypsy (22) 760 409 2766853 340 23.6 0.0 4.3 chr10 116696925 116697017 (18837730) C MamGypLTR1a LTR/Gypsy (587) 197 109 2766853 488 25.8 15.9 8.4 chr10 116773198 116773460 (18761287) C MamGypLTR3 LTR/Gypsy (11) 828 536 2766986 488 25.8 15.9 8.4 chr10 116773815 116773859 (18760888) C MamGypLTR3 LTR/Gypsy (304) 535 497 2766986 371 34.6 9.7 0.9 chr10 116796304 116796519 (18738228) + MamGypLTR3 LTR/Gypsy 285 519 (320) 2767029 279 20.1 12.3 7.1 chr10 117721870 117722024 (17812723) + MamGypLTR2b LTR/Gypsy 746 908 (14) 2768198 366 29.8 7.4 6.2 chr10 117880398 117880640 (17654107) + MamGypLTR3 LTR/Gypsy 559 804 (35) 2768392 268 21.9 11.2 8.8 chr10 118316770 118316894 (17217853) C LTR81B LTR/Gypsy (153) 1240 1113 2769013 287 22.2 16.4 1.8 chr10 118317376 118317485 (17217262) C LTR81B LTR/Gypsy (1031) 362 237 2769013 295 20.8 0.0 1.3 chr10 118317614 118317691 (17217056) C LTR81B LTR/Gypsy (1173) 220 144 2769013 591 29.0 4.4 7.1 chr10 118535812 118536258 (16998489) C LTR81A LTR/Gypsy (905) 445 1 2769371 987 27.0 14.8 5.2 chr10 119627312 119627730 (15907017) + MamGypLTR1d LTR/Gypsy 352 810 (3) 2771177 339 24.0 17.5 4.2 chr10 119814964 119815180 (15719567) + MamGypLTR2b LTR/Gypsy 677 922 (0) 2771448 677 30.6 22.0 9.3 chr10 120662488 120663175 (14871572) + MamGypLTR1a LTR/Gypsy 2 776 (6) 2772714 345 23.8 7.0 5.4 chr10 120663708 120663836 (14870911) C MamGypLTR1b LTR/Gypsy (651) 131 1 2772716 229 26.7 3.3 5.5 chr10 121068517 121068607 (14466140) C MamGypLTR1a LTR/Gypsy (339) 445 357 2773569 272 19.2 7.3 4.9 chr10 121721011 121721092 (13813655) + MamGypLTR1c LTR/Gypsy 683 766 (37) 2774783 340 27.3 6.0 1.5 chr10 121734577 121734710 (13800037) C MamGypLTR2b LTR/Gypsy (24) 898 759 2774805 387 22.0 16.8 0.8 chr10 122136939 122137057 (13397690) C MamGypLTR1d LTR/Gypsy (16) 768 631 2775396 579 21.2 14.7 1.1 chr10 122137675 122137865 (13396882) C MamGypLTR1d LTR/Gypsy (582) 231 15 2775396 522 24.5 4.7 5.2 chr10 122582252 122582423 (12952324) + MamGypLTR1a LTR/Gypsy 613 783 (1) 2776057 246 21.7 0.0 0.0 chr10 122947242 122947287 (12587460) + MamGypLTR1d LTR/Gypsy 489 534 (279) 2776555 495 22.7 6.2 6.0 chr10 123813258 123813481 (11721266) C MamGypLTR1a LTR/Gypsy (512) 270 45 2777974 574 26.9 23.8 4.1 chr10 123813579 123814070 (11720677) C MamGypLTR3 LTR/Gypsy (85) 754 166 2777976 281 30.8 3.6 2.7 chr10 124478943 124479052 (11055695) + MamGypLTR2b LTR/Gypsy 493 603 (319) 2778975 310 32.2 15.1 0.8 chr10 124515407 124515813 (11018934) C MamGypLTR1c LTR/Gypsy (293) 489 30 2779023 240 21.7 13.5 9.8 chr10 124549808 124549940 (10984807) C LTR81B LTR/Gypsy (1248) 145 8 2779073 378 32.7 8.0 6.5 chr10 124826139 124826615 (10708132) + MamGypLTR1a LTR/Gypsy 152 635 (149) 2779437 269 33.3 3.5 5.3 chr10 125151831 125152001 (10382746) + MamGypLTR2b LTR/Gypsy 162 329 (593) 2779911 355 23.2 16.6 4.2 chr10 125196010 125196233 (10338514) C LTR81A LTR/Gypsy (1140) 253 9 2779987 316 18.1 2.7 1.4 chr10 125462538 125462610 (10072137) C MamGypLTR1a LTR/Gypsy (637) 147 74 2780427 247 31.7 9.0 3.5 chr10 125692648 125692791 (9841956) + MamGypLTR3 LTR/Gypsy 480 631 (208) 2780764 349 25.4 6.1 0.8 chr10 125728075 125728205 (9806542) C MamGypLTR2b LTR/Gypsy (0) 922 785 2780816 439 32.6 6.8 10.1 chr10 125992608 125993092 (9541655) C MamGypLTR1b LTR/Gypsy (28) 754 286 2781124 462 22.1 12.4 0.7 chr10 126623896 126624032 (8910715) C MamGypLTR1a LTR/Gypsy (0) 784 632 2782226 368 35.0 8.2 1.7 chr10 126968591 126968881 (8565866) + MamGypLTR1b LTR/Gypsy 473 782 (0) 2782661 284 24.0 10.8 3.3 chr10 127045657 127045783 (8488964) C MamGypLTR2c LTR/Gypsy (14) 1054 819 2782787 481 27.2 11.4 1.7 chr10 128106992 128107197 (7427550) + LTR81A LTR/Gypsy 133 358 (992) 2784148 350 23.9 2.2 2.2 chr10 128412662 128412751 (7121996) C MamGypLTR2b LTR/Gypsy (5) 917 828 2784537 314 32.7 9.4 3.8 chr10 128412785 128412997 (7121750) C MamGypLTR2b LTR/Gypsy (172) 750 526 2784537 261 26.9 4.8 0.9 chr10 128581691 128581795 (6952952) C MamGypLTR1a LTR/Gypsy (601) 183 75 2784786 539 31.5 10.1 2.2 chr10 129321094 129321369 (6213378) C MamGypLTR2c LTR/Gypsy (765) 303 6 2785491 257 26.2 13.1 5.1 chr10 129332559 129332695 (6202052) + LTR81 LTR/Gypsy 100 250 (903) 2785504 474 34.8 10.6 2.3 chr10 130055301 130055650 (5479097) + MamGypLTR1b LTR/Gypsy 345 723 (59) 2786419 657 28.7 13.4 6.0 chr10 130423314 130424067 (5110680) + LTR81A LTR/Gypsy 2 839 (554) 2786806 365 30.3 5.4 4.2 chr10 130633702 130633968 (4900779) C MamGypLTR1b LTR/Gypsy (273) 509 236 2787048 500 26.7 10.8 4.0 chr10 131807093 131807369 (3727378) + LTR81B LTR/Gypsy 1 296 (1097) 2788114 242 34.4 3.0 3.5 chr10 132233018 132233186 (3301561) + MamGypLTR1c LTR/Gypsy 399 566 (237) 2788654 231 31.6 8.6 2.9 chr10 133029888 133030027 (2504720) + LTR81A LTR/Gypsy 36 183 (1167) 2789457 250 20.6 1.3 4.0 chr10 133249864 133249939 (2284808) C LTR81B LTR/Gypsy (248) 905 832 2789696 440 24.6 0.7 2.1 chr10 133250468 133250608 (2284139) C LTR81B LTR/Gypsy (1149) 244 106 2789696 397 21.4 1.2 0.0 chr11 1692906 1692989 (133313527) + LTR81B LTR/Gypsy 146 230 (1163) 2793887 442 26.0 7.9 2.8 chr11 3567865 3568042 (131438474) C MamGypLTR1b LTR/Gypsy (3) 779 593 2796017 713 31.2 6.0 10.7 chr11 3958199 3958254 (131048262) C MamGypLTR3 LTR/Gypsy (25) 814 758 2796824 713 31.2 6.0 10.7 chr11 3958550 3958922 (131047594) C MamGypLTR3 LTR/Gypsy (82) 757 404 2796824 330 28.9 4.9 1.4 chr11 4719784 4719927 (130286589) C MamGypLTR1c LTR/Gypsy (3) 800 652 2797881 382 32.4 14.6 5.6 chr11 5218769 5219124 (129787392) C MamGypLTR1c LTR/Gypsy (10) 793 406 2798518 349 21.2 2.3 1.2 chr11 6044215 6044300 (128962216) C MamGypLTR3 LTR/Gypsy (24) 815 729 2799522 535 27.7 0.6 6.5 chr11 6269586 6269755 (128736761) + MamGypLTR1b LTR/Gypsy 511 670 (112) 2799781 310 28.2 8.3 0.8 chr11 6550710 6550841 (128455675) C MamGypLTR2c LTR/Gypsy (63) 1005 864 2800225 630 26.9 15.5 4.1 chr11 6598539 6598829 (128407687) + LTR81C LTR/Gypsy 827 1150 (3) 2800268 298 24.6 11.8 0.0 chr11 6724384 6724493 (128282023) + LTR81B LTR/Gypsy 67 189 (1204) 2800417 309 26.2 11.5 6.2 chr11 6724976 6725219 (128281297) + LTR81B LTR/Gypsy 1116 1372 (21) 2800417 321 28.7 5.4 8.8 chr11 6778464 6778764 (128227752) C LTR81B LTR/Gypsy (21) 1372 1033 2800478 313 26.4 2.7 4.5 chr11 6779213 6779323 (128227193) C LTR81B LTR/Gypsy (1216) 177 69 2800478 531 33.9 11.2 2.6 chr11 6788642 6788908 (128217608) C MamGypLTR3 LTR/Gypsy (1) 838 549 2800493 447 27.5 7.7 5.1 chr11 7246267 7246500 (127760016) C MamGypLTR1c LTR/Gypsy (0) 803 564 2801097 275 27.4 5.1 3.1 chr11 7447243 7447340 (127559176) C LTR81C LTR/Gypsy (99) 1054 955 2801351 417 29.9 3.8 1.9 chr11 8321589 8321745 (126684771) C MamGypLTR1b LTR/Gypsy (0) 782 623 2802461 810 27.3 5.8 11.6 chr11 8368457 8368870 (126637646) C LTR81A LTR/Gypsy (28) 1125 736 2802532 313 38.3 3.6 7.2 chr11 8369331 8369634 (126636882) C MamGypLTR2c LTR/Gypsy (487) 581 289 2802534 893 26.9 6.2 5.7 chr11 8369719 8369767 (126636749) C LTR81A LTR/Gypsy (971) 379 340 2802532 893 26.9 6.2 5.7 chr11 8370151 8370470 (126636046) C LTR81A LTR/Gypsy (1011) 339 8 2802532 424 32.1 10.9 2.8 chr11 8585083 8585329 (126421187) + MamGypLTR3 LTR/Gypsy 535 801 (38) 2802796 660 21.6 2.9 11.4 chr11 10338798 10339043 (124667473) + LTR81A LTR/Gypsy 18 242 (1108) 2805958 478 26.2 7.9 1.5 chr11 10927969 10928163 (124078353) C LTR81A LTR/Gypsy (1147) 246 35 2806896 383 28.6 11.6 9.6 chr11 11355489 11355807 (123650709) + MamGypLTR2b LTR/Gypsy 517 847 (75) 2807542 383 28.6 11.6 9.6 chr11 11356111 11356188 (123650328) + MamGypLTR2b LTR/Gypsy 848 922 (0) 2807542 265 36.0 6.8 1.9 chr11 11798596 11798802 (123207714) C MamGypLTR3 LTR/Gypsy (494) 345 129 2808201 291 32.3 6.4 0.6 chr11 12078552 12078707 (122927809) C MamGypLTR1d LTR/Gypsy (0) 813 649 2808626 240 29.2 6.5 5.9 chr11 12080372 12080524 (122925992) C MamGypLTR1d LTR/Gypsy (642) 161 8 2808626 698 26.7 9.2 5.5 chr11 12377737 12378029 (122628487) C LTR81B LTR/Gypsy (33) 1360 1057 2809101 540 30.8 9.5 4.1 chr11 12378530 12378993 (122627523) C LTR81B LTR/Gypsy (870) 523 35 2809101 456 28.0 14.0 8.3 chr11 13075605 13075954 (121930562) C LTR81B LTR/Gypsy (16) 1377 1008 2810119 391 30.8 10.3 1.6 chr11 13847987 13848171 (121158345) + MamGypLTR1b LTR/Gypsy 3 203 (579) 2811228 283 33.9 1.8 0.9 chr11 13849954 13850066 (121156450) + MamGypLTR1b LTR/Gypsy 359 472 (312) 2811228 296 33.9 12.4 0.0 chr11 13850823 13850943 (121155573) + MamGypLTR1b LTR/Gypsy 466 601 (181) 2811228 823 34.4 3.7 3.2 chr11 14554674 14555079 (120451437) C MamGypLTR1a LTR/Gypsy (60) 724 317 2812452 260 20.3 18.5 5.4 chr11 14555315 14555444 (120451072) C MamGypLTR1a LTR/Gypsy (620) 164 18 2812452 569 27.5 3.8 1.0 chr11 14573418 14573626 (120432890) + MamGypLTR1a LTR/Gypsy 3 217 (567) 2812493 329 30.9 17.3 0.0 chr11 14573698 14573865 (120432651) + MamGypLTR1a LTR/Gypsy 347 543 (241) 2812493 368 20.2 6.5 7.2 chr11 14573886 14574024 (120432492) + MamGypLTR1a LTR/Gypsy 666 803 (0) 2812493 479 32.0 4.5 1.8 chr11 15415681 15415929 (119590587) + LTR81 LTR/Gypsy 442 834 (559) 2813722 253 33.3 8.0 2.5 chr11 15454888 15455124 (119551392) + MamGypLTR1d LTR/Gypsy 342 591 (222) 2813784 259 20.2 7.1 14.1 chr11 15724054 15724237 (119282279) + LTR81B LTR/Gypsy 9 179 (1214) 2814233 392 31.4 9.7 5.6 chr11 15777083 15777298 (119229218) + LTR81B LTR/Gypsy 351 575 (818) 2814332 432 24.9 26.1 7.6 chr11 15777801 15778130 (119228386) + LTR81B LTR/Gypsy 799 1393 (0) 2814332 406 34.3 5.9 4.1 chr11 15791138 15791732 (119214784) + MamGypLTR2b LTR/Gypsy 258 920 (2) 2814355 369 29.1 7.4 11.7 chr11 15841135 15841527 (119164989) C MamGypLTR3 LTR/Gypsy (6) 833 458 2814430 259 28.9 13.4 0.0 chr11 15971502 15971598 (119034918) C MamGypLTR1c LTR/Gypsy (10) 793 684 2814663 257 25.5 6.2 3.1 chr11 16328843 16328939 (118677577) + MamGypLTR2b LTR/Gypsy 749 848 (74) 2815092 383 28.8 15.9 6.4 chr11 17502371 17502527 (117503989) + MamGypLTR1c LTR/Gypsy 600 770 (12) 2817024 225 26.9 2.9 1.5 chr11 17702549 17702616 (117303900) C LTR81 LTR/Gypsy (996) 193 125 2817299 343 25.3 5.1 5.1 chr11 18089456 18089630 (116916886) C LTR81B LTR/Gypsy (8) 1385 1211 2817962 297 17.5 1.8 0.0 chr11 18279675 18279731 (116726785) + MamGyp-int LTR/Gypsy 2090 2147 (2915) 2818241 294 26.6 8.4 2.1 chr11 18794702 18794843 (116211673) + MamGypLTR1b LTR/Gypsy 51 201 (581) 2819258 377 21.2 6.5 4.1 chr11 18795158 18795280 (116211236) + MamGypLTR1b LTR/Gypsy 642 767 (15) 2819258 541 25.5 6.2 9.3 chr11 19354983 19355241 (115651275) C MamGypLTR2b LTR/Gypsy (8) 914 664 2820079 235 30.3 9.4 7.1 chr11 19448277 19448500 (115558016) C MamGypLTR3 LTR/Gypsy (64) 775 547 2820218 234 30.8 0.0 9.9 chr11 21142413 21142513 (113864003) + MamGypLTR1c LTR/Gypsy 53 143 (660) 2822952 316 33.8 5.9 3.1 chr11 21143009 21143298 (113863218) + MamGypLTR1c LTR/Gypsy 506 803 (0) 2822952 495 31.1 15.7 2.8 chr11 21230459 21230706 (113775810) + MamGypLTR1b LTR/Gypsy 443 722 (60) 2823094 259 34.9 9.3 2.4 chr11 21424653 21424899 (113581617) C MamGypLTR1b LTR/Gypsy (35) 747 484 2823397 243 31.1 4.0 0.0 chr11 21425354 21425427 (113581089) C MamGypLTR1b LTR/Gypsy (323) 459 383 2823397 228 23.5 9.0 4.5 chr11 21425696 21425784 (113580732) C MamGypLTR1b LTR/Gypsy (689) 93 1 2823397 442 34.8 9.8 5.8 chr11 21624438 21625172 (113381344) + MamGypLTR2b LTR/Gypsy 159 922 (0) 2823677 250 23.8 0.6 22.7 chr11 21668380 21668422 (113338094) C LTR81A LTR/Gypsy (22) 1328 1288 2823738 250 23.8 0.6 22.7 chr11 21668660 21668778 (113337738) C LTR81A LTR/Gypsy (63) 1287 1202 2823738 294 33.8 4.0 4.9 chr11 21795973 21796196 (113210320) C LTR81A LTR/Gypsy (505) 845 624 2823935 359 29.8 8.2 7.7 chr11 22179461 22179659 (112826857) C MamGypLTR1c LTR/Gypsy (366) 437 221 2824451 320 17.1 5.1 2.6 chr11 22327690 22327767 (112678749) C LTR81B LTR/Gypsy (1072) 321 242 2824674 361 32.5 4.7 9.3 chr11 22620671 22620884 (112385632) + MamGypLTR2c LTR/Gypsy 16 219 (849) 2825161 267 32.5 1.8 0.0 chr11 22621833 22621946 (112384570) + MamGypLTR2c LTR/Gypsy 878 993 (75) 2825161 232 34.4 8.7 1.6 chr11 24670323 24670364 (110336152) C MamGypLTR1a LTR/Gypsy (18) 766 727 2827974 232 34.4 8.7 1.6 chr11 24670445 24670528 (110335988) C MamGypLTR1a LTR/Gypsy (58) 726 632 2827974 425 22.4 17.6 1.9 chr11 26953712 26953870 (108052646) + MamGypLTR2b LTR/Gypsy 711 894 (28) 2831234 454 32.7 5.7 0.5 chr11 27173814 27174022 (107832494) + MamGypLTR1a LTR/Gypsy 359 578 (206) 2831542 884 31.0 7.9 3.8 chr11 27642612 27642980 (107363536) C MamGypLTR1a LTR/Gypsy (0) 784 401 2832321 799 26.6 1.6 6.3 chr11 27643036 27643288 (107363228) C MamGypLTR1a LTR/Gypsy (541) 241 1 2832321 266 23.6 6.5 4.3 chr11 27988862 27988954 (107017562) + MamGypLTR1c LTR/Gypsy 107 201 (602) 2832866 390 29.2 7.4 1.5 chr11 28005394 28005607 (107000909) + MamGypLTR2b LTR/Gypsy 564 914 (8) 2832901 559 31.9 9.3 4.2 chr11 28496923 28497233 (106509283) C MamGypLTR3 LTR/Gypsy (122) 717 391 2833565 231 29.4 3.4 9.8 chr11 28522459 28522662 (106483854) + LTR81B LTR/Gypsy 124 314 (1036) 2833610 694 30.9 2.0 3.3 chr11 28523212 28523364 (106483152) + LTR81B LTR/Gypsy 878 1061 (332) 2833610 694 29.9 1.5 3.5 chr11 28523672 28523817 (106482699) + LTR81B LTR/Gypsy 1062 1201 (192) 2833610 318 27.1 9.7 0.8 chr11 28524030 28524163 (106482353) + LTR81B LTR/Gypsy 1213 1358 (35) 2833610 239 33.7 5.3 0.0 chr11 29129450 29129544 (105876972) + LTR81C LTR/Gypsy 86 185 (968) 2834514 264 29.1 2.3 4.5 chr11 29148413 29148545 (105857971) C MamGypLTR1c LTR/Gypsy (15) 788 659 2834555 288 24.0 5.0 4.0 chr11 29306220 29306319 (105700197) C MamGypLTR1a LTR/Gypsy (0) 784 684 2834783 302 33.8 5.9 8.2 chr11 29572807 29573112 (105433404) C MamGypLTR1b LTR/Gypsy (35) 747 449 2835173 292 35.6 5.1 3.7 chr11 29574554 29574763 (105431753) C MamGypLTR1c LTR/Gypsy (277) 536 321 2835174 1128 31.4 10.2 6.2 chr11 30071881 30072604 (104933912) C MamGypLTR1a LTR/Gypsy (12) 772 20 2835851 600 28.6 12.1 9.3 chr11 30488558 30489316 (104517200) + MamGypLTR1b LTR/Gypsy 3 782 (0) 2836492 280 25.0 3.8 0.9 chr11 30692516 30692620 (104313896) C MamGypLTR2b LTR/Gypsy (57) 865 758 2836807 323 27.4 0.0 3.1 chr11 30803639 30803736 (104202780) C MamGypLTR1a LTR/Gypsy (9) 775 681 2836985 663 31.3 14.7 2.4 chr11 30803858 30804266 (104202250) C MamGypLTR1a LTR/Gypsy (280) 504 46 2836985 284 29.8 0.0 4.1 chr11 30943802 30943899 (104062617) + LTR81 LTR/Gypsy 1091 1184 (5) 2837194 266 26.3 10.9 11.4 chr11 30968016 30968225 (104038291) C LTR81AB LTR/Gypsy (39) 239 31 2837228 283 33.3 0.0 3.6 chr11 31083653 31083736 (103922780) + MamGypLTR2b LTR/Gypsy 141 221 (701) 2837375 296 28.0 4.8 4.8 chr11 31167525 31167620 (103838896) C LTR81 LTR/Gypsy (74) 1115 1020 2837479 296 28.0 4.8 4.8 chr11 31167933 31167959 (103838557) C LTR81 LTR/Gypsy (170) 1019 992 2837479 234 34.3 6.9 5.9 chr11 31168666 31168969 (103837547) C LTR81 LTR/Gypsy (910) 483 177 2837479 243 26.3 3.0 5.9 chr11 31253207 31253307 (103753209) + LTR81C LTR/Gypsy 859 956 (197) 2837617 293 34.1 12.1 1.7 chr11 31363664 31363836 (103642680) + MamGypLTR3 LTR/Gypsy 642 832 (7) 2837767 582 27.8 7.3 10.6 chr11 32282479 32282836 (102723680) + MamGypLTR2c LTR/Gypsy 723 1068 (0) 2839165 424 26.5 8.6 2.6 chr11 32508643 32508793 (102497723) C MamGypLTR1a LTR/Gypsy (42) 742 583 2839573 417 28.7 6.4 4.5 chr11 33502139 33502295 (101504221) C MamGypLTR1b LTR/Gypsy (156) 626 467 2841420 593 29.2 10.0 3.3 chr11 33671443 33671683 (101334833) C MamGypLTR1b LTR/Gypsy (40) 742 486 2841683 278 12.0 0.0 1.9 chr11 33671915 33671967 (101334549) C MamGypLTR1d LTR/Gypsy (14) 799 755 2841684 370 34.8 6.2 2.3 chr11 33672368 33672623 (101333893) C MamGypLTR2b LTR/Gypsy (630) 292 27 2841685 581 21.5 6.2 3.9 chr11 34028543 34028721 (100977795) + LTR81A LTR/Gypsy 1 183 (1167) 2842299 302 26.2 6.1 6.9 chr11 34028806 34028936 (100977580) + LTR81A LTR/Gypsy 366 482 (868) 2842299 1166 32.0 9.5 2.6 chr11 35100654 35101187 (99905329) + LTR81C LTR/Gypsy 83 653 (500) 2843960 562 24.2 8.0 1.2 chr11 35101376 35101538 (99904978) + LTR81C LTR/Gypsy 980 1153 (0) 2843960 225 29.1 0.0 6.0 chr11 35452145 35452228 (99554288) + LTR81 LTR/Gypsy 125 203 (950) 2844473 523 23.6 10.4 6.4 chr11 35452808 35453031 (99553485) + LTR81 LTR/Gypsy 894 1183 (6) 2844473 458 34.1 5.7 4.4 chr11 35476272 35476676 (99529840) + MamGypLTR1a LTR/Gypsy 343 752 (32) 2844500 366 30.8 10.2 4.7 chr11 35597022 35597256 (99409260) C MamGypLTR1c LTR/Gypsy (0) 803 556 2844673 531 32.4 5.9 13.4 chr11 35610777 35611965 (99394551) + LTR81C LTR/Gypsy 37 1136 (17) 2844696 258 30.6 4.5 0.0 chr11 35623992 35624102 (99382414) C MamGypLTR1b LTR/Gypsy (39) 743 628 2844719 232 27.1 2.3 1.2 chr11 35628755 35628840 (99377676) C MamGypLTR2b LTR/Gypsy (10) 912 826 2844725 499 20.4 6.3 3.5 chr11 35861476 35861617 (99144899) + LTR81B LTR/Gypsy 54 199 (1194) 2845097 736 26.4 15.2 6.1 chr11 35872952 35873491 (99133025) + LTR81B LTR/Gypsy 795 1383 (10) 2845120 594 30.0 5.4 9.5 chr11 36501212 36501528 (98504988) + MamGypLTR1d LTR/Gypsy 57 360 (443) 2846180 243 33.0 3.9 6.8 chr11 36610443 36610676 (98395840) + MamGypLTR1d LTR/Gypsy 569 795 (18) 2846317 262 31.5 11.6 0.7 chr11 36721200 36721346 (98285170) + LTR81C LTR/Gypsy 40 202 (1148) 2846467 783 29.2 11.9 3.0 chr11 36722039 36722476 (98284040) + LTR81C LTR/Gypsy 677 1153 (0) 2846467 357 26.2 4.8 4.8 chr11 36777831 36777998 (98228518) + MamGypLTR1b LTR/Gypsy 5 172 (610) 2846566 355 27.2 6.2 1.9 chr11 36778143 36778303 (98228213) + MamGypLTR1b LTR/Gypsy 5 172 (610) 2846567 248 23.4 0.0 0.0 chr11 36872059 36872122 (98134394) C LTR81 LTR/Gypsy (9) 1180 1117 2846721 468 31.9 5.8 1.1 chr11 36947775 36947964 (98058552) C MamGypLTR2c LTR/Gypsy (868) 200 2 2846830 551 21.8 9.6 4.6 chr11 37028979 37029175 (97977341) C LTR81B LTR/Gypsy (1179) 214 8 2846945 350 29.6 6.2 11.1 chr11 37097222 37097574 (97908942) C MamGypLTR1d LTR/Gypsy (477) 336 1 2847048 431 32.6 7.8 2.3 chr11 37647536 37647721 (97358795) C MamGypLTR1a LTR/Gypsy (253) 531 342 2847788 364 27.6 7.7 6.6 chr11 37647806 37647987 (97358529) C MamGypLTR1a LTR/Gypsy (612) 191 8 2847788 283 34.8 4.9 1.4 chr11 38473227 38473369 (96533147) + MamGyp-int LTR/Gypsy 1598 1745 (3317) 2848933 398 34.4 12.6 3.5 chr11 39047066 39047463 (95959053) C MamGypLTR1c LTR/Gypsy (3) 800 367 2849679 256 30.1 1.2 2.4 chr11 39839872 39839956 (95166560) C LTR81B LTR/Gypsy (201) 952 869 2850797 485 29.2 7.7 9.4 chr11 39843291 39843653 (95162863) C LTR81B LTR/Gypsy (1033) 360 4 2850797 584 25.8 6.9 3.7 chr11 40617180 40617396 (94389120) + MamGypLTR1d LTR/Gypsy 13 236 (577) 2851907 274 36.1 8.0 3.6 chr11 40617558 40617833 (94388683) + MamGypLTR1c LTR/Gypsy 438 725 (59) 2851908 227 21.7 3.3 0.0 chr11 41713446 41713505 (93293011) C MamGypLTR2c LTR/Gypsy (40) 882 821 2853502 278 27.7 9.5 1.2 chr11 41715463 41715546 (93290970) C MamGypLTR2c LTR/Gypsy (790) 278 188 2853502 368 26.4 10.3 5.5 chr11 41963998 41964097 (93042419) C MamGypLTR1c LTR/Gypsy (529) 274 166 2853844 368 26.4 10.3 5.5 chr11 41964388 41964539 (93041977) C MamGypLTR1c LTR/Gypsy (638) 165 10 2853844 239 23.4 5.1 2.5 chr11 42427960 42428038 (92578478) C MamGypLTR2c LTR/Gypsy (599) 469 389 2854525 315 34.0 1.9 1.0 chr11 42596730 42596833 (92409683) C MamGypLTR1c LTR/Gypsy (229) 574 470 2854792 413 28.1 9.0 6.9 chr11 42597046 42597290 (92409226) C MamGypLTR1c LTR/Gypsy (538) 265 16 2854792 225 30.9 8.0 2.6 chr11 42666029 42666141 (92340375) + LTR81C LTR/Gypsy 496 614 (539) 2854901 335 32.1 9.1 7.8 chr11 42806892 42807340 (92199176) C MamGypLTR2b LTR/Gypsy (12) 910 456 2855114 480 37.2 6.4 4.6 chr11 42820797 42821295 (92185221) C MamGypLTR1b LTR/Gypsy (3) 779 272 2855135 1367 33.0 10.7 2.3 chr11 42868563 42869182 (92137334) + LTR81C LTR/Gypsy 375 1046 (107) 2855239 282 29.5 6.1 1.8 chr11 42869230 42869343 (92137173) + LTR81C LTR/Gypsy 1035 1153 (0) 2855239 546 31.6 13.0 4.5 chr11 43081405 43082049 (91924467) C MamGypLTR3 LTR/Gypsy (89) 750 51 2855536 263 24.0 2.7 10.7 chr11 43530998 43531109 (91475407) C LTR81AB LTR/Gypsy (130) 148 46 2856234 225 22.5 0.0 0.0 chr11 44582634 44582673 (90423843) C MamGypLTR1a LTR/Gypsy (148) 636 597 2857992 245 27.4 6.1 1.7 chr11 44582980 44583094 (90423422) C MamGypLTR1a LTR/Gypsy (652) 132 13 2857992 614 34.2 4.0 5.7 chr11 44887808 44888210 (90118306) C MamGypLTR1b LTR/Gypsy (56) 726 331 2858594 291 29.2 9.0 1.1 chr11 45127813 45127988 (89878528) C MamGypLTR1b LTR/Gypsy (339) 443 251 2859077 225 19.7 25.8 5.7 chr11 45357657 45357780 (89648736) C MamGypLTR2c LTR/Gypsy (100) 968 820 2859450 462 29.1 5.5 3.3 chr11 45358167 45358347 (89648169) C MamGypLTR2c LTR/Gypsy (821) 247 63 2859451 272 30.1 15.9 2.4 chr11 45549235 45549404 (89457112) C MamGypLTR2b LTR/Gypsy (567) 355 163 2859814 392 24.3 3.2 8.3 chr11 45731860 45732016 (89274500) + MamGypLTR1a LTR/Gypsy 1 149 (635) 2860115 345 29.0 7.0 1.9 chr11 45732043 45732200 (89274316) + MamGypLTR1a LTR/Gypsy 220 385 (399) 2860115 343 26.9 4.9 10.3 chr11 48199904 48200019 (86806497) C LTR81C LTR/Gypsy (67) 1086 975 2865021 343 26.9 4.9 10.3 chr11 48200297 48200382 (86806134) C LTR81C LTR/Gypsy (179) 974 895 2865021 272 30.7 5.8 8.2 chr11 48201188 48201282 (86805234) C LTR81C LTR/Gypsy (979) 371 275 2865021 300 28.5 3.7 0.2 chr11 48201588 48201699 (86804817) C LTR81C LTR/Gypsy (3) 275 163 2865021 540 28.3 8.7 8.3 chr11 48203579 48203867 (86802649) + MamGypLTR3 LTR/Gypsy 505 794 (45) 2865029 328 34.8 2.8 0.0 chr11 48393201 48393341 (86613175) + MamGyp-int LTR/Gypsy 2027 2171 (2891) 2865278 247 28.5 8.7 4.0 chr11 49033893 49034042 (85972474) C MamGypLTR1b LTR/Gypsy (385) 397 241 2865679 277 30.3 3.0 0.0 chr11 50035008 50035106 (84971410) C MamGyp-int LTR/Gypsy (2922) 2140 2039 2867089 232 32.6 4.9 4.9 chr11 56621635 56621776 (78384740) + LTR81B LTR/Gypsy 789 930 (223) 2869921 345 28.6 1.6 1.6 chr11 56621835 56621955 (78384561) + LTR81B LTR/Gypsy 1273 1393 (0) 2869921 249 32.8 5.7 2.5 chr11 56666841 56666962 (78339554) C MamGypLTR3 LTR/Gypsy (334) 505 380 2869999 278 31.6 2.6 8.3 chr11 57372571 57372763 (77633753) C MamGypLTR1a LTR/Gypsy (32) 752 571 2871307 253 25.7 8.8 4.4 chr11 57373118 57373231 (77633285) C MamGypLTR1a LTR/Gypsy (660) 122 4 2871307 294 29.7 0.7 5.9 chr11 57386927 57387062 (77619454) C MamGypLTR3 LTR/Gypsy (210) 629 501 2871338 252 23.9 11.1 2.2 chr11 57623440 57623529 (77382987) + LTR81A LTR/Gypsy 88 185 (1165) 2871757 322 28.6 11.2 9.1 chr11 57936973 57937268 (77069248) C MamGypLTR2c LTR/Gypsy (1) 1067 766 2872265 455 35.4 10.2 2.9 chr11 57937484 57937934 (77068582) C MamGypLTR2c LTR/Gypsy (572) 496 13 2872265 325 23.3 9.8 2.4 chr11 58483930 58484052 (76522464) + MamGypLTR2b LTR/Gypsy 776 907 (15) 2873019 247 29.5 22.1 8.4 chr11 58605001 58605263 (76401253) + MamGypLTR3 LTR/Gypsy 47 345 (494) 2873146 387 33.7 1.7 1.1 chr11 59124402 59124578 (75881938) + MamGypLTR1a LTR/Gypsy 341 518 (266) 2873768 254 29.4 3.5 5.6 chr11 59178258 59178401 (75828115) + MamGypLTR1c LTR/Gypsy 9 149 (654) 2873810 239 36.0 8.7 2.7 chr11 59178808 59178990 (75827526) + MamGypLTR1c LTR/Gypsy 602 795 (18) 2873810 329 27.9 7.3 0.0 chr11 59246966 59247105 (75759411) C MamGypLTR1c LTR/Gypsy (0) 782 635 2873917 546 40.2 4.8 3.2 chr11 60186670 60187111 (74819405) C MamGypLTR1a LTR/Gypsy (159) 625 177 2875408 304 32.5 7.0 7.0 chr11 60374945 60375186 (74631330) C MamGypLTR3 LTR/Gypsy (40) 799 558 2875646 264 26.0 3.9 7.1 chr11 60544849 60545030 (74461486) + MamGypLTR2c LTR/Gypsy 31 206 (862) 2875913 255 17.8 0.0 0.0 chr11 60545403 60545447 (74461069) + MamGypLTR2c LTR/Gypsy 715 759 (309) 2875913 318 21.2 0.4 5.0 chr11 60545460 60545555 (74460961) + MamGypLTR2c LTR/Gypsy 909 981 (87) 2875913 271 28.7 5.8 0.7 chr11 60679384 60679520 (74326996) + MamGypLTR1c LTR/Gypsy 647 790 (13) 2876148 265 25.0 15.9 0.0 chr11 60771292 60771379 (74235137) C MamGypLTR1b LTR/Gypsy (630) 152 51 2876331 484 33.3 13.8 2.6 chr11 61267321 61267668 (73738848) C MamGypLTR2c LTR/Gypsy (680) 388 2 2877308 261 35.3 1.5 2.2 chr11 61973092 61973227 (73033289) + MamGypLTR1b LTR/Gypsy 464 598 (184) 2878573 387 30.5 2.8 7.7 chr11 62079770 62079950 (72926566) C MamGypLTR3 LTR/Gypsy (528) 311 140 2878709 292 26.9 14.0 9.1 chr11 62081225 62081407 (72925109) + LTR81B LTR/Gypsy 1072 1263 (130) 2878713 292 26.9 14.0 9.1 chr11 62081429 62081551 (72924965) + LTR81B LTR/Gypsy 1264 1393 (0) 2878713 417 31.9 5.7 6.1 chr11 62177450 62177729 (72828787) + MamGypLTR1c LTR/Gypsy 456 734 (69) 2878896 372 23.0 10.6 5.6 chr11 63358938 63359098 (71647418) + MamGypLTR3 LTR/Gypsy 462 630 (209) 2880739 451 34.5 8.0 2.8 chr11 64148394 64148437 (70858079) C MamGypLTR1d LTR/Gypsy (8) 805 763 2882224 451 34.5 8.0 2.8 chr11 64148728 64149145 (70857371) C MamGypLTR1d LTR/Gypsy (51) 762 319 2882224 317 20.9 2.1 4.2 chr11 65470891 65470985 (69535531) + MamGypLTR1c LTR/Gypsy 659 751 (52) 2884611 391 32.3 10.3 5.3 chr11 65781393 65781681 (69224835) + MamGypLTR1b LTR/Gypsy 420 735 (47) 2885209 391 32.3 10.3 5.3 chr11 65782297 65782346 (69224170) + MamGypLTR1b LTR/Gypsy 736 776 (6) 2885209 253 31.3 17.2 2.1 chr11 66230661 66230846 (68775670) C MamGypLTR2c LTR/Gypsy (669) 399 186 2886094 284 34.2 3.0 7.4 chr11 66346496 66346697 (68659819) C MamGypLTR3 LTR/Gypsy (113) 726 534 2886350 437 22.8 11.9 2.4 chr11 66503260 66503385 (68503131) + MamGypLTR2c LTR/Gypsy 918 1055 (13) 2886634 268 33.1 11.4 0.6 chr11 66770531 66770697 (68235819) + MamGypLTR2c LTR/Gypsy 680 864 (204) 2887189 235 32.1 10.6 0.7 chr11 67411780 67411920 (67594596) + MamGypLTR3 LTR/Gypsy 685 839 (0) 2888484 478 27.1 6.6 2.8 chr11 67690011 67690192 (67316324) C MamGypLTR1a LTR/Gypsy (3) 781 593 2888912 229 33.6 3.2 4.5 chr11 68743862 68744017 (66262499) + MamGypLTR2b LTR/Gypsy 766 919 (3) 2890729 556 34.9 7.6 3.2 chr11 68746177 68746609 (66259907) + LTR81B LTR/Gypsy 15 466 (927) 2890733 512 29.1 7.1 8.3 chr11 69796161 69796426 (65210090) C MamGypLTR3 LTR/Gypsy (55) 784 522 2892372 490 25.6 7.2 2.8 chr11 71384274 71384454 (63622062) + MamGypLTR1a LTR/Gypsy 593 781 (3) 2894842 420 28.9 4.9 2.5 chr11 72874184 72874346 (62132170) + MamGypLTR3 LTR/Gypsy 673 839 (0) 2897451 237 28.9 12.2 1.0 chr11 72959575 72959672 (62046844) + LTR81C LTR/Gypsy 833 941 (248) 2897616 246 33.8 0.0 0.0 chr11 72959695 72959774 (62046742) + LTR81C LTR/Gypsy 1030 1109 (44) 2897616 250 34.2 8.1 0.0 chr11 73344046 73344156 (61662360) C MamGypLTR3 LTR/Gypsy (87) 752 633 2898401 347 32.6 6.9 5.9 chr11 74114819 74115020 (60891496) C MamGypLTR1b LTR/Gypsy (255) 527 324 2900054 258 31.9 2.4 5.6 chr11 74316351 74316476 (60690040) C MamGypLTR1c LTR/Gypsy (224) 579 458 2900511 1599 25.4 9.7 7.2 chr11 74895404 74896136 (60110380) C MamGypLTR1a LTR/Gypsy (29) 755 5 2901514 226 21.9 4.9 0.0 chr11 74921330 74921370 (60085146) C MamGypLTR1d LTR/Gypsy (430) 383 341 2901564 366 19.7 6.1 7.0 chr11 75293683 75293821 (59712695) + MamGypLTR1b LTR/Gypsy 619 756 (28) 2902366 432 27.0 10.4 3.0 chr11 75863890 75864091 (59142425) C MamGypLTR2c LTR/Gypsy (6) 1062 846 2903374 405 27.1 6.6 0.0 chr11 76458398 76458519 (58547997) C MamGypLTR1c LTR/Gypsy (28) 775 646 2904507 337 31.5 7.1 5.0 chr11 76459208 76459575 (58546941) C MamGypLTR2b LTR/Gypsy (498) 570 60 2904509 343 31.2 11.3 6.6 chr11 76464696 76464952 (58541564) C LTR81B LTR/Gypsy (6) 1387 1119 2904523 321 30.8 22.3 0.0 chr11 76467462 76467708 (58538808) C MamGypLTR3 LTR/Gypsy (347) 492 191 2904533 253 30.5 6.1 0.8 chr11 76872370 76872501 (58134015) C MamGypLTR1b LTR/Gypsy (179) 603 465 2905259 322 23.6 8.9 4.1 chr11 77977494 77977639 (57028877) + MamGypLTR2b LTR/Gypsy 742 894 (28) 2907553 400 28.8 4.5 0.8 chr11 78101632 78101764 (56904752) + LTR81 LTR/Gypsy 591 728 (461) 2907789 308 27.3 8.0 1.8 chr11 79521028 79521139 (55485377) + MamGypLTR1b LTR/Gypsy 623 741 (41) 2910378 284 32.1 0.6 5.4 chr11 79529853 79530020 (55476496) C LTR81AB LTR/Gypsy (6) 272 113 2910397 411 36.1 7.7 2.4 chr11 79626354 79626640 (55379876) + MamGypLTR2c LTR/Gypsy 295 596 (472) 2910561 227 29.7 3.0 0.0 chr11 79869886 79869986 (55136530) + MamGypLTR1a LTR/Gypsy 643 746 (38) 2911012 250 32.5 2.3 3.1 chr11 79921893 79922022 (55084494) C LTR81A LTR/Gypsy (2) 1348 1220 2911095 365 28.3 8.2 10.8 chr11 80099638 80099978 (54906538) + MamGypLTR2b LTR/Gypsy 590 921 (1) 2911402 384 31.4 7.2 3.0 chr11 80593398 80593660 (54412856) + LTR81A LTR/Gypsy 1077 1350 (0) 2912218 376 26.5 5.3 13.3 chr11 81681174 81681495 (53325021) C LTR81B LTR/Gypsy (59) 1334 1039 2913889 267 22.0 10.6 3.5 chr11 82047287 82047371 (52959145) C MamGypLTR3 LTR/Gypsy (35) 804 714 2914389 452 20.4 0.9 1.8 chr11 82149271 82149380 (52857136) C MamGypLTR2b LTR/Gypsy (1) 921 813 2914544 537 25.9 6.6 4.8 chr11 82264481 82264752 (52741764) + LTR81C LTR/Gypsy 817 1093 (60) 2914738 433 27.3 11.7 8.3 chr11 82409275 82409334 (52597182) C MamGypLTR3 LTR/Gypsy (15) 824 756 2915015 433 27.3 11.7 8.3 chr11 82409715 82410004 (52596512) C MamGypLTR3 LTR/Gypsy (84) 755 462 2915015 410 26.1 22.4 2.3 chr11 82432453 82432711 (52573805) + MamGypLTR3 LTR/Gypsy 49 359 (480) 2915057 479 32.4 2.6 6.7 chr11 82432989 82433256 (52573260) + MamGypLTR3 LTR/Gypsy 583 839 (0) 2915057 336 30.4 2.6 9.6 chr11 82465555 82465811 (52540705) + MamGypLTR1b LTR/Gypsy 1 229 (555) 2915113 385 29.9 5.4 3.4 chr11 82496862 82497065 (52509451) C MamGypLTR1a LTR/Gypsy (2) 801 594 2915164 568 29.8 5.8 5.0 chr11 82497379 82497729 (52508787) C MamGypLTR1a LTR/Gypsy (396) 386 6 2915164 1172 32.7 7.5 4.0 chr11 82503264 82503631 (52502885) C LTR81C LTR/Gypsy (123) 1030 641 2915175 1172 32.7 7.5 4.0 chr11 82503944 82504277 (52502239) C LTR81C LTR/Gypsy (513) 640 303 2915175 297 36.1 2.6 4.2 chr11 82504334 82504524 (52501992) C LTR81A LTR/Gypsy (854) 496 309 2915178 274 21.9 22.9 1.1 chr11 83048997 83049101 (51957415) C LTR81C LTR/Gypsy (587) 566 463 2916140 479 25.8 10.1 5.1 chr11 83148929 83149165 (51857351) C LTR81B LTR/Gypsy (146) 1247 999 2916324 618 25.9 6.7 4.0 chr11 83656351 83656575 (51349941) + MamGypLTR1b LTR/Gypsy 5 235 (547) 2917180 268 28.9 13.6 3.4 chr11 83836945 83837091 (51169425) + LTR81C LTR/Gypsy 957 1118 (35) 2917455 444 26.0 11.2 4.8 chr11 83854755 83854960 (51151556) + MamGypLTR1d LTR/Gypsy 14 232 (581) 2917489 253 26.8 1.9 9.3 chr11 83855776 83855882 (51150634) + MamGypLTR1d LTR/Gypsy 599 697 (106) 2917489 246 22.6 18.1 1.1 chr11 84299442 84299535 (50706981) + MamGypLTR1b LTR/Gypsy 2 111 (671) 2918212 298 33.1 3.5 8.4 chr11 84906350 84906567 (50099949) + MamGypLTR2c LTR/Gypsy 729 941 (127) 2919157 298 33.1 3.5 8.4 chr11 84906870 84906911 (50099605) + MamGypLTR2c LTR/Gypsy 942 976 (92) 2919157 302 26.9 4.8 5.6 chr11 85294889 85295014 (49711502) C LTR81C LTR/Gypsy (0) 1153 1029 2919691 1210 33.1 6.8 3.4 chr11 85327480 85328042 (49678474) + MamGypLTR1c LTR/Gypsy 14 595 (208) 2919738 235 31.2 18.0 0.0 chr11 85328060 85328187 (49678329) + MamGypLTR1c LTR/Gypsy 647 797 (16) 2919738 277 27.1 9.2 0.8 chr11 85341702 85341820 (49664696) C MamGypLTR1b LTR/Gypsy (235) 547 419 2919753 329 26.9 17.8 1.8 chr11 85610278 85610440 (49396076) C LTR81C LTR/Gypsy (23) 1130 942 2920206 327 19.8 4.7 4.7 chr11 86135145 86135229 (48871287) C MamGypLTR1c LTR/Gypsy (616) 187 103 2921139 319 20.0 1.3 2.6 chr11 86400609 86400685 (48605831) + MamGypLTR2b LTR/Gypsy 773 848 (74) 2921526 308 24.7 1.2 0.0 chr11 86400731 86400811 (48605705) + MamGypLTR2b LTR/Gypsy 837 918 (4) 2921526 371 29.3 14.4 1.6 chr11 86433626 86433819 (48572697) C MamGypLTR3 LTR/Gypsy (20) 819 601 2921578 231 24.6 4.6 0.0 chr11 86473491 86473555 (48532961) + MamGypLTR2b LTR/Gypsy 811 878 (44) 2921652 380 34.0 5.3 8.9 chr11 86729100 86729457 (48277059) + MamGypLTR3 LTR/Gypsy 368 712 (127) 2922064 327 27.9 10.2 10.6 chr11 87134896 87135151 (47871365) C LTR81A LTR/Gypsy (1018) 332 78 2922682 274 31.5 4.8 1.6 chr11 87514930 87515116 (47491400) C MamGypLTR2b LTR/Gypsy (29) 893 701 2923189 267 30.0 13.9 7.5 chr11 87515428 87515600 (47490916) C MamGypLTR2b LTR/Gypsy (596) 472 289 2923189 270 29.1 7.7 1.0 chr11 87654739 87654842 (47351674) C MamGypLTR2b LTR/Gypsy (25) 897 807 2923421 287 31.4 4.2 9.9 chr11 87773087 87773277 (47233239) + MamGypLTR3 LTR/Gypsy 545 724 (115) 2923523 635 33.5 13.7 5.5 chr11 88169131 88169642 (46836874) + MamGypLTR1a LTR/Gypsy 1 554 (230) 2924124 333 32.4 13.3 4.9 chr11 89605728 89606094 (45400422) C MamGypLTR1b LTR/Gypsy (129) 653 256 2926235 281 31.5 16.0 5.2 chr11 90117331 90117598 (44888918) + LTR81A LTR/Gypsy 927 1223 (127) 2926913 743 34.4 7.4 6.9 chr11 90374151 90374861 (44631655) C MamGypLTR1b LTR/Gypsy (6) 776 60 2927274 743 34.4 7.4 6.9 chr11 90375154 90375213 (44631303) C MamGypLTR1b LTR/Gypsy (723) 59 2 2927274 317 25.6 1.2 2.4 chr11 91702183 91702266 (43304250) C LTR81A LTR/Gypsy (411) 939 857 2929057 312 26.3 16.1 3.1 chr11 92966119 92966310 (42040206) + LTR81B LTR/Gypsy 1090 1306 (87) 2930804 449 27.8 12.6 2.3 chr11 93289456 93289669 (41716847) + MamGypLTR1c LTR/Gypsy 1 236 (567) 2931269 250 28.9 0.0 0.0 chr11 93290027 93290078 (41716438) + MamGypLTR1c LTR/Gypsy 453 504 (309) 2931269 429 25.5 6.7 9.6 chr11 93290459 93290666 (41715850) + MamGypLTR1c LTR/Gypsy 543 744 (59) 2931269 271 17.6 7.9 0.3 chr11 93824146 93824230 (41182286) + MamGypLTR1d LTR/Gypsy 696 796 (17) 2932180 270 23.5 0.0 4.5 chr11 94685601 94685689 (40320827) + MamGypLTR2b LTR/Gypsy 822 906 (16) 2933411 544 24.7 6.3 3.5 chr11 95274661 95274938 (39731578) + LTR81B LTR/Gypsy 1 300 (1093) 2934268 468 33.7 6.5 1.0 chr11 95428378 95428671 (39577845) + LTR81A LTR/Gypsy 9 318 (1032) 2934480 247 35.2 8.1 1.2 chr11 95429117 95429277 (39577239) + LTR81A LTR/Gypsy 629 800 (550) 2934480 267 27.7 8.3 1.6 chr11 96506381 96506501 (38500015) C MamGypLTR1b LTR/Gypsy (7) 775 647 2935743 324 37.2 0.0 2.6 chr11 96515336 96515451 (38491065) C MamGyp-int LTR/Gypsy (3672) 1390 1278 2935749 323 24.0 4.0 1.3 chr11 96516039 96516114 (38490402) C MamGyp-int LTR/Gypsy (4615) 447 370 2935749 853 31.0 9.5 2.0 chr11 96705945 96706395 (38300121) + LTR81A LTR/Gypsy 11 495 (855) 2935967 423 25.4 6.8 3.4 chr11 96714409 96714555 (38291961) C MamGypLTR1c LTR/Gypsy (35) 768 617 2935982 333 26.0 8.6 3.3 chr11 96715771 96715921 (38290595) + LTR81A LTR/Gypsy 18 176 (1174) 2935986 351 31.8 6.3 4.9 chr11 96728093 96728297 (38278219) + MamGypLTR1b LTR/Gypsy 9 216 (566) 2936004 797 34.7 6.3 8.8 chr11 96879419 96880209 (38126307) + LTR81C LTR/Gypsy 359 1129 (24) 2936183 354 34.2 4.2 1.7 chr11 97755496 97755614 (37250902) C MamGypLTR1b LTR/Gypsy (261) 523 402 2937195 400 24.2 5.1 4.6 chr11 97756080 97756232 (37250284) C MamGypLTR1b LTR/Gypsy (575) 207 52 2937195 309 33.6 4.9 0.8 chr11 97758670 97758792 (37247724) C MamGypLTR1b LTR/Gypsy (560) 222 95 2937200 280 33.2 8.8 3.4 chr11 99155871 99156166 (35850350) C LTR81C LTR/Gypsy (2) 1151 840 2939064 402 30.9 6.6 9.9 chr11 99223193 99223550 (35782966) C LTR81A LTR/Gypsy (57) 1293 802 2939172 776 34.9 10.4 7.2 chr11 99526974 99527529 (35478987) + MamGypLTR1a LTR/Gypsy 1 574 (208) 2939583 247 25.8 5.3 6.3 chr11 99527628 99527722 (35478794) + MamGypLTR1a LTR/Gypsy 676 769 (15) 2939583 746 35.9 4.4 2.8 chr11 100410709 100411098 (34595418) C MamGypLTR1c LTR/Gypsy (19) 784 389 2940652 308 26.6 6.6 10.9 chr11 100411242 100411515 (34595001) C MamGypLTR1c LTR/Gypsy (509) 294 33 2940652 263 13.6 3.3 3.3 chr11 100503263 100503323 (34503193) + MamGypLTR1d LTR/Gypsy 752 812 (1) 2940786 635 26.1 18.6 4.7 chr11 100901267 100901648 (34104868) + LTR81A LTR/Gypsy 21 455 (895) 2941374 494 19.8 1.0 1.0 chr11 101071331 101071422 (33935094) + LTR81AB LTR/Gypsy 128 219 (59) 2941592 313 33.7 4.5 3.7 chr11 101146701 101146941 (33859575) + MamGypLTR1b LTR/Gypsy 226 467 (315) 2941677 317 32.3 0.8 0.8 chr11 101147077 101147207 (33859309) + MamGypLTR1b LTR/Gypsy 652 782 (0) 2941677 637 30.5 18.3 6.2 chr11 101196252 101196957 (33809559) C MamGypLTR1c LTR/Gypsy (0) 803 13 2941748 372 29.8 3.5 6.1 chr11 101611895 101612123 (33394393) C LTR81A LTR/Gypsy (1) 1349 1127 2942299 596 30.9 14.4 5.9 chr11 102359469 102359980 (32646536) C MamGypLTR1a LTR/Gypsy (8) 795 240 2943506 581 32.4 15.0 0.8 chr11 102681439 102681805 (32324711) + MamGypLTR1a LTR/Gypsy 1 419 (365) 2943989 325 32.6 31.9 1.1 chr11 102750588 102750927 (32255589) + MamGypLTR1a LTR/Gypsy 277 711 (73) 2944083 232 14.3 0.0 0.0 chr11 102753905 102753946 (32252570) + MamGypLTR1d LTR/Gypsy 74 115 (698) 2944094 659 28.3 13.0 0.3 chr11 103442253 103442553 (31563963) C LTR81 LTR/Gypsy (8) 1181 843 2945104 339 20.8 18.6 4.5 chr11 103674580 103674735 (31331781) C MamGypLTR2b LTR/Gypsy (15) 907 730 2945448 392 33.7 10.3 9.2 chr11 103948357 103949134 (31057382) C LTR81C LTR/Gypsy (33) 1120 335 2945797 531 35.7 9.1 1.3 chr11 104203070 104203367 (30803149) C MamGypLTR3 LTR/Gypsy (313) 526 206 2946174 264 21.8 0.0 0.0 chr11 104910246 104910300 (30096216) + MamGypLTR1c LTR/Gypsy 99 153 (650) 2947175 301 27.0 3.3 1.1 chr11 104944788 104944877 (30061639) + MamGypLTR1b LTR/Gypsy 92 183 (599) 2947219 321 29.7 4.5 3.0 chr11 105012661 105012792 (29993724) + MamGypLTR1c LTR/Gypsy 20 153 (650) 2947284 398 36.6 11.6 0.0 chr11 105148065 105148296 (29858220) C MamGypLTR3 LTR/Gypsy (325) 514 256 2947508 348 23.5 2.3 1.9 chr11 105347543 105347650 (29658866) C LTR81B LTR/Gypsy (246) 943 880 2947765 231 31.2 9.4 4.3 chr11 105347851 105347967 (29658549) C LTR81B LTR/Gypsy (580) 770 648 2947765 437 33.7 7.7 2.3 chr11 105348129 105348389 (29658127) C LTR81B LTR/Gypsy (969) 424 150 2947765 245 31.8 11.5 5.1 chr11 105990260 105990415 (29016101) + MamGypLTR3 LTR/Gypsy 260 425 (414) 2948662 285 19.5 6.6 4.4 chr11 106076218 106076308 (28930208) + MamGypLTR1d LTR/Gypsy 711 803 (10) 2948786 241 31.2 3.0 3.0 chr11 106083662 106083793 (28922723) C MamGypLTR1a LTR/Gypsy (22) 762 631 2948802 501 23.8 3.6 5.7 chr11 107098449 107098640 (27907876) C MamGypLTR2c LTR/Gypsy (11) 1057 870 2950145 392 25.7 3.2 5.3 chr11 107099810 107099998 (27906518) C MamGypLTR2c LTR/Gypsy (878) 190 6 2950145 440 25.3 6.0 3.4 chr11 107785306 107785518 (27220998) C MamGypLTR2b LTR/Gypsy (31) 891 705 2951334 310 27.7 5.8 12.0 chr11 107973394 107973542 (27032974) C LTR81A LTR/Gypsy (1114) 236 97 2951752 310 27.7 5.8 12.0 chr11 107973822 107973913 (27032603) C LTR81A LTR/Gypsy (1254) 96 10 2951752 848 31.2 9.5 4.1 chr11 108890661 108891051 (26115465) + MamGypLTR1a LTR/Gypsy 373 784 (0) 2953196 869 24.8 4.7 4.4 chr11 108929864 108930180 (26076336) + LTR81B LTR/Gypsy 8 325 (1068) 2953261 225 22.2 12.2 2.7 chr11 108931208 108931281 (26075235) + LTR81B LTR/Gypsy 1188 1268 (125) 2953261 374 36.4 10.0 4.7 chr11 109017234 109017533 (25988983) + MamGypLTR2b LTR/Gypsy 37 352 (570) 2953376 343 26.5 14.3 6.9 chr11 109018193 109018423 (25988093) + MamGypLTR2b LTR/Gypsy 672 919 (3) 2953378 850 31.0 13.4 5.1 chr11 109299905 109300794 (25705722) C LTR81B LTR/Gypsy (18) 1375 412 2953767 357 23.3 1.2 0.0 chr11 109301958 109302043 (25704473) C LTR81B LTR/Gypsy (29) 1364 1278 2953768 694 36.1 10.7 0.3 chr11 109302076 109302422 (25704094) C LTR81 LTR/Gypsy (260) 929 547 2953769 451 29.7 7.2 10.0 chr11 109843742 109844141 (25162375) + MamGypLTR1d LTR/Gypsy 55 443 (370) 2954464 400 29.3 8.7 5.3 chr11 109844332 109844630 (25161886) + MamGypLTR1d LTR/Gypsy 495 803 (0) 2954464 1074 35.5 7.5 4.9 chr11 110488359 110489113 (24517403) + MamGypLTR1a LTR/Gypsy 1 775 (9) 2955499 227 17.5 7.7 12.3 chr11 110746311 110746505 (24260011) C MamGypLTR2b LTR/Gypsy (23) 899 714 2955892 228 25.0 11.0 4.6 chr11 110775085 110775193 (24231323) + LTR81C LTR/Gypsy 1025 1140 (13) 2955948 261 18.5 1.9 0.0 chr11 110968231 110968284 (24038232) + MamGypLTR2c LTR/Gypsy 95 149 (919) 2956246 233 33.6 0.0 5.2 chr11 111992696 111992811 (23013705) + MamGypLTR3 LTR/Gypsy 259 368 (471) 2957903 572 25.7 8.9 3.1 chr11 112003885 112004109 (23002407) + MamGypLTR1d LTR/Gypsy 576 813 (0) 2957930 424 26.4 5.5 1.4 chr11 112182592 112182737 (22823779) C MamGypLTR1a LTR/Gypsy (2) 782 631 2958247 312 28.6 17.4 6.3 chr11 112530322 112530620 (22475896) C LTR81B LTR/Gypsy (7) 1386 1055 2958746 562 22.6 3.0 8.3 chr11 112559857 112560025 (22446491) + MamGypLTR1b LTR/Gypsy 617 776 (6) 2958779 342 31.2 5.7 6.1 chr11 112669168 112669396 (22337120) C MamGypLTR1d LTR/Gypsy (12) 801 574 2958949 730 31.9 17.1 3.7 chr11 112804258 112804905 (22201611) C MamGypLTR2c LTR/Gypsy (13) 1055 321 2959128 304 26.1 5.1 8.0 chr11 112804980 112805154 (22201362) C MamGypLTR2c LTR/Gypsy (868) 200 31 2959128 237 27.2 7.5 1.1 chr11 114142131 114142223 (20864293) + MamGypLTR2b LTR/Gypsy 790 888 (34) 2961156 298 31.8 7.6 8.6 chr11 114355027 114355435 (20651081) C LTR81A LTR/Gypsy (819) 531 127 2961494 258 19.5 9.4 3.5 chr11 114989583 114989667 (20016849) + MamGypLTR1b LTR/Gypsy 4 93 (689) 2962343 407 32.6 22.4 0.3 chr11 114989789 114990136 (20016380) + MamGypLTR1a LTR/Gypsy 359 783 (1) 2962344 497 30.3 8.2 3.6 chr11 115449822 115450016 (19556500) C MamGypLTR1a LTR/Gypsy (7) 777 574 2962927 531 30.0 2.9 1.7 chr11 115733235 115733475 (19273041) + MamGypLTR2b LTR/Gypsy 672 915 (7) 2963376 978 26.9 15.6 5.3 chr11 116316129 116316622 (18689894) C MamGypLTR2c LTR/Gypsy (522) 546 2 2964302 407 31.1 6.9 3.5 chr11 116457408 116457610 (18548906) + MamGypLTR3 LTR/Gypsy 630 839 (0) 2964555 592 21.2 16.6 0.6 chr11 117645712 117645868 (17360648) C MamGypLTR1a LTR/Gypsy (2) 782 601 2966612 891 28.3 6.5 0.3 chr11 117646043 117646333 (17360183) C MamGypLTR1a LTR/Gypsy (475) 309 1 2966612 460 30.1 1.3 3.3 chr11 117690670 117690820 (17315696) + MamGypLTR3 LTR/Gypsy 674 821 (18) 2966672 266 22.0 15.7 2.0 chr11 117887919 117888020 (17118496) + MamGypLTR2c LTR/Gypsy 216 331 (737) 2966988 650 25.0 18.9 2.4 chr11 119319101 119319391 (15687125) C MamGypLTR1a LTR/Gypsy (14) 770 432 2969588 784 32.2 15.4 5.3 chr11 119701628 119702451 (15304065) + LTR81A LTR/Gypsy 429 1335 (15) 2970210 247 23.0 5.3 1.3 chr11 120843758 120843832 (14162684) + MamGypLTR2b LTR/Gypsy 690 767 (155) 2972010 234 22.9 0.0 2.0 chr11 121873720 121873768 (13132748) + MamGypLTR2c LTR/Gypsy 38 85 (983) 2973375 705 30.3 4.5 0.0 chr11 121875195 121875392 (13131124) + MamGypLTR2c LTR/Gypsy 361 567 (501) 2973375 280 28.6 14.8 7.2 chr11 122439583 122439906 (12566610) C LTR81A LTR/Gypsy (11) 1339 831 2974185 312 10.3 0.0 2.8 chr11 122439972 122440016 (12566500) C LTR81A LTR/Gypsy (1242) 151 110 2974186 312 27.0 0.8 13.3 chr11 122440329 122440416 (12566100) C LTR81A LTR/Gypsy (1237) 113 35 2974186 785 31.4 8.7 2.2 chr11 122441058 122441425 (12565091) + MamGypLTR1a LTR/Gypsy 393 784 (0) 2974189 747 31.1 11.2 5.0 chr11 122491660 122491725 (12514791) C MamGypLTR1b LTR/Gypsy (67) 715 662 2974291 747 31.1 11.2 5.0 chr11 122492036 122492513 (12514003) C MamGypLTR1b LTR/Gypsy (121) 661 137 2974291 428 28.9 4.1 3.8 chr11 124045190 124045432 (10961084) C MamGypLTR2b LTR/Gypsy (16) 906 624 2976968 582 29.6 12.1 1.6 chr11 124565304 124565560 (10440956) C MamGypLTR3 LTR/Gypsy (15) 824 541 2977721 1207 28.9 4.2 4.6 chr11 124807236 124807736 (10198780) + LTR81B LTR/Gypsy 10 508 (885) 2978056 1042 31.0 12.8 2.6 chr11 124807794 124808339 (10198177) + LTR81B LTR/Gypsy 789 1390 (3) 2978056 493 32.9 8.3 4.9 chr11 125619081 125619550 (9386966) + MamGypLTR1c LTR/Gypsy 109 594 (209) 2979262 231 24.6 2.9 1.4 chr11 125809602 125809671 (9196845) C MamGypLTR2c LTR/Gypsy (0) 1068 998 2979484 400 24.3 14.8 2.8 chr11 125810288 125810503 (9196013) C MamGypLTR1a LTR/Gypsy (460) 324 83 2979486 271 28.8 20.1 3.4 chr11 126663533 126663766 (8342750) + LTR81B LTR/Gypsy 1121 1393 (0) 2980780 337 26.1 1.9 10.1 chr11 127359501 127359709 (7646807) + MamGypLTR1c LTR/Gypsy 6 197 (606) 2981713 332 33.5 6.8 1.0 chr11 128147721 128147959 (6858557) C MamGypLTR1a LTR/Gypsy (85) 697 445 2982709 397 36.6 5.1 5.6 chr11 128223471 128223861 (6782655) + MamGypLTR2c LTR/Gypsy 131 519 (549) 2982807 238 24.6 14.5 2.6 chr11 128224212 128224328 (6782188) + MamGypLTR2b LTR/Gypsy 777 907 (15) 2982808 298 29.2 17.3 6.8 chr11 128255435 128255897 (6750619) + LTR81A LTR/Gypsy 90 601 (749) 2982870 646 31.2 11.4 5.4 chr11 128256107 128256625 (6749891) + LTR81A LTR/Gypsy 629 1178 (172) 2982870 469 30.0 10.0 0.0 chr11 129445379 129445548 (5560968) C MamGypLTR1b LTR/Gypsy (232) 550 364 2984442 420 21.9 21.7 6.4 chr11 130560296 130560561 (4445955) C LTR81AB LTR/Gypsy (1038) 312 6 2986166 491 22.6 11.0 7.5 chr11 130646826 130647079 (4359437) + LTR81A LTR/Gypsy 22 284 (1066) 2986276 265 24.1 17.4 7.6 chr11 130647796 130647979 (4358537) + LTR81A LTR/Gypsy 308 509 (841) 2986276 394 30.8 2.4 8.9 chr11 130648398 130648559 (4357957) + LTR81A LTR/Gypsy 1046 1196 (154) 2986276 394 30.8 2.4 8.9 chr11 130648947 130649029 (4357487) + LTR81A LTR/Gypsy 1197 1275 (75) 2986276 255 18.6 1.7 0.0 chr11 131078828 131078886 (3927630) + MamGypLTR1b LTR/Gypsy 684 743 (39) 2986800 300 29.8 7.6 0.0 chr11 131147597 131147727 (3858789) + MamGypLTR2c LTR/Gypsy 438 578 (490) 2986888 309 27.2 2.6 4.3 chr11 131703673 131703797 (3302719) C MamGypLTR2b LTR/Gypsy (16) 906 798 2987643 270 22.9 1.3 6.7 chr11 131872823 131872897 (3133619) C MamGypLTR1a LTR/Gypsy (608) 176 106 2987871 301 36.5 4.3 3.5 chr11 132223803 132224032 (2782484) + MamGyp-int LTR/Gypsy 635 866 (4196) 2988260 378 31.1 8.3 8.0 chr11 132226640 132226953 (2779563) + MamGypLTR3 LTR/Gypsy 494 808 (31) 2988263 305 31.5 0.0 1.8 chr11 133281140 133281249 (1725267) + MamGypLTR1b LTR/Gypsy 672 779 (3) 2989575 248 26.2 1.2 1.2 chr11 133849485 133849569 (1156947) C MamGypLTR1b LTR/Gypsy (10) 772 688 2990231 265 23.3 4.0 1.4 chr11 133849752 133849825 (1156691) C MamGypLTR1b LTR/Gypsy (341) 441 366 2990231 338 29.2 12.5 7.3 chr11 133850596 133850883 (1155633) C MamGypLTR1b LTR/Gypsy (479) 303 1 2990231 510 32.6 12.2 8.1 chr11 134425868 134426344 (580172) C MamGypLTR3 LTR/Gypsy (3) 836 328 2990957 510 32.6 12.2 8.1 chr11 134426989 134427115 (579401) C MamGypLTR3 LTR/Gypsy (512) 327 208 2990957 398 31.0 12.3 2.8 chr11 134589745 134589996 (416520) C MamGypLTR1a LTR/Gypsy (28) 756 481 2991164 414 32.6 3.1 7.0 chr11 134593786 134594072 (412444) C MamGypLTR1a LTR/Gypsy (508) 276 1 2991164 297 30.4 17.9 6.9 chr12 773505 773911 (133077984) C LTR81C LTR/Gypsy (4) 1149 698 2992664 814 22.7 3.0 5.6 chr12 774668 774735 (133077160) C LTR81B LTR/Gypsy (1132) 261 196 2992667 814 22.7 3.0 5.6 chr12 775174 775363 (133076532) C LTR81B LTR/Gypsy (1198) 195 3 2992667 230 34.6 0.0 4.7 chr12 883253 883337 (132968558) C MamGypLTR1b LTR/Gypsy (206) 576 496 2992924 1735 30.9 12.4 3.1 chr12 2667097 2667999 (131183896) C LTR81B LTR/Gypsy (0) 1393 407 2995732 371 19.1 6.2 2.1 chr12 4585251 4585346 (129266549) C MamGypLTR1b LTR/Gypsy (675) 107 8 2998803 250 33.0 4.7 0.9 chr12 4747804 4747910 (129103985) C MamGypLTR3 LTR/Gypsy (54) 785 675 2999044 405 31.8 8.0 1.1 chr12 5736052 5736226 (128115669) + MamGypLTR3 LTR/Gypsy 653 839 (0) 3000429 228 20.9 13.4 0.0 chr12 5876808 5876874 (127975021) C MamGypLTR2c LTR/Gypsy (131) 937 862 3000620 308 28.0 2.7 0.0 chr12 7154726 7154800 (126697095) + MamGyp-int LTR/Gypsy 239 315 (4747) 3002853 267 31.3 13.9 1.2 chr12 7423446 7423610 (126428285) + MamGypLTR2c LTR/Gypsy 31 216 (852) 3003163 356 35.7 4.8 2.1 chr12 7423925 7424302 (126427593) + MamGypLTR2c LTR/Gypsy 671 1058 (10) 3003163 385 27.3 7.7 2.8 chr12 8508525 8508705 (125343190) C MamGypLTR1b LTR/Gypsy (3) 779 590 3005091 352 36.9 4.5 2.2 chr12 8604455 8604676 (125247219) + MamGypLTR1c LTR/Gypsy 548 774 (29) 3005239 249 38.6 1.8 3.4 chr12 8652039 8652232 (125199663) C MamGypLTR1a LTR/Gypsy (78) 706 518 3005306 277 31.2 13.5 6.5 chr12 9201565 9201904 (124649991) + MamGypLTR1a LTR/Gypsy 163 525 (278) 3006273 365 22.9 10.0 0.9 chr12 9201963 9202072 (124649823) + MamGypLTR1a LTR/Gypsy 628 747 (37) 3006273 346 19.2 2.2 17.1 chr12 9215843 9216007 (124635888) C LTR81A LTR/Gypsy (1234) 159 18 3006304 298 25.0 10.8 2.0 chr12 9216092 9216193 (124635702) C MamGypLTR1c LTR/Gypsy (10) 793 683 3006305 234 29.5 11.3 0.9 chr12 9359113 9359218 (124492677) + LTR81AB LTR/Gypsy 3 119 (159) 3006465 226 34.6 3.6 5.5 chr12 9359261 9359370 (124492525) + LTR81AB LTR/Gypsy 259 366 (1027) 3006465 487 38.3 7.2 7.8 chr12 10019274 10019992 (123831903) + MamGypLTR1a LTR/Gypsy 68 782 (2) 3007298 428 33.5 7.8 7.3 chr12 10884972 10885393 (122966502) + MamGypLTR1a LTR/Gypsy 116 539 (245) 3008508 314 26.9 4.6 0.9 chr12 10888996 10889104 (122962791) + MamGypLTR1a LTR/Gypsy 664 776 (6) 3008508 367 27.2 5.8 6.9 chr12 11154147 11154320 (122697575) + MamGypLTR1d LTR/Gypsy 629 800 (13) 3008854 334 33.8 2.3 10.2 chr12 11384094 11384395 (122467500) + MamGypLTR2b LTR/Gypsy 10 437 (631) 3009143 228 28.6 0.0 3.8 chr12 11384980 11385059 (122466836) + MamGypLTR2b LTR/Gypsy 989 1065 (3) 3009143 230 32.6 9.4 1.0 chr12 11730876 11730971 (122120924) + MamGypLTR2b LTR/Gypsy 180 283 (639) 3009604 494 26.4 13.7 2.2 chr12 12828209 12828342 (121023553) + MamGypLTR1a LTR/Gypsy 575 729 (55) 3011402 494 26.4 13.7 2.2 chr12 12828946 12828992 (121022903) + MamGypLTR1a LTR/Gypsy 730 776 (8) 3011402 664 21.9 9.1 7.3 chr12 12840059 12840290 (121011605) + LTR81B LTR/Gypsy 62 297 (1096) 3011422 242 36.7 4.3 3.7 chr12 13492410 13492596 (120359299) + LTR81C LTR/Gypsy 224 411 (742) 3012524 483 17.8 3.7 10.4 chr12 13492946 13493108 (120358787) + LTR81A LTR/Gypsy 1085 1236 (114) 3012525 567 28.4 4.7 5.1 chr12 13926928 13927142 (119924753) + MamGypLTR3 LTR/Gypsy 596 809 (30) 3013066 412 33.6 11.2 3.7 chr12 14325831 14326007 (119525888) + MamGypLTR1a LTR/Gypsy 442 633 (151) 3013633 412 33.6 11.2 3.7 chr12 14326318 14326408 (119525487) + MamGypLTR1a LTR/Gypsy 634 730 (54) 3013633 538 26.0 5.2 0.6 chr12 14340811 14340984 (119510911) + LTR81B LTR/Gypsy 109 290 (1103) 3013666 232 35.8 1.2 0.0 chr12 14355457 14355537 (119496358) C MamGypLTR1c LTR/Gypsy (208) 595 514 3013692 330 23.5 9.8 2.5 chr12 14355565 14355686 (119496209) C MamGypLTR1c LTR/Gypsy (359) 444 314 3013692 459 31.7 4.9 1.2 chr12 14726361 14726523 (119125372) C MamGypLTR2c LTR/Gypsy (575) 493 325 3014318 389 29.5 9.9 5.9 chr12 15298562 15298885 (118553010) + MamGypLTR2b LTR/Gypsy 579 915 (7) 3015095 453 33.0 8.0 2.7 chr12 15406877 15407100 (118444795) + MamGypLTR1b LTR/Gypsy 131 366 (418) 3015237 600 29.7 10.1 4.3 chr12 15407150 15407406 (118444489) + MamGypLTR1b LTR/Gypsy 473 744 (38) 3015237 554 22.2 16.7 2.3 chr12 16283752 16283972 (117567923) C LTR81B LTR/Gypsy (6) 1387 1135 3016491 460 30.8 4.9 8.2 chr12 16285316 16285643 (117566252) C LTR81B LTR/Gypsy (904) 489 163 3016495 402 20.0 5.0 10.7 chr12 16565347 16565455 (117286440) + LTR81A LTR/Gypsy 82 187 (1163) 3016908 402 20.0 5.0 10.7 chr12 16565806 16565835 (117286060) + LTR81A LTR/Gypsy 188 213 (1137) 3016908 393 34.8 8.2 2.7 chr12 16590329 16590585 (117261310) C MamGypLTR1a LTR/Gypsy (325) 459 189 3016947 406 36.1 13.2 4.3 chr12 17009103 17009815 (116842080) C MamGypLTR2b LTR/Gypsy (16) 906 131 3017462 291 30.4 3.1 2.3 chr12 17227380 17227507 (116624388) + MamGypLTR2c LTR/Gypsy 807 935 (133) 3017716 349 37.2 4.1 1.6 chr12 17527813 17528006 (116323889) + MamGypLTR1b LTR/Gypsy 386 584 (198) 3018098 231 32.2 0.0 2.2 chr12 17659798 17659886 (116192009) + LTR81C LTR/Gypsy 1 87 (1066) 3018256 308 22.0 14.1 2.5 chr12 18531234 18531354 (115320541) C LTR81 LTR/Gypsy (84) 1105 971 3019278 311 26.8 6.0 5.3 chr12 18581583 18581732 (115270163) + MamGypLTR3 LTR/Gypsy 79 229 (610) 3019335 374 25.2 7.6 3.0 chr12 19054684 19054814 (114797081) + MamGypLTR1a LTR/Gypsy 1 137 (647) 3019943 258 37.0 12.3 0.0 chr12 19054939 19055092 (114796803) + MamGypLTR1a LTR/Gypsy 339 511 (271) 3019944 390 26.5 2.0 0.0 chr12 19055371 19055468 (114796427) + MamGypLTR1a LTR/Gypsy 659 758 (26) 3019944 336 32.0 9.6 2.8 chr12 19061903 19062079 (114789816) C MamGypLTR3 LTR/Gypsy (51) 788 600 3019954 277 29.7 8.3 4.8 chr12 19183122 19183266 (114668629) + MamGypLTR2b LTR/Gypsy 167 316 (606) 3020123 350 28.7 4.5 3.2 chr12 19225839 19225993 (114625902) + MamGypLTR1c LTR/Gypsy 636 792 (11) 3020180 242 30.0 4.0 3.2 chr12 19695866 19695989 (114155906) + MamGypLTR1b LTR/Gypsy 655 779 (3) 3021082 306 36.0 0.9 0.0 chr12 19810802 19810915 (114040980) C LTR81C LTR/Gypsy (563) 590 476 3021263 263 29.5 1.0 4.0 chr12 19893385 19893483 (113958412) C MamGypLTR1b LTR/Gypsy (34) 748 653 3021370 411 27.9 6.7 4.4 chr12 20005269 20005493 (113846402) C MamGypLTR2b LTR/Gypsy (10) 912 683 3021526 225 31.7 9.0 9.0 chr12 20125274 20125495 (113726400) C MamGypLTR1d LTR/Gypsy (61) 742 521 3021693 264 29.2 5.6 13.7 chr12 20126127 20126396 (113725499) C MamGypLTR1d LTR/Gypsy (402) 411 164 3021693 240 27.6 3.6 6.2 chr12 20126442 20126553 (113725342) C MamGypLTR1d LTR/Gypsy (23) 790 682 3021696 247 23.1 1.9 0.0 chr12 20576679 20576730 (113275165) + LTR81 LTR/Gypsy 496 548 (641) 3022300 410 30.9 10.2 2.6 chr12 20864736 20864961 (112986934) C MamGypLTR1c LTR/Gypsy (2) 801 559 3022660 232 37.0 2.9 3.6 chr12 22146227 22146366 (111705529) C LTR81C LTR/Gypsy (408) 745 607 3024138 532 34.9 3.1 1.2 chr12 22147433 22147649 (111704246) C MamGypLTR2c LTR/Gypsy (583) 485 115 3024143 231 33.3 3.5 3.5 chr12 22148293 22148435 (111703460) + LTR81A LTR/Gypsy 208 350 (1000) 3024144 272 30.8 0.2 0.5 chr12 22189429 22189508 (111662387) C MamGypLTR1a LTR/Gypsy (389) 414 315 3024214 303 29.7 11.5 7.4 chr12 22312279 22312509 (111539386) C LTR81B LTR/Gypsy (912) 438 198 3024369 332 22.8 14.0 4.9 chr12 22312804 22312989 (111538906) C LTR81B LTR/Gypsy (1188) 205 4 3024369 344 28.8 5.7 4.0 chr12 22373451 22373627 (111478268) C MamGypLTR2c LTR/Gypsy (16) 1052 873 3024464 352 35.8 9.8 4.2 chr12 22373688 22374043 (111477852) C LTR81C LTR/Gypsy (346) 807 432 3024465 232 19.6 5.4 0.0 chr12 22548435 22548490 (111303405) C LTR81A LTR/Gypsy (1086) 264 206 3024716 886 31.7 7.9 5.6 chr12 22596209 22596776 (111255119) + MamGypLTR3 LTR/Gypsy 246 826 (13) 3024776 299 16.7 0.0 4.8 chr12 23043811 23043873 (110808022) C MamGypLTR1b LTR/Gypsy (4) 809 750 3025494 327 34.6 6.4 6.4 chr12 23045944 23046162 (110805733) C MamGypLTR1b LTR/Gypsy (216) 566 348 3025494 275 22.5 5.6 1.1 chr12 23076448 23076537 (110775358) + MamGypLTR1c LTR/Gypsy 704 797 (6) 3025535 747 32.0 16.8 3.9 chr12 23443883 23444441 (110407454) C MamGypLTR3 LTR/Gypsy (0) 839 209 3026034 239 26.1 8.4 6.7 chr12 23444779 23444897 (110406998) C MamGypLTR3 LTR/Gypsy (647) 192 72 3026034 318 33.9 3.5 1.8 chr12 24352107 24352220 (109499675) + MamGypLTR2b LTR/Gypsy 533 648 (274) 3027159 280 33.6 0.7 4.6 chr12 24457892 24458044 (109393851) + MamGypLTR1d LTR/Gypsy 564 710 (93) 3027304 288 24.4 0.0 0.0 chr12 24458100 24458177 (109393718) + MamGypLTR1d LTR/Gypsy 726 803 (10) 3027304 291 25.0 7.3 0.0 chr12 24526831 24526926 (109324969) + LTR81AB LTR/Gypsy 129 231 (47) 3027409 458 31.1 13.2 3.3 chr12 24878906 24879208 (108972687) + MamGypLTR1d LTR/Gypsy 470 802 (11) 3027862 239 26.3 13.9 0.9 chr12 26262818 26262932 (107588963) + MamGypLTR1b LTR/Gypsy 1 130 (673) 3030053 372 27.4 7.2 2.2 chr12 26263604 26263741 (107588154) + MamGypLTR1b LTR/Gypsy 624 768 (14) 3030053 375 22.2 6.7 6.0 chr12 26304671 26304804 (107547091) C LTR81B LTR/Gypsy (0) 1393 1259 3030112 1464 29.3 8.8 3.5 chr12 26322248 26322849 (107529046) + LTR81B LTR/Gypsy 3 636 (757) 3030140 369 25.9 2.1 10.3 chr12 26322985 26323178 (107528717) + LTR81B LTR/Gypsy 1200 1377 (16) 3030140 797 29.1 12.6 5.4 chr12 26435775 26436070 (107415825) + LTR81 LTR/Gypsy 728 1044 (145) 3030272 797 29.1 12.6 5.4 chr12 26436238 26436369 (107415526) + LTR81 LTR/Gypsy 1045 1187 (2) 3030272 358 24.1 3.3 4.1 chr12 26603949 26604069 (107247826) + LTR81A LTR/Gypsy 68 187 (1163) 3030501 265 23.4 8.1 5.0 chr12 27005663 27005761 (106846134) + LTR81B LTR/Gypsy 169 270 (1080) 3031093 414 27.4 16.4 6.4 chr12 27006603 27006992 (106844903) + LTR81B LTR/Gypsy 958 1386 (7) 3031093 425 28.9 6.1 9.6 chr12 27026816 27027095 (106824800) + MamGypLTR1c LTR/Gypsy 534 803 (0) 3031133 397 27.1 5.4 8.3 chr12 28162341 28162511 (105689384) + MamGypLTR1c LTR/Gypsy 558 729 (74) 3032934 397 27.1 5.4 8.3 chr12 28162811 28162879 (105689016) + MamGypLTR1c LTR/Gypsy 730 791 (12) 3032934 232 26.3 2.9 4.8 chr12 28180031 28180134 (105671761) + MamGypLTR1d LTR/Gypsy 710 811 (2) 3032962 800 23.7 10.5 1.3 chr12 28191182 28191420 (105660475) + LTR81A LTR/Gypsy 5 265 (1085) 3032982 248 25.8 0.2 5.5 chr12 28191933 28192038 (105659857) + LTR81A LTR/Gypsy 1240 1357 (36) 3032982 364 32.5 14.8 5.6 chr12 28233301 28233399 (105618496) C LTR81 LTR/Gypsy (762) 427 309 3033030 364 32.5 14.8 5.6 chr12 28233798 28233984 (105617911) C LTR81 LTR/Gypsy (881) 308 123 3033030 364 32.5 14.8 5.6 chr12 28234523 28234625 (105617270) C LTR81 LTR/Gypsy (1067) 122 1 3033030 369 28.6 10.7 10.0 chr12 28793932 28794222 (105057673) + MamGypLTR3 LTR/Gypsy 544 836 (3) 3033786 237 25.9 6.3 5.1 chr12 28860650 28860766 (104991129) + MamGypLTR2b LTR/Gypsy 218 442 (340) 3033859 260 33.5 14.2 2.4 chr12 28860883 28861087 (104990808) + MamGypLTR2b LTR/Gypsy 508 736 (186) 3033859 269 30.4 4.7 1.6 chr12 28861104 28861230 (104990665) + MamGypLTR2b LTR/Gypsy 775 905 (17) 3033859 229 22.7 11.4 5.1 chr12 29002937 29003015 (104848880) C MamGypLTR3 LTR/Gypsy (99) 740 657 3034054 283 28.1 5.8 2.5 chr12 31396334 31396465 (102455430) + MamGypLTR1d LTR/Gypsy 591 753 (60) 3037270 326 19.1 0.0 6.0 chr12 31397088 31397154 (102454741) + MamGypLTR1d LTR/Gypsy 750 812 (1) 3037270 513 28.3 10.6 5.3 chr12 32913706 32913760 (100938135) + MamGypLTR1d LTR/Gypsy 1 46 (767) 3040374 513 28.7 10.2 5.3 chr12 32914063 32914304 (100937591) + MamGypLTR1d LTR/Gypsy 47 309 (494) 3040374 283 37.5 8.3 5.1 chr12 32914389 32914641 (100937254) + MamGypLTR1d LTR/Gypsy 430 690 (92) 3040374 234 31.0 0.0 1.2 chr12 33245913 33245997 (100605898) + MamGypLTR1d LTR/Gypsy 730 813 (0) 3040889 246 22.9 1.3 9.1 chr12 33481824 33481900 (100369995) + LTR81A LTR/Gypsy 206 276 (1074) 3041190 1046 30.8 14.6 6.1 chr12 33482048 33482989 (100368906) + LTR81C LTR/Gypsy 136 1362 (31) 3041192 275 29.3 8.8 8.2 chr12 33507554 33507724 (100344171) C MamGypLTR1c LTR/Gypsy (593) 210 39 3041217 319 38.3 4.8 0.0 chr12 33748453 33748661 (100103234) C MamGypLTR1d LTR/Gypsy (0) 813 595 3041492 263 32.9 3.7 2.5 chr12 33753541 33753702 (100098193) C MamGypLTR1c LTR/Gypsy (6) 797 634 3041501 244 38.1 1.7 2.9 chr12 38981158 38981330 (94870565) + LTR81C LTR/Gypsy 99 269 (884) 3043462 392 31.0 4.2 0.0 chr12 39319016 39319157 (94532738) + MamGypLTR2b LTR/Gypsy 772 919 (3) 3043904 603 35.1 10.1 6.4 chr12 39398291 39398991 (94452904) + MamGypLTR1b LTR/Gypsy 14 740 (42) 3043982 894 33.7 5.6 0.7 chr12 39510662 39511088 (94340807) C LTR81 LTR/Gypsy (512) 677 224 3044138 377 29.7 12.9 4.2 chr12 40603462 40604151 (93247744) C MamGypLTR1b LTR/Gypsy (1) 812 14 3045610 273 27.3 7.2 5.2 chr12 41023219 41023411 (92828484) + MamGypLTR2c LTR/Gypsy 843 1039 (29) 3046114 444 26.5 7.7 3.8 chr12 41562702 41562950 (92288945) C LTR81A LTR/Gypsy (32) 1318 879 3046872 364 29.1 3.1 5.2 chr12 41563634 41563855 (92288040) C LTR81A LTR/Gypsy (969) 381 163 3046872 612 29.3 0.0 7.9 chr12 41761900 41762114 (92089781) C MamGypLTR3 LTR/Gypsy (188) 651 454 3047126 466 24.5 9.9 7.9 chr12 42085685 42085768 (91766127) C MamGypLTR2b LTR/Gypsy (9) 913 833 3047534 466 24.5 9.9 7.9 chr12 42086143 42086310 (91765585) C MamGypLTR2b LTR/Gypsy (90) 832 656 3047534 358 29.3 7.2 5.9 chr12 42086863 42087098 (91764797) C MamGypLTR2b LTR/Gypsy (827) 241 3 3047534 439 27.3 1.1 0.5 chr12 42120944 42121093 (91730802) + MamGypLTR1b LTR/Gypsy 599 748 (36) 3047589 244 24.6 3.3 0.0 chr12 42170484 42170544 (91681351) C LTR81A LTR/Gypsy (644) 706 644 3047646 370 24.8 3.3 0.9 chr12 42170625 42170774 (91681121) C LTR81A LTR/Gypsy (1044) 306 150 3047646 681 31.3 8.6 0.9 chr12 42332745 42332976 (91518919) C MamGypLTR1c LTR/Gypsy (1) 802 553 3047880 606 28.1 9.9 4.8 chr12 42333050 42333442 (91518453) C MamGypLTR1c LTR/Gypsy (400) 413 1 3047880 539 29.3 10.9 7.9 chr12 42394389 42395275 (91456620) C MamGypLTR2c LTR/Gypsy (0) 1068 80 3047977 226 18.9 5.7 0.0 chr12 42414810 42414862 (91437033) + MamGypLTR1c LTR/Gypsy 1 56 (747) 3048025 548 28.2 8.4 6.2 chr12 42414926 42415103 (91436792) + MamGypLTR1b LTR/Gypsy 432 611 (171) 3048026 548 28.2 8.4 6.2 chr12 42416125 42416266 (91435629) + MamGypLTR1b LTR/Gypsy 612 759 (23) 3048026 668 27.1 21.9 2.9 chr12 43423171 43423585 (90428310) + LTR81B LTR/Gypsy 894 1387 (6) 3049650 412 28.6 1.6 2.5 chr12 43662685 43662806 (90189089) C MamGypLTR3 LTR/Gypsy (365) 474 354 3049959 963 28.9 19.5 6.8 chr12 44089873 44090568 (89761327) C MamGypLTR3 LTR/Gypsy (13) 826 43 3050514 286 25.2 9.7 4.2 chr12 44269806 44269923 (89581972) C LTR81 LTR/Gypsy (209) 980 876 3050804 433 34.5 7.2 0.5 chr12 44308744 44308938 (89542957) C MamGypLTR3 LTR/Gypsy (96) 743 536 3050869 317 34.0 4.9 4.4 chr12 44407824 44408048 (89443847) + MamGypLTR2c LTR/Gypsy 286 511 (557) 3051005 578 30.4 4.6 9.2 chr12 44522596 44522964 (89328931) C MamGypLTR3 LTR/Gypsy (7) 832 481 3051152 475 31.2 13.7 10.5 chr12 44615257 44615485 (89236410) C LTR81C LTR/Gypsy (33) 1120 913 3051274 475 31.2 13.7 10.5 chr12 44615781 44616119 (89235776) C LTR81C LTR/Gypsy (241) 912 534 3051274 286 21.3 2.5 7.4 chr12 44798629 44798709 (89053186) C MamGypLTR3 LTR/Gypsy (214) 625 549 3051511 296 24.1 8.9 5.7 chr12 45284349 45284471 (88567424) C MamGypLTR2b LTR/Gypsy (107) 815 689 3052150 400 29.3 3.5 7.3 chr12 45991270 45991544 (87860351) C MamGypLTR1a LTR/Gypsy (513) 271 16 3053132 334 22.7 3.4 4.0 chr12 46027817 46027948 (87823947) + MamGypLTR2b LTR/Gypsy 653 899 (23) 3053206 322 28.8 3.3 6.1 chr12 46038321 46038501 (87813394) + MamGypLTR2c LTR/Gypsy 11 186 (882) 3053224 255 32.1 2.7 6.2 chr12 46572266 46572411 (87279484) + MamGypLTR3 LTR/Gypsy 443 583 (256) 3054038 257 28.6 13.8 3.3 chr12 47104445 47104625 (86747270) + MamGypLTR2c LTR/Gypsy 680 879 (189) 3054702 265 35.2 0.0 1.1 chr12 47320080 47320161 (86531734) + MamGypLTR1c LTR/Gypsy 485 565 (248) 3054942 437 32.2 6.7 0.0 chr12 47320759 47320907 (86530988) + MamGypLTR1c LTR/Gypsy 622 780 (23) 3054942 240 27.0 11.2 4.3 chr12 47394465 47394580 (86457315) C LTR81AB LTR/Gypsy (198) 955 832 3055041 354 24.1 13.7 3.2 chr12 47395228 47395385 (86456510) C LTR81AB LTR/Gypsy (1039) 311 133 3055041 419 23.9 6.1 0.9 chr12 47397760 47397873 (86454022) C LTR81AB LTR/Gypsy (158) 120 1 3055041 463 27.2 13.5 1.5 chr12 47861910 47862179 (85989716) + LTR81B LTR/Gypsy 855 1368 (25) 3055813 388 30.1 12.4 5.0 chr12 47960952 47961234 (85890661) C MamGypLTR1d LTR/Gypsy (9) 804 501 3055941 402 28.4 11.9 4.7 chr12 47961302 47961537 (85890358) C MamGypLTR1d LTR/Gypsy (398) 415 163 3055941 435 27.5 12.8 2.5 chr12 48011215 48011449 (85840446) C MamGypLTR1c LTR/Gypsy (0) 803 545 3056026 650 30.0 9.3 4.7 chr12 48011541 48011925 (85839970) C MamGypLTR1c LTR/Gypsy (400) 403 1 3056026 708 31.3 11.6 3.8 chr12 48345717 48346170 (85505725) + MamGypLTR1b LTR/Gypsy 315 807 (6) 3056508 377 32.6 6.8 3.2 chr12 48934300 48934610 (84917285) + MamGypLTR2b LTR/Gypsy 535 856 (66) 3057286 316 19.0 0.0 8.1 chr12 50134351 50134381 (83717514) + MamGypLTR1d LTR/Gypsy 728 757 (56) 3059557 316 19.0 0.0 8.1 chr12 50134679 50134732 (83717163) + MamGypLTR1d LTR/Gypsy 758 806 (7) 3059557 686 27.5 6.2 4.3 chr12 51030230 51030438 (82821457) C MamGypLTR3 LTR/Gypsy (79) 760 548 3061451 529 35.5 3.2 1.3 chr12 51030510 51030820 (82821075) C MamGypLTR3 LTR/Gypsy (403) 436 120 3061451 680 31.1 3.7 0.9 chr12 51793862 51794075 (82057820) + MamGyp-int LTR/Gypsy 1952 2171 (2891) 3062985 608 26.1 9.7 0.7 chr12 51797011 51797164 (82054731) + MamGyp-int LTR/Gypsy 4443 4610 (452) 3062985 413 30.3 16.6 0.0 chr12 51797776 51797920 (82053975) + MamGyp-int LTR/Gypsy 4567 4735 (327) 3062985 1249 30.2 6.3 5.6 chr12 57315044 57315601 (76536294) C MamGypLTR1d LTR/Gypsy (249) 564 3 3071716 365 25.2 8.9 0.8 chr12 58487966 58488089 (75363806) + LTR81A LTR/Gypsy 1217 1350 (0) 3073428 2030 30.3 6.4 2.9 chr12 58566928 58567924 (75283971) C LTR81C LTR/Gypsy (20) 1133 102 3073546 288 24.2 0.0 0.0 chr12 59037845 59037906 (74813989) + MamGypLTR1d LTR/Gypsy 751 812 (1) 3074191 466 31.6 8.1 4.0 chr12 59066590 59066836 (74785059) C MamGypLTR1b LTR/Gypsy (523) 259 3 3074241 362 25.0 15.8 3.8 chr12 59128061 59128193 (74723702) C MamGypLTR3 LTR/Gypsy (34) 805 657 3074319 359 37.3 2.6 1.3 chr12 59507274 59507425 (74344470) + MamGypLTR1c LTR/Gypsy 498 651 (152) 3074804 418 23.4 4.0 9.3 chr12 59508903 59509053 (74342842) C MamGypLTR1a LTR/Gypsy (641) 143 1 3074809 226 27.4 9.7 4.5 chr12 59713190 59713365 (74138530) C LTR81A LTR/Gypsy (1165) 185 1 3075082 226 38.9 6.9 3.0 chr12 60755408 60755640 (73096255) + MamGypLTR3 LTR/Gypsy 580 821 (18) 3076386 540 24.2 14.3 3.4 chr12 60871923 60872131 (72979764) C MamGypLTR2b LTR/Gypsy (15) 907 676 3076551 366 25.0 5.5 8.5 chr12 61709716 61709951 (72141944) C MamGypLTR2c LTR/Gypsy (28) 894 666 3077580 393 35.2 2.1 4.8 chr12 61710281 61710468 (72141427) C MamGypLTR2c LTR/Gypsy (573) 495 313 3077580 243 21.6 5.8 8.8 chr12 61723115 61723251 (72128644) C MamGypLTR2b LTR/Gypsy (49) 873 741 3077587 278 32.4 3.6 12.1 chr12 61975138 61975467 (71876428) C MamGypLTR1a LTR/Gypsy (480) 304 3 3077946 548 24.4 5.5 3.5 chr12 62323958 62324157 (71527738) + MamGypLTR2c LTR/Gypsy 836 1039 (29) 3078399 257 20.3 0.0 10.6 chr12 62509296 62509361 (71342534) C MamGypLTR1d LTR/Gypsy (13) 800 742 3078654 257 23.4 1.2 4.9 chr12 63533514 63533594 (70318301) + MamGypLTR1d LTR/Gypsy 1 78 (735) 3080231 268 32.4 13.2 4.8 chr12 63557342 63557568 (70294327) C MamGypLTR2c LTR/Gypsy (102) 966 721 3080266 253 37.2 2.1 6.2 chr12 63558480 63558517 (70293378) C MamGypLTR2c LTR/Gypsy (605) 317 286 3080266 253 37.2 2.1 6.2 chr12 63558957 63559109 (70292786) C MamGypLTR2c LTR/Gypsy (637) 285 134 3080266 233 26.7 9.3 1.9 chr12 63679757 63679863 (70172032) + MamGypLTR2c LTR/Gypsy 948 1062 (6) 3080406 562 32.3 2.7 3.4 chr12 63689778 63690072 (70161823) C MamGypLTR3 LTR/Gypsy (2) 837 545 3080418 369 28.0 2.5 9.3 chr12 63693816 63694051 (70157844) + LTR81B LTR/Gypsy 34 253 (1140) 3080426 251 27.1 5.8 10.4 chr12 63865409 63865581 (69986314) C LTR81B LTR/Gypsy (1215) 178 14 3080633 235 22.2 5.4 2.7 chr12 65407217 65407290 (68444605) C MamGypLTR1a LTR/Gypsy (708) 76 1 3083270 359 21.2 7.5 0.9 chr12 65956576 65956721 (67895174) + MamGypLTR2c LTR/Gypsy 910 1045 (23) 3084086 499 24.0 1.4 1.4 chr12 65958110 65958257 (67893638) C MamGypLTR1a LTR/Gypsy (10) 774 627 3084091 665 27.4 2.2 4.4 chr12 65958715 65958985 (67892910) C MamGypLTR1a LTR/Gypsy (519) 265 1 3084091 269 21.8 38.8 2.5 chr12 66037620 66037779 (67814116) + MamGypLTR1d LTR/Gypsy 1 218 (595) 3084219 243 26.8 18.6 0.8 chr12 66041320 66041443 (67810452) + MamGypLTR1d LTR/Gypsy 377 522 (262) 3084219 228 16.7 0.0 0.0 chr12 66070015 66070050 (67781845) + MamGypLTR1c LTR/Gypsy 548 583 (220) 3084265 788 31.4 8.2 6.5 chr12 66170016 66170489 (67681406) C MamGypLTR1b LTR/Gypsy (13) 769 288 3084424 570 33.9 11.2 3.9 chr12 66677867 66678588 (67173307) + MamGypLTR2b LTR/Gypsy 134 908 (14) 3085228 455 28.8 5.4 1.8 chr12 66749880 66750045 (67101850) + MamGypLTR3 LTR/Gypsy 659 830 (9) 3085377 233 24.8 9.6 1.7 chr12 67279578 67279692 (66572203) + MamGypLTR2c LTR/Gypsy 890 1013 (55) 3086124 541 33.0 13.4 2.5 chr12 67452785 67453503 (66398392) + LTR81C LTR/Gypsy 425 1339 (11) 3086412 720 31.5 6.6 9.0 chr12 67754327 67754686 (66097209) + LTR81C LTR/Gypsy 23 377 (776) 3086870 720 35.4 7.3 8.6 chr12 67755232 67755585 (66096310) + LTR81C LTR/Gypsy 378 723 (430) 3086870 613 28.9 14.1 7.9 chr12 67841873 67842240 (66009655) C MamGyp-int LTR/Gypsy (1119) 3943 3553 3087013 1962 32.8 7.7 3.9 chr12 67842269 67843393 (66008502) C MamGyp-int LTR/Gypsy (1620) 3442 2275 3087013 266 32.8 2.3 4.6 chr12 67843963 67844093 (66007802) C MamGyp-int LTR/Gypsy (3463) 1599 1472 3087013 779 33.5 2.2 4.0 chr12 67845031 67845353 (66006542) C MamGyp-int LTR/Gypsy (4114) 948 632 3087013 290 34.7 6.8 1.4 chr12 67851769 67851914 (65999981) C LTR81B LTR/Gypsy (1233) 160 7 3087023 237 20.2 7.8 6.7 chr12 67980572 67980661 (65871234) C MamGypLTR1a LTR/Gypsy (7) 777 687 3087195 569 31.4 12.8 1.1 chr12 67980946 67981319 (65870576) C MamGypLTR1a LTR/Gypsy (366) 418 1 3087197 252 27.4 3.0 8.2 chr12 67992385 67992519 (65859376) + MamGypLTR3 LTR/Gypsy 666 793 (46) 3087215 332 30.1 11.2 11.8 chr12 68397910 68398496 (65453399) C LTR81C LTR/Gypsy (24) 1129 546 3087783 429 30.4 3.7 8.7 chr12 68398671 68398911 (65452984) C LTR81C LTR/Gypsy (924) 229 1 3087783 516 30.5 8.9 3.5 chr12 68579172 68579302 (65272593) + MamGypLTR3 LTR/Gypsy 274 408 (431) 3088032 516 30.5 8.9 3.5 chr12 68579434 68579617 (65272278) + MamGypLTR3 LTR/Gypsy 409 606 (233) 3088032 248 37.2 5.2 7.1 chr12 68678830 68679075 (65172820) C MamGypLTR2b LTR/Gypsy (503) 419 173 3088177 248 37.2 5.2 7.1 chr12 68679275 68679392 (65172503) C MamGypLTR2b LTR/Gypsy (750) 172 62 3088177 780 31.1 8.0 3.1 chr12 68783723 68784074 (65067821) + MamGypLTR1c LTR/Gypsy 357 725 (78) 3088325 313 19.7 4.9 0.0 chr12 68784751 68784811 (65067084) + MamGypLTR1c LTR/Gypsy 718 781 (3) 3088325 360 28.1 3.9 8.9 chr12 69069232 69069411 (64782484) C MamGypLTR1a LTR/Gypsy (0) 784 614 3088864 227 24.6 19.6 4.7 chr12 69186594 69186828 (64665067) + LTR81B LTR/Gypsy 1118 1387 (6) 3089125 277 28.9 7.7 0.3 chr12 70376705 70376865 (63475030) + MamGypLTR1a LTR/Gypsy 328 500 (282) 3091169 584 28.4 10.8 2.6 chr12 70446504 70446854 (63405041) C LTR81 LTR/Gypsy (21) 1372 993 3091263 683 30.3 8.3 5.5 chr12 70447231 70447666 (63404229) C LTR81A LTR/Gypsy (794) 556 109 3091265 758 33.6 11.6 3.9 chr12 70448094 70448874 (63403021) C LTR81 LTR/Gypsy (368) 1025 186 3091263 338 33.3 7.3 5.5 chr12 71135883 71136155 (62715740) + MamGypLTR1c LTR/Gypsy 526 803 (0) 3092290 309 27.4 3.2 0.8 chr12 71392273 71392397 (62459498) C MamGypLTR1d LTR/Gypsy (3) 810 683 3092631 691 30.2 12.5 2.5 chr12 71625564 71625916 (62225979) C LTR81C LTR/Gypsy (159) 994 607 3092927 332 16.1 9.1 6.1 chr12 71629801 71629899 (62221996) C MamGypLTR1c LTR/Gypsy (0) 803 702 3092935 267 18.8 5.8 0.0 chr12 71631756 71631824 (62220071) C MamGypLTR1c LTR/Gypsy (590) 213 141 3092935 964 33.4 1.1 2.3 chr12 72231808 72232159 (61619736) C MamGypLTR1b LTR/Gypsy (71) 711 364 3093871 1009 31.7 12.8 3.0 chr12 72457721 72457776 (61394119) C MamGypLTR1b LTR/Gypsy (3) 779 726 3094202 1009 31.7 12.8 3.0 chr12 72460130 72460765 (61391130) C MamGypLTR1b LTR/Gypsy (57) 725 19 3094202 611 26.9 2.4 4.3 chr12 72531403 72531612 (61320283) + LTR81A LTR/Gypsy 18 223 (1127) 3094303 269 29.9 19.8 2.2 chr12 72619850 72620071 (61231824) + MamGypLTR1b LTR/Gypsy 484 744 (38) 3094423 297 28.3 9.9 7.0 chr12 73144832 73145002 (60706893) C LTR81 LTR/Gypsy (169) 1020 845 3095075 277 22.1 6.8 2.3 chr12 73147238 73147325 (60704570) C MamGypLTR2c LTR/Gypsy (13) 1055 964 3095079 459 30.1 3.6 6.8 chr12 73315760 73315980 (60535915) C LTR81A LTR/Gypsy (1127) 223 10 3095286 234 35.0 2.0 10.7 chr12 73420673 73420868 (60431027) + LTR81C LTR/Gypsy 344 519 (549) 3095407 355 32.7 12.8 7.0 chr12 73779085 73779482 (60072413) C MamGypLTR1c LTR/Gypsy (1) 802 382 3095810 548 37.3 11.4 3.0 chr12 74307648 74308307 (59543588) + MamGypLTR1c LTR/Gypsy 86 800 (3) 3096517 282 29.8 1.2 0.0 chr12 74906760 74906843 (58945052) + MamGypLTR2c LTR/Gypsy 22 106 (962) 3097274 266 34.2 0.8 7.5 chr12 75004244 75004363 (58847532) C MamGypLTR1b LTR/Gypsy (277) 505 394 3097416 435 32.4 7.0 2.6 chr12 75415129 75415356 (58436539) C MamGypLTR1b LTR/Gypsy (17) 765 528 3097948 290 35.5 4.7 6.0 chr12 75415857 75416003 (58435892) C MamGypLTR1b LTR/Gypsy (309) 473 331 3097948 290 35.2 5.2 5.4 chr12 75416360 75416427 (58435468) C MamGypLTR1b LTR/Gypsy (457) 346 268 3097948 267 24.7 3.9 0.0 chr12 75662450 75662526 (58189369) C MamGypLTR1b LTR/Gypsy (37) 745 666 3098277 380 31.6 2.9 5.0 chr12 75662940 75663079 (58188816) C MamGypLTR1b LTR/Gypsy (108) 674 538 3098277 267 30.4 6.4 7.6 chr12 75664977 75665147 (58186748) C MamGypLTR1b LTR/Gypsy (340) 442 274 3098277 472 33.6 2.9 4.9 chr12 76086147 76086390 (57765505) + MamGypLTR3 LTR/Gypsy 542 780 (59) 3098896 496 31.2 18.3 3.2 chr12 76177635 76178234 (57673661) C MamGypLTR1a LTR/Gypsy (12) 772 82 3099053 522 22.1 2.2 5.1 chr12 76596116 76596253 (57255642) C LTR81A LTR/Gypsy (1179) 171 38 3099780 250 25.3 0.0 10.2 chr12 77059757 77059844 (56792051) + LTR81C LTR/Gypsy 23 101 (1052) 3100566 284 20.8 2.6 1.3 chr12 77409251 77409328 (56442567) + MamGypLTR2b LTR/Gypsy 789 867 (55) 3101171 736 34.7 6.7 6.2 chr12 77595883 77596435 (56255460) + MamGypLTR3 LTR/Gypsy 50 605 (234) 3101448 466 35.0 12.4 3.7 chr12 77631548 77631820 (56220075) C LTR81A LTR/Gypsy (316) 1077 759 3101495 411 35.6 11.5 3.8 chr12 77702835 77703199 (56148696) + MamGypLTR3 LTR/Gypsy 379 771 (68) 3101588 691 34.6 5.3 4.0 chr12 77862877 77863327 (55988568) C MamGypLTR1a LTR/Gypsy (1) 783 327 3101785 578 31.0 16.2 4.3 chr12 77978645 77979133 (55872762) C MamGypLTR3 LTR/Gypsy (31) 808 262 3101939 225 24.1 10.2 1.7 chr12 78070240 78070298 (55781597) C LTR81A LTR/Gypsy (928) 422 359 3102061 704 32.0 6.1 5.8 chr12 78186000 78186207 (55665688) C MamGypLTR1c LTR/Gypsy (0) 803 594 3102214 704 32.0 6.1 5.8 chr12 78186628 78186813 (55665082) C MamGypLTR1c LTR/Gypsy (210) 593 408 3102214 253 32.7 19.9 8.0 chr12 78244459 78244794 (55607101) C MamGypLTR2c LTR/Gypsy (238) 915 540 3102288 266 37.7 4.2 1.7 chr12 78245011 78245318 (55606577) C MamGypLTR2c LTR/Gypsy (1008) 342 4 3102288 387 31.4 11.4 3.6 chr12 78327697 78327977 (55523918) C MamGypLTR2c LTR/Gypsy (11) 1057 755 3102421 563 24.3 3.2 1.9 chr12 78635239 78635393 (55216502) + LTR81A LTR/Gypsy 51 207 (1143) 3102831 444 30.6 4.0 1.3 chr12 79066110 79066258 (54785637) C MamGypLTR1a LTR/Gypsy (598) 186 34 3103390 597 30.0 11.5 2.2 chr12 79544530 79544798 (54307097) + MamGypLTR1a LTR/Gypsy 5 298 (486) 3104094 848 32.7 2.9 3.2 chr12 79544832 79545207 (54306688) + MamGypLTR1a LTR/Gypsy 409 783 (1) 3104094 435 22.1 7.8 0.2 chr12 80333794 80333929 (53517966) + MamGypLTR1a LTR/Gypsy 18 167 (615) 3105260 493 30.7 8.4 1.5 chr12 80334194 80334420 (53517475) + MamGypLTR1a LTR/Gypsy 254 493 (310) 3105260 293 34.8 4.3 3.9 chr12 80413979 80414208 (53437687) C MamGypLTR1c LTR/Gypsy (17) 786 556 3105396 305 19.0 1.1 7.7 chr12 80590147 80590237 (53261658) C LTR81B LTR/Gypsy (0) 1189 1105 3105626 261 28.5 16.2 4.3 chr12 80590253 80590505 (53261390) C LTR81B LTR/Gypsy (184) 969 687 3105626 557 25.8 14.3 4.9 chr12 80591559 80591928 (53259967) C LTR81B LTR/Gypsy (925) 425 1 3105626 426 28.9 7.6 3.5 chr12 80721243 80721439 (53130456) C MamGypLTR1a LTR/Gypsy (521) 263 59 3105803 292 23.1 1.3 19.3 chr12 80906478 80906627 (52945268) C MamGypLTR2c LTR/Gypsy (144) 924 802 3106041 235 35.3 10.4 5.2 chr12 80907644 80907855 (52944040) C MamGypLTR2c LTR/Gypsy (543) 525 303 3106043 315 23.7 15.2 2.0 chr12 80908049 80908147 (52943748) C LTR81A LTR/Gypsy (1028) 322 211 3106044 283 29.5 4.5 0.8 chr12 80908570 80908702 (52943193) C LTR81A LTR/Gypsy (1202) 148 11 3106044 627 33.0 1.5 1.0 chr12 80982402 80982603 (52869292) C MamGypLTR1a LTR/Gypsy (114) 670 468 3106155 364 26.6 11.3 0.0 chr12 80982694 80982817 (52869078) C MamGypLTR1a LTR/Gypsy (644) 140 3 3106155 327 40.4 11.0 0.0 chr12 81041281 81041597 (52810298) C MamGypLTR2c LTR/Gypsy (312) 756 405 3106245 268 30.7 2.9 0.8 chr12 81207734 81207888 (52644007) + MamGypLTR1d LTR/Gypsy 643 812 (1) 3106482 460 36.4 1.7 0.0 chr12 81929048 81929220 (51922675) + LTR81A LTR/Gypsy 777 952 (398) 3107529 455 28.2 18.4 2.1 chr12 82203700 82203938 (51647957) + LTR81AB LTR/Gypsy 1 278 (0) 3107886 318 26.5 1.0 3.9 chr12 82964544 82964645 (50887250) + LTR81A LTR/Gypsy 124 222 (1128) 3108952 388 33.1 12.2 6.3 chr12 82964727 82964946 (50886949) + MamGypLTR2c LTR/Gypsy 75 282 (786) 3108953 388 33.1 12.2 6.3 chr12 82965254 82965426 (50886469) + MamGypLTR2c LTR/Gypsy 283 490 (578) 3108953 397 30.4 4.5 4.5 chr12 83003185 83003360 (50848535) + MamGypLTR1b LTR/Gypsy 5 180 (602) 3109007 268 27.8 8.7 3.6 chr12 83063922 83064059 (50787836) + MamGypLTR1b LTR/Gypsy 19 163 (619) 3109077 235 29.9 15.6 0.8 chr12 83135540 83135667 (50716228) C LTR81 LTR/Gypsy (263) 926 780 3109174 244 36.5 2.4 5.9 chr12 83417360 83417528 (50434367) C MamGypLTR1b LTR/Gypsy (277) 505 343 3109592 242 34.6 9.8 2.7 chr12 83550453 83550636 (50301259) + MamGypLTR1a LTR/Gypsy 354 550 (234) 3109755 264 30.9 1.1 0.0 chr12 83740747 83740840 (50111055) + MamGypLTR2c LTR/Gypsy 23 117 (951) 3110004 472 31.6 2.8 0.6 chr12 83741840 83742017 (50109878) + MamGypLTR2c LTR/Gypsy 808 989 (79) 3110004 712 36.1 6.5 3.8 chr12 83756782 83757256 (50094639) C MamGypLTR1b LTR/Gypsy (294) 488 1 3110028 891 37.2 3.2 4.3 chr12 83871427 83871887 (49980008) + MamGyp-int LTR/Gypsy 1686 2141 (2921) 3110162 365 31.0 2.8 2.8 chr12 83923742 83923920 (49927975) C LTR81A LTR/Gypsy (1161) 189 11 3110231 443 36.9 10.4 2.9 chr12 83963223 83963643 (49888252) + MamGypLTR2c LTR/Gypsy 345 797 (271) 3110272 244 33.9 4.8 3.2 chr12 84365107 84365231 (49486664) C MamGypLTR1b LTR/Gypsy (36) 746 620 3110761 233 35.2 9.9 8.0 chr12 85070119 85070420 (48781475) C MamGypLTR1b LTR/Gypsy (254) 528 221 3111667 320 30.9 2.8 3.5 chr12 85078071 85078121 (48773774) C MamGypLTR1d LTR/Gypsy (0) 813 766 3111680 320 30.9 2.8 3.5 chr12 85078421 85078512 (48773383) C MamGypLTR1d LTR/Gypsy (48) 765 671 3111680 388 35.0 2.4 0.6 chr12 85144232 85144395 (48707500) C MamGypLTR3 LTR/Gypsy (305) 534 368 3111790 259 28.2 3.6 4.4 chr12 85203033 85203169 (48648726) + MamGypLTR1b LTR/Gypsy 640 775 (7) 3111885 330 36.3 1.5 4.9 chr12 85314449 85314770 (48537125) C MamGypLTR1c LTR/Gypsy (61) 752 457 3112043 276 26.6 7.6 5.0 chr12 85403442 85403560 (48448335) + MamGypLTR1b LTR/Gypsy 661 782 (0) 3112179 344 27.8 6.5 13.2 chr12 85419909 85420310 (48431585) + MamGypLTR1b LTR/Gypsy 28 408 (395) 3112202 455 33.9 10.8 2.5 chr12 85420571 85420861 (48431034) + MamGypLTR1b LTR/Gypsy 483 782 (0) 3112202 313 29.8 4.5 0.8 chr12 86494422 86494553 (47357342) C MamGypLTR2b LTR/Gypsy (16) 906 770 3113686 560 35.7 8.9 3.9 chr12 87127148 87127201 (46724694) + MamGypLTR2b LTR/Gypsy 349 393 (529) 3114549 560 35.7 8.9 3.9 chr12 87127231 87127633 (46724262) + MamGypLTR2b LTR/Gypsy 394 829 (93) 3114549 323 30.8 1.2 3.1 chr12 87184268 87184428 (46667467) + LTR81A LTR/Gypsy 193 350 (1043) 3114637 672 34.7 17.7 5.0 chr12 87184727 87185347 (46666548) + LTR81A LTR/Gypsy 628 1327 (23) 3114637 334 31.6 7.8 5.8 chr12 87185385 87185772 (46666123) + MamGypLTR1b LTR/Gypsy 36 426 (377) 3114639 225 28.8 1.7 0.0 chr12 87377319 87377377 (46474518) + MamGypLTR1c LTR/Gypsy 126 185 (618) 3114875 254 39.4 7.6 0.6 chr12 87743573 87743743 (46108152) C MamGyp-int LTR/Gypsy (3782) 1280 1098 3115374 305 39.9 3.9 4.6 chr12 87746017 87746321 (46105574) C MamGypLTR1b LTR/Gypsy (101) 681 379 3115378 230 34.9 1.7 7.6 chr12 88206434 88206551 (45645344) C LTR81B LTR/Gypsy (886) 507 397 3115956 483 18.8 5.0 5.7 chr12 88206760 88206900 (45644995) C LTR81B LTR/Gypsy (1248) 145 6 3115957 583 36.0 6.3 4.0 chr12 88251187 88251632 (45600263) + LTR81C LTR/Gypsy 127 582 (571) 3116007 649 33.2 6.5 2.2 chr12 88251716 88252082 (45599813) + LTR81C LTR/Gypsy 832 1349 (1) 3116007 440 24.2 0.0 0.0 chr12 88281412 88281510 (45570385) + MamGypLTR1b LTR/Gypsy 674 772 (10) 3116043 293 25.0 0.0 12.1 chr12 88374902 88375033 (45476862) C MamGypLTR2b LTR/Gypsy (134) 788 673 3116165 348 27.6 10.6 6.0 chr12 88653088 88653322 (45198573) C LTR81B LTR/Gypsy (1072) 321 76 3116538 716 35.3 6.9 4.6 chr12 88767465 88767688 (45084207) C MamGypLTR1b LTR/Gypsy (13) 769 539 3116708 716 35.3 6.9 4.6 chr12 88767821 88768031 (45083864) C MamGypLTR1b LTR/Gypsy (244) 538 324 3116708 257 30.5 4.5 3.0 chr12 88823883 88824014 (45027881) C MamGypLTR2c LTR/Gypsy (124) 944 811 3116773 250 31.4 0.0 1.1 chr12 88824544 88824630 (45027265) C MamGypLTR2c LTR/Gypsy (566) 502 417 3116773 493 26.7 4.0 3.3 chr12 89123522 89123672 (44728223) + MamGypLTR2c LTR/Gypsy 837 988 (80) 3117180 436 23.0 10.1 3.8 chr12 89149905 89150062 (44701833) C MamGypLTR1a LTR/Gypsy (613) 171 4 3117222 286 25.0 6.6 8.2 chr12 89355754 89355875 (44496020) C MamGypLTR2c LTR/Gypsy (81) 987 868 3117493 329 33.7 11.2 3.1 chr12 89498003 89498262 (44353633) + MamGypLTR2c LTR/Gypsy 221 501 (567) 3117733 586 27.9 13.5 4.3 chr12 89707839 89708141 (44143754) + LTR81B LTR/Gypsy 146 476 (917) 3118070 440 24.0 10.0 3.4 chr12 89708727 89709008 (44142887) + LTR81B LTR/Gypsy 873 1393 (0) 3118070 239 26.8 13.2 6.6 chr12 90417482 90417633 (43434262) + MamGypLTR2c LTR/Gypsy 701 862 (206) 3119169 422 27.3 11.3 1.4 chr12 90567286 90567426 (43284469) C MamGypLTR1b LTR/Gypsy (626) 156 2 3119397 375 30.8 3.7 3.3 chr12 90889798 90889978 (42961917) C LTR81A LTR/Gypsy (193) 1200 877 3119865 476 32.0 2.0 1.3 chr12 90891808 90891956 (42959939) C LTR81A LTR/Gypsy (397) 953 804 3119865 309 30.3 1.1 3.3 chr12 90891994 90892085 (42959810) C LTR81A LTR/Gypsy (646) 543 454 3119865 756 28.7 2.5 5.4 chr12 90892333 90892649 (42959246) C LTR81A LTR/Gypsy (1006) 344 37 3119865 304 35.1 2.6 2.0 chr12 91192942 91193092 (42658803) + MamGypLTR3 LTR/Gypsy 647 798 (41) 3120278 330 30.8 9.0 2.8 chr12 91623343 91623519 (42228376) + MamGypLTR1b LTR/Gypsy 595 782 (0) 3120891 1384 35.3 1.6 3.0 chr12 91751709 91752379 (42099516) + MamGyp-int LTR/Gypsy 2258 2919 (2143) 3121052 329 22.4 0.0 1.2 chr12 91963506 91963591 (41888304) C MamGypLTR1d LTR/Gypsy (0) 813 729 3121350 447 35.5 3.1 7.1 chr12 91965752 91966075 (41885820) C MamGypLTR1c LTR/Gypsy (0) 803 493 3121357 402 27.6 0.7 3.3 chr12 92323771 92323920 (41527975) + MamGypLTR2c LTR/Gypsy 904 1049 (19) 3121855 247 23.2 7.7 4.3 chr12 92454706 92454822 (41397073) C LTR81B LTR/Gypsy (57) 1336 1216 3122066 733 26.9 3.0 5.4 chr12 92610825 92611204 (41240691) + LTR81B LTR/Gypsy 29 397 (996) 3122362 894 36.5 4.0 8.7 chr12 92611593 92611777 (41240118) + LTR81B LTR/Gypsy 439 608 (785) 3122362 1090 35.4 5.4 4.0 chr12 92612147 92612864 (41239031) + LTR81C LTR/Gypsy 383 1110 (43) 3122365 269 34.7 9.0 4.7 chr12 92876084 92876361 (40975534) + MamGypLTR3 LTR/Gypsy 439 728 (111) 3122785 249 26.2 5.8 1.0 chr12 94342119 94342222 (39509673) C MamGypLTR1b LTR/Gypsy (11) 771 663 3125517 492 32.9 6.7 5.3 chr12 94422368 94422794 (39429101) + MamGypLTR2c LTR/Gypsy 3 354 (714) 3125642 543 23.9 8.6 4.0 chr12 95137879 95138052 (38713843) + LTR81B LTR/Gypsy 1212 1393 (0) 3126847 241 31.2 4.9 2.4 chr12 95795770 95795851 (38056044) + MamGypLTR2c LTR/Gypsy 226 309 (759) 3128202 431 24.6 2.5 2.2 chr12 96542809 96542935 (37308960) C MamGypLTR1b LTR/Gypsy (12) 791 662 3129558 486 27.3 9.2 3.8 chr12 96544556 96544795 (37307100) C MamGypLTR1b LTR/Gypsy (527) 255 3 3129558 347 30.6 6.1 2.4 chr12 96556895 96557058 (37294837) C MamGypLTR1d LTR/Gypsy (611) 202 33 3129586 231 33.3 1.0 4.0 chr12 96563607 96563706 (37288189) + LTR81A LTR/Gypsy 679 775 (618) 3129594 441 25.1 7.0 11.2 chr12 96563879 96564165 (37287730) + LTR81A LTR/Gypsy 1029 1303 (47) 3129594 341 28.8 3.1 7.8 chr12 97011166 97011293 (36840602) C MamGypLTR3 LTR/Gypsy (142) 697 576 3130392 350 34.6 12.6 1.8 chr12 97043876 97044160 (36807735) C MamGypLTR1c LTR/Gypsy (0) 803 488 3130442 309 25.8 4.9 5.5 chr12 97542832 97542995 (36308900) C MamGypLTR3 LTR/Gypsy (132) 707 545 3131191 300 30.6 2.4 1.6 chr12 97706203 97706325 (36145570) C MamGypLTR1c LTR/Gypsy (6) 797 674 3131450 745 32.7 5.1 3.5 chr12 97765833 97766260 (36085635) + LTR81B LTR/Gypsy 544 978 (415) 3131543 243 18.3 2.4 13.4 chr12 97767759 97767840 (36084055) + LTR81B LTR/Gypsy 974 1046 (347) 3131543 245 25.5 13.1 11.3 chr12 97767952 97768119 (36083776) + LTR81B LTR/Gypsy 1205 1375 (18) 3131543 526 33.7 1.9 4.3 chr12 98052026 98052233 (35799662) C MamGypLTR3 LTR/Gypsy (515) 324 122 3131930 407 28.2 10.7 6.1 chr12 98494161 98494421 (35357474) C MamGypLTR3 LTR/Gypsy (0) 839 567 3132587 356 24.6 5.6 0.0 chr12 98635147 98635272 (35216623) + MamGypLTR1c LTR/Gypsy 671 803 (0) 3132793 374 32.2 13.1 2.2 chr12 98635358 98635624 (35216271) + MamGyp-int LTR/Gypsy 148 443 (4619) 3132794 258 28.9 3.3 0.0 chr12 98870366 98870455 (34981440) + MamGypLTR2b LTR/Gypsy 750 842 (80) 3133198 225 24.7 2.5 3.8 chr12 99530225 99530304 (34321591) + MamGypLTR1d LTR/Gypsy 724 802 (11) 3134330 252 30.4 5.1 2.5 chr12 99784003 99784120 (34067775) + LTR81AB LTR/Gypsy 1 121 (157) 3134682 271 24.7 2.4 2.4 chr12 99982626 99982708 (33869187) + LTR81AB LTR/Gypsy 3 85 (193) 3134937 443 21.1 13.0 3.7 chr12 100764500 100764661 (33087234) C MamGypLTR1c LTR/Gypsy (612) 191 15 3136241 317 27.2 20.9 5.6 chr12 100768038 100768107 (33083788) C MamGypLTR1b LTR/Gypsy (15) 767 707 3136250 317 27.2 20.9 5.6 chr12 100768415 100768592 (33083303) C MamGypLTR1b LTR/Gypsy (76) 706 481 3136250 398 35.0 14.1 0.5 chr12 100852722 100852972 (32998923) C MamGypLTR1a LTR/Gypsy (229) 553 266 3136439 236 32.3 8.7 7.5 chr12 100913409 100913662 (32938233) C MamGypLTR2c LTR/Gypsy (656) 412 156 3136572 352 28.8 4.3 0.7 chr12 100920235 100920374 (32931521) C MamGypLTR1b LTR/Gypsy (37) 745 601 3136582 390 28.2 16.2 7.7 chr12 101320423 101320656 (32531239) + MamGypLTR1b LTR/Gypsy 22 275 (507) 3137217 735 32.5 1.8 5.0 chr12 101320867 101321148 (32530747) + MamGypLTR1b LTR/Gypsy 504 776 (6) 3137217 330 27.5 11.4 6.4 chr12 102082944 102083145 (31768750) C MamGypLTR1b LTR/Gypsy (49) 733 522 3138562 321 25.7 2.9 0.0 chr12 102344830 102344934 (31506961) C LTR81B LTR/Gypsy (16) 1377 1270 3139123 270 28.0 6.4 5.7 chr12 102663456 102663595 (31188300) + MamGypLTR1c LTR/Gypsy 172 312 (491) 3139588 345 31.1 0.8 3.2 chr12 102664108 102664233 (31187662) + MamGypLTR1c LTR/Gypsy 456 578 (225) 3139588 232 30.6 1.3 4.0 chr12 102664305 102664379 (31187516) + MamGypLTR2b LTR/Gypsy 636 708 (214) 3139591 322 30.5 8.8 7.7 chr12 102715358 102715397 (31136498) C LTR81C LTR/Gypsy (918) 235 198 3139647 322 30.5 8.8 7.7 chr12 102715621 102715760 (31136135) C LTR81C LTR/Gypsy (956) 197 53 3139647 445 37.8 8.0 1.1 chr12 102757626 102757986 (31093909) C MamGypLTR2c LTR/Gypsy (622) 446 61 3139708 356 21.1 0.0 1.3 chr12 102771176 102771252 (31080643) + LTR81A LTR/Gypsy 71 146 (1204) 3139729 457 26.4 8.2 9.0 chr12 102956729 102957095 (30894800) + MamGypLTR1c LTR/Gypsy 43 406 (397) 3139999 320 29.8 9.0 9.0 chr12 103185024 103185358 (30666537) + LTR81B LTR/Gypsy 4 338 (1055) 3140376 437 28.0 13.7 5.7 chr12 103186400 103186753 (30665142) + LTR81B LTR/Gypsy 987 1392 (1) 3140376 259 20.0 5.3 6.7 chr12 103382699 103382773 (30469122) + MamGypLTR1c LTR/Gypsy 75 148 (655) 3140688 245 19.8 9.0 3.4 chr12 103781735 103781823 (30070072) C MamGypLTR2c LTR/Gypsy (112) 956 863 3141295 296 25.3 5.0 5.9 chr12 103931020 103931120 (29920775) + MamGypLTR3 LTR/Gypsy 137 236 (603) 3141502 227 29.8 8.4 5.3 chr12 103931355 103931485 (29920410) + MamGypLTR3 LTR/Gypsy 352 486 (353) 3141502 375 31.4 19.1 0.9 chr12 103931501 103931725 (29920170) + MamGypLTR3 LTR/Gypsy 552 817 (22) 3141502 359 31.7 7.1 3.3 chr12 103968981 103969192 (29882703) C MamGypLTR3 LTR/Gypsy (0) 839 620 3141569 296 32.2 1.7 0.8 chr12 103969365 103969483 (29882412) C MamGypLTR3 LTR/Gypsy (454) 385 266 3141569 431 30.0 13.6 3.1 chr12 104285642 104286030 (29565865) + MamGypLTR2b LTR/Gypsy 493 922 (0) 3142136 302 26.8 20.8 4.7 chr12 104834075 104834223 (29017672) + LTR81AB LTR/Gypsy 71 243 (35) 3143205 340 26.0 5.9 5.9 chr12 104834681 104834797 (29017098) C LTR81 LTR/Gypsy (227) 962 843 3143207 340 26.0 5.9 5.9 chr12 104835322 104835338 (29016557) C LTR81 LTR/Gypsy (347) 842 828 3143207 346 31.5 12.9 6.3 chr12 104835423 104835754 (29016141) C LTR81 LTR/Gypsy (641) 548 195 3143207 369 29.5 11.5 3.3 chr12 104835870 104835935 (29015960) C LTR81AB LTR/Gypsy (15) 263 197 3143209 369 29.5 11.5 3.3 chr12 104836248 104836362 (29015533) C LTR81AB LTR/Gypsy (82) 196 68 3143209 391 27.8 7.5 0.4 chr12 104845742 104845960 (29005935) C MamGypLTR1a LTR/Gypsy (226) 587 324 3143231 282 22.9 11.6 6.2 chr12 104846045 104846156 (29005739) C MamGypLTR1a LTR/Gypsy (662) 120 3 3143231 345 23.5 4.8 1.9 chr12 105956650 105956753 (27895142) C MamGypLTR1b LTR/Gypsy (28) 754 648 3145149 287 33.7 11.4 2.3 chr12 106013234 106013409 (27838486) + MamGypLTR3 LTR/Gypsy 23 214 (625) 3145264 251 36.9 7.1 6.7 chr12 106361082 106361305 (27490590) + MamGypLTR3 LTR/Gypsy 615 839 (0) 3145867 331 29.3 7.6 8.1 chr12 106748264 106748309 (27103586) + MamGypLTR1c LTR/Gypsy 2 53 (750) 3146592 331 29.3 7.6 8.1 chr12 106748614 106748763 (27103132) + MamGypLTR1c LTR/Gypsy 54 197 (606) 3146592 331 21.1 16.6 3.3 chr12 107332095 107332248 (26519647) + LTR81C LTR/Gypsy 1029 1153 (0) 3147583 477 33.8 15.1 2.8 chr12 107495973 107496606 (26355289) + MamGypLTR2b LTR/Gypsy 159 870 (52) 3147858 471 29.9 9.9 4.5 chr12 107499432 107499866 (26352029) C MamGypLTR1c LTR/Gypsy (2) 801 326 3147867 229 20.6 1.4 10.0 chr12 107506668 107506737 (26345158) + MamGypLTR2b LTR/Gypsy 677 740 (182) 3147884 249 35.8 2.1 1.0 chr12 107506738 107506825 (26345070) + MamGypLTR2b LTR/Gypsy 152 240 (682) 3147885 506 26.8 4.2 3.7 chr12 107509276 107509465 (26342430) + MamGypLTR2b LTR/Gypsy 677 867 (55) 3147893 302 17.2 9.1 1.1 chr12 107564022 107564109 (26287786) + MamGypLTR1b LTR/Gypsy 676 770 (12) 3148000 363 30.2 4.4 11.4 chr12 107576803 107577030 (26274865) + MamGypLTR3 LTR/Gypsy 616 827 (12) 3148033 270 24.4 2.4 0.0 chr12 107621765 107621849 (26230046) C MamGypLTR2b LTR/Gypsy (30) 892 822 3148120 291 31.9 13.9 4.0 chr12 107621905 107622178 (26229717) C LTR81B LTR/Gypsy (259) 1134 834 3148121 393 30.2 1.6 0.0 chr12 107683709 107683834 (26168061) C MamGypLTR1a LTR/Gypsy (61) 721 594 3148242 484 27.1 13.8 9.3 chr12 107684357 107684689 (26167206) C MamGypLTR1a LTR/Gypsy (436) 348 1 3148242 312 15.0 1.7 0.0 chr12 108073340 108073399 (25778496) + MamGypLTR2b LTR/Gypsy 848 908 (14) 3149108 302 23.4 1.3 5.2 chr12 108455201 108455298 (25396597) C MamGypLTR2b LTR/Gypsy (24) 898 712 3149753 233 29.7 8.8 2.6 chr12 108475733 108475846 (25376049) + MamGypLTR3 LTR/Gypsy 692 812 (27) 3149803 463 25.2 3.6 2.2 chr12 108550420 108550557 (25301338) C MamGypLTR1a LTR/Gypsy (14) 770 631 3149985 314 32.3 1.6 2.4 chr12 108551602 108551728 (25300167) C MamGypLTR1a LTR/Gypsy (650) 134 9 3149985 568 31.8 9.3 4.3 chr12 108667746 108668166 (25183729) + LTR81B LTR/Gypsy 62 503 (890) 3150285 271 29.6 4.2 5.6 chr12 108669532 108669674 (25182221) + LTR81B LTR/Gypsy 1253 1393 (0) 3150285 529 31.5 14.6 8.6 chr12 108846653 108847104 (25004791) C MamGypLTR1b LTR/Gypsy (79) 703 225 3150712 996 30.7 4.6 2.7 chr12 110553960 110554327 (23297568) C MamGypLTR1a LTR/Gypsy (9) 775 401 3154358 256 24.6 9.1 9.1 chr12 111311407 111311549 (22540346) + MamGypLTR2c LTR/Gypsy 926 1068 (0) 3156067 323 28.2 1.8 9.2 chr12 111453524 111453625 (22398270) + MamGypLTR1c LTR/Gypsy 651 748 (55) 3156422 323 28.2 1.8 9.2 chr12 111453932 111453992 (22397903) + MamGypLTR1c LTR/Gypsy 749 802 (1) 3156422 833 28.2 6.1 5.5 chr12 111742283 111742612 (22109283) C MamGypLTR3 LTR/Gypsy (2) 837 506 3157029 240 27.0 1.1 6.3 chr12 112837796 112837827 (21014068) + MamGypLTR1d LTR/Gypsy 723 755 (58) 3159342 240 27.0 1.1 6.3 chr12 112838168 112838229 (21013666) + MamGypLTR1d LTR/Gypsy 756 812 (1) 3159342 563 30.7 13.5 0.3 chr12 113467060 113467363 (20384532) + MamGypLTR1c LTR/Gypsy 445 788 (15) 3160805 302 26.8 7.1 1.0 chr12 115459783 115459880 (18392015) C MamGypLTR2c LTR/Gypsy (42) 1026 923 3165147 239 31.5 7.3 3.4 chr12 115553712 115553915 (18297980) + MamGypLTR2c LTR/Gypsy 54 265 (803) 3165358 313 33.1 8.1 2.2 chr12 115696166 115696301 (18155594) + LTR81B LTR/Gypsy 334 477 (916) 3165665 257 28.3 14.8 0.8 chr12 116794059 116794186 (17057709) C LTR81 LTR/Gypsy (1002) 187 42 3167804 423 33.3 6.0 5.1 chr12 118292336 118292667 (15559228) + MamGypLTR3 LTR/Gypsy 503 837 (2) 3171113 271 27.6 7.2 4.6 chr12 118886505 118886656 (14965239) C MamGypLTR1c LTR/Gypsy (4) 799 644 3172434 582 26.3 6.3 8.7 chr12 119122929 119122971 (14728924) + MamGypLTR2b LTR/Gypsy 576 617 (305) 3172963 582 26.3 6.3 8.7 chr12 119123337 119123579 (14728316) + MamGypLTR2b LTR/Gypsy 618 855 (67) 3172963 289 30.9 3.1 1.0 chr12 119435169 119435266 (14416629) C MamGypLTR1c LTR/Gypsy (212) 591 492 3173599 1036 23.4 7.4 2.7 chr12 119435271 119435568 (14416327) C MamGypLTR1c LTR/Gypsy (484) 319 8 3173599 355 29.0 12.9 0.7 chr12 119882244 119882382 (13969513) C MamGypLTR3 LTR/Gypsy (0) 839 684 3174574 296 23.8 1.2 2.4 chr12 119882419 119882500 (13969395) C MamGypLTR3 LTR/Gypsy (234) 605 525 3174574 330 31.7 7.5 4.8 chr12 119882542 119882687 (13969208) C MamGypLTR3 LTR/Gypsy (618) 221 72 3174574 365 33.7 1.0 0.0 chr12 121398961 121399061 (12452834) C MamGypLTR1b LTR/Gypsy (275) 507 406 3177879 325 25.7 9.9 3.5 chr12 122921622 122921762 (10930133) + LTR81B LTR/Gypsy 176 325 (1068) 3181365 303 34.8 10.1 5.6 chr12 124477076 124477343 (9374552) + MamGyp-int LTR/Gypsy 549 828 (4234) 3184741 490 35.5 7.8 2.1 chr12 124477472 124477845 (9374050) + MamGyp-int LTR/Gypsy 1054 1448 (3614) 3184741 831 33.7 5.5 0.3 chr12 124477904 124478195 (9373700) + MamGyp-int LTR/Gypsy 1540 1846 (3216) 3184741 227 21.7 8.8 8.8 chr12 124758675 124758765 (9093130) C MamGypLTR2b LTR/Gypsy (24) 898 808 3185273 238 21.9 7.0 4.7 chr12 124759411 124759496 (9092399) C LTR81B LTR/Gypsy (1207) 186 99 3185275 253 32.9 6.7 2.4 chr12 125161790 125161954 (8689941) + LTR81B LTR/Gypsy 976 1147 (246) 3185999 425 28.9 4.9 0.7 chr12 125235217 125235359 (8616536) C MamGypLTR1a LTR/Gypsy (1) 783 635 3186184 235 29.7 10.5 3.3 chr12 125236435 125236587 (8615308) C MamGypLTR1a LTR/Gypsy (607) 177 14 3186184 313 30.8 10.7 4.5 chr12 125638103 125638326 (8213569) + MamGypLTR1c LTR/Gypsy 525 762 (41) 3187070 228 28.4 5.9 0.0 chr12 125647857 125647958 (8203937) C MamGypLTR1d LTR/Gypsy (61) 742 635 3187094 258 27.7 1.3 15.6 chr12 125648115 125648151 (8203744) C MamGypLTR1d LTR/Gypsy (615) 198 162 3187094 258 27.7 1.3 15.6 chr12 125648778 125648885 (8203010) C MamGypLTR1d LTR/Gypsy (652) 161 67 3187094 353 24.8 2.7 10.7 chr12 125876020 125876168 (7975727) + MamGypLTR1d LTR/Gypsy 433 569 (244) 3187562 418 22.9 7.6 0.0 chr12 125876631 125876735 (7975160) + MamGypLTR1d LTR/Gypsy 700 812 (1) 3187562 431 29.7 4.8 3.7 chr12 126595004 126595192 (7256703) C MamGypLTR1c LTR/Gypsy (603) 200 10 3188693 554 31.0 7.4 1.4 chr12 126624051 126624266 (7227629) + MamGypLTR3 LTR/Gypsy 508 736 (103) 3188731 237 27.0 0.6 1.7 chr12 126625412 126625507 (7226388) + MamGypLTR1d LTR/Gypsy 769 813 (0) 3188734 235 26.9 9.4 2.7 chr12 127481620 127481768 (6370127) + MamGypLTR1c LTR/Gypsy 10 168 (635) 3190091 270 25.3 18.4 9.2 chr12 128233632 128233849 (5618046) + MamGypLTR1c LTR/Gypsy 486 723 (80) 3191334 418 29.0 2.9 2.9 chr12 128304249 128304422 (5547473) + MamGypLTR2b LTR/Gypsy 749 922 (0) 3191454 228 29.0 12.0 3.8 chr12 128316050 128316232 (5535663) + MamGypLTR1c LTR/Gypsy 135 332 (471) 3191472 225 22.6 3.2 0.0 chr12 128440191 128440252 (5411643) + MamGypLTR1c LTR/Gypsy 740 803 (0) 3191672 428 26.7 3.3 1.3 chr12 128577739 128577890 (5274005) C MamGypLTR1d LTR/Gypsy (645) 168 14 3191901 283 28.9 17.6 1.1 chr12 128590023 128590204 (5261691) C MamGypLTR2b LTR/Gypsy (55) 867 656 3191927 286 35.5 5.6 4.4 chr12 128617521 128617841 (5234054) + MamGypLTR1b LTR/Gypsy 422 746 (36) 3191971 300 25.6 6.7 2.5 chr12 128642805 128642924 (5208971) + MamGypLTR1d LTR/Gypsy 689 813 (0) 3192021 226 28.1 6.9 1.7 chr12 129040088 129040203 (4811692) + MamGypLTR1b LTR/Gypsy 1 122 (660) 3192705 296 20.7 7.1 8.7 chr12 129086808 129086934 (4764961) C MamGypLTR2b LTR/Gypsy (14) 908 784 3192800 240 32.5 10.0 5.9 chr12 129135611 129135881 (4716014) C MamGypLTR1c LTR/Gypsy (80) 723 442 3192894 462 20.8 11.0 1.6 chr12 129141760 129141886 (4710009) C MamGypLTR1d LTR/Gypsy (667) 146 8 3192904 233 21.4 0.0 3.5 chr12 129174029 129174086 (4677809) C MamGypLTR2b LTR/Gypsy (24) 898 843 3192975 238 28.9 18.2 0.0 chr12 129177414 129177534 (4674361) C MamGypLTR1c LTR/Gypsy (658) 145 3 3192982 304 27.4 9.8 0.0 chr12 129206808 129206969 (4644926) C MamGypLTR1d LTR/Gypsy (17) 796 632 3193030 413 21.6 10.0 7.3 chr12 129341970 129342119 (4509776) + MamGypLTR1b LTR/Gypsy 83 236 (546) 3193299 347 31.2 7.3 3.4 chr12 129342152 129342357 (4509538) + MamGypLTR1b LTR/Gypsy 534 747 (35) 3193300 231 29.1 5.2 4.3 chr12 129481169 129481283 (4370612) + MamGypLTR2c LTR/Gypsy 2 117 (951) 3193577 581 33.8 5.6 3.6 chr12 129647449 129647785 (4204110) + MamGypLTR3 LTR/Gypsy 486 829 (10) 3193850 577 27.9 8.2 3.6 chr12 129737795 129738125 (4113770) + MamGypLTR1c LTR/Gypsy 456 801 (2) 3194003 289 18.6 7.9 3.4 chr12 129767203 129767291 (4084604) + MamGypLTR1c LTR/Gypsy 697 789 (14) 3194049 392 22.4 0.0 1.2 chr12 129918462 129918547 (3933348) + MamGypLTR1d LTR/Gypsy 728 812 (1) 3194297 300 29.6 6.5 4.1 chr12 130030254 130030422 (3821473) C LTR81B LTR/Gypsy (33) 1360 1188 3194492 404 30.0 6.6 8.5 chr12 130032829 130033145 (3818750) C LTR81A LTR/Gypsy (918) 432 122 3194498 278 25.0 0.9 7.4 chr12 130033275 130033382 (3818513) C LTR81A LTR/Gypsy (1230) 120 20 3194498 231 31.9 2.8 4.3 chr12 130090915 130091055 (3760840) + MamGypLTR2b LTR/Gypsy 294 432 (490) 3194589 229 29.0 7.1 6.5 chr12 130206429 130206583 (3645312) C MamGypLTR1d LTR/Gypsy (0) 813 658 3194772 250 34.5 3.8 10.8 chr12 130238637 130238821 (3613074) + MamGypLTR2b LTR/Gypsy 27 198 (724) 3194827 287 30.5 17.5 0.0 chr12 130447892 130448045 (3403850) C MamGypLTR1d LTR/Gypsy (595) 218 38 3195161 227 28.0 2.6 1.3 chr12 130472781 130472856 (3379039) C MamGypLTR1d LTR/Gypsy (471) 342 266 3195191 296 24.0 4.4 11.7 chr12 130973185 130973321 (2878574) + MamGypLTR1c LTR/Gypsy 19 145 (658) 3195920 262 33.1 6.2 0.8 chr12 131191515 131191642 (2660253) + MamGypLTR2b LTR/Gypsy 704 838 (84) 3196281 479 34.0 6.4 0.5 chr12 131599437 131599640 (2252255) C MamGypLTR1d LTR/Gypsy (0) 813 598 3196959 440 22.8 4.3 1.4 chr12 131696049 131696186 (2155709) C MamGypLTR2b LTR/Gypsy (14) 908 767 3197078 321 38.4 7.8 5.5 chr12 131907248 131907556 (1944339) + MamGypLTR2b LTR/Gypsy 3 318 (604) 3197322 413 29.5 10.4 0.0 chr12 131907801 131907993 (1943902) + MamGypLTR2b LTR/Gypsy 694 906 (16) 3197322 400 28.4 5.6 8.0 chr12 132678716 132678964 (1172931) + MamGypLTR3 LTR/Gypsy 480 722 (117) 3198410 378 30.1 5.0 5.9 chr13 19175162 19175383 (95994495) C LTR81A LTR/Gypsy (334) 1016 797 3200176 1106 34.1 10.3 4.9 chr13 19273798 19274641 (95895237) C LTR81 LTR/Gypsy (207) 982 77 3200300 1052 34.1 10.3 4.9 chr13 19275005 19275077 (95894801) C LTR81 LTR/Gypsy (1077) 76 1 3200300 311 32.8 3.9 7.8 chr13 19444082 19444339 (95725539) + MamGypLTR3 LTR/Gypsy 497 744 (95) 3200544 285 20.4 11.6 1.1 chr13 20920545 20920657 (94249221) + MamGypLTR1c LTR/Gypsy 661 802 (1) 3202997 316 27.2 12.7 8.4 chr13 20952739 20952975 (94216903) C LTR81 LTR/Gypsy (34) 1359 966 3203047 254 30.6 3.1 0.0 chr13 21683487 21683584 (93486294) C MamGypLTR2c LTR/Gypsy (500) 568 468 3204387 397 32.9 10.5 4.9 chr13 21777915 21778262 (93391616) + MamGypLTR1c LTR/Gypsy 373 742 (61) 3204604 397 32.9 10.5 4.9 chr13 21778574 21778614 (93391264) + MamGypLTR1c LTR/Gypsy 743 784 (19) 3204604 342 30.4 10.9 3.3 chr13 22853315 22853664 (92316214) + LTR81 LTR/Gypsy 372 755 (595) 3206146 288 30.2 4.1 1.0 chr13 22853690 22853786 (92316092) + LTR81 LTR/Gypsy 612 711 (442) 3206146 242 22.4 0.0 0.0 chr13 22853997 22854045 (92315833) + LTR81 LTR/Gypsy 1201 1249 (144) 3206146 602 30.2 10.4 4.2 chr13 23626104 23626699 (91543179) + LTR81B LTR/Gypsy 148 769 (624) 3207140 403 20.0 0.0 2.3 chr13 25234187 25234273 (89935605) + MamGypLTR1d LTR/Gypsy 728 812 (1) 3209396 279 30.8 10.6 4.4 chr13 25785891 25786165 (89383713) C LTR81B LTR/Gypsy (204) 1189 898 3210231 243 26.5 16.9 2.9 chr13 26032192 26032327 (89137551) + LTR81C LTR/Gypsy 20 174 (1176) 3210637 404 31.2 11.3 7.1 chr13 26033108 26033531 (89136347) + LTR81C LTR/Gypsy 701 1142 (11) 3210637 415 26.8 5.7 1.7 chr13 26667727 26667901 (88501977) + MamGypLTR1a LTR/Gypsy 7 188 (625) 3211417 949 28.9 10.0 1.5 chr13 26668031 26668371 (88501507) + MamGypLTR1a LTR/Gypsy 401 770 (14) 3211417 253 25.0 8.3 0.0 chr13 26761527 26761598 (88408280) C MamGypLTR1d LTR/Gypsy (12) 801 724 3211567 254 31.6 9.9 3.4 chr13 27470271 27470545 (87699333) C LTR81A LTR/Gypsy (928) 422 7 3212644 359 35.1 7.6 1.3 chr13 28055900 28056124 (87113754) C MamGypLTR3 LTR/Gypsy (56) 783 545 3213652 237 21.6 5.7 9.0 chr13 29140250 29140371 (86029507) + LTR81A LTR/Gypsy 121 238 (1112) 3215509 290 17.6 17.4 6.4 chr13 29141034 29141142 (86028736) + MamGypLTR2b LTR/Gypsy 773 893 (29) 3215510 287 23.3 4.0 9.2 chr13 29149575 29149793 (86020085) + LTR81C LTR/Gypsy 863 1173 (220) 3215523 309 27.1 8.5 0.7 chr13 29199202 29199342 (85970536) + MamGypLTR2c LTR/Gypsy 843 994 (74) 3215603 430 28.1 16.5 7.3 chr13 29565806 29566434 (85603444) C MamGypLTR1a LTR/Gypsy (53) 731 41 3216148 443 26.7 4.1 3.0 chr13 29750104 29750300 (85419578) C MamGypLTR2c LTR/Gypsy (2) 1066 868 3216376 329 30.3 4.8 2.7 chr13 31551715 31551860 (83618018) C MamGyp-int LTR/Gypsy (1667) 3395 3247 3219131 567 21.6 15.2 1.8 chr13 31610173 31610337 (83559541) C MamGypLTR1c LTR/Gypsy (0) 803 617 3219220 368 29.6 3.2 6.4 chr13 31610421 31610640 (83559238) C MamGypLTR1c LTR/Gypsy (351) 452 240 3219220 410 30.8 9.5 5.6 chr13 32131694 32131919 (83037959) + MamGypLTR1c LTR/Gypsy 3 235 (568) 3219899 410 30.8 9.5 5.6 chr13 32132223 32132425 (83037453) + MamGypLTR1c LTR/Gypsy 236 449 (354) 3219899 426 24.9 18.8 5.4 chr13 32556988 32557205 (82612673) + LTR81A LTR/Gypsy 28 274 (4) 3220504 433 29.4 5.7 4.8 chr13 33520557 33520785 (81649093) + MamGypLTR1a LTR/Gypsy 4 234 (550) 3221970 446 25.4 7.9 0.0 chr13 33521058 33521183 (81648695) + MamGypLTR1a LTR/Gypsy 647 782 (2) 3221970 287 31.7 3.2 0.8 chr13 34437381 34437504 (80732374) C MamGypLTR1d LTR/Gypsy (4) 809 683 3223308 440 31.5 5.3 3.2 chr13 34815791 34816010 (80353868) C MamGypLTR1c LTR/Gypsy (17) 796 571 3223862 371 17.6 0.0 1.3 chr13 34817420 34817494 (80352384) + MamGypLTR2b LTR/Gypsy 822 895 (27) 3223864 316 28.0 4.3 2.1 chr13 34989148 34989333 (80180545) + LTR81B LTR/Gypsy 5 194 (1199) 3224086 382 18.3 2.8 10.8 chr13 35408454 35408581 (79761297) + LTR81C LTR/Gypsy 1056 1153 (0) 3224663 361 34.7 13.0 4.0 chr13 36293476 36293976 (78875902) + MamGypLTR1c LTR/Gypsy 248 793 (10) 3225907 300 28.0 19.0 0.0 chr13 36858766 36858865 (78311013) + LTR81C LTR/Gypsy 116 234 (44) 3226672 340 28.3 12.2 5.5 chr13 36859082 36859335 (78310543) + LTR81C LTR/Gypsy 877 1147 (6) 3226672 480 31.0 2.8 3.7 chr13 37118922 37119139 (78050739) + LTR81B LTR/Gypsy 1 216 (1177) 3227022 264 10.8 13.0 3.9 chr13 37226268 37226344 (77943534) + MamGypLTR1d LTR/Gypsy 5 88 (725) 3227190 352 30.2 13.3 5.0 chr13 37226588 37226887 (77942991) + MamGypLTR1d LTR/Gypsy 475 799 (14) 3227191 235 22.7 11.2 4.8 chr13 37743045 37743169 (77426709) C MamGypLTR2b LTR/Gypsy (15) 907 775 3227960 228 34.6 8.7 7.3 chr13 37743239 37743650 (77426228) C MamGypLTR2b LTR/Gypsy (361) 561 144 3227961 422 35.9 2.3 2.3 chr13 37783690 37783860 (77386018) + LTR81A LTR/Gypsy 781 951 (399) 3228013 235 25.0 5.8 2.3 chr13 37784037 37784122 (77385756) + LTR81A LTR/Gypsy 1076 1164 (186) 3228013 246 28.1 2.2 1.1 chr13 37784151 37784240 (77385638) + MamGypLTR2c LTR/Gypsy 972 1062 (6) 3228014 293 31.8 7.5 5.8 chr13 37842735 37843028 (77326850) + LTR81B LTR/Gypsy 154 452 (941) 3228089 390 34.4 6.7 6.4 chr13 38914412 38914725 (76255153) + MamGypLTR1a LTR/Gypsy 5 319 (465) 3229416 234 34.0 8.4 7.1 chr13 39101150 39101374 (76068504) + LTR81C LTR/Gypsy 482 709 (444) 3229672 401 22.3 2.9 3.4 chr13 39532293 39532429 (75637449) + MamGypLTR1a LTR/Gypsy 607 741 (62) 3230254 377 22.6 2.3 5.3 chr13 39536585 39536715 (75633163) + LTR81B LTR/Gypsy 162 288 (1105) 3230262 348 26.7 1.1 0.0 chr13 39543313 39543402 (75626476) + MamGypLTR1a LTR/Gypsy 128 218 (566) 3230272 413 19.9 19.1 4.5 chr13 40575153 40575355 (74594523) C LTR81B LTR/Gypsy (1104) 246 12 3231667 383 30.8 14.6 4.0 chr13 40713175 40713701 (74456177) + LTR81A LTR/Gypsy 767 1349 (1) 3231869 491 28.2 13.4 3.5 chr13 40978116 40978376 (74191502) + LTR81A LTR/Gypsy 26 312 (1038) 3232286 425 29.9 6.5 1.6 chr13 40978589 40978833 (74191045) + LTR81A LTR/Gypsy 645 901 (492) 3232286 375 29.0 4.5 0.8 chr13 42225464 42225595 (72944283) + MamGypLTR1d LTR/Gypsy 46 182 (631) 3234321 250 27.5 4.9 2.4 chr13 42585723 42585886 (72583992) C MamGypLTR2b LTR/Gypsy (2) 920 753 3234873 226 22.5 13.8 0.0 chr13 42586505 42586584 (72583294) C LTR81B LTR/Gypsy (1205) 188 98 3234874 293 38.6 2.6 0.9 chr13 42837082 42837196 (72332682) + MamGypLTR2b LTR/Gypsy 496 612 (310) 3235273 277 27.4 5.2 1.7 chr13 43390703 43390858 (71779020) + MamGypLTR1a LTR/Gypsy 637 800 (3) 3236080 235 18.4 11.7 1.3 chr13 43709329 43709405 (71460473) + MamGypLTR1c LTR/Gypsy 653 737 (66) 3236580 510 26.8 5.2 1.6 chr13 44385237 44385429 (70784449) C MamGypLTR1d LTR/Gypsy (2) 811 612 3237416 259 24.8 7.2 8.2 chr13 44386156 44386386 (70783492) C MamGypLTR1d LTR/Gypsy (449) 354 129 3237416 233 17.4 22.6 1.1 chr13 44407619 44407711 (70762167) + MamGypLTR2c LTR/Gypsy 62 174 (894) 3237449 635 30.8 12.9 4.4 chr13 44407790 44408152 (70761726) + MamGypLTR2c LTR/Gypsy 673 1066 (2) 3237450 228 12.8 2.6 0.0 chr13 44551201 44551239 (70618639) + MamGypLTR2b LTR/Gypsy 749 788 (134) 3237657 275 30.2 9.1 4.1 chr13 44556432 44556552 (70613326) C MamGypLTR3 LTR/Gypsy (448) 391 265 3237666 288 31.4 4.4 5.4 chr13 44580295 44580499 (70589379) C LTR81A LTR/Gypsy (172) 1178 976 3237698 276 34.3 0.0 0.9 chr13 44841106 44841214 (70328664) + MamGypLTR2c LTR/Gypsy 434 541 (527) 3238055 233 13.0 19.6 0.0 chr13 44843204 44843249 (70326629) C MamGypLTR1b LTR/Gypsy (39) 743 689 3238058 303 33.5 4.4 6.1 chr13 44843314 44843494 (70326384) C MamGypLTR1b LTR/Gypsy (264) 518 341 3238058 445 25.8 11.1 9.2 chr13 45441919 45442304 (69727574) C LTR81B LTR/Gypsy (802) 591 224 3239107 278 27.4 8.7 2.5 chr13 45451201 45451361 (69718517) + MamGypLTR3 LTR/Gypsy 514 684 (155) 3239120 277 29.7 6.4 4.1 chr13 45629524 45629695 (69540183) C LTR81B LTR/Gypsy (1201) 192 17 3239464 248 22.9 23.8 6.3 chr13 45636370 45636420 (69533458) + MamGypLTR1d LTR/Gypsy 656 703 (100) 3239479 255 21.0 8.9 0.9 chr13 45636723 45636796 (69533082) + MamGypLTR1d LTR/Gypsy 704 813 (0) 3239479 476 30.3 16.9 3.0 chr13 45658825 45659120 (69510758) C LTR81B LTR/Gypsy (5) 1388 1052 3239535 611 19.5 8.0 4.0 chr13 46123464 46123639 (69046239) + MamGypLTR2c LTR/Gypsy 844 1026 (42) 3240471 361 32.1 5.2 2.9 chr13 46382879 46383051 (68786827) + MamGypLTR1c LTR/Gypsy 620 796 (7) 3240829 229 24.1 0.0 3.3 chr13 46421117 46421176 (68748702) + LTR81B LTR/Gypsy 603 660 (733) 3240905 325 32.8 8.1 6.3 chr13 46968002 46968333 (68201545) C MamGypLTR1b LTR/Gypsy (1) 781 444 3241750 247 9.8 0.0 0.0 chr13 46968680 46968720 (68201158) C MamGypLTR1b LTR/Gypsy (741) 41 1 3241751 559 31.5 11.8 5.3 chr13 47071703 47072101 (68097777) C MamGypLTR1b LTR/Gypsy (197) 585 161 3241921 686 28.5 7.9 3.6 chr13 47479311 47479587 (67690291) C MamGypLTR3 LTR/Gypsy (5) 834 546 3242495 266 20.3 9.2 2.6 chr13 47582131 47582206 (67587672) C LTR81A LTR/Gypsy (0) 1350 1270 3242631 244 25.4 19.3 4.0 chr13 47582222 47582397 (67587481) C LTR81A LTR/Gypsy (126) 1267 1065 3242631 308 31.8 3.1 5.6 chr13 47587946 47587978 (67581900) C LTR81A LTR/Gypsy (297) 1053 1024 3242631 308 31.8 3.1 5.6 chr13 47588620 47588745 (67581133) C LTR81A LTR/Gypsy (327) 1023 898 3242631 429 34.2 6.1 1.8 chr13 47813269 47813545 (67356333) + LTR81C LTR/Gypsy 637 925 (228) 3242933 374 32.3 2.5 2.0 chr13 48171106 48171304 (66998574) C MamGypLTR1c LTR/Gypsy (20) 783 584 3243375 250 31.8 5.6 8.6 chr13 48171414 48171647 (66998231) C MamGypLTR1c LTR/Gypsy (251) 562 336 3243375 448 23.1 8.9 0.7 chr13 48184527 48184661 (66985217) C MamGypLTR1d LTR/Gypsy (10) 803 658 3243388 407 25.3 12.3 0.6 chr13 48185245 48185354 (66984524) C MamGypLTR1d LTR/Gypsy (620) 193 68 3243388 407 25.3 12.3 0.6 chr13 48185777 48185836 (66984042) C MamGypLTR1d LTR/Gypsy (746) 67 4 3243388 386 27.4 1.2 3.0 chr13 48191935 48192103 (66977775) C MamGypLTR2b LTR/Gypsy (43) 879 714 3243397 274 35.0 7.7 8.4 chr13 48193366 48193652 (66976226) C MamGypLTR2b LTR/Gypsy (599) 323 39 3243397 314 34.8 6.6 5.0 chr13 48348195 48348496 (66821382) + MamGypLTR3 LTR/Gypsy 293 599 (240) 3243592 244 27.3 1.3 1.3 chr13 48390184 48390261 (66779617) C LTR81AB LTR/Gypsy (193) 85 8 3243639 235 32.0 0.8 4.5 chr13 48396019 48396152 (66773726) + LTR81A LTR/Gypsy 474 602 (748) 3243648 426 31.8 0.0 0.0 chr13 48396385 48396494 (66773384) + LTR81 LTR/Gypsy 496 605 (584) 3243650 395 22.5 1.4 12.2 chr13 48600222 48600297 (66569581) + LTR81B LTR/Gypsy 89 153 (1240) 3243978 395 22.5 1.4 12.2 chr13 48600604 48600673 (66569205) + LTR81B LTR/Gypsy 154 219 (1174) 3243978 376 15.7 1.4 2.8 chr13 48601216 48601287 (66568591) + LTR81 LTR/Gypsy 1119 1189 (0) 3243981 283 35.1 12.8 9.4 chr13 49287011 49287362 (65882516) + MamGypLTR1a LTR/Gypsy 356 719 (65) 3245053 235 22.8 7.0 0.0 chr13 49791813 49791869 (65378009) + LTR81C LTR/Gypsy 1052 1112 (41) 3245822 256 23.4 11.5 2.1 chr13 50767198 50767293 (64402585) C LTR81 LTR/Gypsy (214) 975 871 3247548 327 31.2 8.6 0.7 chr13 50768397 50768535 (64401343) C LTR81C LTR/Gypsy (966) 187 38 3247552 321 29.6 15.3 6.7 chr13 50862806 50863105 (64306773) + LTR81B LTR/Gypsy 231 556 (837) 3247694 1172 30.0 7.7 2.3 chr13 50863278 50863799 (64306079) + LTR81B LTR/Gypsy 780 1329 (64) 3247694 376 23.2 11.9 8.8 chr13 50990511 50990704 (64179174) + MamGypLTR1c LTR/Gypsy 1 200 (603) 3247874 502 22.4 5.1 2.2 chr13 50991334 50991470 (64178408) + MamGypLTR1c LTR/Gypsy 660 800 (3) 3247874 332 22.6 6.4 1.1 chr13 51814827 51814920 (63354958) C MamGypLTR2c LTR/Gypsy (0) 1068 970 3249000 227 38.3 5.1 2.8 chr13 51814983 51815197 (63354681) C MamGypLTR2c LTR/Gypsy (793) 275 56 3249001 421 33.5 7.4 2.2 chr13 51865035 51865303 (63304575) + MamGypLTR1b LTR/Gypsy 494 776 (6) 3249067 469 30.6 13.9 2.4 chr13 52194150 52194481 (62975397) C LTR81B LTR/Gypsy (65) 1328 959 3249584 254 27.0 19.5 5.9 chr13 52233416 52233584 (62936294) C LTR81B LTR/Gypsy (142) 1251 1060 3249635 391 27.6 5.4 4.1 chr13 52233937 52234178 (62935700) C LTR81B LTR/Gypsy (1148) 245 1 3249635 345 21.5 18.5 1.3 chr13 52444355 52444505 (62725373) + LTR81A LTR/Gypsy 9 185 (1165) 3249924 228 29.7 1.9 2.9 chr13 52652921 52653024 (62516854) + MamGypLTR1b LTR/Gypsy 651 753 (29) 3250218 378 24.5 15.1 5.0 chr13 53378106 53378264 (61791614) C LTR81A LTR/Gypsy (1156) 194 20 3251357 501 27.4 10.1 0.0 chr13 53437232 53437399 (61732479) + MamGypLTR1a LTR/Gypsy 587 771 (13) 3251440 256 32.4 7.8 9.5 chr13 53462383 53462665 (61707213) C MamGypLTR1c LTR/Gypsy (0) 803 526 3251474 249 30.5 9.0 5.0 chr13 53463129 53463328 (61706550) C MamGypLTR1c LTR/Gypsy (599) 214 7 3251474 275 31.1 6.0 1.5 chr13 53467847 53467980 (61701898) C MamGypLTR2b LTR/Gypsy (514) 408 269 3251480 240 31.8 3.5 7.0 chr13 53468274 53468415 (61701463) C MamGypLTR1c LTR/Gypsy (665) 138 2 3251481 257 33.6 0.8 3.4 chr13 53538862 53538978 (61630900) C MamGypLTR1c LTR/Gypsy (223) 590 477 3251595 374 35.5 8.9 6.4 chr13 53538991 53539472 (61630406) C MamGypLTR1c LTR/Gypsy (309) 494 1 3251595 338 30.9 2.1 0.7 chr13 53677543 53677682 (61492196) C MamGypLTR2b LTR/Gypsy (0) 922 781 3251781 234 26.1 1.1 3.3 chr13 53678057 53678147 (61491731) C MamGypLTR2b LTR/Gypsy (947) 121 33 3251781 317 35.3 9.8 5.0 chr13 53929161 53929619 (61240259) C LTR81C LTR/Gypsy (242) 911 431 3252118 274 24.9 7.7 6.8 chr13 53961728 53961888 (61207990) C MamGypLTR2b LTR/Gypsy (24) 898 637 3252160 359 23.1 4.9 6.9 chr13 54023278 54023421 (61146457) + MamGypLTR1d LTR/Gypsy 2 142 (671) 3252245 649 28.2 5.2 4.9 chr13 54125189 54125516 (61044362) + LTR81A LTR/Gypsy 5 333 (1017) 3252399 700 27.1 6.4 3.0 chr13 54330922 54331187 (60838691) + LTR81A LTR/Gypsy 36 310 (1040) 3252653 304 31.9 19.8 0.9 chr13 54743629 54743840 (60426038) C MamGypLTR1c LTR/Gypsy (0) 803 552 3253159 242 17.4 0.0 0.0 chr13 54897929 54897974 (60271904) + MamGypLTR1a LTR/Gypsy 1 46 (736) 3253324 288 25.7 12.3 6.8 chr13 54898011 54898156 (60271722) + MamGypLTR1a LTR/Gypsy 31 184 (600) 3253324 427 28.1 14.7 2.5 chr13 55433310 55433506 (59736372) + MamGypLTR2c LTR/Gypsy 848 1068 (0) 3254016 267 30.5 6.3 5.4 chr13 55562746 55562967 (59606911) + MamGypLTR2b LTR/Gypsy 671 894 (28) 3254197 371 25.6 3.0 3.3 chr13 55677769 55677915 (59491963) + LTR81A LTR/Gypsy 181 321 (1072) 3254339 509 30.9 8.0 4.5 chr13 55679098 55679385 (59490493) + LTR81A LTR/Gypsy 1043 1340 (10) 3254339 252 32.7 9.3 0.7 chr13 55687644 55687794 (59482084) + LTR81C LTR/Gypsy 222 385 (768) 3254360 278 26.5 11.3 7.5 chr13 55889151 55889309 (59280569) C MamGypLTR2b LTR/Gypsy (6) 916 752 3254621 479 32.9 6.8 4.3 chr13 56323954 56324305 (58845573) C MamGypLTR1c LTR/Gypsy (0) 803 443 3255193 343 41.0 3.1 0.5 chr13 57486326 57486521 (57683357) C MamGypLTR1a LTR/Gypsy (157) 627 427 3256715 279 40.9 10.6 1.3 chr13 58063152 58063602 (57106276) C LTR81B LTR/Gypsy (310) 1083 591 3257471 618 34.8 8.6 1.3 chr13 58140042 58140344 (57029534) + MamGyp-int LTR/Gypsy 2033 2357 (2705) 3257593 304 34.1 9.8 0.0 chr13 58332587 58332791 (56837087) C MamGypLTR2b LTR/Gypsy (3) 919 695 3257825 349 28.1 2.1 1.0 chr13 58508344 58508440 (56661438) C MamGypLTR1c LTR/Gypsy (55) 748 651 3258046 339 25.3 10.1 5.3 chr13 59041620 59041804 (56128074) + MamGypLTR1d LTR/Gypsy 603 804 (9) 3258713 302 22.5 10.8 7.7 chr13 59235195 59235324 (55934554) + LTR81A LTR/Gypsy 22 155 (1195) 3258963 253 31.2 1.6 0.0 chr13 59287443 59287506 (55882372) + MamGypLTR2c LTR/Gypsy 294 358 (710) 3259037 417 29.4 15.4 9.0 chr13 59673682 59674025 (55495853) + LTR81C LTR/Gypsy 788 1153 (0) 3259539 350 28.9 2.2 0.7 chr13 60144908 60145043 (55024835) C MamGypLTR1a LTR/Gypsy (3) 781 644 3260196 238 29.1 8.2 4.3 chr13 60373427 60373509 (54796369) + MamGypLTR2b LTR/Gypsy 695 786 (136) 3260507 238 29.1 8.2 4.3 chr13 60373556 60373679 (54796199) + MamGypLTR2b LTR/Gypsy 787 909 (13) 3260507 289 25.9 1.2 1.2 chr13 60515191 60515276 (54654602) + LTR81AB LTR/Gypsy 128 213 (65) 3260675 254 32.6 7.8 3.9 chr13 60515608 60515760 (54654118) + MamGypLTR2b LTR/Gypsy 159 317 (605) 3260676 593 30.7 3.0 9.0 chr13 60775291 60775519 (54394359) + MamGypLTR2c LTR/Gypsy 196 410 (658) 3261067 593 30.7 3.0 9.0 chr13 60776035 60776105 (54393773) + MamGypLTR2c LTR/Gypsy 411 478 (590) 3261067 305 24.6 12.2 3.5 chr13 60776325 60776526 (54393352) + MamGypLTR2c LTR/Gypsy 697 1039 (29) 3261067 398 17.8 13.9 0.0 chr13 61366064 61366164 (53803714) C MamGypLTR2b LTR/Gypsy (0) 922 808 3261891 278 16.0 9.2 1.3 chr13 61366419 61366494 (53803384) C MamGypLTR2b LTR/Gypsy (112) 810 729 3261891 244 32.8 0.0 7.9 chr13 61366714 61366839 (53803039) C MamGypLTR2b LTR/Gypsy (536) 386 271 3261893 332 31.8 4.4 3.1 chr13 61720936 61721094 (53448784) + MamGypLTR1d LTR/Gypsy 643 803 (10) 3262349 481 29.8 1.9 3.4 chr13 61964760 61964964 (53204914) C MamGypLTR2b LTR/Gypsy (2) 920 719 3262618 322 33.3 5.2 1.2 chr13 62351527 62351699 (52818179) C MamGypLTR1b LTR/Gypsy (258) 524 345 3263137 262 21.3 3.1 4.7 chr13 62430236 62430299 (52739579) + LTR81A LTR/Gypsy 121 183 (1167) 3263248 252 31.7 3.8 7.5 chr13 63987792 63987924 (51181954) + MamGypLTR2c LTR/Gypsy 385 512 (556) 3265389 251 29.9 5.2 10.8 chr13 63988206 63988456 (51181422) + MamGypLTR2c LTR/Gypsy 830 1066 (2) 3265389 264 30.3 2.9 2.9 chr13 64205452 64205553 (50964325) C MamGypLTR1a LTR/Gypsy (524) 260 159 3265695 314 24.4 2.4 8.0 chr13 64685158 64685282 (50484596) + MamGypLTR2b LTR/Gypsy 802 919 (3) 3266327 234 36.6 2.2 2.9 chr13 64870273 64870410 (50299468) + LTR81B LTR/Gypsy 533 669 (724) 3266560 242 27.5 21.2 3.3 chr13 64870654 64870837 (50299041) + LTR81A LTR/Gypsy 996 1212 (138) 3266561 350 33.2 1.8 2.8 chr13 64949631 64949775 (50220103) + LTR81C LTR/Gypsy 320 449 (704) 3266655 311 34.0 1.2 3.1 chr13 65066660 65066820 (50103058) + LTR81A LTR/Gypsy 56 213 (1137) 3266818 227 23.9 1.3 7.8 chr13 65108940 65108991 (50060887) C LTR81AB LTR/Gypsy (100) 178 132 3266879 357 38.3 10.3 3.8 chr13 66540249 66540471 (48629407) + MamGypLTR1a LTR/Gypsy 147 385 (399) 3268778 357 38.3 10.3 3.8 chr13 66540552 66540902 (48628976) + MamGypLTR1a LTR/Gypsy 386 758 (26) 3268778 426 33.6 4.3 7.8 chr13 66659335 66659589 (48510289) C MamGypLTR3 LTR/Gypsy (37) 802 557 3268928 228 29.3 9.5 2.9 chr13 68176994 68177130 (46992748) + MamGypLTR1b LTR/Gypsy 609 754 (28) 3270844 398 29.1 8.7 3.7 chr13 68513896 68514113 (46655765) + LTR81B LTR/Gypsy 22 250 (1143) 3271283 225 33.1 5.7 9.3 chr13 68514399 68514591 (46655287) + LTR81B LTR/Gypsy 711 896 (454) 3271283 357 33.3 2.5 0.6 chr13 68723146 68723308 (46446570) C MamGypLTR1b LTR/Gypsy (0) 782 617 3271566 266 35.6 0.0 0.0 chr13 68723829 68723918 (46445960) C MamGypLTR1b LTR/Gypsy (625) 157 68 3271566 348 39.6 3.0 0.0 chr13 68786655 68786851 (46383027) + MamGypLTR1b LTR/Gypsy 336 538 (244) 3271653 759 33.4 12.6 0.6 chr13 68942050 68942407 (46227471) C MamGypLTR1b LTR/Gypsy (12) 770 370 3271875 506 22.3 4.3 3.7 chr13 69544331 69544493 (45625385) + MamGypLTR1b LTR/Gypsy 610 773 (9) 3272676 303 32.9 6.7 0.0 chr13 70175434 70175582 (44994296) C MamGypLTR1c LTR/Gypsy (0) 803 645 3273532 309 27.5 3.9 3.3 chr13 70796517 70796655 (44373223) C MamGypLTR1c LTR/Gypsy (597) 206 62 3274446 317 24.4 2.3 2.3 chr13 70856431 70856518 (44313360) C LTR81C LTR/Gypsy (151) 1002 915 3274537 263 35.6 3.4 1.0 chr13 70946068 70946274 (44223604) C LTR81A LTR/Gypsy (1120) 230 19 3274651 237 38.0 7.6 5.6 chr13 71146116 71146313 (44023565) C LTR81C LTR/Gypsy (440) 713 512 3274929 294 31.3 11.4 6.5 chr13 71205180 71205378 (43964500) C LTR81B LTR/Gypsy (36) 1357 1140 3275005 294 31.3 11.4 6.5 chr13 71205665 71205710 (43964168) C LTR81B LTR/Gypsy (254) 1139 1100 3275005 310 38.3 3.1 2.6 chr13 71250592 71250784 (43919094) C MamGyp-int LTR/Gypsy (4049) 1013 820 3275066 326 32.4 12.7 0.0 chr13 71563728 71563869 (43606009) + MamGypLTR3 LTR/Gypsy 312 471 (368) 3275508 254 19.5 8.6 6.5 chr13 72009463 72009555 (43160323) + MamGypLTR1b LTR/Gypsy 627 721 (61) 3276065 760 25.2 3.2 9.1 chr13 72478215 72478570 (42691308) C LTR81B LTR/Gypsy (1053) 340 14 3276695 350 26.2 9.6 3.0 chr13 72598500 72598696 (42571182) + MamGypLTR2b LTR/Gypsy 661 870 (52) 3276860 291 31.5 6.0 4.7 chr13 72814546 72814695 (42355183) C MamGypLTR1b LTR/Gypsy (581) 201 50 3277149 302 30.4 9.6 6.7 chr13 72824962 72825201 (42344677) C MamGypLTR3 LTR/Gypsy (46) 793 547 3277166 576 27.2 8.5 5.1 chr13 73023238 73023337 (42146541) C LTR81B LTR/Gypsy (52) 1341 1230 3277419 576 27.2 8.5 5.1 chr13 73023704 73023896 (42145982) C LTR81B LTR/Gypsy (164) 1229 1038 3277419 252 27.2 9.3 6.2 chr13 73064268 73064453 (42105425) C LTR81C LTR/Gypsy (67) 1326 1030 3277478 394 33.6 9.9 10.1 chr13 73070948 73071361 (42098517) C MamGypLTR1b LTR/Gypsy (320) 462 50 3277483 443 27.8 9.8 0.0 chr13 73765826 73765958 (41403920) + LTR81C LTR/Gypsy 977 1122 (31) 3278732 239 29.6 3.4 1.7 chr13 74116996 74117112 (41052766) C MamGypLTR1b LTR/Gypsy (17) 765 647 3279289 325 21.5 11.7 1.1 chr13 74127836 74127929 (41041949) + MamGypLTR3 LTR/Gypsy 705 808 (31) 3279300 284 27.1 2.8 1.8 chr13 74152656 74152764 (41017114) + LTR81B LTR/Gypsy 198 307 (1043) 3279337 437 26.5 19.2 5.0 chr13 74154297 74154598 (41015280) + LTR81B LTR/Gypsy 1046 1390 (3) 3279337 299 23.4 9.8 0.9 chr13 74208757 74208868 (40961010) C MamGypLTR1c LTR/Gypsy (13) 790 669 3279423 337 32.1 7.1 3.1 chr13 74209174 74209494 (40960384) C MamGypLTR2c LTR/Gypsy (726) 342 10 3279424 229 31.1 1.1 2.2 chr13 74223039 74223130 (40946748) + MamGypLTR2c LTR/Gypsy 172 262 (806) 3279442 253 32.6 2.0 1.0 chr13 74727503 74727601 (40442277) C MamGypLTR2c LTR/Gypsy (271) 797 698 3280147 278 32.3 2.2 3.0 chr13 74727775 74727908 (40441970) C MamGypLTR2c LTR/Gypsy (615) 453 321 3280147 498 30.3 3.5 10.4 chr13 74729367 74729489 (40440389) C MamGypLTR2c LTR/Gypsy (0) 1068 964 3280149 498 30.3 3.5 10.4 chr13 74729800 74730051 (40439827) C MamGypLTR2c LTR/Gypsy (105) 963 719 3280149 494 33.1 8.5 3.6 chr13 74730189 74730551 (40439327) C MamGypLTR2c LTR/Gypsy (616) 452 72 3280149 275 20.8 0.0 0.0 chr13 74772015 74772067 (40397811) + LTR81AB LTR/Gypsy 123 175 (103) 3280221 313 28.4 4.3 0.8 chr13 74773474 74773590 (40396288) + LTR81A LTR/Gypsy 1227 1347 (3) 3280224 354 33.6 10.3 3.7 chr13 74831577 74831876 (40338002) + MamGypLTR1d LTR/Gypsy 481 800 (13) 3280293 253 25.7 12.1 3.2 chr13 74992823 74992979 (40176899) + LTR81A LTR/Gypsy 53 223 (1127) 3280482 236 32.2 3.9 14.9 chr13 74993294 74993416 (40176462) + MamGypLTR2c LTR/Gypsy 296 416 (652) 3280483 236 32.2 3.9 14.9 chr13 74993831 74993913 (40175965) + MamGypLTR2c LTR/Gypsy 417 480 (588) 3280483 247 33.0 0.0 4.6 chr13 75095575 75095682 (40074196) C LTR81A LTR/Gypsy (1219) 131 29 3280607 318 29.9 14.1 2.6 chr13 75204723 75204866 (39965012) C MamGypLTR2b LTR/Gypsy (54) 868 699 3280763 318 29.9 14.1 2.6 chr13 75205213 75205294 (39964584) C MamGypLTR2b LTR/Gypsy (224) 698 616 3280763 291 26.6 7.8 0.8 chr13 75286922 75287050 (39882828) C MamGypLTR1c LTR/Gypsy (8) 795 658 3280880 259 35.8 6.7 3.9 chr13 75290186 75290365 (39879513) C MamGypLTR2b LTR/Gypsy (733) 189 5 3280883 534 30.2 13.7 7.8 chr13 75567737 75568160 (39601718) + LTR81B LTR/Gypsy 678 1366 (27) 3281243 577 23.9 6.3 1.8 chr13 75809958 75810179 (39359699) + MamGypLTR2b LTR/Gypsy 691 922 (0) 3281577 366 29.7 7.2 2.6 chr13 75827783 75827934 (39341944) + MamGypLTR3 LTR/Gypsy 665 823 (16) 3281593 298 21.1 10.9 6.6 chr13 76059936 76060072 (39109806) + LTR81B LTR/Gypsy 23 165 (1228) 3281962 300 34.3 8.6 2.5 chr13 76440348 76440584 (38729294) C MamGypLTR2b LTR/Gypsy (43) 879 622 3282504 300 34.3 8.6 2.5 chr13 76440882 76441002 (38728876) C MamGypLTR2b LTR/Gypsy (301) 621 499 3282504 252 34.0 10.1 0.0 chr13 76477276 76477434 (38692444) + MamGypLTR3 LTR/Gypsy 574 748 (91) 3282562 477 31.4 4.0 0.0 chr13 77112686 77112860 (38057018) C LTR81A LTR/Gypsy (1136) 214 33 3283392 303 34.1 2.9 0.0 chr13 77124437 77124574 (38045304) + MamGypLTR1c LTR/Gypsy 46 187 (616) 3283408 288 29.9 7.2 3.3 chr13 77277376 77277527 (37892351) + MamGyp-int LTR/Gypsy 555 712 (4350) 3283613 990 34.2 4.9 2.2 chr13 77280859 77281349 (37888529) + MamGyp-int LTR/Gypsy 3904 4407 (655) 3283613 238 32.6 5.1 0.0 chr13 77484917 77485014 (37684864) + MamGypLTR2b LTR/Gypsy 501 603 (319) 3283919 275 25.3 1.3 1.3 chr13 77485092 77485167 (37684711) + MamGypLTR2b LTR/Gypsy 756 831 (91) 3283919 343 29.5 16.7 1.2 chr13 77497256 77497423 (37672455) + MamGypLTR2c LTR/Gypsy 131 324 (744) 3283944 311 27.1 3.6 5.0 chr13 77497844 77497983 (37671895) + MamGypLTR2c LTR/Gypsy 785 922 (0) 3283944 286 32.3 5.8 4.7 chr13 78435606 78435777 (36734101) + LTR81A LTR/Gypsy 46 219 (1131) 3285303 401 27.9 8.7 3.9 chr13 79046116 79046439 (36123439) + LTR81AB LTR/Gypsy 4 331 (1019) 3286114 330 27.4 6.5 5.7 chr13 79583341 79583464 (35586414) C MamGypLTR2b LTR/Gypsy (0) 922 798 3286823 243 27.8 14.3 5.3 chr13 79613863 79613995 (35555883) C LTR81C LTR/Gypsy (869) 284 140 3286855 253 17.2 4.5 3.0 chr13 79614070 79614135 (35555743) C LTR81B LTR/Gypsy (1197) 196 130 3286856 239 20.9 0.0 0.0 chr13 79803599 79803641 (35366237) + LTR81A LTR/Gypsy 1308 1350 (0) 3287141 274 30.4 18.9 5.6 chr13 80149701 80150038 (35019840) + MamGypLTR2b LTR/Gypsy 498 880 (42) 3287643 788 30.8 12.8 7.8 chr13 80475404 80476130 (34693748) C LTR81C LTR/Gypsy (65) 1088 326 3288032 441 34.5 12.7 1.0 chr13 80604087 80604385 (34565493) C MamGypLTR1c LTR/Gypsy (0) 803 470 3288159 226 29.9 13.8 0.0 chr13 80604397 80604483 (34565395) C MamGypLTR1c LTR/Gypsy (306) 497 399 3288159 265 32.4 8.4 1.1 chr13 80650214 80650391 (34519487) + MamGypLTR1a LTR/Gypsy 427 617 (167) 3288219 236 13.3 12.0 9.8 chr13 80702619 80702710 (34467168) C LTR81AB LTR/Gypsy (176) 102 9 3288294 294 38.0 2.6 3.9 chr13 81781511 81781666 (33388212) + MamGypLTR1b LTR/Gypsy 329 482 (302) 3289757 353 35.3 3.4 3.4 chr13 81781666 81781844 (33388034) + MamGypLTR1b LTR/Gypsy 598 776 (6) 3289757 227 28.9 6.5 2.2 chr13 82199363 82199454 (32970424) C MamGypLTR1a LTR/Gypsy (336) 446 351 3290305 396 29.0 3.5 2.3 chr13 82200277 82200449 (32969429) C MamGypLTR1a LTR/Gypsy (563) 221 47 3290305 262 23.6 9.1 3.6 chr13 82811105 82811214 (32358664) C LTR81C LTR/Gypsy (643) 510 395 3291105 373 31.7 4.3 2.2 chr13 84806966 84807149 (30362729) C LTR81B LTR/Gypsy (1111) 282 95 3293791 295 38.0 1.6 1.6 chr13 86397073 86397195 (28772683) + LTR81A LTR/Gypsy 881 1003 (347) 3296017 233 33.3 0.0 2.9 chr13 87440545 87440612 (27729266) C MamGypLTR3 LTR/Gypsy (191) 648 583 3297218 509 36.5 12.5 3.3 chr13 88429562 88430215 (26739663) C LTR81A LTR/Gypsy (168) 1182 306 3298623 281 34.4 1.5 0.8 chr13 88863669 88863800 (26306078) + MamGypLTR1a LTR/Gypsy 98 230 (554) 3299218 392 25.4 3.2 10.4 chr13 89130600 89130819 (26039059) C MamGypLTR1d LTR/Gypsy (605) 208 5 3299602 242 31.2 2.6 0.9 chr13 89187794 89187906 (25981972) C LTR81AB LTR/Gypsy (161) 117 3 3299667 481 34.5 6.6 2.5 chr13 90671107 90671350 (24498528) C MamGypLTR3 LTR/Gypsy (0) 839 586 3301770 299 27.5 8.2 0.9 chr13 90768274 90768383 (24401495) C MamGypLTR1d LTR/Gypsy (16) 797 680 3301902 316 31.0 6.4 7.5 chr13 91227351 91227538 (23942340) C MamGyp-int LTR/Gypsy (1182) 3880 3695 3302494 511 27.6 8.2 7.3 chr13 91442532 91442886 (23726992) + LTR81B LTR/Gypsy 7 356 (1037) 3302793 236 38.3 19.7 0.4 chr13 91442955 91443208 (23726670) + LTR81B LTR/Gypsy 759 1061 (332) 3302794 233 41.3 5.0 1.4 chr13 91658375 91658595 (23511283) C MamGypLTR2c LTR/Gypsy (714) 354 126 3303063 273 34.5 7.6 5.0 chr13 91685025 91685262 (23484616) + MamGyp-int LTR/Gypsy 4100 4343 (719) 3303098 275 31.3 3.9 3.5 chr13 91777279 91777433 (23392445) C LTR81A LTR/Gypsy (1059) 334 178 3303236 294 33.3 1.7 3.3 chr13 92911389 92911568 (22258310) C MamGypLTR2c LTR/Gypsy (69) 999 823 3304790 479 23.1 6.7 5.7 chr13 92959876 92960068 (22209810) C MamGypLTR1d LTR/Gypsy (612) 201 7 3304840 228 26.6 3.4 6.8 chr13 93243436 93243552 (21926326) C LTR81C LTR/Gypsy (186) 967 855 3305208 513 28.0 14.0 4.1 chr13 93479416 93479758 (21690120) + LTR81B LTR/Gypsy 102 478 (915) 3305499 304 22.9 6.0 6.7 chr13 93587018 93587167 (21582711) C LTR81B LTR/Gypsy (34) 1359 1211 3305639 723 30.1 6.8 1.6 chr13 93638614 93638695 (21531183) + MamGypLTR1c LTR/Gypsy 477 566 (237) 3305725 723 30.1 6.8 1.6 chr13 93639358 93639585 (21530293) + MamGypLTR1c LTR/Gypsy 567 803 (0) 3305725 428 23.8 2.2 3.0 chr13 93798760 93798893 (21370985) C MamGypLTR1a LTR/Gypsy (17) 767 635 3305946 336 32.8 11.4 6.0 chr13 93802586 93802919 (21366959) + MamGypLTR3 LTR/Gypsy 155 506 (333) 3305950 715 34.1 5.9 3.8 chr13 93816321 93816793 (21353085) C MamGyp-int LTR/Gypsy (4462) 600 118 3305972 542 27.1 1.3 2.5 chr13 93869010 93869168 (21300710) + MamGypLTR2b LTR/Gypsy 751 907 (15) 3306045 327 21.4 8.3 4.6 chr13 93902147 93902254 (21267624) C LTR81B LTR/Gypsy (56) 1337 1226 3306077 251 28.4 2.5 0.0 chr13 93903458 93903538 (21266340) C LTR81AB LTR/Gypsy (913) 240 158 3306080 306 25.2 4.8 5.7 chr13 93903598 93903702 (21266176) C LTR81AB LTR/Gypsy (174) 104 1 3306080 568 32.1 8.0 0.7 chr13 95079826 95080101 (20089777) + MamGypLTR3 LTR/Gypsy 543 838 (1) 3307685 655 30.6 1.8 0.0 chr13 95338886 95339055 (19830823) + MamGyp-int LTR/Gypsy 4044 4216 (846) 3308098 249 26.2 0.0 0.0 chr13 95428866 95428945 (19740933) + LTR81B LTR/Gypsy 1095 1174 (219) 3308242 268 21.4 11.9 3.0 chr13 95463062 95463162 (19706716) C MamGypLTR2b LTR/Gypsy (32) 890 781 3308306 310 31.6 5.5 3.4 chr13 95463562 95463904 (19705974) C MamGypLTR2b LTR/Gypsy (696) 372 16 3308307 330 19.6 5.4 0.0 chr13 95538625 95538716 (19631162) C MamGypLTR1c LTR/Gypsy (0) 803 707 3308405 272 34.0 11.5 3.1 chr13 95970063 95970253 (19199625) C MamGypLTR3 LTR/Gypsy (475) 364 158 3309121 297 27.1 6.5 2.6 chr13 96737318 96737472 (18432406) + MamGypLTR2c LTR/Gypsy 777 937 (131) 3310374 717 33.0 5.3 6.1 chr13 97144986 97145362 (18024516) C MamGypLTR3 LTR/Gypsy (93) 746 373 3310970 303 24.5 8.2 3.1 chr13 97584168 97584264 (17585614) + MamGypLTR3 LTR/Gypsy 594 695 (144) 3311519 632 26.5 9.8 3.4 chr13 97729408 97729647 (17440231) C MamGypLTR1a LTR/Gypsy (510) 272 15 3311731 339 28.2 13.2 12.2 chr13 98301289 98301992 (16867886) + MamGypLTR1d LTR/Gypsy 42 752 (61) 3312537 278 6.4 0.0 6.5 chr13 98433730 98433786 (16736092) + MamGypLTR1b LTR/Gypsy 1 53 (760) 3312732 369 35.1 7.6 0.0 chr13 98509293 98509463 (16660415) + MamGypLTR3 LTR/Gypsy 562 745 (94) 3312850 276 27.2 4.9 6.6 chr13 98713009 98713053 (16456825) C MamGypLTR1a LTR/Gypsy (659) 125 80 3313251 276 27.2 4.9 6.6 chr13 98713841 98713916 (16455962) C MamGypLTR1a LTR/Gypsy (705) 79 6 3313251 657 30.2 15.3 3.6 chr13 98763439 98764002 (16405876) C LTR81B LTR/Gypsy (310) 1083 405 3313364 270 31.5 12.7 2.4 chr13 98782778 98782943 (16386935) + MamGypLTR1a LTR/Gypsy 167 349 (435) 3313407 227 32.3 13.2 5.8 chr13 98783047 98783220 (16386658) + MamGypLTR1a LTR/Gypsy 602 788 (25) 3313407 500 21.6 6.5 3.9 chr13 99270293 99270446 (15899432) C MamGypLTR1b LTR/Gypsy (0) 782 625 3314144 261 35.9 11.5 2.8 chr13 99342127 99342378 (15827500) + MamGypLTR1b LTR/Gypsy 430 703 (79) 3314295 248 30.5 5.1 0.0 chr13 99531427 99531544 (15638334) + LTR81A LTR/Gypsy 907 1030 (320) 3314560 443 34.6 1.6 6.4 chr13 99828424 99828673 (15341205) + MamGyp-int LTR/Gypsy 4208 4445 (617) 3315034 228 20.4 7.1 3.6 chr13 100044720 100044775 (15125103) C LTR81C LTR/Gypsy (851) 302 245 3315369 236 20.0 2.2 0.0 chr13 100760247 100760291 (14409587) + MamGypLTR3 LTR/Gypsy 140 185 (654) 3316578 472 24.3 9.5 5.5 chr13 101075826 101076025 (14093853) C LTR81A LTR/Gypsy (0) 1350 1143 3317084 458 30.6 2.1 2.1 chr13 101076717 101076903 (14092975) C LTR81A LTR/Gypsy (659) 691 505 3317084 320 33.9 4.2 5.2 chr13 101349979 101350171 (13819707) + MamGypLTR3 LTR/Gypsy 649 839 (0) 3317490 497 32.8 10.1 0.8 chr13 101373925 101374182 (13795696) + MamGypLTR1c LTR/Gypsy 512 793 (10) 3317526 453 35.0 13.9 0.9 chr13 101388575 101388906 (13780972) C MamGypLTR1b LTR/Gypsy (61) 721 347 3317553 397 28.9 4.1 2.4 chr13 101831732 101831901 (13337977) C MamGypLTR2c LTR/Gypsy (18) 1050 878 3318155 648 22.0 7.9 2.8 chr13 102145069 102145246 (13024632) C LTR81B LTR/Gypsy (1103) 290 104 3318599 254 28.7 1.5 18.0 chr13 102203122 102203321 (12966557) C LTR81B LTR/Gypsy (32) 1361 1195 3318661 373 22.6 7.9 5.0 chr13 102822507 102822646 (12347232) C LTR81A LTR/Gypsy (1034) 316 173 3319485 241 8.3 20.8 0.0 chr13 103109848 103109895 (12059983) + MamGypLTR3 LTR/Gypsy 557 614 (225) 3319862 243 21.0 8.1 0.0 chr13 103110128 103110189 (12059689) + MamGypLTR3 LTR/Gypsy 773 839 (0) 3319862 228 29.9 8.4 8.4 chr13 103374761 103374975 (11794903) + MamGypLTR1b LTR/Gypsy 1 215 (567) 3320234 1001 29.8 12.3 4.9 chr13 103653191 103653907 (11515971) + MamGypLTR1c LTR/Gypsy 23 792 (11) 3320625 248 31.1 3.2 6.3 chr13 104126423 104126580 (11043298) C MamGypLTR1d LTR/Gypsy (0) 813 661 3321222 518 34.0 5.4 5.4 chr13 104197571 104197832 (10972046) C LTR81B LTR/Gypsy (309) 1084 822 3321318 518 34.0 5.4 5.4 chr13 104198148 104198220 (10971658) C LTR81B LTR/Gypsy (572) 821 749 3321318 233 29.8 5.0 5.0 chr13 104411515 104411613 (10758265) + MamGypLTR2c LTR/Gypsy 767 865 (203) 3321609 271 30.3 8.2 3.3 chr13 104543351 104543534 (10626344) C LTR81C LTR/Gypsy (0) 1153 961 3321762 235 20.9 0.0 2.9 chr13 104825773 104825841 (10344037) C MamGypLTR1a LTR/Gypsy (10) 774 708 3322165 392 35.5 5.2 0.9 chr13 105033326 105033538 (10136340) C LTR81A LTR/Gypsy (596) 754 533 3322413 467 35.5 6.0 1.2 chr13 105230690 105230940 (9938938) C MamGypLTR2c LTR/Gypsy (604) 464 202 3322687 335 36.1 8.1 2.6 chr13 105340921 105341230 (9828648) C MamGypLTR3 LTR/Gypsy (479) 360 34 3322843 266 31.4 14.4 0.6 chr13 105939990 105940149 (9229729) + MamGypLTR2c LTR/Gypsy 313 494 (574) 3323606 242 24.1 1.2 2.5 chr13 105985743 105985823 (9184055) C MamGypLTR1d LTR/Gypsy (3) 810 731 3323666 318 35.5 4.2 2.5 chr13 106726657 106726942 (8442936) C MamGypLTR1a LTR/Gypsy (84) 700 410 3324671 325 31.7 13.7 5.7 chr13 106754256 106754665 (8415213) + MamGypLTR1c LTR/Gypsy 238 689 (114) 3324713 325 31.7 13.7 5.7 chr13 106755043 106755143 (8414735) + MamGypLTR1c LTR/Gypsy 690 790 (13) 3324713 335 27.0 12.5 1.7 chr13 106888335 106888454 (8281424) C LTR81 LTR/Gypsy (28) 1161 993 3324890 342 31.5 1.7 2.3 chr13 106967674 106967845 (8202033) C LTR81B LTR/Gypsy (1090) 303 133 3324994 247 18.4 4.5 2.2 chr13 107437763 107437851 (7732027) C LTR81A LTR/Gypsy (131) 1219 1129 3325600 332 28.9 8.5 0.8 chr13 107445855 107445983 (7723895) C MamGypLTR2c LTR/Gypsy (636) 432 294 3325618 269 27.5 6.8 1.5 chr13 107455258 107455390 (7714488) + MamGypLTR1a LTR/Gypsy 43 182 (602) 3325630 357 34.1 7.8 5.3 chr13 108165707 108166065 (7003813) + MamGypLTR1b LTR/Gypsy 29 396 (386) 3326594 279 31.7 5.9 0.0 chr13 108571102 108571202 (6598676) + MamGypLTR1d LTR/Gypsy 707 813 (0) 3327120 283 33.3 12.9 2.5 chr13 108586076 108586401 (6583477) + LTR81B LTR/Gypsy 976 1335 (58) 3327135 244 29.0 0.0 0.0 chr13 108586435 108586496 (6583382) + LTR81 LTR/Gypsy 1119 1180 (9) 3327137 344 19.2 16.3 2.4 chr13 108670919 108671041 (6498837) C LTR81B LTR/Gypsy (1181) 212 73 3327219 330 27.4 27.0 4.5 chr13 108695665 108695773 (6474105) C MamGypLTR1d LTR/Gypsy (55) 758 612 3327258 330 27.4 27.0 4.5 chr13 108696201 108696312 (6473566) C MamGypLTR1d LTR/Gypsy (202) 611 487 3327258 276 14.8 15.4 11.0 chr13 109054845 109054935 (6114943) C MamGypLTR1a LTR/Gypsy (0) 813 719 3327734 432 25.9 10.4 11.0 chr13 109055258 109055583 (6114295) C MamGypLTR1a LTR/Gypsy (460) 324 1 3327734 409 19.7 0.0 0.0 chr13 109387386 109387461 (5782417) + LTR81A LTR/Gypsy 180 255 (1095) 3328183 259 23.3 14.4 1.0 chr13 110068191 110068294 (5101584) + LTR81B LTR/Gypsy 70 187 (1206) 3329032 517 31.2 3.8 6.9 chr13 110357062 110357378 (4812500) C LTR81A LTR/Gypsy (1040) 310 4 3329401 253 33.1 4.1 2.1 chr13 111507106 111507250 (3662628) C MamGypLTR1a LTR/Gypsy (8) 776 629 3330798 277 25.9 12.8 1.4 chr13 111507272 111507412 (3662466) C MamGypLTR1a LTR/Gypsy (235) 549 393 3330798 229 16.7 7.0 5.3 chr13 111612908 111612964 (3556914) C MamGypLTR1c LTR/Gypsy (593) 210 153 3330923 280 20.0 1.8 0.0 chr13 111730582 111730636 (3439242) C MamGypLTR2b LTR/Gypsy (14) 908 853 3331060 228 33.3 1.0 1.9 chr13 112124850 112124953 (3044925) + MamGypLTR2c LTR/Gypsy 910 1012 (56) 3331476 342 32.7 7.8 0.7 chr13 114208649 114208802 (961076) + MamGypLTR1b LTR/Gypsy 617 781 (1) 3333642 254 25.3 6.7 0.0 chr13 114446366 114446440 (723438) + MamGypLTR1d LTR/Gypsy 154 233 (580) 3333759 403 22.6 6.6 8.8 chr13 114998416 114998551 (171327) C MamGypLTR1d LTR/Gypsy (680) 133 1 3334183 236 34.5 6.2 9.3 chr14 19118516 19118838 (88230702) C MamGypLTR3 LTR/Gypsy (30) 809 497 3334455 425 33.7 3.4 5.2 chr14 19563818 19564086 (87785454) C MamGypLTR3 LTR/Gypsy (30) 809 546 3334891 346 33.7 3.4 5.2 chr14 20009558 20009826 (87339714) + MamGypLTR3 LTR/Gypsy 546 809 (30) 3335368 544 26.7 7.8 5.1 chr14 21325527 21325893 (86023647) + MamGypLTR1a LTR/Gypsy 1 481 (303) 3337216 235 20.8 0.0 0.0 chr14 22076638 22076685 (85272855) C LTR81 LTR/Gypsy (7) 1182 1135 3338537 934 31.3 9.6 7.7 chr14 22078655 22079236 (85270304) C LTR81A LTR/Gypsy (745) 605 13 3338544 243 36.9 2.8 0.0 chr14 22185390 22185530 (85164010) + MamGypLTR1c LTR/Gypsy 598 742 (61) 3338693 241 36.4 5.3 1.5 chr14 22515169 22515299 (84834241) C MamGypLTR1d LTR/Gypsy (608) 205 70 3339078 426 32.4 10.7 3.2 chr14 22608014 22608386 (84741154) + MamGypLTR1a LTR/Gypsy 23 423 (361) 3339207 1680 33.6 9.0 3.1 chr14 22757573 22758682 (84590858) C LTR81A LTR/Gypsy (174) 1176 1 3339390 317 24.5 9.6 3.5 chr14 22800592 22800790 (84548750) + MamGypLTR2b LTR/Gypsy 682 892 (30) 3339452 427 33.5 8.3 10.7 chr14 23159607 23160279 (84189261) C MamGypLTR1c LTR/Gypsy (3) 800 39 3339901 436 26.6 2.8 2.1 chr14 24335834 24335975 (83013565) + MamGypLTR2b LTR/Gypsy 776 918 (4) 3341759 574 33.6 16.0 4.3 chr14 24925470 24926046 (82423494) C MamGypLTR2c LTR/Gypsy (0) 1068 416 3342540 574 33.6 16.0 4.3 chr14 24926598 24926915 (82422625) C MamGypLTR2c LTR/Gypsy (653) 415 69 3342540 306 26.6 13.3 3.9 chr14 25097659 25097838 (82251702) + MamGypLTR1a LTR/Gypsy 1 197 (587) 3342717 383 34.0 5.7 4.3 chr14 25137684 25137984 (82211556) + MamGypLTR1c LTR/Gypsy 457 761 (42) 3342757 839 29.9 16.6 3.1 chr14 25246715 25247100 (82102440) + MamGypLTR1b LTR/Gypsy 336 773 (9) 3342889 981 31.7 9.5 3.0 chr14 25601792 25602467 (81747073) + MamGypLTR3 LTR/Gypsy 108 827 (12) 3343385 278 33.8 6.3 2.1 chr14 26070797 26070938 (81278602) + LTR81B LTR/Gypsy 696 843 (550) 3343974 539 29.5 13.3 4.3 chr14 26275168 26275514 (81074026) C MamGypLTR2c LTR/Gypsy (18) 1050 673 3344242 266 45.5 0.7 2.7 chr14 26275522 26275668 (81073872) + MamGypLTR2c LTR/Gypsy 272 415 (653) 3344243 322 32.1 9.9 1.9 chr14 26276222 26276383 (81073157) C MamGypLTR2c LTR/Gypsy (797) 271 97 3344242 228 25.7 5.1 6.3 chr14 26527121 26527199 (80822341) + LTR81C LTR/Gypsy 52 129 (1024) 3344524 271 33.1 6.2 4.6 chr14 26527883 26528012 (80821528) + LTR81B LTR/Gypsy 1061 1192 (201) 3344525 238 23.9 16.1 1.9 chr14 26795415 26795576 (80553964) C LTR81B LTR/Gypsy (4) 1389 1205 3344866 242 27.8 4.5 1.8 chr14 27291884 27291993 (80057547) + MamGypLTR2b LTR/Gypsy 783 895 (27) 3345547 272 21.9 0.0 7.6 chr14 28091356 28091434 (79258106) + LTR81B LTR/Gypsy 1126 1198 (195) 3346521 228 27.7 3.6 1.2 chr14 28154895 28154978 (79194562) + LTR81B LTR/Gypsy 166 251 (1142) 3346599 756 34.3 7.3 4.4 chr14 28526970 28527445 (78822095) C MamGypLTR1d LTR/Gypsy (0) 813 314 3347095 406 33.3 6.2 3.1 chr14 28530109 28530334 (78819206) C LTR81C LTR/Gypsy (135) 1018 786 3347099 321 23.8 3.8 0.9 chr14 28531634 28531739 (78817801) C LTR81AB LTR/Gypsy (16) 262 154 3347101 427 27.6 11.2 2.2 chr14 29090599 29090776 (78258764) + MamGypLTR1a LTR/Gypsy 5 198 (586) 3347797 369 33.0 12.9 1.7 chr14 29090986 29091225 (78258315) + MamGypLTR1a LTR/Gypsy 506 772 (10) 3347797 255 21.9 2.7 2.7 chr14 29143450 29143524 (78206016) + LTR81C LTR/Gypsy 893 967 (186) 3347856 278 34.8 1.3 11.5 chr14 29198182 29198337 (78151203) + MamGypLTR1a LTR/Gypsy 377 516 (268) 3347939 301 23.0 6.7 4.8 chr14 29333648 29333752 (78015788) C LTR81B LTR/Gypsy (1282) 111 5 3348131 238 36.8 11.4 1.9 chr14 29355629 29355786 (77993754) C LTR81C LTR/Gypsy (398) 755 583 3348165 294 36.8 6.9 3.1 chr14 29358103 29358363 (77991177) C LTR81C LTR/Gypsy (876) 277 7 3348165 230 26.8 6.0 8.2 chr14 29913932 29914065 (77435475) + LTR81A LTR/Gypsy 732 862 (488) 3348830 321 32.1 0.8 11.4 chr14 29914257 29914502 (77435038) + MamGypLTR2b LTR/Gypsy 656 875 (47) 3348831 264 37.1 1.5 1.5 chr14 30458251 30458384 (76891156) C MamGypLTR1d LTR/Gypsy (244) 569 436 3349570 375 30.9 9.5 1.1 chr14 30465424 30465613 (76883927) C MamGypLTR1c LTR/Gypsy (586) 217 12 3349586 427 36.4 11.1 1.5 chr14 30526238 30526569 (76822971) + MamGypLTR1c LTR/Gypsy 345 708 (95) 3349665 359 32.3 16.5 2.6 chr14 31940226 31940419 (75409121) + MamGypLTR1a LTR/Gypsy 331 551 (233) 3352016 297 18.9 0.0 7.5 chr14 32004010 32004045 (75345495) + MamGypLTR2b LTR/Gypsy 813 846 (76) 3352134 297 18.9 0.0 7.5 chr14 32004352 32004394 (75345146) + MamGypLTR2b LTR/Gypsy 847 886 (36) 3352134 630 29.7 4.2 10.2 chr14 32398473 32398806 (74950734) C MamGypLTR3 LTR/Gypsy (30) 809 496 3352694 394 28.1 9.6 2.5 chr14 33162148 33162348 (74187192) C LTR81 LTR/Gypsy (196) 1197 813 3353760 400 32.5 12.2 3.0 chr14 33162821 33163083 (74186457) C LTR81 LTR/Gypsy (884) 305 19 3353760 267 27.6 1.9 2.8 chr14 33359887 33359994 (73989546) C MamGypLTR1b LTR/Gypsy (0) 782 676 3353974 257 20.3 11.8 9.0 chr14 33360657 33360703 (73988837) C MamGypLTR1b LTR/Gypsy (710) 93 51 3353974 257 17.9 0.0 0.0 chr14 33360974 33361022 (73988518) C MamGypLTR1b LTR/Gypsy (732) 50 2 3353974 714 29.2 29.6 5.0 chr14 34329306 34329754 (73019786) C MamGypLTR1a LTR/Gypsy (0) 784 203 3355067 714 31.0 12.2 6.2 chr14 34330283 34330493 (73019047) C MamGypLTR1a LTR/Gypsy (582) 202 1 3355067 420 28.7 8.4 5.7 chr14 34447707 34448008 (72901532) + LTR81AB LTR/Gypsy 4 317 (1033) 3355231 327 26.2 11.7 8.0 chr14 34715900 34716061 (72633479) C MamGypLTR2c LTR/Gypsy (1) 1067 900 3355649 260 22.8 7.3 4.2 chr14 35117605 35117700 (72231840) + LTR81AB LTR/Gypsy 18 116 (162) 3356520 292 31.5 10.0 7.8 chr14 35822456 35822786 (71526754) + MamGypLTR1d LTR/Gypsy 108 445 (368) 3358014 567 33.1 9.3 11.9 chr14 35933879 35934171 (71415369) + MamGypLTR1c LTR/Gypsy 8 276 (527) 3358232 567 33.1 9.3 11.9 chr14 35934210 35934280 (71415260) + MamGypLTR1c LTR/Gypsy 277 332 (471) 3358232 567 33.1 9.3 11.9 chr14 35934966 35935320 (71414220) + MamGypLTR1c LTR/Gypsy 333 708 (95) 3358232 314 26.7 19.9 0.7 chr14 37896860 37896995 (69452545) + MamGypLTR1c LTR/Gypsy 611 772 (31) 3361014 242 22.1 5.5 0.2 chr14 38118124 38118190 (69231350) C MamGypLTR1c LTR/Gypsy (0) 813 723 3361283 334 36.1 5.7 6.8 chr14 38118317 38118595 (69230945) C MamGypLTR1c LTR/Gypsy (238) 565 290 3361283 268 26.6 28.6 3.4 chr14 38347689 38347863 (69001677) + MamGypLTR2c LTR/Gypsy 816 1034 (34) 3361570 292 28.6 8.4 7.8 chr14 38551317 38551483 (68798057) + MamGypLTR1c LTR/Gypsy 3 170 (633) 3361855 227 34.3 1.4 0.0 chr14 38658764 38658833 (68690707) C MamGypLTR1a LTR/Gypsy (183) 601 531 3362006 261 32.7 9.5 0.6 chr14 38714241 38714409 (68635131) C MamGypLTR2c LTR/Gypsy (106) 962 779 3362066 247 27.7 5.3 1.1 chr14 38972321 38972415 (68377125) C MamGypLTR1a LTR/Gypsy (0) 784 686 3362350 355 37.8 12.1 0.4 chr14 38972438 38972676 (68376864) C MamGypLTR1a LTR/Gypsy (149) 635 369 3362350 447 33.0 8.8 4.8 chr14 39440460 39440936 (67908604) C MamGypLTR2c LTR/Gypsy (120) 948 453 3362913 240 34.3 0.9 1.9 chr14 39441072 39441178 (67908362) C MamGypLTR2c LTR/Gypsy (947) 121 16 3362913 271 33.0 15.9 2.4 chr14 39957755 39957962 (67391578) C LTR81B LTR/Gypsy (145) 1248 1013 3363821 269 40.4 6.4 2.1 chr14 40236522 40236756 (67112784) C MamGypLTR1b LTR/Gypsy (63) 719 475 3364153 241 19.6 1.8 1.8 chr14 40685089 40685145 (66664395) + MamGypLTR2b LTR/Gypsy 851 907 (15) 3364663 396 31.0 17.8 4.6 chr14 40778772 40779052 (66570488) + LTR81C LTR/Gypsy 716 1033 (120) 3364760 299 13.8 11.6 7.0 chr14 40963569 40963654 (66385886) C LTR81C LTR/Gypsy (7) 1146 1057 3364973 272 34.4 10.2 2.3 chr14 41133509 41133636 (66215904) C MamGypLTR1a LTR/Gypsy (202) 582 445 3365201 241 30.9 1.2 2.4 chr14 41226298 41226380 (66123160) C LTR81B LTR/Gypsy (45) 1348 1267 3365307 433 29.9 0.9 1.6 chr14 41727450 41727593 (65621947) C LTR81C LTR/Gypsy (562) 591 472 3365981 357 37.5 8.8 1.2 chr14 41810206 41810375 (65539165) + MamGyp-int LTR/Gypsy 4577 4759 (303) 3366073 596 35.6 7.2 0.5 chr14 41817804 41818176 (65531364) C MamGyp-int LTR/Gypsy (4625) 437 40 3366087 287 28.7 3.7 8.5 chr14 41820404 41820567 (65528973) C LTR81C LTR/Gypsy (132) 1021 866 3366091 358 39.1 5.2 2.6 chr14 43326579 43326846 (64022694) C MamGypLTR1b LTR/Gypsy (124) 658 384 3368003 430 25.2 5.2 0.0 chr14 43327066 43327180 (64022360) C MamGypLTR1b LTR/Gypsy (661) 121 1 3368004 485 34.7 29.1 3.1 chr14 44336684 44337047 (63012493) C MamGypLTR1a LTR/Gypsy (29) 774 324 3369315 485 36.8 13.8 3.9 chr14 44337076 44337300 (63012240) C MamGypLTR1a LTR/Gypsy (461) 323 69 3369315 517 36.6 14.6 2.1 chr14 44418460 44418944 (62930596) C LTR81B LTR/Gypsy (172) 1221 676 3369413 339 33.1 1.6 3.9 chr14 44419249 44419430 (62930110) C LTR81B LTR/Gypsy (975) 178 1 3369413 591 33.1 9.1 8.0 chr14 45078463 45079099 (62270441) + MamGypLTR1c LTR/Gypsy 3 646 (157) 3370259 408 31.9 8.2 6.5 chr14 45079094 45079385 (62270155) C MamGypLTR1c LTR/Gypsy (506) 297 1 3370260 277 10.6 2.1 0.0 chr14 45095215 45095261 (62254279) + LTR81A LTR/Gypsy 240 287 (1063) 3370281 583 28.1 3.6 2.0 chr14 45096738 45096933 (62252607) + LTR81C LTR/Gypsy 895 1093 (60) 3370284 287 15.2 4.4 2.9 chr14 45099369 45099436 (62250104) + LTR81C LTR/Gypsy 1121 1189 (0) 3370284 444 31.3 14.2 4.9 chr14 45281794 45282223 (62067317) C MamGypLTR1c LTR/Gypsy (0) 803 334 3370511 444 35.1 6.6 0.6 chr14 45704437 45704602 (61644938) C LTR81B LTR/Gypsy (582) 811 636 3371196 346 36.0 8.4 6.1 chr14 45741289 45741584 (61607956) C LTR81B LTR/Gypsy (462) 931 629 3371266 813 30.0 10.0 5.2 chr14 45741774 45741971 (61607569) C LTR81B LTR/Gypsy (813) 580 384 3371266 813 30.0 10.0 5.2 chr14 45742455 45742776 (61606764) C LTR81B LTR/Gypsy (1010) 383 35 3371266 1036 30.9 15.1 6.4 chr14 45896598 45897268 (61452272) + MamGypLTR1c LTR/Gypsy 72 800 (3) 3371474 234 29.4 0.0 0.0 chr14 46477398 46477465 (60872075) C LTR81 LTR/Gypsy (43) 1307 1240 3372120 403 34.6 7.7 7.9 chr14 46477723 46478177 (60871363) C LTR81 LTR/Gypsy (731) 458 5 3372120 276 31.5 3.6 11.4 chr14 46964264 46964571 (60384969) C LTR81C LTR/Gypsy (0) 1153 870 3372722 435 31.8 3.1 2.5 chr14 46964766 46965016 (60384524) C LTR81C LTR/Gypsy (587) 763 312 3372722 444 30.1 2.6 2.1 chr14 47243058 47243247 (60106293) + MamGypLTR2c LTR/Gypsy 872 1062 (6) 3373107 319 29.6 9.9 3.8 chr14 48150070 48150280 (59199260) C MamGypLTR2c LTR/Gypsy (11) 1057 834 3374296 238 36.1 5.0 0.0 chr14 48150422 48150540 (59199000) C LTR81A LTR/Gypsy (520) 830 706 3374297 355 29.5 5.0 3.9 chr14 48150783 48150962 (59198578) C MamGypLTR2c LTR/Gypsy (884) 184 3 3374296 292 36.9 7.2 3.7 chr14 48381534 48381882 (58967658) + MamGyp-int LTR/Gypsy 1515 1875 (3187) 3374589 362 28.8 5.8 8.9 chr14 48917945 48918169 (58431371) + MamGypLTR1c LTR/Gypsy 1 218 (585) 3375217 268 27.1 5.3 0.9 chr14 49154567 49154673 (58194867) + LTR81A LTR/Gypsy 227 336 (1057) 3375476 454 36.9 6.5 0.5 chr14 49155779 49156025 (58193515) + LTR81C LTR/Gypsy 755 1179 (171) 3375479 268 28.8 4.1 4.6 chr14 49239369 49239509 (58110031) + LTR81A LTR/Gypsy 1220 1344 (6) 3375576 250 38.6 4.5 1.1 chr14 49337279 49337456 (58012084) + MamGypLTR2c LTR/Gypsy 300 483 (585) 3375700 283 31.4 8.3 7.3 chr14 49391561 49391862 (57957678) C LTR81B LTR/Gypsy (38) 1355 1051 3375786 289 25.9 8.6 3.3 chr14 49392225 49392376 (57957164) C LTR81B LTR/Gypsy (1159) 234 75 3375786 942 29.8 19.7 3.9 chr14 49431737 49432020 (57917520) C MamGypLTR2c LTR/Gypsy (25) 1043 722 3375835 942 29.8 19.7 3.9 chr14 49432141 49432749 (57916791) C MamGypLTR2c LTR/Gypsy (347) 721 10 3375835 288 20.7 8.4 1.2 chr14 49488242 49488324 (57861216) C MamGypLTR1c LTR/Gypsy (1) 802 714 3375899 578 33.9 9.0 4.6 chr14 49488380 49488926 (57860614) C MamGypLTR1c LTR/Gypsy (173) 609 48 3375899 533 22.9 10.3 3.1 chr14 49691079 49691272 (57658268) + LTR81B LTR/Gypsy 13 220 (1173) 3376141 560 29.8 20.0 4.3 chr14 49786634 49787214 (57562326) C MamGypLTR1b LTR/Gypsy (110) 672 1 3376245 359 28.1 14.7 4.4 chr14 49878349 49878664 (57470876) + MamGypLTR1c LTR/Gypsy 205 565 (248) 3376359 1415 31.3 7.9 4.8 chr14 50419788 50420499 (56929041) C MamGypLTR1c LTR/Gypsy (4) 799 66 3377427 317 24.7 0.0 7.2 chr14 50444526 50444608 (56904932) + LTR81A LTR/Gypsy 956 1032 (318) 3377468 292 35.2 1.4 11.6 chr14 50956947 50957084 (56392456) + MamGypLTR3 LTR/Gypsy 260 383 (456) 3378482 229 25.2 6.3 8.4 chr14 51438214 51438356 (55911184) + LTR81A LTR/Gypsy 578 717 (633) 3379191 503 27.4 1.7 1.1 chr14 51751425 51751601 (55597939) + LTR81B LTR/Gypsy 130 307 (1086) 3379632 276 32.6 13.0 2.4 chr14 51752269 51752560 (55596980) + LTR81B LTR/Gypsy 997 1319 (31) 3379632 405 36.2 6.9 3.9 chr14 52687441 52687874 (54661666) + MamGypLTR2c LTR/Gypsy 63 509 (559) 3380954 385 29.9 14.6 2.6 chr14 52688061 52688293 (54661247) + MamGypLTR2c LTR/Gypsy 742 1002 (66) 3380954 313 27.9 10.9 7.2 chr14 52774346 52774538 (54575002) + MamGypLTR1c LTR/Gypsy 1 200 (603) 3381091 625 23.7 10.1 3.4 chr14 52862433 52862771 (54486769) C MamGypLTR1a LTR/Gypsy (398) 384 3 3381203 369 33.0 6.4 4.8 chr14 52864667 52864917 (54484623) + MamGypLTR2c LTR/Gypsy 86 340 (728) 3381206 261 29.2 1.0 3.0 chr14 52865190 52865288 (54484252) + MamGypLTR2c LTR/Gypsy 938 1034 (34) 3381206 330 26.7 7.7 4.7 chr14 52887660 52887828 (54461712) + MamGypLTR3 LTR/Gypsy 295 468 (371) 3381249 227 23.9 11.9 0.0 chr14 53637620 53637686 (53711854) C MamGypLTR1c LTR/Gypsy (728) 75 1 3382439 353 29.7 13.1 0.6 chr14 53707580 53707818 (53641722) C LTR81B LTR/Gypsy (119) 1274 984 3382559 894 33.9 9.8 4.2 chr14 53802100 53802807 (53546733) + LTR81A LTR/Gypsy 18 764 (586) 3382652 233 37.7 18.6 2.2 chr14 53878997 53879357 (53470183) + LTR81A LTR/Gypsy 692 1111 (239) 3382763 411 33.5 8.3 7.4 chr14 54120100 54120518 (53229022) + MamGypLTR2c LTR/Gypsy 303 725 (343) 3383091 230 20.6 6.7 2.7 chr14 54121081 54121155 (53228385) + LTR81A LTR/Gypsy 1250 1327 (23) 3383093 298 30.9 16.4 0.7 chr14 54145017 54145156 (53204384) C MamGypLTR1d LTR/Gypsy (13) 790 629 3383126 350 25.6 17.0 3.3 chr14 54145686 54145867 (53203673) C MamGypLTR1d LTR/Gypsy (604) 209 3 3383126 225 28.1 10.8 0.8 chr14 54203917 54204045 (53145495) + MamGypLTR1b LTR/Gypsy 635 776 (6) 3383223 385 34.2 8.1 1.6 chr14 54368263 54368520 (52981020) C MamGypLTR2c LTR/Gypsy (786) 282 8 3383445 482 30.5 3.9 4.4 chr14 54680772 54680860 (52668680) + LTR81B LTR/Gypsy 67 153 (1240) 3383862 482 30.5 3.9 4.4 chr14 54681151 54681242 (52668298) + LTR81B LTR/Gypsy 154 247 (1146) 3383862 522 31.4 12.1 3.5 chr14 54820046 54820385 (52529155) C MamGypLTR2b LTR/Gypsy (171) 751 383 3384047 286 30.0 5.8 0.8 chr14 54915592 54915712 (52433828) C MamGypLTR1a LTR/Gypsy (54) 728 602 3384187 1103 28.5 7.9 3.2 chr14 54915752 54916182 (52433358) C MamGypLTR1a LTR/Gypsy (332) 452 2 3384187 865 27.5 3.9 2.9 chr14 54971296 54971402 (52378138) + LTR81A LTR/Gypsy 44 151 (1199) 3384268 865 27.9 4.1 2.8 chr14 54971705 54972020 (52377520) + LTR81A LTR/Gypsy 114 431 (919) 3384268 740 33.9 18.5 2.4 chr14 54973454 54974033 (52375507) + LTR81A LTR/Gypsy 523 1196 (154) 3384268 247 23.9 2.8 0.0 chr14 54974734 54974804 (52374736) + LTR81C LTR/Gypsy 1049 1121 (32) 3384276 272 22.8 13.9 0.0 chr14 55385604 55385682 (51963858) + MamGypLTR1b LTR/Gypsy 687 776 (6) 3384895 533 29.7 13.2 7.7 chr14 55674222 55674932 (51674608) + MamGypLTR1c LTR/Gypsy 50 799 (4) 3385471 299 33.1 2.0 3.3 chr14 56023056 56023115 (51326425) C MamGypLTR1c LTR/Gypsy (0) 803 746 3386129 299 33.1 2.0 3.3 chr14 56023194 56023285 (51326255) C MamGypLTR1c LTR/Gypsy (58) 745 653 3386129 562 34.1 9.2 6.8 chr14 56177711 56178223 (51171317) + MamGypLTR2c LTR/Gypsy 44 568 (500) 3386363 242 20.8 2.5 5.6 chr14 56178263 56178367 (51171173) + MamGypLTR2c LTR/Gypsy 780 977 (91) 3386364 304 34.0 1.9 0.0 chr14 56343207 56343312 (51006228) + LTR81B LTR/Gypsy 577 684 (505) 3386619 442 33.0 4.8 6.1 chr14 56343564 56343873 (51005667) + LTR81B LTR/Gypsy 935 1240 (153) 3386619 628 25.8 15.4 8.3 chr14 56348226 56348852 (51000688) C LTR81C LTR/Gypsy (0) 1393 729 3386628 257 32.5 9.7 5.0 chr14 56379500 56379778 (50969762) C MamGypLTR2b LTR/Gypsy (154) 768 477 3386682 271 30.1 19.3 1.5 chr14 56507548 56507749 (50841791) C MamGypLTR1b LTR/Gypsy (56) 726 489 3386852 267 36.8 3.8 1.4 chr14 56857328 56857496 (50492044) + MamGypLTR2c LTR/Gypsy 75 359 (709) 3387272 544 33.0 8.8 7.9 chr14 57032084 57032752 (50316788) + MamGypLTR1b LTR/Gypsy 36 710 (72) 3387512 330 25.6 3.5 11.6 chr14 57928564 57928735 (49420805) + MamGypLTR2c LTR/Gypsy 4 161 (907) 3388836 238 31.0 3.3 6.0 chr14 57931403 57931584 (49417956) + MamGypLTR2c LTR/Gypsy 694 870 (198) 3388843 230 32.6 1.0 4.0 chr14 58222174 58222272 (49127268) + LTR81A LTR/Gypsy 1223 1318 (32) 3389180 975 26.1 8.0 3.2 chr14 58337648 58338197 (49011343) + MamGypLTR1b LTR/Gypsy 124 782 (0) 3389320 440 28.7 11.4 4.4 chr14 58348384 58348729 (49000811) C LTR81B LTR/Gypsy (1) 1392 798 3389338 294 32.5 2.3 3.5 chr14 58349226 58349397 (49000143) C LTR81B LTR/Gypsy (1034) 359 190 3389338 327 22.3 4.2 11.7 chr14 58405287 58405346 (48944194) + LTR81B LTR/Gypsy 22 72 (1321) 3389425 327 22.3 4.2 11.7 chr14 58405503 58405654 (48943886) + LTR81B LTR/Gypsy 73 218 (1175) 3389425 225 30.7 0.0 1.1 chr14 58405691 58405779 (48943761) + LTR81 LTR/Gypsy 162 249 (940) 3389427 372 27.9 12.1 7.7 chr14 58406227 58406549 (48942991) + LTR81 LTR/Gypsy 845 1181 (8) 3389427 571 31.4 11.1 3.2 chr14 59040920 59041288 (48308252) C MamGypLTR1a LTR/Gypsy (386) 398 1 3390501 333 28.1 0.0 2.0 chr14 59146440 59146537 (48203003) + MamGypLTR3 LTR/Gypsy 284 379 (460) 3390658 314 27.8 3.1 11.5 chr14 59517627 59517756 (47831784) + MamGypLTR3 LTR/Gypsy 601 719 (120) 3391189 399 26.7 22.3 5.8 chr14 59601237 59601410 (47748130) + MamGypLTR2c LTR/Gypsy 730 910 (158) 3391302 399 26.7 22.3 5.8 chr14 59601631 59601729 (47747811) + MamGypLTR2c LTR/Gypsy 911 1048 (20) 3391302 276 29.3 0.9 8.3 chr14 59921958 59922065 (47427475) + MamGypLTR1c LTR/Gypsy 336 435 (378) 3391728 285 25.8 28.6 2.1 chr14 59946786 59947019 (47402521) + MamGypLTR1c LTR/Gypsy 62 357 (446) 3391762 241 29.3 10.0 6.2 chr14 60788110 60788269 (46561271) C MamGypLTR2c LTR/Gypsy (165) 903 738 3392863 456 35.0 4.7 2.6 chr14 60788525 60788765 (46560775) C MamGypLTR2c LTR/Gypsy (718) 350 102 3392863 456 35.0 4.7 2.6 chr14 60788972 60789072 (46560468) C MamGypLTR2c LTR/Gypsy (967) 101 1 3392863 646 24.2 13.3 4.7 chr14 61668809 61669103 (45680437) C LTR81C LTR/Gypsy (753) 640 161 3394116 1164 29.7 9.5 2.3 chr14 62070993 62071474 (45278066) C LTR81B LTR/Gypsy (79) 1314 798 3394702 261 35.5 5.8 0.7 chr14 62276377 62276515 (45073025) + MamGypLTR2b LTR/Gypsy 235 380 (542) 3395046 319 30.2 21.5 0.7 chr14 62276614 62276883 (45072657) + MamGypLTR2b LTR/Gypsy 544 869 (53) 3395046 298 28.2 9.4 3.1 chr14 62304908 62305035 (45044505) C MamGypLTR1c LTR/Gypsy (81) 722 587 3395099 259 18.7 6.4 16.5 chr14 62305470 62305578 (45043962) C MamGypLTR1b LTR/Gypsy (684) 98 1 3395100 253 29.5 4.4 1.8 chr14 62362957 62363070 (44986470) C MamGypLTR2c LTR/Gypsy (653) 415 299 3395170 410 17.3 5.7 0.4 chr14 62365664 62365760 (44983780) + MamGypLTR1d LTR/Gypsy 708 791 (22) 3395173 307 23.5 10.4 8.1 chr14 62611657 62611878 (44737662) C LTR81AB LTR/Gypsy (49) 229 3 3395489 468 38.7 7.3 3.6 chr14 62701195 62701942 (44647598) C MamGyp-int LTR/Gypsy (80) 4982 4207 3395582 301 25.6 2.3 1.1 chr14 63401383 63401469 (43948071) + LTR81AB LTR/Gypsy 124 211 (67) 3396400 384 25.8 4.1 12.2 chr14 64256610 64256782 (43092758) + LTR81C LTR/Gypsy 856 1096 (57) 3397931 368 25.1 10.8 6.9 chr14 65099130 65099360 (42250180) C LTR81C LTR/Gypsy (14) 1139 900 3399469 324 32.4 4.1 4.1 chr14 65101184 65101379 (42248161) C LTR81AB LTR/Gypsy (69) 209 14 3399474 269 32.0 3.1 10.4 chr14 65143373 65143564 (42205976) C LTR81C LTR/Gypsy (974) 179 2 3399570 1013 26.9 13.8 7.2 chr14 65721839 65722310 (41627230) C MamGypLTR1a LTR/Gypsy (281) 503 1 3400554 324 29.8 9.2 0.0 chr14 65795361 65795501 (41554039) C MamGypLTR2b LTR/Gypsy (2) 920 767 3400732 260 38.3 7.4 3.3 chr14 65796668 65796937 (41552603) C MamGypLTR2b LTR/Gypsy (499) 423 143 3400735 330 26.8 4.7 1.6 chr14 65797157 65797285 (41552255) C LTR81B LTR/Gypsy (1182) 211 79 3400736 270 33.4 4.5 1.1 chr14 65821822 65822003 (41527537) C MamGypLTR1a LTR/Gypsy (2) 801 596 3400801 335 30.4 5.8 3.5 chr14 66297592 66297765 (41051775) C MamGypLTR1b LTR/Gypsy (46) 736 559 3401556 628 28.2 8.1 1.4 chr14 66410561 66410769 (40938771) C MamGypLTR1a LTR/Gypsy (0) 784 562 3401706 277 21.3 8.6 8.1 chr14 66507695 66507855 (40841685) + MamGypLTR2b LTR/Gypsy 759 922 (0) 3401828 321 23.0 2.3 1.1 chr14 66531508 66531595 (40817945) + MamGypLTR1d LTR/Gypsy 725 813 (0) 3401864 264 35.8 4.6 1.1 chr14 66619935 66620109 (40729431) + MamGypLTR1d LTR/Gypsy 328 508 (276) 3401970 454 21.5 6.6 0.7 chr14 66620197 66620332 (40729208) + MamGypLTR1d LTR/Gypsy 670 813 (0) 3401970 452 25.5 9.6 5.5 chr14 66829079 66829223 (40520317) + MamGypLTR2c LTR/Gypsy 834 980 (88) 3402246 452 25.5 9.6 5.5 chr14 66829683 66829756 (40519784) + MamGypLTR2c LTR/Gypsy 981 1062 (6) 3402246 370 38.3 6.7 0.0 chr14 66953847 66953995 (40395545) C MamGypLTR1b LTR/Gypsy (269) 513 355 3402413 227 33.3 2.3 3.9 chr14 66954172 66954299 (40395241) C MamGypLTR1b LTR/Gypsy (632) 150 25 3402413 1102 29.3 11.7 2.8 chr14 67612517 67613130 (39736410) C MamGypLTR1a LTR/Gypsy (0) 784 116 3403258 251 32.6 0.0 6.1 chr14 69111200 69111297 (38238243) C MamGypLTR1c LTR/Gypsy (389) 414 323 3405667 429 31.4 11.8 6.1 chr14 69141664 69142236 (38207304) + LTR81C LTR/Gypsy 214 836 (514) 3405718 417 27.4 9.1 5.3 chr14 70332842 70333084 (37016456) C MamGypLTR3 LTR/Gypsy (435) 404 153 3407823 517 35.1 8.4 5.3 chr14 71071059 71071509 (36278031) + MamGypLTR3 LTR/Gypsy 300 764 (75) 3408860 265 24.8 2.6 10.6 chr14 71624927 71625039 (35724501) C MamGypLTR3 LTR/Gypsy (245) 594 491 3409749 1298 30.8 11.1 12.3 chr14 71753507 71754125 (35595415) C LTR81B LTR/Gypsy (227) 1166 521 3409999 1298 28.3 9.3 11.2 chr14 71754602 71755155 (35594385) C LTR81B LTR/Gypsy (873) 520 10 3409999 381 31.8 14.9 1.5 chr14 72084669 72084863 (35264677) C MamGypLTR1c LTR/Gypsy (35) 768 548 3410526 230 28.4 10.4 2.1 chr14 72084897 72085040 (35264500) C MamGypLTR1c LTR/Gypsy (355) 429 274 3410526 311 26.9 20.7 6.3 chr14 72221057 72221278 (35128262) C MamGypLTR1b LTR/Gypsy (24) 758 505 3410688 241 17.8 7.9 4.0 chr14 72855143 72855218 (34494322) C MamGypLTR2b LTR/Gypsy (22) 900 822 3411615 227 22.7 9.6 9.6 chr14 73157613 73157695 (34191845) + MamGypLTR2b LTR/Gypsy 637 719 (203) 3411987 235 26.7 11.9 11.0 chr14 74158291 74158408 (33191132) C MamGypLTR1c LTR/Gypsy (16) 787 669 3414181 3561 30.4 1.9 1.9 chr14 74179322 74180371 (33169169) C MamGyp-int LTR/Gypsy (3937) 1125 76 3414212 360 28.1 5.4 7.0 chr14 74258792 74259074 (33090466) + LTR81B LTR/Gypsy 176 472 (921) 3414342 433 30.9 9.9 5.6 chr14 74303632 74304005 (33045535) C MamGypLTR1c LTR/Gypsy (57) 746 357 3414452 334 28.9 4.6 2.0 chr14 77185729 77185880 (30163660) + MamGypLTR1c LTR/Gypsy 55 210 (593) 3419825 462 27.1 3.9 1.9 chr14 77195257 77195410 (30154130) + MamGypLTR1a LTR/Gypsy 5 161 (623) 3419848 840 31.2 6.8 3.5 chr14 77196890 77197288 (30152252) + MamGypLTR1a LTR/Gypsy 365 776 (8) 3419848 730 28.6 14.2 8.4 chr14 77337705 77338122 (30011418) + MamGypLTR1a LTR/Gypsy 322 761 (52) 3420072 267 29.9 14.4 3.9 chr14 78423178 78423330 (28926210) C MamGypLTR1d LTR/Gypsy (313) 500 332 3422190 256 24.2 3.1 7.1 chr14 79567638 79567735 (27781805) C MamGypLTR1a LTR/Gypsy (35) 749 656 3424005 364 29.4 6.9 1.7 chr14 80460995 80461167 (26888373) C LTR81AB LTR/Gypsy (0) 278 97 3425271 233 27.5 9.9 0.8 chr14 80550375 80550495 (26799045) C MamGypLTR2c LTR/Gypsy (27) 1041 910 3425394 617 31.8 13.7 3.2 chr14 80875282 80875661 (26473879) + MamGypLTR1b LTR/Gypsy 363 782 (0) 3425812 519 20.8 10.0 7.9 chr14 81167046 81167285 (26182255) + LTR81B LTR/Gypsy 113 357 (993) 3426186 274 26.8 0.0 2.7 chr14 81168630 81168702 (26180838) + LTR81B LTR/Gypsy 1287 1357 (36) 3426186 244 29.2 4.0 15.0 chr14 82033853 82034078 (25315462) C MamGypLTR1c LTR/Gypsy (222) 591 391 3427434 253 24.6 5.7 10.9 chr14 82034343 82034534 (25315006) C MamGypLTR1c LTR/Gypsy (621) 182 1 3427434 277 33.5 2.7 5.9 chr14 82334437 82334623 (25014917) + MamGypLTR2b LTR/Gypsy 58 238 (684) 3427905 302 24.5 4.5 5.2 chr14 82460354 82460508 (24889032) C MamGypLTR2b LTR/Gypsy (0) 922 769 3428078 674 23.2 11.2 9.5 chr14 82764147 82764431 (24585109) C MamGypLTR1a LTR/Gypsy (493) 291 2 3428520 406 35.6 8.3 8.9 chr14 83256991 83257498 (24092042) + MamGypLTR1d LTR/Gypsy 302 806 (7) 3429168 243 29.4 0.0 2.1 chr14 83383350 83383443 (23966097) C MamGypLTR2b LTR/Gypsy (24) 898 807 3429340 564 34.7 9.4 2.4 chr14 83471370 83471960 (23877580) C MamGypLTR1a LTR/Gypsy (104) 678 33 3429476 361 31.6 9.6 4.2 chr14 83528013 83528273 (23821267) + LTR81C LTR/Gypsy 879 1153 (0) 3429550 225 25.0 5.7 4.5 chr14 83658717 83658804 (23690736) C MamGypLTR1a LTR/Gypsy (596) 188 100 3429724 538 31.4 2.3 4.6 chr14 84857478 84857737 (22491803) C LTR81AB LTR/Gypsy (0) 278 25 3431395 345 29.6 1.4 5.6 chr14 84906851 84906993 (22442547) C MamGypLTR1c LTR/Gypsy (631) 172 36 3431441 441 35.1 5.1 8.0 chr14 85283559 85284072 (22065468) + MamGypLTR1a LTR/Gypsy 2 500 (284) 3431975 369 29.0 3.4 2.7 chr14 85892660 85892808 (21456732) C MamGypLTR2b LTR/Gypsy (7) 915 766 3432881 555 33.3 10.6 5.4 chr14 86158057 86158612 (21190928) + LTR81C LTR/Gypsy 4 588 (565) 3433260 837 32.4 12.8 6.2 chr14 86208304 86209066 (21140474) C LTR81C LTR/Gypsy (0) 1153 340 3433336 258 23.8 2.3 7.0 chr14 86209211 86209296 (21140244) C LTR81C LTR/Gypsy (1045) 144 63 3433336 243 32.2 8.2 2.3 chr14 86579502 86579720 (20769820) + MamGypLTR2c LTR/Gypsy 824 1055 (13) 3433790 274 36.4 14.6 0.0 chr14 86623004 86623168 (20726372) C MamGypLTR3 LTR/Gypsy (10) 829 641 3433860 280 39.6 9.2 1.9 chr14 86695995 86696308 (20653232) C MamGypLTR1b LTR/Gypsy (9) 775 439 3433968 354 26.9 4.7 10.7 chr14 86696405 86696515 (20653025) C MamGypLTR1b LTR/Gypsy (527) 257 154 3433968 354 26.5 4.8 10.8 chr14 86696810 86696966 (20652574) C MamGypLTR1b LTR/Gypsy (620) 162 5 3433968 289 29.4 2.1 1.1 chr14 86908109 86908201 (20441339) + MamGypLTR1b LTR/Gypsy 686 779 (3) 3434231 346 33.3 8.3 1.9 chr14 87503900 87504104 (19845436) + MamGypLTR1a LTR/Gypsy 560 777 (7) 3435034 478 27.1 2.1 0.0 chr14 88143105 88143248 (19206292) + MamGypLTR1a LTR/Gypsy 627 773 (11) 3435981 407 29.6 14.6 1.3 chr14 88182213 88182438 (19167102) + MamGypLTR1c LTR/Gypsy 14 269 (534) 3436038 399 35.6 3.5 3.1 chr14 88182543 88182771 (19166769) + MamGypLTR1c LTR/Gypsy 516 745 (58) 3436038 261 26.8 5.8 7.8 chr14 88468832 88468985 (18880555) C MamGypLTR2c LTR/Gypsy (709) 359 209 3436461 342 35.0 8.7 0.5 chr14 88481882 88482099 (18867441) C MamGypLTR1c LTR/Gypsy (7) 796 561 3436478 357 32.1 4.5 2.9 chr14 88484045 88484288 (18865252) + LTR81C LTR/Gypsy 204 451 (899) 3436481 507 30.0 5.9 2.0 chr14 88484686 88484940 (18864600) + LTR81C LTR/Gypsy 833 1097 (56) 3436481 425 30.0 11.3 4.7 chr14 89368414 89368836 (17980704) C MamGypLTR1c LTR/Gypsy (245) 558 108 3437817 243 25.2 21.7 7.5 chr14 89415051 89415290 (17934250) C MamGypLTR1c LTR/Gypsy (372) 431 158 3437906 411 26.0 9.4 7.3 chr14 90047035 90047225 (17302315) C MamGypLTR1b LTR/Gypsy (2) 780 586 3438971 366 29.3 2.3 3.1 chr14 90069798 90069942 (17279598) + LTR81B LTR/Gypsy 7 150 (1243) 3439009 326 30.8 5.9 4.0 chr14 90075072 90075312 (17274228) + LTR81B LTR/Gypsy 1083 1362 (31) 3439017 247 28.5 6.4 7.8 chr14 90077535 90077675 (17271865) + MamGypLTR3 LTR/Gypsy 694 832 (7) 3439022 299 20.0 5.2 0.3 chr14 92423895 92423978 (14925562) + LTR81A LTR/Gypsy 156 247 (1103) 3443153 511 30.6 8.6 0.9 chr14 93230293 93230513 (14119027) + LTR81 LTR/Gypsy 694 931 (258) 3444684 234 27.4 10.2 8.4 chr14 93230897 93231111 (14118429) + LTR81 LTR/Gypsy 903 1121 (32) 3444684 320 27.6 7.4 6.0 chr14 93245100 93245315 (14104225) C LTR81 LTR/Gypsy (32) 1121 903 3444719 494 30.6 8.6 0.9 chr14 93245699 93245919 (14103621) C LTR81 LTR/Gypsy (258) 931 694 3444719 357 35.1 5.9 3.6 chr14 93245969 93246187 (14103353) C MamGypLTR2c LTR/Gypsy (533) 535 312 3444721 2845 31.9 2.8 2.8 chr14 93649573 93650621 (13698919) C MamGyp-int LTR/Gypsy (3943) 1119 71 3445489 369 27.9 12.8 5.8 chr14 94179981 94180247 (13169293) + LTR81C LTR/Gypsy 1 286 (867) 3446324 936 31.5 7.4 1.7 chr14 94180480 94180883 (13168657) + LTR81C LTR/Gypsy 720 1146 (7) 3446324 263 24.1 19.9 2.4 chr14 94201339 94201515 (13148025) + MamGypLTR1d LTR/Gypsy 19 226 (558) 3446354 294 22.3 8.4 5.9 chr14 94488647 94488765 (12860775) C MamGypLTR1c LTR/Gypsy (33) 770 649 3446922 251 16.9 1.7 0.0 chr14 94609987 94610045 (12739495) C MamGypLTR1b LTR/Gypsy (40) 742 683 3447127 361 28.0 6.9 0.7 chr14 95115750 95115893 (12233647) + MamGypLTR3 LTR/Gypsy 83 235 (604) 3447922 236 20.0 2.9 5.8 chr14 95127704 95127772 (12221768) + MamGypLTR1b LTR/Gypsy 2 68 (716) 3447945 251 30.3 3.6 1.8 chr14 95127883 95127993 (12221547) + MamGypLTR1b LTR/Gypsy 240 352 (430) 3447945 512 20.5 4.9 0.8 chr14 95128700 95128822 (12220718) + MamGypLTR1b LTR/Gypsy 641 768 (14) 3447948 245 29.7 4.4 0.0 chr14 95414724 95414814 (11934726) C MamGypLTR1c LTR/Gypsy (3) 800 706 3448569 249 21.5 12.3 0.0 chr14 95646519 95646583 (11702957) + MamGypLTR1d LTR/Gypsy 62 134 (679) 3448949 245 22.0 23.2 2.7 chr14 95646718 95646829 (11702711) + MamGypLTR1d LTR/Gypsy 381 515 (269) 3448949 370 27.7 13.4 5.3 chr14 95936518 95936686 (11412854) + MamGypLTR1b LTR/Gypsy 540 725 (57) 3449499 370 27.7 13.4 5.3 chr14 95937337 95937352 (11412188) + MamGypLTR1b LTR/Gypsy 726 741 (41) 3449499 442 19.8 3.7 1.9 chr14 96042474 96042581 (11306959) + LTR81AB LTR/Gypsy 10 119 (159) 3449700 236 27.7 2.5 5.9 chr14 96044019 96044137 (11305403) + LTR81B LTR/Gypsy 1274 1388 (5) 3449702 229 26.1 10.6 2.1 chr14 96485220 96485313 (10864227) C MamGypLTR2c LTR/Gypsy (669) 399 298 3450489 469 28.6 3.8 1.6 chr14 96485364 96485548 (10863992) C MamGypLTR2c LTR/Gypsy (879) 189 1 3450489 225 35.0 10.1 3.2 chr14 97148270 97148458 (10201082) C MamGypLTR2b LTR/Gypsy (211) 711 510 3451642 306 32.8 7.5 8.8 chr14 97148521 97148908 (10200632) C MamGypLTR2b LTR/Gypsy (539) 383 1 3451642 328 28.8 3.8 0.0 chr14 97187967 97188098 (10161442) + MamGypLTR2c LTR/Gypsy 891 1027 (41) 3451715 256 33.1 6.0 2.3 chr14 97584867 97584999 (9764541) + MamGypLTR2b LTR/Gypsy 11 148 (774) 3452432 241 20.9 1.4 2.9 chr14 97586238 97586306 (9763234) + MamGypLTR1c LTR/Gypsy 708 775 (28) 3452435 516 24.5 5.6 2.5 chr14 97977035 97977231 (9372309) C MamGypLTR1d LTR/Gypsy (610) 203 1 3453112 254 23.3 18.5 11.0 chr14 99382194 99382420 (7967120) C MamGypLTR2c LTR/Gypsy (84) 984 741 3455399 329 30.9 4.2 0.6 chr14 100148993 100149158 (7200382) C MamGypLTR3 LTR/Gypsy (12) 827 656 3456617 246 28.2 13.4 1.7 chr14 100149509 100149627 (7199913) C MamGypLTR2b LTR/Gypsy (781) 141 9 3456618 321 24.1 10.2 2.9 chr14 100153536 100153672 (7195868) C LTR81C LTR/Gypsy (30) 1123 977 3456626 227 26.5 4.7 2.4 chr14 101089942 101090026 (6259514) + MamGypLTR1d LTR/Gypsy 704 790 (23) 3458255 247 31.4 0.3 0.3 chr14 101109661 101109752 (6239788) + MamGypLTR1d LTR/Gypsy 712 813 (0) 3458290 798 29.1 9.0 6.7 chr14 102195868 102196302 (5153238) + LTR81B LTR/Gypsy 948 1392 (1) 3459647 272 25.4 1.6 0.0 chr14 105585420 105585482 (1764058) C MamGypLTR3 LTR/Gypsy (2) 837 774 3465154 363 31.4 7.7 5.5 chr15 20988037 20988414 (81542978) + LTR81A LTR/Gypsy 416 1016 (334) 3468385 508 34.1 3.6 6.5 chr15 21061366 21061672 (81469720) + MamGypLTR3 LTR/Gypsy 497 794 (45) 3468475 398 30.4 7.7 5.5 chr15 21994709 21995086 (80536306) + LTR81A LTR/Gypsy 416 1016 (334) 3469150 508 34.1 3.6 6.5 chr15 22072522 22072828 (80458564) + MamGypLTR3 LTR/Gypsy 497 794 (45) 3469240 243 30.8 7.7 5.5 chr15 23659025 23659206 (78872186) C MamGypLTR1b LTR/Gypsy (140) 642 457 3471491 325 27.0 14.1 4.2 chr15 25738937 25739149 (76792243) C MamGypLTR1a LTR/Gypsy (549) 235 2 3474159 228 22.9 4.9 0.0 chr15 25739794 25739854 (76791538) + MamGypLTR1a LTR/Gypsy 718 781 (3) 3474160 411 30.0 18.9 5.0 chr15 26974036 26974459 (75556933) C LTR81B LTR/Gypsy (11) 1382 900 3475828 257 10.3 0.0 0.0 chr15 27072194 27072232 (75459160) C MamGypLTR2c LTR/Gypsy (8) 1060 1022 3475960 260 30.4 5.1 6.1 chr15 29519753 29519948 (73011444) + LTR81B LTR/Gypsy 1011 1204 (189) 3479033 227 31.2 8.6 2.3 chr15 29755760 29755859 (72775533) + LTR81A LTR/Gypsy 1177 1281 (69) 3479372 227 31.2 8.6 2.3 chr15 29756440 29756466 (72774926) + LTR81A LTR/Gypsy 1282 1312 (38) 3479372 239 32.4 4.8 6.2 chr15 29773278 29773422 (72757970) + LTR81B LTR/Gypsy 1025 1167 (226) 3479401 292 30.2 5.6 0.9 chr15 30300118 30300224 (72231168) C LTR81AB LTR/Gypsy (165) 113 2 3480251 299 16.1 6.5 0.0 chr15 30988173 30988234 (71543158) C LTR81 LTR/Gypsy (25) 1164 1099 3481304 630 23.9 10.0 9.0 chr15 30989027 30989358 (71542034) C LTR81AB LTR/Gypsy (966) 384 47 3481305 391 31.9 15.2 3.2 chr15 31489680 31490055 (71041337) + MamGypLTR3 LTR/Gypsy 402 822 (17) 3482034 645 23.9 9.7 8.7 chr15 32000740 32001071 (70530321) + LTR81AB LTR/Gypsy 47 384 (966) 3482676 299 16.1 6.5 0.0 chr15 32001864 32001925 (70529467) + LTR81 LTR/Gypsy 1099 1164 (25) 3482677 229 27.6 12.6 0.0 chr15 32121955 32122041 (70409351) + MamGypLTR1d LTR/Gypsy 708 805 (8) 3482823 1852 30.4 6.3 2.7 chr15 33479349 33480099 (69051293) + MamGypLTR1c LTR/Gypsy 22 799 (4) 3484651 947 33.7 14.5 1.9 chr15 33570997 33571732 (68959660) + LTR81A LTR/Gypsy 146 1165 (185) 3484793 344 18.4 27.4 3.2 chr15 33571787 33571943 (68959449) + LTR81A LTR/Gypsy 1156 1350 (0) 3484793 438 33.0 8.7 2.5 chr15 33751874 33752115 (68779277) + MamGypLTR1b LTR/Gypsy 478 734 (48) 3485045 432 31.3 4.5 1.8 chr15 35219415 35219635 (67311757) + LTR81A LTR/Gypsy 13 239 (1111) 3487156 324 27.4 4.6 3.4 chr15 35221939 35222095 (67309297) + LTR81A LTR/Gypsy 904 1139 (14) 3487156 320 23.0 20.0 4.5 chr15 35346335 35346489 (67184903) + LTR81B LTR/Gypsy 1106 1284 (109) 3487417 306 24.1 9.3 11.9 chr15 36016072 36016264 (66515128) + LTR81C LTR/Gypsy 105 292 (1101) 3488281 583 26.0 7.5 8.3 chr15 36016635 36016982 (66514410) + LTR81C LTR/Gypsy 786 1130 (23) 3488281 698 29.1 12.2 9.0 chr15 36104762 36105319 (66426073) + MamGypLTR1c LTR/Gypsy 225 800 (3) 3488386 246 13.7 5.9 0.0 chr15 36163364 36163414 (66367978) + MamGypLTR1b LTR/Gypsy 3 56 (726) 3488456 431 33.7 9.9 4.5 chr15 36163558 36163986 (66367406) + MamGypLTR1b LTR/Gypsy 243 719 (63) 3488456 280 28.4 21.5 7.7 chr15 36386501 36386798 (66144594) C MamGypLTR1b LTR/Gypsy (26) 756 418 3488734 377 26.9 31.2 5.1 chr15 36658956 36659251 (65872141) + LTR81B LTR/Gypsy 1008 1379 (14) 3489087 266 31.1 15.7 4.4 chr15 37151445 37151693 (65379699) + LTR81B LTR/Gypsy 196 472 (921) 3489744 228 25.0 9.0 8.0 chr15 37578148 37578247 (64953145) + LTR81C LTR/Gypsy 1025 1125 (28) 3490255 274 16.0 4.7 11.8 chr15 38122316 38122400 (64408992) C MamGypLTR3 LTR/Gypsy (206) 633 555 3490877 284 28.9 4.6 3.6 chr15 38225219 38225444 (64305948) C LTR81A LTR/Gypsy (200) 1150 851 3490997 387 24.5 1.9 1.0 chr15 38259361 38259463 (64271929) C MamGypLTR3 LTR/Gypsy (0) 839 736 3491020 496 30.5 11.0 2.4 chr15 38259948 38260131 (64271261) C MamGypLTR3 LTR/Gypsy (114) 725 532 3491020 496 30.5 11.0 2.4 chr15 38260241 38260391 (64271001) C MamGypLTR3 LTR/Gypsy (308) 531 362 3491020 392 30.8 5.4 14.6 chr15 38478145 38478479 (64052913) + MamGypLTR1d LTR/Gypsy 155 458 (345) 3491339 420 28.9 10.1 9.2 chr15 38478507 38478723 (64052669) + MamGypLTR1d LTR/Gypsy 544 762 (51) 3491339 757 25.3 10.4 1.8 chr15 39524536 39524813 (63006579) + MamGypLTR1d LTR/Gypsy 1 302 (511) 3492796 404 18.1 0.0 2.3 chr15 39526572 39526663 (63004729) + MamGypLTR1c LTR/Gypsy 695 796 (7) 3492801 601 26.1 9.6 10.9 chr15 39821328 39821722 (62709670) + LTR81A LTR/Gypsy 954 1343 (7) 3493173 527 30.5 11.0 6.0 chr15 39982613 39982947 (62548445) C MamGypLTR3 LTR/Gypsy (9) 830 479 3493364 290 32.5 4.4 5.0 chr15 40035516 40035674 (62495718) + LTR81A LTR/Gypsy 106 263 (15) 3493446 397 28.0 15.7 7.0 chr15 40037013 40037381 (62494011) + LTR81A LTR/Gypsy 708 1108 (242) 3493446 270 29.6 17.6 0.0 chr15 40520979 40521161 (62010231) C MamGypLTR1d LTR/Gypsy (195) 589 387 3494216 357 22.2 6.0 1.0 chr15 40521958 40522057 (62009335) C MamGypLTR1d LTR/Gypsy (664) 149 45 3494216 235 31.1 9.3 0.9 chr15 42341047 42341153 (60190239) + LTR81AB LTR/Gypsy 4 119 (159) 3497652 424 33.8 6.8 1.3 chr15 42361507 42361743 (60169649) + MamGypLTR2c LTR/Gypsy 5 254 (814) 3497690 667 28.4 10.7 7.4 chr15 42443354 42443744 (60087648) + MamGypLTR1c LTR/Gypsy 96 499 (304) 3497806 252 28.2 0.0 0.0 chr15 42443862 42443932 (60087460) + MamGypLTR1c LTR/Gypsy 741 811 (2) 3497806 268 25.2 11.4 4.3 chr15 44321031 44321161 (58210231) + LTR81B LTR/Gypsy 1200 1306 (87) 3501098 468 25.1 5.6 3.5 chr15 44337245 44337442 (58193950) C LTR81B LTR/Gypsy (20) 1373 1172 3501112 327 24.2 15.0 3.8 chr15 44588578 44588710 (57942682) C LTR81B LTR/Gypsy (1216) 177 30 3501605 377 23.4 6.5 0.0 chr15 45038723 45038829 (57492563) C MamGypLTR1d LTR/Gypsy (10) 803 690 3502500 322 30.7 7.3 0.7 chr15 45736953 45737103 (56794289) + MamGypLTR2c LTR/Gypsy 58 218 (850) 3503642 364 31.6 10.3 4.8 chr15 46073077 46073542 (56457850) C MamGypLTR1d LTR/Gypsy (264) 520 56 3504312 436 33.8 9.9 6.7 chr15 46325022 46325335 (56206057) + MamGyp-int LTR/Gypsy 249 572 (4490) 3504683 389 25.2 15.3 2.0 chr15 46377236 46377290 (56154102) C MamGypLTR2b LTR/Gypsy (0) 922 865 3504728 389 25.2 15.3 2.0 chr15 46377316 46377461 (56153931) C MamGypLTR2b LTR/Gypsy (58) 864 694 3504728 316 36.6 1.9 2.5 chr15 46511423 46511579 (56019813) + MamGyp-int LTR/Gypsy 4386 4541 (521) 3504849 239 28.2 16.0 0.8 chr15 46565995 46566119 (55965273) + MamGypLTR1d LTR/Gypsy 8 151 (652) 3504914 286 35.1 2.2 3.0 chr15 46566225 46566359 (55965033) + MamGypLTR1d LTR/Gypsy 332 465 (348) 3504914 263 31.1 3.8 0.0 chr15 46608750 46608855 (55922537) C LTR81A LTR/Gypsy (1210) 140 31 3504961 304 29.1 12.6 0.6 chr15 46944962 46945120 (55586272) + LTR81A LTR/Gypsy 70 247 (1103) 3505343 231 31.5 6.1 2.6 chr15 47542121 47542234 (54989158) + MamGypLTR1b LTR/Gypsy 665 782 (0) 3506080 693 32.3 3.8 5.3 chr15 47861387 47861782 (54669610) C MamGypLTR1b LTR/Gypsy (37) 745 356 3506480 263 20.4 8.2 4.1 chr15 47861856 47861952 (54669440) C MamGypLTR1b LTR/Gypsy (679) 103 3 3506481 505 28.2 4.9 4.4 chr15 47896269 47896472 (54634920) + MamGypLTR1a LTR/Gypsy 563 767 (17) 3506525 685 31.9 8.0 6.4 chr15 48259596 48260316 (54271076) C MamGypLTR1c LTR/Gypsy (32) 771 39 3507051 300 32.8 1.5 2.3 chr15 48393064 48393194 (54138198) C MamGypLTR1a LTR/Gypsy (637) 147 18 3507246 436 32.9 5.9 8.7 chr15 48401556 48402028 (54129364) + LTR81A LTR/Gypsy 1 460 (890) 3507258 333 32.2 3.1 5.6 chr15 48680354 48680514 (53850878) C MamGypLTR3 LTR/Gypsy (54) 785 629 3507649 768 37.0 4.6 2.6 chr15 49711012 49711402 (52819990) C MamGypLTR1c LTR/Gypsy (22) 781 383 3509022 1023 31.9 13.3 3.4 chr15 50104976 50105672 (52425720) C MamGypLTR1c LTR/Gypsy (10) 793 28 3509497 268 24.7 4.4 1.1 chr15 50146022 50146111 (52385281) C MamGypLTR1b LTR/Gypsy (6) 776 684 3509550 324 25.6 9.3 5.0 chr15 50199397 50199536 (52331856) + MamGypLTR2b LTR/Gypsy 762 907 (15) 3509629 396 29.7 15.5 2.3 chr15 50420378 50420642 (52110750) + LTR81 LTR/Gypsy 420 719 (631) 3509932 584 26.6 14.7 4.9 chr15 50420692 50420974 (52110418) + LTR81 LTR/Gypsy 807 1127 (62) 3509932 584 26.6 14.7 4.9 chr15 50421289 50421352 (52110040) + LTR81 LTR/Gypsy 1128 1188 (1) 3509932 333 27.5 6.2 2.7 chr15 51094646 51094754 (51436638) C MamGypLTR1b LTR/Gypsy (175) 607 495 3511332 308 20.3 11.5 16.4 chr15 51097234 51097398 (51433994) C MamGypLTR1b LTR/Gypsy (609) 173 17 3511337 290 26.3 7.6 0.8 chr15 51471959 51472077 (51059315) + MamGypLTR1a LTR/Gypsy 642 768 (16) 3511928 427 35.2 8.2 7.7 chr15 53298786 53299407 (49231985) + MamGypLTR1b LTR/Gypsy 10 634 (148) 3514837 469 31.1 3.6 2.8 chr15 53414506 53414753 (49116639) + LTR81C LTR/Gypsy 1 250 (903) 3514976 430 26.2 15.9 2.8 chr15 53414854 53415104 (49116288) + LTR81C LTR/Gypsy 1090 1373 (20) 3514976 316 27.2 5.5 0.5 chr15 53468569 53468733 (49062659) + MamGypLTR1d LTR/Gypsy 697 805 (8) 3515051 285 36.1 3.1 4.5 chr15 53492064 53492350 (49039042) + MamGypLTR1b LTR/Gypsy 460 742 (40) 3515081 253 37.0 6.9 5.0 chr15 53794883 53795084 (48736308) + MamGypLTR2c LTR/Gypsy 218 423 (645) 3515538 228 19.7 6.9 1.4 chr15 56288748 56288819 (46242573) C MamGypLTR1d LTR/Gypsy (14) 799 724 3519126 316 22.7 0.9 3.6 chr15 56290741 56290823 (46240569) C LTR81A LTR/Gypsy (1205) 188 99 3519132 243 28.0 6.0 0.0 chr15 56342488 56342587 (46188805) C MamGypLTR2c LTR/Gypsy (944) 124 19 3519220 413 25.2 9.9 2.1 chr15 56343381 56343522 (46187870) C LTR81A LTR/Gypsy (1179) 171 19 3519223 413 17.7 1.2 0.2 chr15 56541334 56541431 (45989961) + MamGypLTR1a LTR/Gypsy 1 98 (684) 3519480 426 24.1 6.2 10.1 chr15 56542183 56542397 (45988995) + MamGypLTR1b LTR/Gypsy 589 801 (2) 3519484 1461 28.1 15.6 4.1 chr15 56578271 56578999 (45952393) + MamGypLTR1d LTR/Gypsy 1 813 (0) 3519526 655 32.3 7.6 8.0 chr15 56819613 56820163 (45711229) + LTR81B LTR/Gypsy 1 549 (844) 3519804 244 30.0 18.7 5.0 chr15 56820670 56821006 (45710386) + LTR81B LTR/Gypsy 1010 1392 (1) 3519804 1539 30.0 13.7 1.4 chr15 57114591 57115245 (45416147) C LTR81B LTR/Gypsy (0) 1393 658 3520251 598 29.1 6.6 3.7 chr15 57115242 57115512 (45415880) C LTR81B LTR/Gypsy (901) 492 214 3520251 289 29.6 6.5 7.2 chr15 57305455 57305515 (45225877) + LTR81B LTR/Gypsy 175 232 (1161) 3520572 289 29.6 6.5 7.2 chr15 57305819 57305909 (45225483) + LTR81B LTR/Gypsy 233 326 (1067) 3520572 345 25.1 3.5 9.7 chr15 57781996 57782200 (44749192) + LTR81C LTR/Gypsy 962 1347 (3) 3521301 237 27.3 1.1 2.2 chr15 58122966 58123055 (44408337) + LTR81AB LTR/Gypsy 5 93 (185) 3521790 370 28.0 24.2 9.5 chr15 58675652 58676146 (43855246) C MamGypLTR3 LTR/Gypsy (118) 721 154 3522553 367 27.4 10.1 12.8 chr15 58686408 58686713 (43844679) + LTR81 LTR/Gypsy 9 306 (883) 3522574 1008 26.6 14.6 4.5 chr15 58720216 58720750 (43810642) C MamGypLTR1d LTR/Gypsy (6) 807 219 3522629 1042 23.3 4.0 4.8 chr15 59823697 59824099 (42707293) C LTR81A LTR/Gypsy (997) 396 3 3524651 233 21.7 4.7 3.5 chr15 62440351 62440436 (40090956) C MamGypLTR2b LTR/Gypsy (135) 787 701 3528700 956 30.4 8.9 2.4 chr15 62633866 62634360 (39897032) + MamGypLTR1b LTR/Gypsy 3 529 (253) 3528999 232 27.0 1.6 1.6 chr15 62635141 62635204 (39896188) + MamGypLTR1b LTR/Gypsy 737 800 (3) 3528999 450 26.9 15.8 4.2 chr15 63188559 63189013 (39342379) + MamGypLTR1b LTR/Gypsy 273 784 (0) 3529839 467 34.0 1.5 3.0 chr15 63453592 63453791 (39077601) C MamGyp-int LTR/Gypsy (3727) 1335 1139 3530298 465 33.5 1.8 2.3 chr15 63455578 63455748 (39075644) C MamGypLTR1c LTR/Gypsy (199) 604 435 3530304 393 22.7 2.2 3.3 chr15 63455899 63455989 (39075403) C MamGypLTR1c LTR/Gypsy (374) 429 340 3530304 296 23.4 4.1 8.3 chr15 63477772 63477803 (39053589) + MamGypLTR1b LTR/Gypsy 629 660 (122) 3530346 296 23.4 4.1 8.3 chr15 63478105 63478192 (39053200) + MamGypLTR1b LTR/Gypsy 661 744 (38) 3530346 446 23.8 6.5 9.5 chr15 63713545 63713776 (38817616) + MamGypLTR2b LTR/Gypsy 691 915 (7) 3530730 727 31.3 5.5 1.7 chr15 64141265 64141609 (38389783) C MamGypLTR1b LTR/Gypsy (356) 426 69 3531430 299 26.1 5.3 2.1 chr15 65104541 65104634 (37426758) + MamGypLTR1c LTR/Gypsy 138 234 (548) 3533393 390 26.6 4.7 0.8 chr15 65104856 65104984 (37426408) + MamGypLTR1c LTR/Gypsy 638 771 (32) 3533393 450 25.8 21.9 1.3 chr15 65571912 65572135 (36959257) + LTR81 LTR/Gypsy 880 1149 (40) 3534394 241 28.1 10.1 0.0 chr15 66893238 66893326 (35638066) C MamGypLTR1d LTR/Gypsy (1) 812 715 3537049 560 33.6 15.8 1.5 chr15 68305736 68306070 (34225322) + MamGypLTR1b LTR/Gypsy 383 765 (17) 3539511 849 31.0 12.3 5.7 chr15 68312441 68313050 (34218342) C MamGypLTR1c LTR/Gypsy (141) 662 13 3539529 492 28.6 14.1 7.9 chr15 68720299 68720716 (33810676) + LTR81A LTR/Gypsy 11 454 (896) 3540219 347 29.0 2.8 2.8 chr15 68830378 68830519 (33700873) C LTR81A LTR/Gypsy (1) 1392 1251 3540397 383 23.6 15.4 2.9 chr15 68830712 68830871 (33700521) C LTR81A LTR/Gypsy (318) 1032 874 3540397 248 33.5 3.0 11.1 chr15 68849201 68849462 (33681930) C MamGypLTR1b LTR/Gypsy (465) 317 77 3540430 256 29.7 4.4 0.0 chr15 68924608 68924698 (33606694) C LTR81B LTR/Gypsy (31) 1362 1268 3540582 504 24.1 9.1 7.3 chr15 68924732 68924915 (33606477) C LTR81B LTR/Gypsy (1102) 291 87 3540582 504 24.1 9.1 7.3 chr15 68925231 68925331 (33606061) C LTR81B LTR/Gypsy (1307) 86 1 3540582 453 27.0 4.1 5.9 chr15 69025606 69025774 (33505618) C LTR81A LTR/Gypsy (1131) 219 54 3540791 487 27.2 15.3 8.4 chr15 69382177 69382375 (33149017) C MamGypLTR1b LTR/Gypsy (114) 668 466 3541414 487 27.2 15.3 8.4 chr15 69382416 69382692 (33148700) C MamGypLTR1b LTR/Gypsy (317) 465 159 3541414 248 25.6 0.0 0.0 chr15 69876755 69876821 (32654571) + MamGypLTR1d LTR/Gypsy 715 810 (3) 3542315 261 19.6 0.0 0.0 chr15 69952188 69952238 (32579154) C MamGypLTR1a LTR/Gypsy (239) 545 495 3542450 269 26.0 4.3 11.5 chr15 69968402 69968631 (32562761) C LTR81A LTR/Gypsy (1088) 305 98 3542479 279 32.6 11.4 1.7 chr15 70099322 70099496 (32431896) + MamGypLTR2c LTR/Gypsy 214 405 (663) 3542707 293 26.6 14.6 1.5 chr15 70144942 70145071 (32386321) + MamGypLTR1a LTR/Gypsy 626 772 (12) 3542801 492 25.1 7.3 5.5 chr15 70695168 70695441 (31835951) + LTR81B LTR/Gypsy 10 288 (1105) 3543814 280 26.6 11.7 4.1 chr15 70695990 70696134 (31835258) + LTR81B LTR/Gypsy 1201 1356 (37) 3543814 348 29.8 9.9 0.6 chr15 70891137 70891308 (31640084) C MamGypLTR1c LTR/Gypsy (567) 236 49 3544153 753 32.0 6.0 9.2 chr15 70906285 70906786 (31624606) C MamGypLTR1c LTR/Gypsy (3) 800 315 3544177 357 22.8 7.9 8.3 chr15 71157187 71157359 (31374033) C MamGypLTR1d LTR/Gypsy (216) 568 378 3544593 293 17.6 33.7 1.1 chr15 71157988 71158079 (31373313) C MamGypLTR1d LTR/Gypsy (601) 202 81 3544593 536 27.1 8.5 9.1 chr15 71526051 71526379 (31005013) C MamGypLTR2c LTR/Gypsy (16) 1052 726 3545088 399 29.9 23.0 2.9 chr15 71526466 71526681 (31004711) C MamGypLTR2c LTR/Gypsy (604) 464 184 3545088 399 29.9 23.0 2.9 chr15 71526934 71527098 (31004294) C MamGypLTR2c LTR/Gypsy (885) 183 7 3545088 302 24.2 14.3 0.0 chr15 71742921 71743011 (30788381) C MamGypLTR2c LTR/Gypsy (0) 1068 965 3545414 225 27.7 4.2 1.1 chr15 71744002 71744096 (30787296) C LTR81C LTR/Gypsy (162) 991 894 3545417 245 28.7 6.9 6.3 chr15 71744528 71744702 (30786690) C MamGypLTR2b LTR/Gypsy (615) 307 132 3545418 830 27.7 6.1 1.5 chr15 72027283 72027418 (30503974) C MamGypLTR1a LTR/Gypsy (11) 773 639 3545905 830 27.7 6.1 1.5 chr15 72027452 72027644 (30503748) C MamGypLTR1a LTR/Gypsy (146) 638 430 3545905 810 21.4 5.0 6.8 chr15 72029007 72029287 (30502105) C MamGypLTR1a LTR/Gypsy (508) 276 1 3545905 493 29.1 6.6 4.1 chr15 72682821 72683017 (29848375) C MamGypLTR1d LTR/Gypsy (0) 813 612 3546997 249 32.0 9.6 5.1 chr15 73158697 73158874 (29372518) C MamGypLTR1c LTR/Gypsy (617) 186 1 3547829 650 24.2 18.4 3.8 chr15 73299357 73299703 (29231689) C LTR81 LTR/Gypsy (14) 1175 778 3548035 389 26.3 6.6 8.4 chr15 73438111 73438276 (29093116) C MamGypLTR3 LTR/Gypsy (94) 745 583 3548258 657 27.4 11.3 4.6 chr15 73678689 73678990 (28852402) + MamGypLTR3 LTR/Gypsy 458 779 (60) 3548593 589 32.7 5.8 2.3 chr15 73929893 73930152 (28601240) C MamGypLTR1b LTR/Gypsy (37) 745 477 3548979 285 27.9 4.4 9.2 chr15 74249831 74250059 (28281333) C MamGypLTR1a LTR/Gypsy (392) 392 175 3549506 233 29.0 1.4 5.5 chr15 74436978 74437050 (28094342) C MamGypLTR1d LTR/Gypsy (300) 513 444 3549820 350 31.7 8.9 3.0 chr15 75519915 75520184 (27011208) + MamGypLTR3 LTR/Gypsy 124 409 (430) 3551783 225 25.4 15.3 0.8 chr15 75520302 75520432 (27010960) + MamGypLTR3 LTR/Gypsy 592 741 (98) 3551783 269 32.7 4.9 0.6 chr15 75954324 75954486 (26576906) C MamGypLTR1c LTR/Gypsy (16) 787 618 3552662 321 33.7 7.0 3.5 chr15 75983982 75984181 (26547211) + MamGypLTR3 LTR/Gypsy 228 434 (405) 3552701 420 30.7 2.5 5.0 chr15 75984253 75984326 (26547066) + MamGypLTR3 LTR/Gypsy 587 661 (178) 3552701 420 30.7 2.5 5.0 chr15 75984761 75984883 (26546509) + MamGypLTR3 LTR/Gypsy 662 780 (59) 3552701 313 29.1 10.0 2.6 chr15 76052745 76052973 (26478419) C MamGypLTR3 LTR/Gypsy (470) 369 124 3552805 418 28.9 1.4 8.7 chr15 78187708 78187830 (24343562) C MamGypLTR3 LTR/Gypsy (59) 780 662 3556070 418 28.9 1.4 8.7 chr15 78187966 78188049 (24343343) C MamGypLTR3 LTR/Gypsy (178) 661 588 3556070 363 23.8 0.8 7.6 chr15 78532382 78532513 (23998879) + MamGypLTR2b LTR/Gypsy 798 920 (2) 3556651 672 24.5 6.0 1.4 chr15 78804304 78804518 (23726874) C MamGypLTR2b LTR/Gypsy (2) 920 696 3557202 328 25.2 6.5 0.0 chr15 79399540 79399646 (23131746) C MamGypLTR2b LTR/Gypsy (20) 902 789 3558343 302 32.7 15.1 3.5 chr15 79399894 79400270 (23131122) C MamGypLTR2b LTR/Gypsy (472) 450 30 3558343 250 29.9 6.8 2.7 chr15 79405343 79405490 (23125902) C LTR81A LTR/Gypsy (1127) 223 70 3558353 710 26.1 13.8 4.1 chr15 79407424 79407814 (23123578) C MamGypLTR1b LTR/Gypsy (0) 782 354 3558360 495 30.5 20.6 4.8 chr15 79591581 79591932 (22939460) + MamGypLTR1b LTR/Gypsy 369 773 (9) 3558691 229 37.0 0.0 0.0 chr15 79886410 79886490 (22644902) + MamGypLTR1c LTR/Gypsy 520 600 (213) 3559124 311 25.0 8.9 0.0 chr15 79886520 79886643 (22644749) + MamGypLTR1c LTR/Gypsy 659 793 (10) 3559124 498 29.4 10.7 1.8 chr15 80490075 80490299 (22041093) + MamGypLTR3 LTR/Gypsy 546 790 (49) 3560169 284 28.9 12.6 6.6 chr15 80519546 80519823 (22011569) C LTR81B LTR/Gypsy (22) 1328 868 3560212 259 32.0 7.1 6.6 chr15 80520825 80520920 (22010472) C LTR81B LTR/Gypsy (754) 639 540 3560212 259 32.0 7.1 6.6 chr15 80521436 80521549 (22009843) C LTR81B LTR/Gypsy (854) 539 428 3560212 345 26.7 17.4 5.9 chr15 80521950 80522168 (22009224) C LTR81B LTR/Gypsy (1120) 273 30 3560212 774 27.0 4.3 5.0 chr15 80523826 80524148 (22007244) C LTR81B LTR/Gypsy (1072) 321 1 3560221 288 17.2 7.8 0.0 chr15 80570092 80570155 (21961237) + LTR81C LTR/Gypsy 1053 1121 (32) 3560290 292 29.6 23.2 1.8 chr15 80619014 80619340 (21912052) + MamGypLTR1c LTR/Gypsy 128 527 (255) 3560363 420 25.9 9.7 1.5 chr15 80619352 80619547 (21911845) + MamGypLTR1c LTR/Gypsy 588 799 (4) 3560363 414 30.7 12.4 2.4 chr15 80636526 80637076 (21894316) C MamGypLTR1a LTR/Gypsy (4) 780 113 3560387 337 29.0 5.7 3.2 chr15 80691705 80691862 (21839530) C LTR81A LTR/Gypsy (129) 1221 1075 3560457 248 33.9 4.8 2.4 chr15 81324310 81324433 (21206959) + MamGypLTR2c LTR/Gypsy 265 391 (677) 3561507 321 32.1 0.9 3.5 chr15 81396827 81396942 (21134450) + MamGyp-int LTR/Gypsy 2107 2219 (2843) 3561647 747 26.5 15.7 4.6 chr15 81456344 81456731 (21074661) C LTR81B LTR/Gypsy (22) 1371 941 3561758 574 31.1 5.5 7.3 chr15 81457817 81458267 (21073125) C LTR81B LTR/Gypsy (940) 453 11 3561758 659 26.0 3.5 1.2 chr15 81470927 81471097 (21060295) C MamGypLTR2c LTR/Gypsy (36) 1032 858 3561783 247 32.8 1.6 0.0 chr15 81471386 81471449 (21059943) C MamGypLTR2c LTR/Gypsy (587) 335 271 3561783 634 26.2 1.2 2.4 chr15 81471628 81471795 (21059597) C MamGypLTR2c LTR/Gypsy (884) 184 19 3561783 281 22.9 0.0 0.0 chr15 81472113 81472173 (21059219) C MamGypLTR2c LTR/Gypsy (150) 918 858 3561785 468 24.3 14.1 3.3 chr15 81730020 81730232 (20801160) C LTR81A LTR/Gypsy (1102) 248 13 3562195 378 23.4 15.1 9.6 chr15 81889327 81889544 (20641848) C MamGypLTR2c LTR/Gypsy (27) 1041 812 3562419 254 33.7 11.5 2.7 chr15 81891661 81891843 (20639549) C MamGypLTR2c LTR/Gypsy (573) 495 297 3562422 258 23.3 2.7 1.4 chr15 81891871 81891944 (20639448) C MamGypLTR2c LTR/Gypsy (880) 188 114 3562422 434 27.2 29.2 2.9 chr15 82200316 82200638 (20330754) C MamGypLTR1b LTR/Gypsy (26) 756 349 3562894 274 22.6 4.8 0.0 chr15 82200727 82200788 (20330604) C MamGypLTR1b LTR/Gypsy (572) 210 146 3562894 316 26.9 14.2 0.0 chr15 82201220 82201353 (20330039) C MamGypLTR1b LTR/Gypsy (254) 528 376 3562896 1697 32.2 9.0 5.8 chr15 82218086 82219087 (20312305) + LTR81A LTR/Gypsy 119 1152 (198) 3562923 284 33.5 6.6 3.5 chr15 82401430 82401627 (20129765) + LTR81C LTR/Gypsy 108 311 (878) 3563247 680 26.2 2.0 10.2 chr15 82752289 82752413 (19778979) C MamGypLTR3 LTR/Gypsy (59) 780 656 3563755 680 26.2 2.0 10.2 chr15 82752551 82752670 (19778722) C MamGypLTR3 LTR/Gypsy (184) 655 555 3563755 274 39.4 5.4 4.7 chr15 82752734 82752991 (19778401) C MamGypLTR3 LTR/Gypsy (405) 434 175 3563755 618 26.2 2.0 10.2 chr15 82987204 82987323 (19544069) + MamGypLTR3 LTR/Gypsy 555 655 (184) 3564022 618 26.2 2.0 10.2 chr15 82987461 82987585 (19543807) + MamGypLTR3 LTR/Gypsy 656 780 (59) 3564022 618 26.2 2.0 10.2 chr15 83128875 83128999 (19402393) C MamGypLTR3 LTR/Gypsy (59) 780 656 3564222 618 26.2 2.0 10.2 chr15 83129137 83129256 (19402136) C MamGypLTR3 LTR/Gypsy (184) 655 555 3564222 535 22.1 2.3 0.8 chr15 83450295 83450426 (19080966) + MamGypLTR1b LTR/Gypsy 649 782 (0) 3564731 409 29.2 16.1 8.7 chr15 83507261 83507639 (19023753) + MamGypLTR1c LTR/Gypsy 407 813 (0) 3564844 240 21.6 8.6 12.8 chr15 83751044 83751096 (18780296) + LTR81AB LTR/Gypsy 2 45 (233) 3565305 240 21.6 8.6 12.8 chr15 83751393 83751455 (18779937) + LTR81AB LTR/Gypsy 46 113 (165) 3565305 520 28.7 14.8 3.8 chr15 83751892 83752108 (18779284) + LTR81 LTR/Gypsy 860 1108 (81) 3565307 520 28.7 14.8 3.8 chr15 83752415 83752486 (18778906) + LTR81 LTR/Gypsy 1109 1181 (8) 3565307 258 26.5 1.2 2.4 chr15 83918020 83918104 (18613288) + MamGyp-int LTR/Gypsy 2054 2137 (2925) 3565583 336 21.5 2.3 2.6 chr15 84280653 84280743 (18250649) C MamGypLTR2c LTR/Gypsy (55) 1013 940 3566135 361 23.1 4.5 5.5 chr15 84280797 84280906 (18250486) C MamGypLTR2c LTR/Gypsy (97) 971 863 3566135 254 23.9 7.7 3.3 chr15 84280970 84281060 (18250332) C LTR81C LTR/Gypsy (240) 913 819 3566136 243 27.8 18.0 3.0 chr15 84281491 84281590 (18249802) C MamGypLTR2c LTR/Gypsy (901) 167 53 3566135 254 29.9 3.9 4.9 chr15 84480848 84480949 (18050443) C MamGypLTR3 LTR/Gypsy (20) 819 719 3566408 478 27.8 3.5 6.7 chr15 84542471 84542814 (17988578) + LTR81A LTR/Gypsy 6 334 (1059) 3566510 438 25.8 2.2 3.6 chr15 84594574 84594710 (17936682) C MamGypLTR1d LTR/Gypsy (667) 146 12 3566606 331 29.1 4.0 5.1 chr15 84697259 84697448 (17833944) C MamGypLTR2c LTR/Gypsy (56) 1012 678 3566745 667 26.2 2.0 9.8 chr15 84856252 84856376 (17675016) C MamGypLTR3 LTR/Gypsy (59) 780 656 3566925 667 26.2 2.0 9.8 chr15 84856516 84856634 (17674758) C MamGypLTR3 LTR/Gypsy (184) 655 555 3566925 260 36.7 6.9 3.5 chr15 84856698 84856900 (17674492) C MamGypLTR3 LTR/Gypsy (405) 434 225 3566925 268 39.4 5.4 4.7 chr15 84961321 84961578 (17569814) + MamGypLTR3 LTR/Gypsy 175 434 (405) 3567057 686 26.2 2.0 9.8 chr15 84961642 84961760 (17569632) + MamGypLTR3 LTR/Gypsy 555 655 (184) 3567057 686 26.2 2.0 9.8 chr15 84961900 84962024 (17569368) + MamGypLTR3 LTR/Gypsy 656 780 (59) 3567057 372 31.2 3.9 1.3 chr15 85436639 85436794 (17094598) C MamGypLTR1d LTR/Gypsy (5) 808 649 3567846 313 28.3 2.8 1.9 chr15 85437003 85437110 (17094282) C MamGypLTR1d LTR/Gypsy (354) 449 341 3567846 1972 29.4 4.4 6.3 chr15 85505106 85505294 (17026098) + MamGypLTR1a LTR/Gypsy 1 182 (602) 3568007 1972 29.4 4.4 6.3 chr15 85505605 85505673 (17025719) + MamGypLTR1a LTR/Gypsy 183 232 (552) 3568007 1972 29.4 4.4 6.3 chr15 85505936 85506420 (17024972) + MamGypLTR1a LTR/Gypsy 233 731 (53) 3568007 618 26.2 2.0 10.2 chr15 85735345 85735469 (16795923) C MamGypLTR3 LTR/Gypsy (59) 780 656 3568378 618 26.2 2.0 10.2 chr15 85735607 85735726 (16795666) C MamGypLTR3 LTR/Gypsy (184) 655 555 3568378 310 32.0 6.3 5.1 chr15 86396472 86396649 (16134743) + MamGypLTR1d LTR/Gypsy 565 745 (68) 3569443 310 32.0 6.3 5.1 chr15 86396962 86397019 (16134373) + MamGypLTR1d LTR/Gypsy 746 804 (9) 3569443 313 28.9 7.2 5.4 chr15 86399611 86399833 (16131559) C LTR81A LTR/Gypsy (7) 1343 1117 3569450 280 32.2 3.5 17.3 chr15 86587074 86587197 (15944195) + MamGypLTR3 LTR/Gypsy 498 599 (240) 3569790 280 32.2 3.5 17.3 chr15 86587497 86587660 (15943732) + MamGypLTR3 LTR/Gypsy 600 746 (93) 3569790 327 23.5 4.9 0.0 chr15 86597147 86597227 (15934165) + LTR81B LTR/Gypsy 1276 1360 (33) 3569808 285 27.4 16.0 1.5 chr15 86703477 86703676 (15827716) C MamGypLTR2c LTR/Gypsy (2) 920 692 3569953 304 30.9 9.6 3.0 chr15 86703966 86704132 (15827260) C MamGypLTR2c LTR/Gypsy (576) 492 315 3569953 481 31.8 4.1 1.5 chr15 86985795 86985989 (15545403) + LTR81 LTR/Gypsy 47 246 (943) 3570348 304 23.3 22.1 2.7 chr15 87032043 87032242 (15499150) C LTR81A LTR/Gypsy (964) 386 137 3570395 234 22.8 14.3 3.8 chr15 88228571 88228675 (14302717) C MamGypLTR2b LTR/Gypsy (53) 869 754 3572038 1420 30.8 8.0 8.0 chr15 88822455 88822832 (13708560) C MamGypLTR1d LTR/Gypsy (3) 810 444 3572892 1420 30.8 8.0 8.0 chr15 88823347 88823740 (13707652) C MamGypLTR1d LTR/Gypsy (370) 443 38 3572892 585 29.9 14.0 1.8 chr15 88990666 88990886 (13540506) + MamGypLTR3 LTR/Gypsy 592 839 (0) 3573185 703 29.2 18.3 4.8 chr15 89118387 89118694 (13412698) + MamGypLTR1a LTR/Gypsy 1 337 (447) 3573370 703 29.2 18.3 4.8 chr15 89118988 89119267 (13412125) + MamGypLTR1a LTR/Gypsy 338 669 (115) 3573370 253 24.8 16.5 6.8 chr15 89301764 89301993 (13229399) + MamGypLTR1c LTR/Gypsy 1 249 (554) 3573719 376 27.8 16.7 8.1 chr15 89302158 89302541 (13228851) + MamGypLTR1c LTR/Gypsy 389 805 (8) 3573719 291 29.1 14.7 9.4 chr15 89593139 89593362 (12938030) + MamGypLTR1c LTR/Gypsy 44 279 (534) 3574267 458 27.0 25.1 5.3 chr15 89593379 89593792 (12937600) + MamGypLTR1c LTR/Gypsy 308 803 (0) 3574267 225 33.3 6.6 0.7 chr15 89999848 89999998 (12531394) + MamGypLTR1c LTR/Gypsy 21 180 (623) 3574939 274 28.1 9.2 7.6 chr15 90000001 90000131 (12531261) + MamGypLTR1d LTR/Gypsy 185 317 (496) 3574940 387 22.5 13.8 2.4 chr15 90073576 90073698 (12457694) + MamGypLTR1b LTR/Gypsy 624 760 (22) 3575089 262 23.6 30.2 6.2 chr15 90476495 90476769 (12054623) C LTR81B LTR/Gypsy (0) 1393 1053 3575858 684 27.3 5.7 7.2 chr15 90477428 90477762 (12053630) C LTR81B LTR/Gypsy (943) 450 121 3575858 451 30.1 7.2 13.2 chr15 91249689 91250128 (11281264) + MamGypLTR1c LTR/Gypsy 279 676 (137) 3577496 451 31.8 8.0 12.1 chr15 91250254 91250367 (11281025) + MamGypLTR1c LTR/Gypsy 667 790 (13) 3577496 253 31.0 2.3 3.5 chr15 91581375 91581510 (10949882) + MamGypLTR1c LTR/Gypsy 511 662 (151) 3578130 873 31.9 7.0 4.6 chr15 91690474 91690970 (10840422) C MamGypLTR1d LTR/Gypsy (239) 574 66 3578344 360 28.1 11.5 2.2 chr15 91927254 91927479 (10603913) C LTR81 LTR/Gypsy (0) 1350 1104 3578731 459 34.6 7.1 4.0 chr15 91927530 91928201 (10603191) C LTR81 LTR/Gypsy (337) 1013 303 3578731 526 27.8 10.1 3.2 chr15 92057771 92057989 (10473403) + MamGypLTR1a LTR/Gypsy 1 234 (550) 3578909 468 39.8 5.3 1.1 chr15 92083658 92083939 (10447453) C MamGyp-int LTR/Gypsy (188) 4874 4581 3578955 1189 32.5 3.3 5.2 chr15 92084037 92084575 (10446817) C MamGyp-int LTR/Gypsy (612) 4450 3922 3578955 240 17.7 11.3 0.0 chr15 92084656 92084717 (10446675) + MamGypLTR2c LTR/Gypsy 863 931 (137) 3578956 343 20.6 1.4 0.0 chr15 92085283 92085355 (10446037) + MamGypLTR2b LTR/Gypsy 849 922 (0) 3578959 1919 28.2 11.9 8.1 chr15 92085698 92086512 (10444880) C MamGyp-int LTR/Gypsy (1753) 3309 2500 3578955 1919 28.2 11.9 8.1 chr15 92086544 92086848 (10444544) C MamGyp-int LTR/Gypsy (2563) 2499 2147 3578955 306 29.6 7.1 4.3 chr15 92369942 92370125 (10161267) C LTR81C LTR/Gypsy (882) 271 83 3579437 243 32.2 9.0 10.9 chr15 92728866 92729287 (9802105) C MamGypLTR2b LTR/Gypsy (506) 416 3 3579962 245 26.0 8.2 8.2 chr15 92731175 92731333 (9800059) + MamGypLTR2b LTR/Gypsy 1 159 (625) 3579964 483 25.2 6.4 2.3 chr15 92732059 92732277 (9799115) + MamGypLTR2b LTR/Gypsy 559 922 (0) 3579964 534 24.5 16.7 1.2 chr15 92862673 92862912 (9668480) C MamGypLTR2b LTR/Gypsy (0) 922 646 3580125 633 34.6 10.9 5.5 chr15 92891219 92891945 (9639447) C LTR81C LTR/Gypsy (387) 766 1 3580173 360 32.9 10.3 2.3 chr15 93038624 93038925 (9492467) C MamGypLTR1c LTR/Gypsy (0) 803 478 3580405 398 29.5 13.2 5.0 chr15 93073644 93073985 (9457407) C MamGypLTR1d LTR/Gypsy (435) 378 9 3580460 273 29.7 8.6 9.4 chr15 93133356 93133589 (9397803) C MamGypLTR3 LTR/Gypsy (195) 644 413 3580528 345 29.4 14.9 2.9 chr15 94045189 94045430 (8485962) + LTR81AB LTR/Gypsy 8 278 (0) 3582143 235 29.8 1.8 0.0 chr15 94045808 94045864 (8485528) + LTR81AB LTR/Gypsy 709 766 (627) 3582143 238 25.7 9.8 6.2 chr15 94133504 94133615 (8397777) + LTR81 LTR/Gypsy 140 255 (934) 3582274 524 27.1 4.8 8.3 chr15 94367280 94367621 (8163771) C LTR81C LTR/Gypsy (46) 1347 845 3582562 496 32.7 4.3 6.1 chr15 95189132 95189460 (7341932) C MamGypLTR1c LTR/Gypsy (16) 787 465 3583693 274 33.1 7.9 4.7 chr15 95272427 95272502 (7258890) + MamGypLTR1b LTR/Gypsy 440 513 (269) 3583811 274 33.1 7.9 4.7 chr15 95272791 95272992 (7258400) + MamGypLTR1b LTR/Gypsy 514 727 (55) 3583811 440 33.7 12.0 3.1 chr15 95890845 95891236 (6640156) C LTR81B LTR/Gypsy (0) 1393 967 3584652 237 30.2 15.2 1.2 chr15 96667644 96667814 (5863578) C LTR81A LTR/Gypsy (262) 1131 937 3585707 328 31.4 15.4 1.6 chr15 96669104 96669291 (5862101) C LTR81A LTR/Gypsy (1048) 302 89 3585707 615 27.5 12.7 4.6 chr15 96723597 96724088 (5807304) + MamGypLTR1b LTR/Gypsy 1 524 (260) 3585798 504 34.8 10.8 6.6 chr15 96978385 96978740 (5552652) C LTR81 LTR/Gypsy (35) 1118 742 3586142 504 35.7 13.9 1.1 chr15 96979064 96979157 (5552235) C LTR81 LTR/Gypsy (440) 749 656 3586142 255 30.0 7.6 6.8 chr15 97086530 97086647 (5444745) C MamGypLTR1a LTR/Gypsy (601) 183 65 3586297 261 28.9 1.8 10.1 chr15 97310539 97310707 (5220685) C MamGypLTR1b LTR/Gypsy (2) 780 626 3586592 825 32.0 15.0 3.5 chr15 97331134 97331754 (5199638) C MamGypLTR1a LTR/Gypsy (9) 775 84 3586608 1017 33.7 14.3 5.5 chr15 97800522 97801769 (4729623) + LTR81B LTR/Gypsy 1 1357 (36) 3587218 428 25.7 10.9 2.6 chr15 97904720 97904911 (4626481) + MamGypLTR1b LTR/Gypsy 573 780 (2) 3587331 293 23.9 11.0 0.0 chr15 98105489 98105597 (4425795) + LTR81AB LTR/Gypsy 129 249 (29) 3587562 250 28.1 5.0 4.3 chr15 98343844 98343984 (4187408) C MamGypLTR1c LTR/Gypsy (22) 781 640 3587909 230 33.0 13.3 4.0 chr15 98391143 98391464 (4139928) + MamGypLTR3 LTR/Gypsy 394 745 (94) 3587981 245 25.6 10.3 0.0 chr15 98607388 98607504 (3923888) + MamGypLTR1a LTR/Gypsy 398 526 (287) 3588273 628 28.5 4.2 2.1 chr15 98612431 98612670 (3918722) + MamGypLTR1b LTR/Gypsy 502 746 (36) 3588281 613 22.9 16.4 12.7 chr15 98880317 98880803 (3650589) C LTR81C LTR/Gypsy (6) 1387 773 3588670 262 29.8 10.2 3.2 chr15 98880875 98881050 (3650342) C LTR81C LTR/Gypsy (797) 596 309 3588670 372 30.9 16.4 1.4 chr15 98881060 98881279 (3650113) C LTR81C LTR/Gypsy (926) 467 215 3588670 425 23.3 0.9 0.0 chr15 98974274 98974387 (3557005) + MamGypLTR2b LTR/Gypsy 806 895 (27) 3588828 472 28.8 3.4 6.8 chr15 99105403 99105637 (3425755) C MamGypLTR1a LTR/Gypsy (543) 241 15 3589011 272 33.1 1.4 4.9 chr15 99639499 99639641 (2891751) C MamGypLTR1c LTR/Gypsy (106) 697 560 3589773 303 32.6 21.3 3.7 chr15 99836348 99836643 (2694749) C MamGypLTR3 LTR/Gypsy (344) 495 148 3590076 326 34.6 7.4 0.0 chr15 99952545 99952706 (2578686) + MamGypLTR1c LTR/Gypsy 593 766 (37) 3590226 336 13.7 6.7 2.7 chr15 99955175 99955249 (2576143) + LTR81AB LTR/Gypsy 44 121 (157) 3590231 609 27.1 9.5 5.1 chr15 100019944 100020196 (2511196) C MamGypLTR2b LTR/Gypsy (0) 922 659 3590316 428 28.6 5.2 3.1 chr15 100027067 100027257 (2504135) C MamGypLTR2c LTR/Gypsy (0) 1068 874 3590329 534 25.0 10.4 7.4 chr15 100028328 100028625 (2502767) C LTR81A LTR/Gypsy (1040) 310 4 3590335 356 30.1 9.4 7.4 chr15 100038991 100039395 (2491997) C LTR81A LTR/Gypsy (929) 421 9 3590347 627 26.9 9.6 0.5 chr15 100517161 100517369 (2014023) + MamGypLTR1a LTR/Gypsy 529 756 (28) 3591018 285 29.3 9.9 6.3 chr15 100658168 100658309 (1873083) + MamGypLTR1c LTR/Gypsy 42 188 (625) 3591154 455 20.9 27.2 5.4 chr15 100658707 100658853 (1872539) + MamGypLTR1c LTR/Gypsy 318 451 (352) 3591154 236 28.4 3.4 1.1 chr15 100659593 100659681 (1871711) + MamGypLTR1c LTR/Gypsy 710 800 (13) 3591154 225 30.1 20.1 1.4 chr15 100858168 100858376 (1673016) + MamGypLTR1b LTR/Gypsy 520 767 (15) 3591408 255 30.7 9.2 2.6 chr15 101794508 101794726 (736666) + LTR81C LTR/Gypsy 607 803 (350) 3592587 382 28.9 3.1 8.7 chr15 101856436 101856689 (674703) + MamGypLTR2b LTR/Gypsy 662 901 (21) 3592678 336 31.4 5.7 2.3 chr16 2897492 2897620 (87457133) + MamGypLTR3 LTR/Gypsy 657 788 (51) 3597398 336 31.4 5.7 2.3 chr16 2897929 2897974 (87456779) + MamGypLTR3 LTR/Gypsy 789 837 (2) 3597398 511 25.0 7.7 2.8 chr16 5323844 5324024 (85030729) + MamGypLTR1b LTR/Gypsy 590 779 (3) 3602157 481 27.4 5.4 2.4 chr16 5510681 5510848 (84843905) C LTR81A LTR/Gypsy (1177) 173 1 3602539 552 21.6 2.1 4.1 chr16 5726963 5727107 (84627646) C MamGypLTR1a LTR/Gypsy (1) 783 642 3602968 252 26.9 17.3 0.0 chr16 6033590 6033693 (84321060) C MamGypLTR1d LTR/Gypsy (29) 784 663 3603583 279 27.1 2.3 1.2 chr16 6034377 6034462 (84320291) C MamGypLTR1d LTR/Gypsy (726) 87 1 3603583 391 27.1 4.6 0.8 chr16 6443160 6443289 (83911464) C MamGypLTR1b LTR/Gypsy (0) 782 648 3604321 369 35.9 9.3 2.7 chr16 7133588 7133954 (83220799) C MamGypLTR1a LTR/Gypsy (16) 768 378 3605600 429 30.6 9.6 11.1 chr16 9116004 9116258 (81238495) + MamGypLTR1d LTR/Gypsy 466 728 (85) 3609326 429 30.6 9.6 11.1 chr16 9116562 9116639 (81238114) + MamGypLTR1d LTR/Gypsy 729 794 (19) 3609326 269 21.1 10.8 8.4 chr16 9118641 9118723 (81236030) C MamGypLTR1c LTR/Gypsy (615) 188 104 3609335 234 29.8 3.0 5.0 chr16 9154144 9154242 (81200511) C LTR81A LTR/Gypsy (1127) 223 127 3609454 385 35.7 6.0 6.0 chr16 9493961 9494311 (80860442) C MamGypLTR2c LTR/Gypsy (709) 359 21 3610258 442 28.2 6.6 10.1 chr16 10327247 10327534 (80027219) C MamGypLTR1c LTR/Gypsy (516) 287 10 3611924 236 22.8 6.5 14.0 chr16 10787929 10788035 (79566718) + MamGypLTR2b LTR/Gypsy 671 769 (153) 3612964 236 25.5 9.9 6.6 chr16 11291765 11291915 (79062838) + MamGypLTR2c LTR/Gypsy 827 982 (86) 3613951 361 27.2 8.9 3.6 chr16 12508383 12508550 (77846203) + MamGypLTR1b LTR/Gypsy 12 188 (594) 3616691 236 20.7 1.7 1.7 chr16 13288142 13288200 (77066553) C LTR81B LTR/Gypsy (1190) 203 145 3618379 238 29.8 4.1 4.1 chr16 13364714 13364811 (76989942) + MamGypLTR3 LTR/Gypsy 18 115 (724) 3618546 319 31.1 17.2 4.9 chr16 13540932 13541279 (76813474) + MamGypLTR1b LTR/Gypsy 29 419 (363) 3618895 230 30.6 4.7 3.9 chr16 13574004 13574132 (76780621) C MamGypLTR1c LTR/Gypsy (54) 749 620 3618952 418 33.0 17.1 3.2 chr16 13611268 13611577 (76743176) C LTR81 LTR/Gypsy (8) 1181 829 3619028 456 23.6 7.5 5.2 chr16 13775884 13776057 (76578696) + LTR81A LTR/Gypsy 1 178 (1172) 3619393 530 22.1 4.1 4.8 chr16 13848685 13848736 (76506017) C MamGypLTR1c LTR/Gypsy (567) 236 183 3619529 530 22.8 6.1 4.5 chr16 13849038 13849159 (76505594) C MamGypLTR1c LTR/Gypsy (596) 186 59 3619529 469 21.7 12.3 1.0 chr16 13894130 13894316 (76460437) C LTR81B LTR/Gypsy (6) 1387 1246 3619627 562 27.8 9.0 5.2 chr16 13942408 13942695 (76412058) + MamGypLTR3 LTR/Gypsy 538 836 (3) 3619732 239 31.7 5.9 9.1 chr16 13976345 13976563 (76378190) + MamGypLTR3 LTR/Gypsy 618 829 (10) 3619813 350 30.4 12.0 1.6 chr16 13990057 13990240 (76364513) C MamGypLTR1c LTR/Gypsy (15) 788 586 3619842 333 27.8 20.5 1.4 chr16 14138449 14138663 (76216090) C LTR81C LTR/Gypsy (32) 1121 866 3620131 244 21.9 12.3 0.0 chr16 14383741 14383813 (75970940) + MamGypLTR3 LTR/Gypsy 525 606 (233) 3620484 343 29.4 9.4 10.6 chr16 14502714 14502920 (75851833) + MamGypLTR1b LTR/Gypsy 457 679 (103) 3620795 343 29.4 9.4 10.6 chr16 14503223 14503287 (75851466) + MamGypLTR1b LTR/Gypsy 680 728 (54) 3620795 343 29.4 9.4 10.6 chr16 14503567 14503612 (75851141) + MamGypLTR1b LTR/Gypsy 729 771 (11) 3620795 426 23.9 5.0 2.5 chr16 15379106 15379225 (74975528) + MamGypLTR2c LTR/Gypsy 860 982 (86) 3622636 293 31.2 11.7 2.1 chr16 15822949 15823230 (74531523) + MamGypLTR1d LTR/Gypsy 504 812 (1) 3623663 446 23.1 5.0 2.5 chr16 16564564 16564683 (73790070) C MamGypLTR2c LTR/Gypsy (86) 982 860 3625458 286 29.2 6.8 6.8 chr16 16748989 16749135 (73605618) C LTR81C LTR/Gypsy (77) 1076 930 3625936 703 32.1 14.4 2.7 chr16 16914452 16914983 (73439770) + MamGypLTR1a LTR/Gypsy 129 754 (59) 3626292 407 32.4 12.8 8.2 chr16 16915499 16915548 (73439205) + MamGypLTR1a LTR/Gypsy 755 805 (8) 3626292 488 30.5 9.9 0.5 chr16 17121211 17121411 (73233342) C MamGypLTR2c LTR/Gypsy (15) 1053 834 3626686 752 30.0 7.6 0.7 chr16 17121620 17121894 (73232859) C MamGypLTR2c LTR/Gypsy (494) 574 281 3626686 288 30.9 2.7 0.0 chr16 17125032 17125141 (73229612) C MamGypLTR1d LTR/Gypsy (0) 813 701 3626692 434 34.5 1.6 4.5 chr16 17155005 17155247 (73199506) C LTR81A LTR/Gypsy (349) 1001 766 3626737 715 20.4 8.3 1.2 chr16 17156274 17156442 (73198311) C LTR81A LTR/Gypsy (1098) 252 72 3626741 504 26.1 5.8 2.9 chr16 17666834 17666971 (72687782) + MamGypLTR3 LTR/Gypsy 538 679 (160) 3627881 530 27.5 11.3 6.7 chr16 17893689 17893972 (72460781) C LTR81B LTR/Gypsy (12) 1381 1085 3628307 295 34.9 7.1 4.4 chr16 17894518 17894814 (72459939) C LTR81 LTR/Gypsy (884) 305 1 3628308 336 31.8 7.3 0.0 chr16 18057298 18057407 (72297346) C LTR81AB LTR/Gypsy (463) 690 573 3628620 371 25.9 1.6 12.4 chr16 18058045 18058293 (72296460) C LTR81AB LTR/Gypsy (1087) 306 88 3628620 440 23.1 5.0 2.5 chr16 18335016 18335135 (72019618) + MamGypLTR2c LTR/Gypsy 860 982 (86) 3629248 292 29.2 6.8 6.8 chr16 18715108 18715254 (71639499) + LTR81C LTR/Gypsy 930 1076 (77) 3630034 324 39.5 1.6 0.5 chr16 19160303 19160488 (71194265) + LTR81C LTR/Gypsy 200 387 (766) 3631131 463 28.9 1.7 8.2 chr16 19971845 19972094 (70382659) + MamGypLTR1a LTR/Gypsy 517 760 (24) 3633057 361 23.8 0.0 15.8 chr16 19972228 19972347 (70382406) + LTR81A LTR/Gypsy 119 219 (1131) 3633058 623 32.8 6.3 2.1 chr16 19973949 19974281 (70380472) + MamGypLTR2b LTR/Gypsy 573 919 (3) 3633061 271 21.5 9.0 3.6 chr16 20115163 20115273 (70239480) C MamGypLTR1b LTR/Gypsy (9) 773 657 3633409 515 30.1 11.8 4.4 chr16 20198184 20198691 (70156062) C MamGypLTR1a LTR/Gypsy (0) 784 223 3633597 243 14.3 0.0 0.0 chr16 20199236 20199277 (70155476) C MamGypLTR1b LTR/Gypsy (740) 42 1 3633599 518 32.4 16.8 5.5 chr16 20212249 20212796 (70141957) + MamGypLTR1b LTR/Gypsy 157 766 (16) 3633636 240 35.6 1.1 0.0 chr16 21723087 21723173 (68631580) C MamGypLTR3 LTR/Gypsy (442) 397 310 3636648 504 34.9 6.8 2.7 chr16 22100966 22101257 (68253496) C MamGypLTR1a LTR/Gypsy (224) 560 257 3637396 287 19.5 8.7 6.3 chr16 22101740 22101865 (68252888) C MamGypLTR1a LTR/Gypsy (527) 257 129 3637396 684 31.2 9.3 7.4 chr16 22786817 22787171 (67567582) + MamGypLTR1d LTR/Gypsy 210 593 (220) 3638901 663 27.8 10.6 3.8 chr16 22953767 22954472 (67400281) C MamGypLTR1c LTR/Gypsy (3) 781 8 3639223 251 31.1 4.5 0.8 chr16 22976541 22976673 (67378080) C MamGypLTR1d LTR/Gypsy (6) 807 670 3639271 226 37.5 0.0 0.0 chr16 23288987 23289066 (67065687) + MamGypLTR1d LTR/Gypsy 598 677 (136) 3639914 260 17.3 7.0 5.8 chr16 23290980 23291065 (67063688) + MamGypLTR2b LTR/Gypsy 835 921 (1) 3639926 309 30.6 9.5 4.8 chr16 23727901 23728089 (66626664) + MamGypLTR1c LTR/Gypsy 1 198 (605) 3640974 343 27.5 9.1 5.0 chr16 23728325 23728574 (66626179) + MamGypLTR1c LTR/Gypsy 14 451 (362) 3640976 386 29.0 10.4 3.2 chr16 23729954 23730202 (66624551) + MamGypLTR1c LTR/Gypsy 473 739 (64) 3640976 676 27.0 4.3 3.9 chr16 23815548 23815778 (66538975) C MamGypLTR1d LTR/Gypsy (581) 232 1 3641212 381 25.1 2.0 1.4 chr16 24110489 24110615 (66244138) C LTR81C LTR/Gypsy (0) 1153 1060 3641867 441 30.3 6.5 0.0 chr16 24111642 24111796 (66242957) C LTR81C LTR/Gypsy (390) 763 599 3641867 295 17.6 0.0 0.0 chr16 24136048 24136098 (66218655) C MamGypLTR1d LTR/Gypsy (8) 805 755 3641924 324 19.7 6.5 1.3 chr16 24335579 24335655 (66019098) C MamGypLTR2b LTR/Gypsy (2) 920 840 3642374 257 16.7 19.1 8.6 chr16 24394331 24394435 (65960318) C MamGypLTR3 LTR/Gypsy (563) 276 161 3642523 424 19.6 7.1 14.3 chr16 24489194 24489389 (65865364) C MamGypLTR2c LTR/Gypsy (25) 1043 862 3642747 231 27.6 3.9 4.7 chr16 24619517 24619645 (65735108) C MamGypLTR2b LTR/Gypsy (118) 804 677 3643041 586 25.0 3.5 9.7 chr16 24620036 24620292 (65734461) + MamGypLTR2b LTR/Gypsy 680 920 (2) 3643045 560 31.9 9.7 7.0 chr16 24705258 24705695 (65649058) + MamGypLTR1b LTR/Gypsy 133 572 (210) 3643279 560 31.9 9.7 7.0 chr16 24705999 24706012 (65648741) + MamGypLTR1b LTR/Gypsy 573 585 (197) 3643279 560 31.9 9.7 7.0 chr16 24706260 24706401 (65648352) + MamGypLTR1b LTR/Gypsy 586 743 (39) 3643279 314 28.6 9.7 9.7 chr16 25244656 25244835 (65109918) C MamGypLTR3 LTR/Gypsy (18) 821 638 3644464 314 28.6 9.7 9.7 chr16 25245156 25245249 (65109504) C MamGypLTR3 LTR/Gypsy (202) 637 546 3644464 579 33.8 10.7 5.5 chr16 25363008 25363115 (64991638) + MamGypLTR1a LTR/Gypsy 29 135 (649) 3644727 579 33.8 10.7 5.5 chr16 25363421 25363600 (64991153) + MamGypLTR1a LTR/Gypsy 136 306 (478) 3644727 579 33.8 10.7 5.5 chr16 25363896 25364131 (64990622) + MamGypLTR1a LTR/Gypsy 307 581 (203) 3644727 343 32.2 11.7 2.7 chr16 25653272 25653571 (64701182) C MamGypLTR3 LTR/Gypsy (11) 828 502 3645312 307 30.6 0.9 2.6 chr16 25894593 25894706 (64460047) C LTR81A LTR/Gypsy (1121) 229 118 3645776 338 25.4 3.2 12.7 chr16 25913370 25913558 (64441195) + MamGypLTR1c LTR/Gypsy 22 192 (611) 3645810 312 21.7 2.2 7.8 chr16 26740150 26740239 (63614514) C MamGypLTR1c LTR/Gypsy (591) 212 128 3647420 581 25.9 5.4 7.3 chr16 26796471 26796674 (63558079) C MamGypLTR1b LTR/Gypsy (0) 782 583 3647533 284 34.2 6.8 0.6 chr16 26797232 26797393 (63557360) C MamGypLTR1b LTR/Gypsy (273) 509 338 3647533 699 18.4 8.4 2.4 chr16 26806894 26807060 (63547693) C MamGypLTR1b LTR/Gypsy (12) 770 594 3647554 419 33.0 5.7 5.5 chr16 26887789 26888110 (63466643) + MamGypLTR2b LTR/Gypsy 10 484 (584) 3647722 439 34.0 15.2 8.4 chr16 26938084 26938349 (63416404) + MamGypLTR1c LTR/Gypsy 269 556 (247) 3647831 439 34.0 15.2 8.4 chr16 26938716 26938949 (63415804) + MamGypLTR1c LTR/Gypsy 557 803 (0) 3647831 279 20.4 1.9 0.0 chr16 27128605 27128658 (63226095) + MamGypLTR1d LTR/Gypsy 752 806 (7) 3648255 1155 36.0 5.6 2.3 chr16 27141844 27142539 (63212214) + MamGypLTR3 LTR/Gypsy 109 827 (12) 3648286 454 33.2 8.9 1.8 chr16 27188752 27189088 (63165665) C MamGypLTR1d LTR/Gypsy (1) 812 452 3648402 808 28.1 9.4 6.2 chr16 27190050 27190451 (63164302) C MamGypLTR1d LTR/Gypsy (389) 424 10 3648402 474 31.8 11.7 0.7 chr16 27302760 27303057 (63051696) + MamGypLTR1b LTR/Gypsy 273 603 (179) 3648632 284 34.0 6.5 2.0 chr16 27304101 27304253 (63050500) C MamGypLTR1b LTR/Gypsy (103) 679 520 3648634 236 40.2 0.0 0.0 chr16 27400560 27400651 (62954102) C MamGypLTR3 LTR/Gypsy (305) 534 443 3648896 266 23.1 7.5 2.5 chr16 27827532 27827611 (62527142) + MamGypLTR1c LTR/Gypsy 66 149 (654) 3649804 414 28.4 1.8 4.9 chr16 27884914 27885076 (62469677) + MamGypLTR1c LTR/Gypsy 631 788 (15) 3649910 294 34.3 4.3 0.7 chr16 27985745 27985882 (62368871) + MamGypLTR1b LTR/Gypsy 601 743 (39) 3650160 262 29.6 2.2 12.5 chr16 28247739 28247806 (62106947) + MamGypLTR1d LTR/Gypsy 1 60 (743) 3650721 267 29.3 7.4 2.6 chr16 28247953 28248103 (62106650) + MamGypLTR1d LTR/Gypsy 52 202 (611) 3650721 308 23.1 4.6 0.0 chr16 30502000 30502064 (59852689) C MamGypLTR3 LTR/Gypsy (85) 754 687 3655735 261 35.0 8.6 1.4 chr16 30883558 30883777 (59470976) + MamGypLTR1b LTR/Gypsy 341 576 (206) 3656576 307 34.2 3.5 7.6 chr16 46591497 46591784 (43762969) + MamGypLTR3 LTR/Gypsy 544 819 (20) 3662406 288 28.8 15.5 12.5 chr16 47050097 47050144 (43304609) C MamGypLTR1d LTR/Gypsy (27) 786 749 3663320 288 28.8 15.5 12.5 chr16 47050447 47050829 (43303924) C MamGypLTR1d LTR/Gypsy (65) 748 342 3663320 414 24.4 8.5 2.5 chr16 47442996 47443113 (42911640) + LTR81A LTR/Gypsy 65 189 (1161) 3663919 544 28.8 13.4 8.4 chr16 48015136 48015422 (42339331) C LTR81B LTR/Gypsy (121) 947 637 3664668 718 31.5 10.2 8.1 chr16 48015729 48016312 (42338441) C LTR81B LTR/Gypsy (527) 866 264 3664668 239 25.7 2.3 13.6 chr16 48266462 48266607 (42088146) + LTR81A LTR/Gypsy 18 151 (1199) 3665129 239 25.7 2.3 13.6 chr16 48266794 48266822 (42087931) + LTR81A LTR/Gypsy 152 173 (1177) 3665129 402 21.3 12.5 5.4 chr16 48268889 48269072 (42085681) + LTR81B LTR/Gypsy 1192 1388 (5) 3665133 923 32.5 9.8 3.3 chr16 48460521 48461071 (41893682) + LTR81 LTR/Gypsy 38 624 (565) 3665482 276 31.8 9.0 1.1 chr16 48461111 48461288 (41893465) + LTR81 LTR/Gypsy 939 1130 (263) 3665482 380 26.2 21.1 1.3 chr16 48481529 48481756 (41872997) + MamGypLTR1d LTR/Gypsy 498 770 (43) 3665543 293 29.6 12.9 2.6 chr16 48557934 48558165 (41796588) + MamGypLTR1b LTR/Gypsy 479 734 (48) 3665693 964 30.4 9.9 6.8 chr16 49038608 49039303 (41315450) + MamGypLTR3 LTR/Gypsy 72 789 (50) 3666530 348 27.8 8.7 7.5 chr16 49059111 49059292 (41295461) + MamGypLTR1c LTR/Gypsy 547 735 (68) 3666567 348 27.8 8.7 7.5 chr16 49059788 49059845 (41294908) + MamGypLTR1c LTR/Gypsy 736 790 (13) 3666567 256 22.3 3.1 7.0 chr16 49069638 49069750 (41285003) C MamGypLTR1b LTR/Gypsy (243) 541 432 3666578 227 26.6 11.7 3.1 chr16 49158881 49159008 (41195745) C LTR81A LTR/Gypsy (28) 1322 1184 3666728 294 28.0 14.8 4.0 chr16 49162786 49162934 (41191819) + MamGypLTR1a LTR/Gypsy 618 782 (2) 3666733 462 30.3 16.5 2.7 chr16 49442913 49443136 (40911617) C MamGypLTR1b LTR/Gypsy (0) 782 528 3667166 269 31.4 7.6 1.3 chr16 49443256 49443413 (40911340) C MamGypLTR1b LTR/Gypsy (578) 204 37 3667166 478 32.0 11.7 8.7 chr16 50543974 50544081 (39810672) + MamGypLTR1b LTR/Gypsy 111 213 (569) 3669266 478 32.0 11.7 8.7 chr16 50544273 50544556 (39810197) + MamGypLTR1b LTR/Gypsy 214 515 (267) 3669266 250 22.1 3.6 8.3 chr16 50552270 50552353 (39802400) + MamGypLTR1b LTR/Gypsy 703 782 (0) 3669266 314 33.7 10.3 3.8 chr16 50705549 50705838 (39648915) C MamGypLTR3 LTR/Gypsy (34) 805 497 3669565 374 26.6 3.2 0.8 chr16 50898294 50898418 (39456335) + MamGypLTR1b LTR/Gypsy 644 771 (11) 3669884 470 28.2 7.0 6.2 chr16 51235335 51235455 (39119298) C MamGypLTR3 LTR/Gypsy (52) 787 670 3670501 470 28.2 7.0 6.2 chr16 51235649 51235768 (39118985) C MamGypLTR3 LTR/Gypsy (170) 669 544 3670501 263 32.4 13.3 0.0 chr16 52017762 52017866 (38336887) C MamGypLTR1d LTR/Gypsy (0) 813 695 3671796 263 31.1 2.3 9.8 chr16 52018228 52018359 (38336394) C MamGypLTR2c LTR/Gypsy (733) 335 214 3671797 318 30.6 10.4 9.4 chr16 52083850 52084156 (38270597) C MamGypLTR1c LTR/Gypsy (452) 351 42 3671891 243 31.2 4.0 8.0 chr16 52159520 52159794 (38194959) + MamGypLTR1c LTR/Gypsy 3 266 (537) 3672000 231 29.4 5.6 0.7 chr16 52201816 52201959 (38152794) + MamGypLTR2c LTR/Gypsy 40 190 (878) 3672067 407 28.2 4.6 2.0 chr16 52244974 52245125 (38109628) C LTR81C LTR/Gypsy (54) 1099 944 3672146 366 26.4 14.8 3.5 chr16 52253591 52253759 (38100994) + MamGypLTR1a LTR/Gypsy 48 235 (549) 3672161 255 25.4 16.8 2.2 chr16 52253986 52254122 (38100631) + MamGypLTR1a LTR/Gypsy 600 758 (26) 3672161 240 30.6 0.0 0.0 chr16 52322809 52322870 (38031883) + MamGypLTR1c LTR/Gypsy 509 570 (233) 3672267 271 28.7 3.6 2.9 chr16 52421426 52421565 (37933188) C MamGypLTR1c LTR/Gypsy (5) 798 658 3672417 293 31.1 5.8 4.3 chr16 52727149 52727286 (37627467) C MamGypLTR3 LTR/Gypsy (27) 812 673 3672875 300 26.9 2.1 1.1 chr16 52805050 52805143 (37549610) C MamGypLTR2b LTR/Gypsy (0) 922 828 3673018 590 26.1 9.3 5.6 chr16 52810524 52810791 (37543962) C MamGypLTR1a LTR/Gypsy (8) 776 499 3673030 226 27.6 4.0 2.0 chr16 52903688 52903787 (37450966) + MamGypLTR2b LTR/Gypsy 821 922 (0) 3673200 318 26.9 13.1 8.5 chr16 53032124 53032322 (37322431) + MamGypLTR1a LTR/Gypsy 1 208 (576) 3673439 403 23.5 4.4 6.1 chr16 53566093 53566286 (36788467) C LTR81A LTR/Gypsy (1184) 209 18 3674445 238 29.4 12.7 4.8 chr16 54597236 54597464 (35757289) + LTR81C LTR/Gypsy 117 363 (987) 3676147 416 28.8 13.7 6.0 chr16 54597574 54598144 (35756609) + LTR81C LTR/Gypsy 507 1336 (14) 3676147 597 29.2 5.7 4.8 chr16 54631371 54631704 (35723049) C MamGypLTR2c LTR/Gypsy (2) 1066 730 3676209 692 29.4 11.7 2.2 chr16 55222415 55222882 (35131871) + MamGypLTR1a LTR/Gypsy 7 523 (259) 3677283 431 27.0 3.6 0.1 chr16 55222931 55223071 (35131682) + MamGypLTR1a LTR/Gypsy 625 789 (14) 3677283 230 29.2 5.6 0.0 chr16 55319123 55319211 (35035542) + MamGypLTR2c LTR/Gypsy 295 388 (680) 3677479 289 28.9 1.1 1.1 chr16 55451122 55451212 (34903541) C LTR81C LTR/Gypsy (10) 1383 1293 3677717 239 34.9 0.0 0.0 chr16 55451355 55451437 (34903316) C LTR81C LTR/Gypsy (311) 1039 957 3677717 524 31.2 4.4 4.0 chr16 55451568 55451794 (34902959) C LTR81C LTR/Gypsy (925) 228 1 3677717 430 32.4 14.3 1.5 chr16 55724249 55724576 (34630177) C MamGypLTR1c LTR/Gypsy (10) 793 424 3678154 325 23.3 4.3 3.2 chr16 55724946 55725038 (34629715) C MamGypLTR1c LTR/Gypsy (658) 145 52 3678154 234 36.6 1.8 0.9 chr16 55910356 55910468 (34444285) + LTR81 LTR/Gypsy 166 279 (910) 3678495 548 25.5 13.5 4.1 chr16 55911003 55911247 (34443506) + LTR81 LTR/Gypsy 792 1059 (130) 3678496 462 30.0 12.6 5.7 chr16 56461689 56462094 (33892659) + MamGypLTR1b LTR/Gypsy 342 775 (7) 3679321 340 30.6 6.2 6.2 chr16 57339504 57339712 (33015041) + MamGypLTR1b LTR/Gypsy 449 657 (125) 3681021 242 23.3 14.3 1.9 chr16 57626270 57626374 (32728379) C MamGypLTR1b LTR/Gypsy (25) 757 640 3681591 364 31.4 25.3 1.2 chr16 59324963 59325207 (31029546) + MamGypLTR3 LTR/Gypsy 488 791 (48) 3684750 781 33.4 6.9 4.7 chr16 61230215 61230679 (29124074) C MamGypLTR3 LTR/Gypsy (9) 830 356 3687594 269 26.2 9.6 1.9 chr16 61583363 61583524 (28771229) C MamGypLTR1c LTR/Gypsy (560) 222 53 3688133 372 28.4 12.1 4.3 chr16 62270494 62270633 (28084120) C MamGypLTR1b LTR/Gypsy (107) 675 525 3689218 233 31.2 10.3 7.3 chr16 62272621 62272824 (28081929) C MamGypLTR1b LTR/Gypsy (567) 215 6 3689218 559 30.0 3.7 4.4 chr16 63094322 63094593 (27260160) C LTR81A LTR/Gypsy (7) 1343 1074 3690426 409 29.0 1.6 4.7 chr16 64967645 64967836 (25386917) + MamGypLTR1a LTR/Gypsy 1 186 (598) 3693250 260 25.4 13.2 8.6 chr16 66357393 66357612 (23997141) C MamGypLTR1a LTR/Gypsy (349) 435 206 3695540 439 26.5 2.5 0.8 chr16 66895687 66895804 (23458949) + MamGypLTR1a LTR/Gypsy 657 776 (8) 3696594 245 16.7 10.0 2.5 chr16 67450838 67450917 (22903836) C MamGypLTR1a LTR/Gypsy (38) 746 661 3697554 444 28.8 12.4 1.1 chr16 67451391 67451657 (22903096) C MamGypLTR1a LTR/Gypsy (385) 399 103 3697556 429 36.6 4.6 1.4 chr16 67537657 67537936 (22816817) C MamGypLTR1c LTR/Gypsy (225) 578 290 3697696 342 34.3 2.8 0.0 chr16 67543220 67543362 (22811391) + MamGypLTR1a LTR/Gypsy 283 429 (355) 3697713 275 28.2 6.3 0.9 chr16 71109529 71109639 (19245114) + LTR81C LTR/Gypsy 109 225 (928) 3704852 532 34.3 6.1 4.9 chr16 71167139 71167466 (19187287) + MamGypLTR1b LTR/Gypsy 450 781 (1) 3704929 357 29.8 14.1 6.4 chr16 71167612 71167923 (19186830) + MamGyp-int LTR/Gypsy 185 520 (4542) 3704930 308 33.7 4.5 3.1 chr16 71372268 71372478 (18982275) C MamGypLTR2c LTR/Gypsy (434) 379 194 3705240 421 20.1 18.7 3.7 chr16 71383470 71383603 (18971150) C LTR81C LTR/Gypsy (3) 1150 997 3705266 353 26.8 10.0 2.3 chr16 71626809 71626938 (18727815) C LTR81A LTR/Gypsy (1127) 223 84 3705697 331 30.9 10.7 4.2 chr16 72208121 72208428 (18146325) C MamGypLTR2c LTR/Gypsy (28) 1040 713 3706748 242 32.1 8.4 2.1 chr16 73761335 73761477 (16593276) + LTR81C LTR/Gypsy 933 1084 (69) 3709000 493 27.8 21.3 0.7 chr16 73875510 73875795 (16478958) + LTR81B LTR/Gypsy 1049 1393 (0) 3709168 254 20.2 8.1 2.3 chr16 74106955 74107040 (16247713) C MamGypLTR1b LTR/Gypsy (641) 141 51 3709478 340 25.6 1.1 0.0 chr16 74256458 74256547 (16098206) C LTR81A LTR/Gypsy (1114) 236 146 3709750 286 27.3 5.1 7.9 chr16 75002963 75003147 (15351606) + MamGypLTR1a LTR/Gypsy 594 783 (1) 3711279 459 25.3 4.7 0.6 chr16 76369981 76370151 (13984602) + MamGypLTR2b LTR/Gypsy 741 918 (4) 3713657 470 27.3 9.1 0.0 chr16 76378658 76378811 (13975942) C LTR81 LTR/Gypsy (184) 1005 838 3713668 230 32.0 1.0 0.0 chr16 76769547 76769643 (13585110) + MamGypLTR1c LTR/Gypsy 693 790 (13) 3714214 304 34.9 5.3 3.2 chr16 76837086 76837331 (13517422) + LTR81A LTR/Gypsy 67 317 (1033) 3714283 254 18.2 7.3 2.9 chr16 77267504 77267571 (13087182) + MamGypLTR1d LTR/Gypsy 260 330 (483) 3714915 320 24.3 7.9 2.6 chr16 77268488 77268548 (13086205) + MamGypLTR1d LTR/Gypsy 694 758 (55) 3714915 320 24.3 7.9 2.6 chr16 77268928 77268979 (13085774) + MamGypLTR1d LTR/Gypsy 759 813 (0) 3714915 249 20.8 8.3 0.0 chr16 77802297 77802368 (12552385) C MamGypLTR1b LTR/Gypsy (7) 775 698 3715837 498 31.1 7.6 3.2 chr16 77802538 77802786 (12551967) C MamGypLTR1b LTR/Gypsy (252) 530 271 3715837 287 23.5 9.2 2.3 chr16 78094761 78094847 (12259906) C MamGypLTR3 LTR/Gypsy (602) 237 145 3716405 261 34.0 13.6 1.6 chr16 81246554 81246870 (9107883) + MamGypLTR1a LTR/Gypsy 374 728 (56) 3721901 242 24.5 0.0 0.0 chr16 82122994 82123042 (8231711) C MamGypLTR1b LTR/Gypsy (323) 459 411 3723722 626 32.4 6.1 4.3 chr16 82212510 82212902 (8141851) C MamGypLTR1a LTR/Gypsy (1) 783 384 3723883 605 28.2 11.2 4.0 chr16 82212926 82213221 (8141532) C MamGypLTR1a LTR/Gypsy (463) 321 5 3723883 584 31.4 9.3 4.5 chr16 82474307 82474616 (7880137) C MamGypLTR1b LTR/Gypsy (0) 782 458 3724299 417 28.7 0.8 9.0 chr16 82475691 82475935 (7878818) C MamGypLTR1b LTR/Gypsy (542) 240 16 3724299 294 27.7 9.6 3.4 chr16 82839441 82839649 (7515104) C MamGypLTR1c LTR/Gypsy (6) 797 576 3724907 472 26.0 17.8 2.4 chr16 82911879 82912091 (7442662) C LTR81B LTR/Gypsy (1146) 247 2 3725021 280 29.9 2.2 5.2 chr16 83878366 83878499 (6476254) C LTR81B LTR/Gypsy (234) 1159 1030 3726718 229 28.2 2.4 4.9 chr16 83881025 83881147 (6473606) C LTR81AB LTR/Gypsy (158) 120 1 3726725 232 20.0 17.0 7.4 chr16 84599853 84599987 (5754766) + MamGypLTR1b LTR/Gypsy 297 444 (338) 3728087 277 31.2 13.7 3.2 chr16 84836933 84837180 (5517573) + LTR81B LTR/Gypsy 7 280 (1113) 3728583 270 24.3 8.1 10.5 chr16 84987033 84987156 (5367597) + LTR81AB LTR/Gypsy 99 219 (59) 3728879 383 31.6 3.2 5.1 chr16 86053013 86053229 (4301524) C MamGypLTR3 LTR/Gypsy (82) 757 545 3730787 341 27.7 13.5 2.4 chr16 86293229 86293398 (4061355) + MamGypLTR1c LTR/Gypsy 359 547 (256) 3731231 338 27.7 9.7 2.8 chr16 86519401 86519545 (3835208) C LTR81A LTR/Gypsy (1139) 211 57 3731638 244 26.2 1.2 3.6 chr16 86670567 86670649 (3684104) + MamGypLTR3 LTR/Gypsy 260 340 (499) 3731865 514 30.2 8.5 2.4 chr16 87242020 87242314 (3112439) + MamGypLTR2c LTR/Gypsy 739 1051 (17) 3732879 248 14.6 1.8 1.8 chr16 87242327 87242382 (3112371) + MamGypLTR1b LTR/Gypsy 688 743 (39) 3732880 509 31.8 5.3 5.6 chr17 133211 133586 (81061624) C MamGypLTR1b LTR/Gypsy (29) 753 379 3737575 686 34.8 12.8 3.3 chr17 401882 401970 (80793240) C MamGypLTR2c LTR/Gypsy (292) 776 680 3737895 686 34.8 12.8 3.3 chr17 402571 403164 (80792046) C MamGypLTR2c LTR/Gypsy (398) 670 17 3737895 763 29.2 12.5 5.0 chr17 1111413 1111876 (80083334) + MamGypLTR3 LTR/Gypsy 176 674 (165) 3739183 236 17.3 0.0 3.7 chr17 1207690 1207743 (79987467) + MamGypLTR2c LTR/Gypsy 290 341 (727) 3739420 485 28.3 7.8 4.2 chr17 1233229 1233420 (79961790) + MamGypLTR1b LTR/Gypsy 498 696 (86) 3739469 458 17.2 2.1 0.0 chr17 2444325 2444417 (78750793) C MamGypLTR2b LTR/Gypsy (51) 871 777 3741866 397 28.2 2.3 0.8 chr17 2705240 2705371 (78489839) C MamGypLTR1c LTR/Gypsy (669) 134 1 3742452 342 29.0 8.2 1.4 chr17 2906524 2906670 (78288540) C MamGypLTR1b LTR/Gypsy (3) 781 625 3742878 427 28.4 3.3 5.0 chr17 2906933 2907136 (78288074) C MamGypLTR1b LTR/Gypsy (519) 263 49 3742878 545 35.0 0.0 1.5 chr17 4324151 4324356 (76870854) C MamGypLTR3 LTR/Gypsy (391) 448 246 3745371 638 27.5 5.5 14.7 chr17 5537265 5537619 (75657591) C MamGypLTR3 LTR/Gypsy (38) 801 471 3747722 638 27.5 5.5 14.7 chr17 5537923 5538001 (75657209) C MamGypLTR3 LTR/Gypsy (369) 470 407 3747722 244 31.3 6.9 9.9 chr17 5702464 5702825 (75492385) + MamGypLTR1d LTR/Gypsy 68 418 (395) 3748043 237 26.1 7.1 1.4 chr17 5702818 5702887 (75492323) + MamGypLTR1c LTR/Gypsy 314 387 (416) 3748044 385 23.5 4.2 10.8 chr17 5718577 5718743 (75476467) C MamGypLTR2c LTR/Gypsy (3) 1065 910 3748072 914 30.7 6.7 7.3 chr17 5776443 5776934 (75418276) C MamGypLTR1c LTR/Gypsy (282) 521 33 3748175 623 33.4 11.1 5.7 chr17 5845098 5845712 (75349498) C MamGypLTR1b LTR/Gypsy (6) 776 129 3748301 227 20.4 5.6 0.0 chr17 5845804 5845857 (75349353) C MamGypLTR1b LTR/Gypsy (707) 75 19 3748301 735 32.8 6.5 7.1 chr17 5849957 5850462 (75344748) + LTR81 LTR/Gypsy 110 773 (620) 3748309 973 22.5 3.0 8.6 chr17 5850616 5850917 (75344293) + LTR81C LTR/Gypsy 822 1106 (47) 3748310 394 19.1 7.1 2.6 chr17 6104040 6104152 (75091058) + MamGypLTR1d LTR/Gypsy 681 798 (15) 3748776 326 23.6 21.9 1.4 chr17 6238856 6239001 (74956209) + MamGypLTR1a LTR/Gypsy 62 237 (547) 3749054 294 17.6 8.6 8.6 chr17 6239258 6239350 (74955860) C MamGypLTR1b LTR/Gypsy (27) 786 679 3749056 386 34.3 10.1 3.8 chr17 6966806 6967417 (74227793) + MamGypLTR2c LTR/Gypsy 6 656 (412) 3750264 354 31.9 7.1 1.1 chr17 6967502 6967685 (74227525) + MamGypLTR2c LTR/Gypsy 825 1019 (49) 3750264 407 20.7 6.6 0.8 chr17 8068511 8068632 (73126578) + MamGypLTR2b LTR/Gypsy 773 901 (21) 3752194 508 29.3 2.8 1.1 chr17 8236718 8236893 (72958317) C MamGypLTR1d LTR/Gypsy (286) 527 349 3752555 291 21.2 3.8 5.7 chr17 8553854 8553958 (72641252) C LTR81 LTR/Gypsy (4) 1185 1083 3753105 369 25.6 4.1 13.4 chr17 8554383 8554576 (72640634) C LTR81A LTR/Gypsy (172) 1178 1003 3753108 239 24.5 9.1 9.1 chr17 8650049 8650169 (72545041) C MamGypLTR1d LTR/Gypsy (386) 427 307 3753305 533 23.3 13.7 4.7 chr17 8704324 8704535 (72490675) C MamGypLTR2b LTR/Gypsy (106) 816 586 3753401 364 21.7 11.2 0.9 chr17 10266401 10266516 (70928694) + MamGypLTR1d LTR/Gypsy 12 139 (674) 3756377 539 30.1 2.4 10.6 chr17 10266655 10266947 (70928263) + MamGypLTR1d LTR/Gypsy 130 398 (405) 3756377 638 28.1 4.1 1.5 chr17 10266952 10267146 (70928064) + MamGypLTR1d LTR/Gypsy 614 813 (0) 3756377 293 31.9 1.2 10.6 chr17 10750632 10750792 (70444418) C MamGypLTR1c LTR/Gypsy (206) 597 452 3757142 367 24.7 5.1 7.4 chr17 10794382 10794556 (70400654) C MamGypLTR2b LTR/Gypsy (0) 922 752 3757222 404 29.8 0.9 0.0 chr17 11079843 11079956 (70115254) C MamGypLTR2c LTR/Gypsy (75) 993 879 3757710 314 31.2 13.0 6.0 chr17 11124175 11124474 (70070736) C LTR81B LTR/Gypsy (0) 1393 1073 3757787 673 24.1 4.4 9.9 chr17 11125138 11125431 (70069779) C LTR81B LTR/Gypsy (1112) 281 4 3757787 517 20.0 10.8 0.0 chr17 11281862 11281991 (69913219) C LTR81B LTR/Gypsy (1147) 246 103 3758058 372 30.4 7.1 8.9 chr17 11472315 11472764 (69722446) + LTR81A LTR/Gypsy 6 381 (969) 3758368 288 24.1 21.6 0.0 chr17 11494547 11494588 (69700622) C MamGypLTR2c LTR/Gypsy (123) 945 900 3758411 288 24.1 21.6 0.0 chr17 11494937 11495009 (69700201) C MamGypLTR2c LTR/Gypsy (169) 899 806 3758411 552 33.0 8.4 4.1 chr17 11495838 11496327 (69698883) C MamGypLTR2c LTR/Gypsy (539) 529 19 3758411 383 24.2 7.4 11.7 chr17 11733135 11733386 (69461824) C MamGypLTR2c LTR/Gypsy (40) 1028 664 3758779 565 36.8 4.1 5.3 chr17 12138644 12138982 (69056228) C MamGypLTR1b LTR/Gypsy (59) 723 389 3759418 446 38.0 9.4 6.8 chr17 12334098 12335022 (68860188) C LTR81A LTR/Gypsy (282) 1068 204 3759718 416 29.9 16.9 6.4 chr17 12421383 12421743 (68773467) C MamGypLTR2b LTR/Gypsy (24) 898 500 3759863 326 23.8 2.8 2.8 chr17 12453713 12453820 (68741390) C MamGypLTR1d LTR/Gypsy (26) 787 680 3759912 259 29.4 13.8 2.1 chr17 12932938 12933125 (68262085) C MamGypLTR1c LTR/Gypsy (593) 210 1 3760694 604 29.8 9.2 7.3 chr17 13023977 13024291 (68170919) C MamGypLTR1a LTR/Gypsy (376) 408 88 3760878 533 23.2 4.2 7.0 chr17 13088338 13088550 (68106660) C LTR81B LTR/Gypsy (1183) 210 4 3760980 794 32.6 15.4 4.6 chr17 13178312 13179356 (68015854) C LTR81C LTR/Gypsy (1) 1392 4 3761121 271 31.6 2.6 0.9 chr17 13237275 13237389 (67957821) + LTR81C LTR/Gypsy 1036 1152 (1) 3761207 309 21.0 8.6 0.0 chr17 13238777 13238857 (67956353) + LTR81B LTR/Gypsy 130 217 (1176) 3761209 270 26.4 6.4 0.0 chr17 13365018 13365127 (67830083) + MamGypLTR1c LTR/Gypsy 674 790 (13) 3761421 237 24.1 3.6 6.0 chr17 13517456 13517539 (67677671) + MamGypLTR2b LTR/Gypsy 815 896 (26) 3761655 247 30.2 2.0 2.0 chr17 13553996 13554093 (67641117) + MamGypLTR1d LTR/Gypsy 9 106 (707) 3761729 226 27.1 5.8 1.2 chr17 13611892 13611977 (67583233) + MamGypLTR1c LTR/Gypsy 51 140 (663) 3761809 233 30.0 0.0 0.0 chr17 13612271 13612330 (67582880) + MamGypLTR1c LTR/Gypsy 369 428 (375) 3761809 422 25.5 4.0 3.3 chr17 13805778 13805927 (67389283) C MamGypLTR1b LTR/Gypsy (10) 772 622 3762139 310 35.0 0.8 1.7 chr17 13902844 13902962 (67292248) + MamGypLTR1c LTR/Gypsy 339 456 (347) 3762301 256 24.4 8.7 3.5 chr17 13903443 13903613 (67291597) + MamGypLTR1c LTR/Gypsy 619 897 (25) 3762301 266 31.9 5.3 1.2 chr17 13952230 13952400 (67242810) + MamGypLTR1c LTR/Gypsy 377 554 (249) 3762386 605 27.9 12.4 1.4 chr17 14366408 14366690 (66828520) C MamGypLTR1a LTR/Gypsy (469) 315 2 3763032 789 23.6 9.4 3.7 chr17 14521711 14522009 (66673201) C LTR81C LTR/Gypsy (0) 1153 838 3763275 717 36.1 8.2 0.5 chr17 14522084 14522500 (66672710) C LTR81C LTR/Gypsy (470) 683 235 3763275 407 31.6 7.4 1.1 chr17 14530256 14530431 (66664779) + MamGypLTR2c LTR/Gypsy 54 240 (828) 3763288 389 29.1 1.6 11.0 chr17 14531602 14531725 (66663485) + MamGypLTR2c LTR/Gypsy 838 945 (123) 3763288 389 29.1 1.6 11.0 chr17 14532036 14532165 (66663045) + MamGypLTR2c LTR/Gypsy 946 1068 (0) 3763288 312 32.4 8.2 7.4 chr17 14537706 14537871 (66657339) C LTR81B LTR/Gypsy (3) 1390 1217 3763300 312 30.8 8.2 6.3 chr17 14538030 14538252 (66656958) C LTR81B LTR/Gypsy (177) 1216 776 3763300 231 27.3 5.3 4.7 chr17 14538773 14538922 (66656288) C LTR81B LTR/Gypsy (1103) 290 140 3763300 362 33.5 1.7 2.8 chr17 14752588 14752765 (66442445) + MamGypLTR1b LTR/Gypsy 493 668 (114) 3763655 357 27.0 10.5 8.1 chr17 14861315 14861534 (66333676) + LTR81C LTR/Gypsy 878 1159 (234) 3763793 310 28.5 4.8 1.6 chr17 14995099 14995223 (66199987) C MamGypLTR3 LTR/Gypsy (51) 788 660 3764007 237 35.8 1.4 2.1 chr17 15008349 15008488 (66186722) C MamGypLTR3 LTR/Gypsy (16) 823 685 3764027 310 31.4 2.1 2.8 chr17 15041855 15041998 (66153212) C LTR81A LTR/Gypsy (1172) 178 36 3764078 516 35.7 9.3 4.9 chr17 15057937 15058685 (66136525) C MamGypLTR1b LTR/Gypsy (0) 782 1 3764095 260 31.6 2.0 2.0 chr17 15085590 15085689 (66109521) C MamGypLTR2c LTR/Gypsy (674) 394 295 3764145 237 28.0 9.7 7.1 chr17 15399465 15399618 (65795592) + MamGypLTR2c LTR/Gypsy 422 579 (489) 3764616 231 33.3 2.1 0.0 chr17 16523711 16523806 (64671404) C MamGypLTR2c LTR/Gypsy (617) 451 354 3766711 241 28.0 10.3 0.0 chr17 17254283 17254389 (63940821) C MamGypLTR2c LTR/Gypsy (735) 333 216 3767870 305 22.1 6.6 1.9 chr17 17257783 17257888 (63937322) + LTR81A LTR/Gypsy 1108 1218 (132) 3767871 228 24.7 10.4 3.1 chr17 17568819 17568914 (63626296) + MamGypLTR1a LTR/Gypsy 21 123 (661) 3768460 564 25.2 2.5 3.1 chr17 17568950 17569076 (63626134) + MamGypLTR1a LTR/Gypsy 600 728 (56) 3768460 564 26.6 2.6 2.5 chr17 17569388 17569443 (63625767) + MamGypLTR1a LTR/Gypsy 729 803 (0) 3768460 290 32.4 1.7 3.5 chr17 17807640 17807754 (63387456) + MamGypLTR3 LTR/Gypsy 722 834 (5) 3768857 275 32.5 13.9 7.1 chr17 17979594 17979916 (63215294) C MamGypLTR1a LTR/Gypsy (2) 782 427 3769188 275 32.5 13.9 7.1 chr17 17980223 17980279 (63214931) C MamGypLTR1a LTR/Gypsy (358) 426 376 3769188 450 29.7 10.0 6.2 chr17 18387580 18387899 (62807311) C MamGypLTR2c LTR/Gypsy (29) 1039 708 3769917 353 32.9 4.9 4.9 chr17 18388216 18388480 (62806730) C LTR81C LTR/Gypsy (880) 273 9 3769918 244 22.6 0.0 0.0 chr17 18972874 18972935 (62222275) + MamGypLTR1c LTR/Gypsy 714 794 (9) 3770972 244 22.6 0.0 0.0 chr17 19085887 19085948 (62109262) C MamGypLTR1c LTR/Gypsy (9) 794 714 3771280 244 22.6 0.0 0.0 chr17 19098939 19099000 (62096210) + MamGypLTR1c LTR/Gypsy 714 794 (9) 3771323 290 25.2 3.6 3.6 chr17 19958901 19959011 (61236199) C MamGypLTR2b LTR/Gypsy (2) 920 810 3772998 327 33.7 5.2 3.6 chr17 20362478 20362729 (60832481) + LTR81C LTR/Gypsy 18 273 (880) 3773610 393 29.6 10.3 6.4 chr17 20363046 20363356 (60831854) + MamGypLTR2c LTR/Gypsy 708 1030 (38) 3773611 248 29.0 1.1 2.1 chr17 20717704 20717798 (60477412) + MamGypLTR2b LTR/Gypsy 35 128 (940) 3774231 497 19.6 3.8 2.4 chr17 20718100 20718250 (60476960) + MamGypLTR2b LTR/Gypsy 620 893 (29) 3774231 359 19.1 3.6 0.0 chr17 25669373 25669456 (55525754) C MamGypLTR1d LTR/Gypsy (726) 87 1 3777048 299 30.6 6.2 0.0 chr17 25965690 25965849 (55229361) C MamGypLTR2c LTR/Gypsy (38) 1030 861 3777635 286 32.8 5.6 3.6 chr17 25966319 25966568 (55228642) C LTR81C LTR/Gypsy (881) 272 18 3777636 444 30.3 8.4 6.8 chr17 26073550 26073857 (55121353) C MamGypLTR2c LTR/Gypsy (29) 1039 727 3777774 239 25.6 17.9 0.0 chr17 27540301 27540417 (53654793) C MamGypLTR1d LTR/Gypsy (603) 210 73 3780421 864 31.3 6.2 6.5 chr17 28363837 28364270 (52830940) + MamGypLTR2c LTR/Gypsy 99 531 (537) 3782087 921 30.6 6.2 2.2 chr17 28646557 28646924 (52548286) + MamGypLTR1a LTR/Gypsy 73 455 (329) 3782605 251 30.8 18.0 5.4 chr17 29885391 29885668 (51309542) C MamGypLTR1b LTR/Gypsy (324) 458 146 3785041 250 23.2 4.2 2.8 chr17 29983683 29983753 (51211457) C LTR81AB LTR/Gypsy (19) 259 188 3785243 684 30.4 6.6 9.3 chr17 30172174 30172569 (51022641) C MamGypLTR1c LTR/Gypsy (365) 438 54 3785668 314 31.1 5.2 6.4 chr17 31645677 31645927 (49549283) + MamGypLTR3 LTR/Gypsy 51 298 (541) 3788579 471 32.7 11.1 1.4 chr17 31997059 31997266 (49197944) + MamGypLTR1b LTR/Gypsy 392 619 (163) 3789219 315 29.9 2.5 1.7 chr17 32497956 32498074 (48697136) C MamGypLTR3 LTR/Gypsy (3) 836 717 3790084 383 26.4 3.2 6.5 chr17 32574445 32574598 (48620612) C MamGypLTR3 LTR/Gypsy (27) 812 664 3790205 243 32.6 8.6 4.6 chr17 32974263 32974413 (48220797) + MamGypLTR3 LTR/Gypsy 633 789 (50) 3790862 332 29.4 16.2 4.3 chr17 33511038 33511339 (47683871) C MamGypLTR2c LTR/Gypsy (0) 1068 731 3791887 345 29.3 17.0 5.7 chr17 33511762 33512079 (47683131) C MamGypLTR2c LTR/Gypsy (506) 562 209 3791887 326 30.5 5.1 3.5 chr17 34085068 34085264 (47109946) C MamGypLTR2c LTR/Gypsy (9) 1059 860 3792728 231 28.4 9.9 1.8 chr17 34227709 34227819 (46967391) + MamGypLTR2c LTR/Gypsy 949 1068 (0) 3793024 276 30.6 10.3 5.2 chr17 34303430 34303584 (46891626) + MamGypLTR1c LTR/Gypsy 626 788 (15) 3793164 385 23.4 8.6 3.1 chr17 34444225 34444352 (46750858) C MamGypLTR2c LTR/Gypsy (9) 1059 925 3793383 371 35.9 6.1 5.8 chr17 35071361 35071653 (46123557) + MamGypLTR1c LTR/Gypsy 502 795 (8) 3794385 392 29.3 7.3 2.0 chr17 36154962 36155111 (45040099) + MamGypLTR1d LTR/Gypsy 647 804 (9) 3796345 339 24.1 5.2 0.4 chr17 37233675 37233798 (43961412) + MamGypLTR1d LTR/Gypsy 672 813 (0) 3798584 282 36.7 2.5 0.8 chr17 37253485 37253605 (43941605) + MamGypLTR1b LTR/Gypsy 465 587 (195) 3798628 359 28.3 7.0 2.8 chr17 38827688 38827829 (42367381) C MamGypLTR1c LTR/Gypsy (309) 494 347 3801631 254 25.4 0.0 0.0 chr17 38828209 38828263 (42366947) C MamGypLTR1c LTR/Gypsy (682) 121 67 3801631 281 24.2 7.4 4.2 chr17 39474588 39474682 (41720528) + LTR81B LTR/Gypsy 99 196 (1197) 3802618 294 24.2 5.4 6.0 chr17 39474967 39475133 (41720077) + MamGypLTR2b LTR/Gypsy 757 922 (0) 3802619 579 32.6 6.3 2.6 chr17 39736536 39736803 (41458407) C MamGypLTR1b LTR/Gypsy (150) 632 355 3803010 701 31.2 11.7 2.9 chr17 39839852 39840366 (41354844) C MamGypLTR1a LTR/Gypsy (19) 765 169 3803189 426 31.1 4.7 5.0 chr17 40188741 40189018 (41006192) + MamGypLTR1b LTR/Gypsy 497 773 (9) 3803912 303 22.1 13.2 1.9 chr17 41760395 41760500 (39434710) + MamGypLTR1d LTR/Gypsy 695 812 (1) 3807150 276 36.0 6.2 5.3 chr17 41921848 41922055 (39273155) C MamGypLTR2b LTR/Gypsy (697) 225 16 3807477 232 22.6 12.9 0.0 chr17 43776330 43776391 (37418819) + LTR81 LTR/Gypsy 215 284 (905) 3811269 235 32.3 6.6 4.4 chr17 45466797 45466932 (35728278) C MamGypLTR3 LTR/Gypsy (452) 387 249 3814447 496 30.9 20.7 2.3 chr17 48417548 48417938 (32777272) + MamGypLTR3 LTR/Gypsy 377 839 (0) 3819834 237 30.2 1.9 6.8 chr17 48620546 48620648 (32574562) C MamGypLTR1a LTR/Gypsy (36) 748 651 3820227 253 24.0 6.7 0.0 chr17 48849756 48849830 (32345380) + MamGypLTR2c LTR/Gypsy 466 545 (523) 3820598 280 24.5 23.6 1.6 chr17 48861579 48861723 (32333487) C MamGypLTR2b LTR/Gypsy (0) 922 751 3820637 280 24.5 23.6 1.6 chr17 48862017 48862061 (32333149) C MamGypLTR2b LTR/Gypsy (172) 750 691 3820637 403 32.1 3.8 1.3 chr17 48863359 48863516 (32331694) C MamGyp-int LTR/Gypsy (2276) 2786 2625 3820640 473 36.6 5.1 5.7 chr17 48897714 48897951 (32297259) C MamGyp-int LTR/Gypsy (78) 4984 4757 3820721 473 36.6 5.1 5.7 chr17 48899036 48899282 (32295928) C MamGyp-int LTR/Gypsy (311) 4751 4497 3820721 270 37.2 5.8 0.0 chr17 48900597 48900717 (32294493) C MamGyp-int LTR/Gypsy (1647) 3415 3288 3820727 434 25.9 9.4 4.0 chr17 49463922 49464122 (31731088) C MamGypLTR1c LTR/Gypsy (2) 801 590 3821831 321 35.4 4.2 0.0 chr17 49575838 49576052 (31619158) + LTR81A LTR/Gypsy 661 884 (466) 3822045 397 26.4 1.6 2.4 chr17 49959656 49959779 (31235431) C MamGypLTR3 LTR/Gypsy (39) 800 678 3822729 443 31.3 6.6 1.1 chr17 49960037 49960217 (31234993) C MamGypLTR3 LTR/Gypsy (436) 403 213 3822729 514 27.3 8.7 4.3 chr17 50150673 50150902 (31044308) + LTR81B LTR/Gypsy 193 432 (961) 3822965 710 27.9 5.5 6.6 chr17 50347690 50347946 (30847264) + MamGypLTR1b LTR/Gypsy 515 768 (14) 3823252 263 28.3 2.6 8.3 chr17 51855208 51855417 (29339793) C LTR81A LTR/Gypsy (31) 1362 1165 3825296 396 30.0 9.8 7.2 chr17 52340979 52341173 (28854037) + MamGypLTR2b LTR/Gypsy 163 509 (559) 3825955 385 29.1 7.1 4.8 chr17 52415835 52416034 (28779176) C LTR81B LTR/Gypsy (141) 1252 1083 3826047 526 30.7 7.7 3.5 chr17 52607612 52607871 (28587339) C MamGypLTR3 LTR/Gypsy (27) 812 542 3826308 290 29.6 19.4 7.1 chr17 52652263 52652473 (28542737) C MamGypLTR1c LTR/Gypsy (82) 731 485 3826360 443 31.8 6.3 12.6 chr17 52652833 52653134 (28542076) C LTR81A LTR/Gypsy (282) 1068 786 3826361 274 31.1 5.6 0.6 chr17 52925681 52925858 (28269352) C MamGypLTR1c LTR/Gypsy (9) 794 608 3826698 326 31.1 8.1 9.8 chr17 53242496 53242791 (27952419) + MamGypLTR1d LTR/Gypsy 168 458 (355) 3827216 312 24.3 6.2 8.1 chr17 53291799 53291959 (27903251) C MamGypLTR2b LTR/Gypsy (20) 902 745 3827314 232 28.6 4.3 1.1 chr17 53293844 53293935 (27901275) C LTR81A LTR/Gypsy (740) 610 516 3827318 271 35.4 12.9 1.3 chr17 53416560 53416868 (27778342) C LTR81C LTR/Gypsy (248) 905 561 3827512 293 30.6 4.3 2.7 chr17 53417172 53417384 (27777826) C LTR81C LTR/Gypsy (957) 232 12 3827512 246 26.0 5.0 5.0 chr17 53473033 53473133 (27722077) + MamGypLTR1b LTR/Gypsy 627 727 (55) 3827607 535 33.7 12.4 6.4 chr17 53593791 53593915 (27601295) + MamGypLTR2c LTR/Gypsy 6 144 (924) 3827817 535 33.7 12.4 6.4 chr17 53594221 53594611 (27600599) + MamGypLTR2c LTR/Gypsy 145 553 (515) 3827817 257 23.5 2.4 1.2 chr17 53943558 53943639 (27251571) C MamGypLTR1d LTR/Gypsy (2) 811 729 3828407 256 27.9 6.6 7.8 chr17 54036599 54036765 (27158445) + MamGypLTR1d LTR/Gypsy 609 773 (40) 3828548 748 28.4 12.0 1.6 chr17 54089429 54089796 (27105414) + LTR81B LTR/Gypsy 978 1383 (10) 3828614 490 33.6 9.6 1.5 chr17 54743877 54744148 (26451062) C MamGypLTR3 LTR/Gypsy (55) 784 491 3829649 225 11.1 40.6 1.6 chr17 54799504 54799567 (26395643) + MamGypLTR1c LTR/Gypsy 702 790 (13) 3829770 479 30.3 5.1 5.1 chr17 54806784 54807075 (26388135) + LTR81B LTR/Gypsy 1099 1390 (3) 3829782 562 32.7 7.7 3.2 chr17 56303346 56303658 (24891552) C MamGyp-int LTR/Gypsy (4455) 607 281 3832447 498 30.4 14.0 2.2 chr17 56453160 56453516 (24741694) + MamGypLTR1b LTR/Gypsy 29 427 (355) 3832661 549 33.6 7.1 1.5 chr17 56453540 56453808 (24741402) + MamGypLTR1b LTR/Gypsy 499 782 (0) 3832661 239 28.4 4.2 1.7 chr17 56980236 56980353 (24214857) C MamGypLTR1b LTR/Gypsy (23) 761 641 3833753 582 31.5 11.4 3.5 chr17 56980457 56980982 (24214228) C MamGypLTR1b LTR/Gypsy (206) 576 1 3833753 773 29.0 3.5 7.9 chr17 57625233 57625428 (23569782) C LTR81A LTR/Gypsy (0) 1350 1167 3835204 773 29.0 3.5 7.9 chr17 57625741 57625908 (23569302) C LTR81A LTR/Gypsy (184) 1166 1000 3835204 391 26.8 5.8 2.9 chr17 58645527 58645699 (22549511) + MamGypLTR2b LTR/Gypsy 689 866 (56) 3837184 270 34.8 8.8 4.2 chr17 58665219 58665434 (22529776) C MamGypLTR2c LTR/Gypsy (696) 372 147 3837231 284 31.1 10.0 5.3 chr17 59145521 59145819 (22049391) C MamGypLTR1a LTR/Gypsy (1) 783 471 3838095 365 30.8 6.4 3.4 chr17 60247252 60247486 (20947724) + MamGypLTR1d LTR/Gypsy 562 803 (10) 3839975 453 21.4 11.1 5.8 chr17 60294113 60294355 (20900855) C MamGypLTR2b LTR/Gypsy (29) 893 511 3840082 319 31.6 6.6 4.9 chr17 61594352 61594534 (19600676) C MamGypLTR1a LTR/Gypsy (52) 732 547 3842338 594 30.3 13.2 5.8 chr17 61944095 61944496 (19250714) C MamGypLTR3 LTR/Gypsy (177) 662 227 3842960 594 30.3 13.2 5.8 chr17 61944807 61944866 (19250344) C MamGypLTR3 LTR/Gypsy (613) 226 166 3842960 675 29.2 15.5 5.5 chr17 61966963 61967364 (19227846) C MamGypLTR3 LTR/Gypsy (177) 662 227 3842996 675 29.2 15.5 5.5 chr17 61967676 61967762 (19227448) C MamGypLTR3 LTR/Gypsy (613) 226 124 3842996 454 31.2 8.3 3.0 chr17 61981746 61982009 (19213201) C MamGypLTR3 LTR/Gypsy (177) 662 385 3843018 668 29.7 6.1 5.0 chr17 62390975 62391350 (18803860) C MamGypLTR1b LTR/Gypsy (0) 782 403 3843708 291 30.9 10.0 2.8 chr17 63198700 63198879 (17996331) C MamGypLTR3 LTR/Gypsy (25) 814 622 3845220 298 30.0 8.2 0.0 chr17 63258445 63258554 (17936656) + MamGypLTR1d LTR/Gypsy 694 812 (1) 3845334 231 32.4 7.4 5.6 chr17 63770387 63770494 (17424716) + MamGypLTR2c LTR/Gypsy 228 337 (731) 3846220 269 29.5 4.9 3.7 chr17 64263674 64263835 (16931375) C MamGypLTR1b LTR/Gypsy (24) 758 595 3846952 264 21.7 18.1 0.0 chr17 64889999 64890081 (16305129) C MamGypLTR1b LTR/Gypsy (28) 754 657 3847922 432 25.3 4.3 3.7 chr17 64924595 64924758 (16270452) C MamGypLTR1d LTR/Gypsy (621) 192 28 3847991 508 30.4 11.0 7.8 chr17 65765127 65765259 (15429951) C MamGypLTR1b LTR/Gypsy (21) 761 634 3849640 508 30.4 11.0 7.8 chr17 65765672 65765936 (15429274) C MamGypLTR1b LTR/Gypsy (149) 633 350 3849640 546 30.9 8.5 6.2 chr17 66574655 66574852 (14620358) + MamGypLTR1b LTR/Gypsy 1 194 (588) 3851301 546 31.6 6.5 5.1 chr17 66575171 66575691 (14619519) + MamGypLTR1b LTR/Gypsy 195 772 (10) 3851301 308 22.6 2.3 3.5 chr17 66584188 66584274 (14610936) + LTR81B LTR/Gypsy 93 178 (1215) 3851319 286 33.5 5.0 1.6 chr17 66638529 66638710 (14556500) C MamGypLTR1d LTR/Gypsy (0) 813 626 3851424 614 30.3 9.3 1.9 chr17 66710323 66710356 (14484854) + LTR81C LTR/Gypsy 89 121 (1229) 3851534 614 30.3 9.3 1.9 chr17 66710662 66710936 (14484274) + LTR81C LTR/Gypsy 122 420 (930) 3851534 681 31.4 9.7 5.1 chr17 66711195 66711764 (14483446) + LTR81C LTR/Gypsy 544 1139 (14) 3851534 509 35.6 6.7 4.9 chr17 67104762 67105148 (14090062) + LTR81B LTR/Gypsy 589 982 (411) 3852060 253 26.0 0.0 4.0 chr17 67105231 67105306 (14089904) + LTR81B LTR/Gypsy 1128 1200 (193) 3852060 467 30.6 3.7 0.5 chr17 67639321 67639507 (13555703) C MamGypLTR1a LTR/Gypsy (230) 554 362 3852947 254 31.1 8.7 2.2 chr17 67652714 67652851 (13542359) C MamGypLTR1b LTR/Gypsy (0) 784 638 3852976 623 32.3 8.5 7.3 chr17 67652920 67653423 (13541787) C MamGypLTR1b LTR/Gypsy (272) 510 1 3852976 278 25.4 5.6 0.0 chr17 68039364 68039434 (13155776) + MamGypLTR1c LTR/Gypsy 1 75 (728) 3853542 326 27.3 6.7 4.7 chr17 68678061 68678210 (12517000) C LTR81A LTR/Gypsy (134) 1216 1064 3854451 273 34.8 5.3 2.2 chr17 69250422 69250647 (11944563) C MamGypLTR1b LTR/Gypsy (0) 782 550 3855273 268 21.1 4.2 1.4 chr17 70356437 70356508 (10838702) + MamGypLTR1d LTR/Gypsy 737 810 (3) 3856961 327 25.6 5.0 1.7 chr17 70673254 70673372 (10521838) + MamGypLTR2c LTR/Gypsy 430 552 (516) 3857480 496 32.7 8.5 1.1 chr17 70673461 70673741 (10521469) + MamGypLTR2c LTR/Gypsy 688 989 (79) 3857480 271 30.6 5.5 5.0 chr17 70979966 70980147 (10215063) + MamGypLTR2c LTR/Gypsy 212 394 (674) 3858005 622 24.4 9.0 2.0 chr17 72025229 72025444 (9169766) C MamGypLTR1b LTR/Gypsy (10) 774 542 3859905 406 27.1 4.7 2.6 chr17 72025613 72025805 (9169405) C MamGypLTR1b LTR/Gypsy (486) 298 102 3859905 559 26.5 19.1 2.2 chr17 72057003 72057233 (9137977) C LTR81B LTR/Gypsy (1120) 273 4 3859957 714 29.7 8.9 0.4 chr17 72081750 72082019 (9113191) + MamGypLTR3 LTR/Gypsy 537 829 (10) 3860005 333 30.1 11.1 2.8 chr17 74632441 74632621 (6562589) + MamGypLTR1d LTR/Gypsy 273 468 (345) 3864688 618 25.5 13.8 0.9 chr17 74633695 74633912 (6561298) + MamGypLTR1d LTR/Gypsy 513 758 (55) 3864688 258 26.7 5.5 4.5 chr17 74979688 74979797 (6215413) C LTR81C LTR/Gypsy (78) 1075 965 3865376 228 25.4 0.0 1.6 chr17 75255552 75255615 (5939595) C MamGypLTR1a LTR/Gypsy (615) 169 107 3865912 248 24.2 5.6 8.3 chr17 76626977 76627120 (4568090) + MamGypLTR2b LTR/Gypsy 780 919 (3) 3868264 321 32.3 12.3 5.0 chr17 77907165 77907441 (3287769) + MamGypLTR1b LTR/Gypsy 479 775 (7) 3870079 369 23.2 1.3 12.1 chr18 292531 292687 (77784561) + MamGypLTR1d LTR/Gypsy 5 144 (669) 3874948 543 25.8 11.0 8.6 chr18 293280 293534 (77783714) + MamGypLTR1d LTR/Gypsy 547 807 (6) 3874948 1010 28.6 18.3 3.7 chr18 304105 304559 (77772689) C MamGypLTR2c LTR/Gypsy (95) 973 431 3874967 1010 28.6 18.3 3.7 chr18 304959 305097 (77772151) C MamGypLTR2c LTR/Gypsy (638) 430 292 3874967 297 31.6 9.9 1.3 chr18 634900 635050 (77442198) C MamGypLTR1a LTR/Gypsy (609) 175 12 3875501 579 31.2 9.2 9.0 chr18 876800 877206 (77200042) + MamGypLTR2b LTR/Gypsy 194 599 (323) 3876003 579 29.9 8.2 5.8 chr18 877527 877830 (77199418) + MamGypLTR2b LTR/Gypsy 600 1053 (15) 3876003 413 31.5 2.7 7.3 chr18 1010936 1011195 (77066053) + MamGypLTR1a LTR/Gypsy 332 579 (205) 3876200 245 23.7 11.3 0.0 chr18 1011193 1011289 (77065959) + MamGypLTR1a LTR/Gypsy 686 793 (10) 3876200 281 23.7 7.1 9.8 chr18 1270968 1271242 (76806006) C LTR81A LTR/Gypsy (38) 1312 867 3876496 234 18.2 3.6 0.0 chr18 1378191 1378245 (76699003) C MamGypLTR1d LTR/Gypsy (7) 806 750 3876625 369 32.1 4.2 1.8 chr18 1910595 1910762 (76166486) + MamGypLTR1a LTR/Gypsy 133 304 (480) 3877325 253 21.1 0.0 1.7 chr18 1994904 1994961 (76082287) + LTR81AB LTR/Gypsy 19 75 (203) 3877440 271 24.7 9.9 0.0 chr18 2648571 2648651 (75428597) + MamGypLTR1d LTR/Gypsy 205 293 (510) 3878376 293 35.2 2.4 3.2 chr18 2648690 2648815 (75428433) + MamGypLTR1d LTR/Gypsy 416 540 (273) 3878376 742 30.4 8.0 3.8 chr18 3016626 3016998 (75060250) + MamGypLTR1b LTR/Gypsy 7 395 (387) 3878936 258 21.8 10.9 9.5 chr18 3410997 3411133 (74666115) C LTR81B LTR/Gypsy (0) 1393 1255 3879649 251 22.6 10.9 9.5 chr18 3412466 3412602 (74664646) + LTR81B LTR/Gypsy 1255 1393 (0) 3879650 265 29.9 3.0 2.0 chr18 3907967 3908065 (74169183) + MamGypLTR2c LTR/Gypsy 969 1068 (0) 3880521 288 25.0 2.5 0.0 chr18 3933347 3933426 (74143822) C MamGypLTR2c LTR/Gypsy (31) 1037 956 3880553 286 27.4 4.0 9.2 chr18 4095848 4096020 (73981228) + MamGypLTR2b LTR/Gypsy 671 834 (88) 3880800 235 29.7 0.0 1.3 chr18 5205411 5205485 (72871763) + LTR81A LTR/Gypsy 150 223 (1127) 3882150 275 30.6 3.1 0.9 chr18 5205925 5206032 (72871216) C MamGypLTR2c LTR/Gypsy (639) 514 409 3882152 533 33.1 10.1 0.5 chr18 6158668 6158928 (71918320) + LTR81 LTR/Gypsy 471 856 (537) 3883368 246 28.9 4.1 0.0 chr18 6446051 6446147 (71631101) C MamGypLTR1d LTR/Gypsy (612) 201 101 3883735 243 18.2 7.5 1.5 chr18 6715189 6715255 (71361993) C MamGypLTR2c LTR/Gypsy (18) 1050 980 3884125 412 23.1 10.1 8.3 chr18 6780933 6781149 (71296099) C MamGypLTR2b LTR/Gypsy (10) 1058 696 3884217 257 34.6 6.0 5.0 chr18 6945341 6945713 (71131535) + LTR81A LTR/Gypsy 224 804 (589) 3884441 434 27.2 6.2 1.0 chr18 7212799 7212991 (70864257) C MamGypLTR2b LTR/Gypsy (43) 879 677 3884865 292 30.5 9.8 7.5 chr18 7450274 7450401 (70626847) + MamGypLTR2c LTR/Gypsy 59 195 (873) 3885237 292 30.5 9.8 7.5 chr18 7450710 7450842 (70626406) + MamGypLTR2c LTR/Gypsy 196 330 (738) 3885237 744 22.7 13.7 1.4 chr18 7451498 7451716 (70625532) + MamGypLTR2c LTR/Gypsy 820 1065 (3) 3885237 295 22.9 22.7 0.2 chr18 7452140 7452262 (70624986) C MamGypLTR2b LTR/Gypsy (51) 871 738 3885241 353 27.0 19.3 1.8 chr18 7454290 7454455 (70622793) C MamGypLTR2b LTR/Gypsy (20) 902 708 3885241 544 22.7 7.2 4.6 chr18 7529517 7529710 (70547538) + MamGypLTR2b LTR/Gypsy 722 920 (2) 3885359 262 27.5 2.4 3.6 chr18 7533648 7533730 (70543518) C MamGypLTR1a LTR/Gypsy (205) 579 498 3885365 433 32.6 6.5 2.5 chr18 7557160 7557188 (70520060) C LTR81 LTR/Gypsy (930) 259 231 3885396 433 32.6 6.5 2.5 chr18 7557490 7557660 (70519588) C LTR81 LTR/Gypsy (959) 230 51 3885396 646 28.1 7.5 4.2 chr18 8416090 8416490 (69660758) C MamGypLTR1a LTR/Gypsy (16) 768 355 3886403 497 25.3 12.3 0.7 chr18 8874409 8874563 (69202685) C MamGypLTR2b LTR/Gypsy (3) 919 747 3887111 369 23.8 6.2 4.7 chr18 8897509 8897636 (69179612) + LTR81AB LTR/Gypsy 123 252 (26) 3887136 247 24.8 7.9 6.7 chr18 9005748 9005911 (69071337) + MamGypLTR1b LTR/Gypsy 319 484 (298) 3887315 274 21.2 5.3 5.7 chr18 9405105 9405233 (68672015) + MamGypLTR1a LTR/Gypsy 637 765 (19) 3887997 558 30.3 7.6 2.0 chr18 9883233 9883612 (68193636) C LTR81A LTR/Gypsy (331) 1019 427 3888810 348 27.1 14.8 3.0 chr18 9973265 9973500 (68103748) C LTR81B LTR/Gypsy (32) 1361 1098 3888948 575 33.5 15.2 3.9 chr18 10002429 10002749 (68074499) + LTR81B LTR/Gypsy 377 722 (671) 3888975 575 33.3 14.8 3.0 chr18 10003229 10003757 (68073491) + LTR81B LTR/Gypsy 723 1308 (42) 3888975 339 23.7 4.7 8.5 chr18 10268113 10268241 (67809007) C MamGypLTR1b LTR/Gypsy (36) 746 623 3889322 361 32.2 5.6 3.7 chr18 10289572 10289787 (67787461) + MamGypLTR1c LTR/Gypsy 581 800 (3) 3889347 462 27.2 2.2 1.4 chr18 10337302 10337439 (67739809) + MamGypLTR2b LTR/Gypsy 784 922 (0) 3889410 262 8.1 10.1 10.1 chr18 10676477 10676545 (67400703) + MamGypLTR1c LTR/Gypsy 2 70 (733) 3889799 254 33.0 5.8 1.0 chr18 10676672 10676775 (67400473) + MamGypLTR2b LTR/Gypsy 14 122 (800) 3889800 474 29.1 5.1 1.7 chr18 10677527 10677701 (67399547) + MamGypLTR1c LTR/Gypsy 623 803 (0) 3889802 573 29.2 10.1 1.2 chr18 11653271 11653606 (66423642) C LTR81C LTR/Gypsy (16) 1137 772 3891088 253 26.5 15.8 6.2 chr18 11673735 11673911 (66403337) C MamGypLTR1c LTR/Gypsy (277) 526 333 3891108 632 20.0 6.7 4.2 chr18 11973483 11973675 (66103573) + MamGypLTR2b LTR/Gypsy 723 920 (2) 3891649 292 28.4 3.5 8.7 chr18 12155669 12155894 (65921354) C MamGypLTR1c LTR/Gypsy (558) 245 31 3891913 292 28.4 3.5 8.7 chr18 12156316 12156342 (65920906) C MamGypLTR1c LTR/Gypsy (773) 30 5 3891913 275 18.3 0.0 4.8 chr18 12488308 12488370 (65588878) + MamGypLTR1b LTR/Gypsy 151 210 (572) 3892459 336 24.8 10.3 5.5 chr18 12982964 12983108 (65094140) C MamGypLTR3 LTR/Gypsy (14) 825 674 3893439 329 28.5 1.8 5.2 chr18 13214154 13214314 (64862934) + MamGypLTR1c LTR/Gypsy 29 182 (600) 3893741 325 31.6 6.1 2.3 chr18 13869651 13869864 (64207384) C MamGypLTR2b LTR/Gypsy (30) 892 671 3894531 754 31.5 9.0 3.7 chr18 13895538 13896085 (64181163) + MamGypLTR3 LTR/Gypsy 153 839 (0) 3894568 327 23.1 15.9 7.5 chr18 13933829 13934029 (64143219) C MamGypLTR3 LTR/Gypsy (143) 696 479 3894606 288 32.8 3.9 6.3 chr18 14189787 14189991 (63887257) C MamGypLTR3 LTR/Gypsy (95) 744 545 3894911 265 22.9 3.3 8.9 chr18 14347584 14347743 (63729505) C LTR81A LTR/Gypsy (43) 1307 1218 3895156 1068 34.5 9.7 4.2 chr18 14359042 14359114 (63718134) + LTR81C LTR/Gypsy 1 76 (1077) 3895175 1068 34.5 9.7 4.2 chr18 14359478 14360294 (63716954) + LTR81C LTR/Gypsy 77 940 (213) 3895175 399 30.1 5.0 5.9 chr18 14457552 14457773 (63619475) + LTR81A LTR/Gypsy 797 1016 (334) 3895292 455 31.5 3.9 7.4 chr18 14532461 14532717 (63544531) + MamGypLTR3 LTR/Gypsy 497 744 (95) 3895384 231 30.5 4.4 6.6 chr18 15321620 15321756 (62755492) + MamGypLTR3 LTR/Gypsy 497 630 (209) 3896453 262 31.9 0.7 4.8 chr18 19878054 19878198 (58199050) C MamGypLTR3 LTR/Gypsy (0) 839 701 3899137 272 27.1 6.8 4.8 chr18 20629723 20629869 (57447379) C MamGypLTR2c LTR/Gypsy (0) 1068 919 3900280 227 8.9 6.7 0.0 chr18 20632061 20632105 (57445143) C MamGypLTR1d LTR/Gypsy (764) 49 2 3900286 649 33.7 4.1 2.1 chr18 20810606 20810944 (57266304) C MamGypLTR1a LTR/Gypsy (24) 760 415 3900628 245 26.7 13.0 5.1 chr18 20933981 20934118 (57143130) + MamGypLTR3 LTR/Gypsy 501 649 (190) 3900808 301 31.0 15.2 7.2 chr18 21200371 21200915 (56876333) + LTR81C LTR/Gypsy 87 675 (478) 3901300 281 21.5 18.7 2.9 chr18 21201010 21201240 (56876008) + LTR81C LTR/Gypsy 774 1130 (23) 3901300 303 13.2 14.3 1.3 chr18 21724832 21724908 (56352340) + LTR81C LTR/Gypsy 1067 1153 (0) 3902149 246 27.4 15.9 6.0 chr18 21953878 21954110 (56123138) + LTR81B LTR/Gypsy 1 256 (1094) 3902535 551 25.9 3.4 5.0 chr18 21954201 21954379 (56122869) + LTR81B LTR/Gypsy 289 464 (929) 3902535 1142 31.5 5.2 1.6 chr18 22114242 22114683 (55962565) C MamGypLTR1a LTR/Gypsy (39) 745 288 3902836 283 26.6 10.8 10.2 chr18 22115128 22115303 (55961945) C MamGypLTR1a LTR/Gypsy (605) 179 3 3902836 242 25.5 9.4 3.8 chr18 22280183 22280288 (55796960) + MamGypLTR1b LTR/Gypsy 635 746 (36) 3903074 394 31.7 8.8 3.8 chr18 22626213 22626294 (55450954) + LTR81B LTR/Gypsy 1104 1194 (199) 3903549 394 31.7 8.8 3.8 chr18 22626596 22626751 (55450497) + LTR81B LTR/Gypsy 1195 1354 (39) 3903549 371 26.6 2.1 14.1 chr18 22966204 22966444 (55110804) + MamGypLTR1c LTR/Gypsy 1 212 (591) 3903920 232 22.1 1.4 2.9 chr18 22966966 22967035 (55110213) + MamGypLTR2b LTR/Gypsy 807 875 (47) 3903921 331 22.2 22.4 3.6 chr18 23017339 23017530 (55059718) C LTR81B LTR/Gypsy (117) 1276 1049 3903989 295 26.4 11.3 5.4 chr18 23018130 23018333 (55058915) C LTR81B LTR/Gypsy (1099) 251 36 3903989 268 24.0 8.8 8.0 chr18 23141981 23142093 (54935155) C LTR81C LTR/Gypsy (927) 226 113 3904163 540 33.3 10.7 0.4 chr18 23421968 23422211 (54655037) + MamGypLTR1c LTR/Gypsy 528 796 (7) 3904515 292 29.2 10.6 7.7 chr18 23503138 23503515 (54573733) C MamGypLTR1d LTR/Gypsy (409) 404 16 3904648 228 34.6 13.2 4.4 chr18 25062973 25063199 (53014049) C MamGypLTR1b LTR/Gypsy (114) 668 422 3907015 299 31.8 13.8 3.1 chr18 25264549 25264772 (52812476) + MamGypLTR1c LTR/Gypsy 486 733 (70) 3907277 243 23.1 0.0 0.0 chr18 25325456 25325507 (52751741) C MamGypLTR1b LTR/Gypsy (93) 689 638 3907360 351 30.8 9.0 2.5 chr18 25780081 25780280 (52296968) + LTR81A LTR/Gypsy 11 223 (1127) 3907966 276 36.6 7.1 1.0 chr18 25780695 25780890 (52296358) + MamGypLTR2c LTR/Gypsy 231 438 (630) 3907968 489 26.5 4.5 9.8 chr18 25781358 25781621 (52295627) + MamGypLTR2c LTR/Gypsy 813 1062 (6) 3907970 318 24.8 6.7 2.5 chr18 25916927 25917046 (52160202) + MamGypLTR1d LTR/Gypsy 689 813 (0) 3908135 243 21.9 0.0 3.0 chr18 26379326 26379391 (51697857) + LTR81 LTR/Gypsy 1099 1162 (27) 3908745 228 23.5 0.0 8.1 chr18 26887848 26887921 (51189327) C LTR81B LTR/Gypsy (29) 1364 1297 3909452 242 31.8 5.9 0.0 chr18 27300272 27300356 (50776892) + LTR81C LTR/Gypsy 838 927 (226) 3909994 331 32.5 3.5 4.4 chr18 27405801 27406023 (50671225) C MamGypLTR1a LTR/Gypsy (13) 790 574 3910121 653 39.2 7.2 4.0 chr18 28631666 28632193 (49445055) C MamGyp-int LTR/Gypsy (921) 4141 3597 3911750 440 34.1 6.2 3.6 chr18 29144735 29145041 (48932207) + LTR81C LTR/Gypsy 484 798 (355) 3912465 253 24.7 9.2 7.8 chr18 29145127 29145306 (48931942) + LTR81A LTR/Gypsy 1142 1325 (25) 3912466 253 24.7 9.2 7.8 chr18 29145893 29145917 (48931331) + LTR81A LTR/Gypsy 1326 1350 (0) 3912466 258 30.7 0.0 2.6 chr18 29184239 29184355 (48892893) + MamGypLTR2c LTR/Gypsy 889 1002 (66) 3912524 739 32.9 16.0 2.9 chr18 29299102 29299477 (48777771) + LTR81A LTR/Gypsy 219 638 (712) 3912710 739 33.3 16.0 2.6 chr18 29300210 29300567 (48776681) + LTR81A LTR/Gypsy 441 968 (382) 3912710 266 29.7 3.2 4.1 chr18 29664894 29665016 (48412232) C LTR81A LTR/Gypsy (47) 1303 1182 3913405 288 26.3 24.1 3.5 chr18 29668322 29668451 (48408797) + LTR81A LTR/Gypsy 159 306 (1044) 3913417 288 26.3 24.1 3.5 chr18 29668763 29668863 (48408385) + LTR81A LTR/Gypsy 307 437 (913) 3913417 246 17.3 7.7 0.0 chr18 29669378 29669429 (48407819) + LTR81B LTR/Gypsy 1199 1254 (139) 3913419 482 33.2 6.9 0.5 chr18 30404453 30404655 (47672593) C MamGyp-int LTR/Gypsy (2462) 2600 2385 3914493 637 31.6 11.7 2.0 chr18 30405065 30405364 (47671884) C MamGyp-int LTR/Gypsy (3090) 1972 1644 3914493 283 24.7 3.3 1.1 chr18 30405494 30405583 (47671665) C MamGyp-int LTR/Gypsy (3412) 1650 1559 3914493 426 37.1 4.6 3.2 chr18 30406195 30406475 (47670773) C MamGyp-int LTR/Gypsy (4448) 614 330 3914493 263 32.2 5.6 0.0 chr18 31011937 31012026 (47065222) + MamGypLTR1a LTR/Gypsy 344 438 (346) 3915293 226 25.0 11.9 0.9 chr18 31036762 31036870 (47040378) + MamGypLTR2b LTR/Gypsy 795 915 (7) 3915326 263 26.1 2.4 6.3 chr18 31087361 31087487 (46989761) + MamGypLTR1b LTR/Gypsy 661 782 (0) 3915401 248 19.7 1.4 5.7 chr18 31345710 31345779 (46731469) C LTR81 LTR/Gypsy (113) 1280 1214 3915686 425 31.9 5.6 1.2 chr18 31355934 31356095 (46721153) C LTR81 LTR/Gypsy (225) 964 796 3915686 275 35.1 3.9 5.1 chr18 31356406 31356639 (46720609) C LTR81 LTR/Gypsy (856) 297 67 3915686 417 29.1 10.3 5.2 chr18 31659348 31659521 (46417727) C MamGypLTR2c LTR/Gypsy (544) 524 342 3916073 368 26.9 10.6 3.1 chr18 31659618 31659778 (46417470) C MamGypLTR2c LTR/Gypsy (870) 198 26 3916073 440 32.3 5.7 1.0 chr18 31785137 31785330 (46291918) + MamGypLTR2c LTR/Gypsy 61 263 (805) 3916219 390 27.6 22.6 5.2 chr18 31963556 31963593 (46113655) C MamGypLTR2c LTR/Gypsy (4) 1064 1025 3916441 390 27.6 22.6 5.2 chr18 31964549 31964837 (46112411) C MamGypLTR2c LTR/Gypsy (44) 1024 680 3916441 259 36.4 1.4 2.8 chr18 31965357 31965500 (46111748) C MamGypLTR2c LTR/Gypsy (923) 145 4 3916443 312 28.2 11.0 9.7 chr18 32055258 32055547 (46021701) C MamGypLTR2b LTR/Gypsy (30) 892 599 3916562 649 28.1 3.6 4.6 chr18 32617662 32617967 (45459281) C LTR81C LTR/Gypsy (97) 1056 754 3917330 398 31.0 5.3 5.3 chr18 32618529 32618773 (45458475) C LTR81C LTR/Gypsy (907) 246 2 3917330 353 29.6 12.9 4.1 chr18 32944277 32944639 (45132609) C LTR81C LTR/Gypsy (2) 1151 757 3917749 458 29.1 11.9 5.8 chr18 32978742 32978967 (45098281) + MamGypLTR2c LTR/Gypsy 19 258 (810) 3917798 319 32.3 5.3 4.1 chr18 33095924 33096094 (44981154) C MamGypLTR1c LTR/Gypsy (569) 234 62 3917957 343 29.1 7.5 4.3 chr18 35157780 35158028 (42919220) C LTR81C LTR/Gypsy (184) 969 756 3920695 290 31.9 3.4 1.7 chr18 35196481 35196598 (42880650) C MamGypLTR3 LTR/Gypsy (14) 825 706 3920750 269 25.3 14.2 6.5 chr18 35788359 35788527 (42288721) C MamGypLTR1d LTR/Gypsy (618) 195 14 3921510 297 31.6 12.3 1.1 chr18 35908258 35908436 (42168812) + MamGypLTR2b LTR/Gypsy 671 869 (53) 3921668 586 25.3 4.9 3.8 chr18 35939855 35940151 (42137097) C LTR81AB LTR/Gypsy (1091) 302 4 3921706 296 22.9 6.0 4.0 chr18 35967981 35968080 (42109168) C LTR81 LTR/Gypsy (218) 971 870 3921744 463 31.1 5.7 1.6 chr18 36028408 36028670 (42048578) + MamGypLTR1d LTR/Gypsy 536 922 (0) 3921813 352 25.0 8.1 2.7 chr18 36469071 36469218 (41608030) + MamGypLTR2c LTR/Gypsy 913 1068 (0) 3922379 230 23.1 3.1 0.0 chr18 37340590 37340654 (40736594) + MamGypLTR1b LTR/Gypsy 679 745 (37) 3923513 490 25.9 7.2 7.6 chr18 37352911 37353161 (40724087) + MamGypLTR1c LTR/Gypsy 511 760 (43) 3923526 252 29.0 1.8 5.3 chr18 38212550 38212662 (39864586) + MamGypLTR2c LTR/Gypsy 807 915 (153) 3924615 258 27.8 0.0 1.4 chr18 38212824 38212896 (39864352) + MamGypLTR2c LTR/Gypsy 907 978 (90) 3924615 813 33.5 6.0 6.4 chr18 38432870 38433547 (39643701) + MamGypLTR1d LTR/Gypsy 129 916 (6) 3924915 225 35.5 1.1 2.2 chr18 38439444 38439535 (39637713) + MamGypLTR3 LTR/Gypsy 14 104 (735) 3924927 438 33.6 11.7 3.2 chr18 38439758 38440040 (39637208) + MamGypLTR3 LTR/Gypsy 460 766 (73) 3924927 436 34.6 7.6 4.5 chr18 38655156 38655379 (39421869) C MamGypLTR3 LTR/Gypsy (199) 640 410 3925213 275 35.6 12.7 1.5 chr18 38743158 38743362 (39333886) C MamGypLTR3 LTR/Gypsy (0) 839 612 3925319 344 24.6 6.9 3.8 chr18 38939461 38939591 (39137657) + MamGypLTR1b LTR/Gypsy 635 769 (13) 3925614 363 32.9 11.1 2.6 chr18 39275176 39275409 (38801839) C MamGypLTR3 LTR/Gypsy (2) 837 584 3926062 371 34.3 12.4 4.9 chr18 39746537 39747232 (38330016) C MamGypLTR1a LTR/Gypsy (33) 751 4 3926760 465 27.9 6.2 4.2 chr18 40108759 40109016 (37968232) C MamGypLTR1c LTR/Gypsy (0) 803 513 3927255 233 29.8 1.8 0.0 chr18 40186473 40186529 (37890719) + LTR81 LTR/Gypsy 712 769 (420) 3927347 402 34.6 8.0 1.9 chr18 40259984 40260295 (37816953) + MamGyp-int LTR/Gypsy 2600 2930 (2132) 3927440 446 34.2 7.2 2.7 chr18 40260786 40261007 (37816241) + MamGyp-int LTR/Gypsy 3408 3639 (1423) 3927440 790 32.7 7.1 4.6 chr18 40314530 40315146 (37762102) + LTR81B LTR/Gypsy 501 1361 (32) 3927520 493 30.6 11.7 4.8 chr18 40440953 40441261 (37635987) C LTR81B LTR/Gypsy (10) 1383 1054 3927700 334 29.8 8.7 5.6 chr18 40441787 40442017 (37635231) C LTR81B LTR/Gypsy (1126) 267 30 3927700 249 22.8 0.0 1.7 chr18 41044066 41044123 (37033125) C LTR81C LTR/Gypsy (0) 1153 1097 3928515 333 28.7 9.1 1.8 chr18 41160272 41160381 (36916867) + MamGypLTR1b LTR/Gypsy 351 468 (314) 3928663 326 25.3 15.8 4.0 chr18 41160453 41160604 (36916644) + MamGypLTR1b LTR/Gypsy 612 781 (3) 3928663 356 26.0 9.9 7.4 chr18 41469284 41469445 (36607803) + LTR81A LTR/Gypsy 55 220 (58) 3929085 559 36.4 13.2 5.3 chr18 41469486 41470295 (36606953) + LTR81A LTR/Gypsy 229 1102 (248) 3929085 286 34.3 8.0 10.4 chr18 41480369 41480667 (36596581) + MamGypLTR1b LTR/Gypsy 384 675 (107) 3929098 243 36.4 7.8 1.7 chr18 41963298 41963476 (36113772) + LTR81B LTR/Gypsy 270 459 (934) 3929687 260 30.8 9.2 0.8 chr18 42091375 42091505 (35985743) C MamGypLTR2c LTR/Gypsy (33) 1035 894 3929828 230 25.8 4.7 4.7 chr18 42649782 42649887 (35427361) C MamGypLTR1c LTR/Gypsy (0) 813 708 3930599 255 27.7 11.9 5.4 chr18 42649982 42650149 (35427099) C MamGypLTR1c LTR/Gypsy (556) 247 69 3930599 301 32.3 8.8 8.0 chr18 42796264 42796640 (35280608) C LTR81A LTR/Gypsy (359) 991 499 3930815 391 30.2 7.3 0.5 chr18 42796872 42797149 (35280099) C LTR81A LTR/Gypsy (970) 380 68 3930815 503 23.3 7.5 0.8 chr18 43735940 43736073 (34341175) + MamGypLTR1c LTR/Gypsy 642 784 (19) 3932299 242 28.3 3.3 0.0 chr18 44110568 44110659 (33966589) + MamGypLTR1a LTR/Gypsy 651 745 (39) 3932949 531 27.6 8.8 5.6 chr18 44313010 44313258 (33763990) + MamGypLTR1b LTR/Gypsy 523 779 (3) 3933282 273 27.7 4.8 4.8 chr18 44371511 44371635 (33705613) C MamGypLTR1a LTR/Gypsy (57) 727 603 3933370 501 26.1 10.2 3.5 chr18 44932174 44932399 (33144849) C MamGypLTR2c LTR/Gypsy (33) 1035 795 3934223 438 29.3 18.8 2.2 chr18 44932450 44932864 (33144384) C MamGypLTR2c LTR/Gypsy (554) 514 31 3934223 507 29.3 21.5 6.0 chr18 45002339 45002756 (33074492) C MamGypLTR2c LTR/Gypsy (0) 1068 586 3934338 326 28.7 2.1 1.1 chr18 45273412 45273506 (32803742) + MamGypLTR1a LTR/Gypsy 41 136 (648) 3934767 451 21.9 4.9 4.9 chr18 45340711 45340873 (32736375) + LTR81C LTR/Gypsy 198 360 (990) 3934882 923 33.0 9.9 3.7 chr18 45340953 45341716 (32735532) + LTR81C LTR/Gypsy 311 1122 (31) 3934882 436 26.0 5.2 14.6 chr18 45477537 45477824 (32599424) + LTR81A LTR/Gypsy 1 261 (1132) 3935078 665 31.6 13.9 2.8 chr18 45478332 45478741 (32598507) + LTR81A LTR/Gypsy 385 810 (540) 3935078 226 37.0 0.0 1.0 chr18 45478746 45478846 (32598402) + LTR81C LTR/Gypsy 668 767 (422) 3935081 249 24.5 14.0 2.0 chr18 45478914 45479013 (32598235) + LTR81C LTR/Gypsy 964 1075 (78) 3935081 263 35.5 8.5 2.7 chr18 45524043 45524230 (32553018) + MamGypLTR3 LTR/Gypsy 545 743 (96) 3935171 408 31.2 14.3 5.6 chr18 47158299 47158772 (30918476) C MamGypLTR1a LTR/Gypsy (16) 768 254 3937802 261 27.0 1.0 13.6 chr18 47206068 47206143 (30871105) + LTR81C LTR/Gypsy 1018 1084 (69) 3937898 261 27.0 1.0 13.6 chr18 47206606 47206631 (30870617) + LTR81C LTR/Gypsy 1085 1107 (46) 3937898 1153 26.4 4.5 4.2 chr18 47548763 47549142 (30528106) + LTR81A LTR/Gypsy 7 387 (963) 3938348 230 19.2 0.0 8.8 chr18 47670821 47670877 (30406371) C MamGypLTR1d LTR/Gypsy (110) 703 652 3938513 376 24.9 3.6 4.5 chr18 47991315 47991484 (30085764) + MamGypLTR1d LTR/Gypsy 614 813 (0) 3938995 256 22.9 9.8 0.0 chr18 48161011 48161071 (29916177) C LTR81AB LTR/Gypsy (1081) 312 246 3939259 277 28.1 1.9 6.8 chr18 48161042 48161144 (29916104) C LTR81AB LTR/Gypsy (180) 98 1 3939259 374 30.6 15.9 3.1 chr18 48868731 48868956 (29208292) + MamGypLTR3 LTR/Gypsy 566 820 (19) 3940540 240 26.1 2.0 7.1 chr18 49311527 49311625 (28765623) + MamGypLTR2c LTR/Gypsy 21 114 (954) 3941207 288 33.3 7.8 2.8 chr18 49691074 49691215 (28386033) + MamGypLTR1c LTR/Gypsy 35 183 (620) 3941714 245 32.2 8.1 2.4 chr18 49691555 49691678 (28385570) + MamGypLTR1c LTR/Gypsy 454 584 (229) 3941714 367 28.2 18.3 5.1 chr18 49769466 49769760 (28307488) + MamGypLTR1c LTR/Gypsy 1 334 (469) 3941850 372 31.0 1.5 1.5 chr18 49787163 49787293 (28289955) C LTR81B LTR/Gypsy (0) 1393 1263 3941878 247 31.4 7.4 5.3 chr18 49984124 49984266 (28092982) C MamGypLTR3 LTR/Gypsy (10) 829 679 3942148 247 31.4 7.4 5.3 chr18 49984315 49984493 (28092755) C MamGypLTR3 LTR/Gypsy (161) 678 501 3942148 235 39.3 3.9 2.4 chr18 50030169 50030374 (28046874) C MamGypLTR2b LTR/Gypsy (536) 386 178 3942220 738 36.5 9.7 0.5 chr18 50556007 50556378 (27520870) C MamGypLTR1b LTR/Gypsy (20) 762 357 3942926 350 31.9 3.7 7.0 chr18 50556416 50556685 (27520563) C MamGypLTR1b LTR/Gypsy (521) 261 1 3942926 236 34.6 12.0 1.6 chr18 50772350 50772607 (27304641) C MamGypLTR2c LTR/Gypsy (573) 495 211 3943240 265 26.0 1.3 2.5 chr18 51338173 51338251 (26738997) C MamGypLTR2c LTR/Gypsy (970) 98 21 3943985 706 36.1 9.3 5.4 chr18 51983878 51984541 (26092707) + MamGypLTR1a LTR/Gypsy 95 784 (0) 3944906 310 30.1 2.2 1.5 chr18 52339858 52339992 (25737256) + MamGypLTR1b LTR/Gypsy 623 758 (24) 3945218 593 35.5 4.3 2.9 chr18 52672652 52672999 (25404249) + LTR81A LTR/Gypsy 663 1015 (335) 3945699 537 31.8 13.0 1.1 chr18 52690005 52690366 (25386882) C MamGypLTR1c LTR/Gypsy (79) 724 320 3945728 612 28.2 4.6 2.3 chr18 52812994 52813211 (25264037) C MamGypLTR2b LTR/Gypsy (2) 920 698 3945888 726 30.6 6.3 3.0 chr18 53272486 53272904 (24804344) + MamGypLTR3 LTR/Gypsy 354 839 (0) 3946450 485 27.2 9.5 3.4 chr18 53355053 53355231 (24722017) C LTR81C LTR/Gypsy (1) 1152 963 3946593 261 32.7 22.4 1.5 chr18 53355467 53355730 (24721518) C LTR81C LTR/Gypsy (491) 698 380 3946593 289 24.4 1.1 5.0 chr18 53441803 53441903 (24635345) C MamGypLTR2b LTR/Gypsy (44) 878 793 3946742 244 27.4 7.5 4.7 chr18 53499169 53499275 (24577973) C LTR81B LTR/Gypsy (30) 1363 1254 3946806 255 30.6 3.5 3.5 chr18 53805266 53805380 (24271868) C LTR81C LTR/Gypsy (979) 174 60 3947185 603 29.4 6.9 0.4 chr18 53876244 53876475 (24200773) C MamGyp-int LTR/Gypsy (2516) 2546 2300 3947291 849 35.1 3.7 1.4 chr18 53876486 53876840 (24200408) + MamGyp-int LTR/Gypsy 1830 2192 (2870) 3947292 541 29.6 9.4 2.8 chr18 54004493 54004746 (24072502) C MamGypLTR1a LTR/Gypsy (7) 777 507 3947478 456 32.9 3.3 5.8 chr18 54005364 54005605 (24071643) C MamGypLTR1a LTR/Gypsy (521) 263 28 3947478 369 28.4 6.4 2.7 chr18 54136544 54136821 (23940427) + MamGypLTR2b LTR/Gypsy 674 1062 (6) 3947653 283 21.9 10.9 5.0 chr18 54724745 54724845 (23352403) C MamGypLTR1c LTR/Gypsy (0) 803 697 3948483 886 27.5 1.2 1.6 chr18 54945210 54945460 (23131788) C MamGypLTR2b LTR/Gypsy (0) 922 673 3948786 354 28.3 8.7 4.8 chr18 55190695 55190924 (22886324) + MamGypLTR2c LTR/Gypsy 2 240 (828) 3949134 360 28.7 2.7 10.3 chr18 55649755 55650078 (22427170) + LTR81B LTR/Gypsy 12 311 (1039) 3949992 225 31.0 18.1 1.2 chr18 55650890 55651049 (22426199) + LTR81B LTR/Gypsy 1203 1389 (4) 3949992 327 29.2 4.3 5.3 chr18 56216810 56216997 (21860251) C LTR81B LTR/Gypsy (7) 1386 1201 3950791 237 19.1 12.4 1.1 chr18 56217334 56217411 (21859837) C LTR81B LTR/Gypsy (1095) 255 172 3950792 476 35.0 7.3 4.2 chr18 56789704 56790008 (21287240) + MamGypLTR2b LTR/Gypsy 526 846 (76) 3951817 476 35.0 7.3 4.2 chr18 56790321 56790399 (21286849) + MamGypLTR2b LTR/Gypsy 847 922 (0) 3951817 380 24.1 7.3 8.8 chr18 57812841 57813045 (20264203) C LTR81A LTR/Gypsy (14) 1336 1135 3953397 319 31.5 2.4 2.5 chr18 57814079 57814272 (20262976) C LTR81A LTR/Gypsy (1107) 286 97 3953399 230 33.6 14.2 1.3 chr18 57862403 57862634 (20214614) C MamGypLTR1a LTR/Gypsy (150) 634 373 3953470 235 17.8 16.2 1.4 chr18 58321724 58321797 (19755451) C MamGypLTR2c LTR/Gypsy (494) 574 490 3954065 743 24.9 6.7 6.1 chr18 58424994 58425294 (19651954) C LTR81B LTR/Gypsy (972) 421 123 3954217 280 37.1 3.9 2.2 chr18 58670594 58670775 (19406473) + LTR81C LTR/Gypsy 318 502 (651) 3954569 434 31.7 7.4 6.8 chr18 58824712 58825022 (19252226) C LTR81C LTR/Gypsy (83) 1070 758 3954797 341 28.6 8.5 8.2 chr18 58826621 58826868 (19250380) C LTR81C LTR/Gypsy (867) 322 57 3954797 341 26.6 6.0 9.5 chr18 58827145 58827179 (19250069) C LTR81C LTR/Gypsy (1132) 57 22 3954797 854 30.7 8.5 2.6 chr18 58923068 58923445 (19153803) C MamGypLTR1a LTR/Gypsy (369) 415 16 3954939 568 31.2 4.6 6.6 chr18 59063458 59063759 (19013489) C MamGyp-int LTR/Gypsy (4615) 447 152 3955124 442 31.6 11.2 3.4 chr18 59063908 59064202 (19013046) C MamGypLTR1c LTR/Gypsy (0) 803 486 3955125 232 28.2 6.5 7.7 chr18 59299966 59300134 (18777114) C LTR81B LTR/Gypsy (919) 431 265 3955470 241 25.1 6.1 15.7 chr18 59300173 59300370 (18776878) C LTR81B LTR/Gypsy (1206) 187 9 3955470 254 33.0 11.9 5.5 chr18 60060529 60060730 (18016518) + MamGypLTR3 LTR/Gypsy 620 834 (5) 3956600 336 33.2 9.5 4.4 chr18 60076162 60076457 (18000791) C MamGypLTR1b LTR/Gypsy (8) 774 464 3956628 274 28.1 5.1 3.4 chr18 60733489 60733606 (17343642) + MamGypLTR1b LTR/Gypsy 361 480 (302) 3957673 307 27.0 20.4 0.0 chr18 61110008 61110144 (16967104) C MamGypLTR2b LTR/Gypsy (28) 894 730 3958237 308 31.2 15.4 2.3 chr18 61771948 61772167 (16305081) C MamGypLTR1c LTR/Gypsy (288) 515 267 3959173 297 28.4 9.5 6.0 chr18 61772269 61772384 (16304864) C MamGypLTR1c LTR/Gypsy (586) 227 108 3959173 250 31.2 11.9 9.4 chr18 61815324 61815567 (16261681) C LTR81C LTR/Gypsy (770) 383 134 3959229 608 34.9 4.5 4.2 chr18 62047066 62047424 (16029824) + MamGypLTR3 LTR/Gypsy 480 839 (0) 3959540 282 31.9 0.0 0.0 chr18 62223344 62223412 (15853836) + MamGypLTR2c LTR/Gypsy 376 444 (624) 3959766 240 35.6 4.8 2.9 chr18 62224051 62224258 (15852990) + MamGypLTR2c LTR/Gypsy 827 1038 (30) 3959766 243 26.7 5.5 6.2 chr18 63945276 63945403 (14131845) + LTR81B LTR/Gypsy 182 308 (1085) 3962145 225 32.7 15.4 1.9 chr18 64494413 64494568 (13582680) + MamGypLTR2c LTR/Gypsy 312 488 (580) 3962907 253 35.5 0.0 1.8 chr18 65159626 65159734 (12917514) + MamGypLTR3 LTR/Gypsy 546 652 (187) 3963806 245 27.2 4.7 3.1 chr18 65864018 65864146 (12213102) + MamGypLTR2b LTR/Gypsy 782 912 (10) 3964781 391 40.1 5.4 4.2 chr18 65883147 65883575 (12193673) C LTR81A LTR/Gypsy (403) 990 557 3964809 226 23.1 1.9 0.0 chr18 66147024 66147075 (11930173) C LTR81A LTR/Gypsy (1185) 165 113 3965159 244 32.3 6.5 4.2 chr18 66438064 66438231 (11639017) + MamGypLTR2c LTR/Gypsy 6 177 (891) 3965652 451 26.7 2.5 1.7 chr18 66438393 66438510 (11638738) + MamGypLTR2c LTR/Gypsy 428 546 (522) 3965652 458 25.6 3.2 7.0 chr18 66438922 66439106 (11638142) + MamGypLTR2c LTR/Gypsy 877 1054 (14) 3965652 365 32.9 7.7 2.4 chr18 66960951 66961196 (11116052) + MamGypLTR1a LTR/Gypsy 7 265 (519) 3966386 357 29.8 28.0 1.6 chr18 67395228 67395473 (10681775) C LTR81 LTR/Gypsy (405) 784 474 3967011 239 31.4 12.0 3.2 chr18 67395697 67395821 (10681427) C LTR81 LTR/Gypsy (1149) 201 66 3967011 265 27.6 0.0 3.3 chr18 67945244 67945333 (10131915) + MamGypLTR1a LTR/Gypsy 645 731 (53) 3967749 262 32.1 4.3 3.5 chr18 68176051 68176166 (9901082) C MamGyp-int LTR/Gypsy (1609) 3453 3337 3968150 297 27.5 10.5 11.9 chr18 68215269 68215545 (9861703) + MamGypLTR3 LTR/Gypsy 485 757 (82) 3968200 264 33.2 6.4 4.6 chr18 69271093 69271310 (8805938) + MamGypLTR3 LTR/Gypsy 583 804 (35) 3969588 452 34.9 5.4 3.5 chr18 69545511 69545881 (8531367) C LTR81C LTR/Gypsy (214) 939 562 3969955 228 24.0 6.9 6.9 chr18 69820910 69821039 (8256209) C MamGypLTR2b LTR/Gypsy (97) 825 696 3970334 237 12.5 6.2 0.0 chr18 69840520 69840567 (8236681) C LTR81 LTR/Gypsy (246) 943 893 3970359 323 27.9 7.8 9.5 chr18 69840947 69841188 (8236060) C LTR81AB LTR/Gypsy (5) 273 36 3970360 231 36.3 6.6 3.3 chr18 70124918 70125128 (7952120) C LTR81B LTR/Gypsy (137) 1256 1039 3970733 228 28.8 5.1 0.0 chr18 70125382 70125440 (7951808) C LTR81AB LTR/Gypsy (158) 120 59 3970734 551 25.4 3.8 7.3 chr18 70312632 70312949 (7764299) + LTR81AB LTR/Gypsy 1 309 (1041) 3970994 461 33.5 7.7 6.3 chr18 71195722 71196320 (6880928) + MamGypLTR2c LTR/Gypsy 450 1056 (12) 3972203 228 17.6 5.3 10.5 chr18 71709566 71709660 (6367588) + LTR81 LTR/Gypsy 933 1022 (167) 3972897 431 25.6 4.2 3.5 chr18 73133551 73133692 (4943556) + LTR81C LTR/Gypsy 293 435 (718) 3974478 240 34.5 13.7 4.8 chr18 73837957 73838710 (4238538) + MamGypLTR3 LTR/Gypsy 10 830 (9) 3975294 372 29.9 4.5 3.5 chr18 73941895 73942092 (4135156) + MamGypLTR1c LTR/Gypsy 3 202 (601) 3975400 305 32.6 4.0 12.2 chr18 74433654 74434048 (3643200) + LTR81B LTR/Gypsy 182 544 (849) 3975991 228 18.3 4.9 13.4 chr18 74537096 74537177 (3540071) C MamGypLTR3 LTR/Gypsy (717) 122 48 3976198 273 36.4 2.5 3.1 chr18 75121823 75121981 (2955267) C MamGyp-int LTR/Gypsy (442) 4620 4463 3976912 265 38.1 9.8 4.1 chr18 75122035 75122281 (2954967) C MamGyp-int LTR/Gypsy (733) 4329 4066 3976912 265 38.1 9.8 4.1 chr18 75122577 75122697 (2954551) C MamGyp-int LTR/Gypsy (997) 4065 3940 3976912 1119 34.2 5.6 3.6 chr18 75368551 75369245 (2708003) C MamGyp-int LTR/Gypsy (2440) 2622 1914 3977225 355 26.9 8.8 3.9 chr18 75389122 75389326 (2687922) + MamGypLTR1c LTR/Gypsy 41 255 (548) 3977256 266 31.1 4.3 2.9 chr20 557725 557858 (62467662) + MamGypLTR2c LTR/Gypsy 57 192 (876) 3980834 398 34.2 4.8 1.8 chr20 953418 953633 (62071887) + MamGypLTR1d LTR/Gypsy 556 806 (7) 3981724 346 24.0 21.8 5.2 chr20 1040946 1041156 (61984364) + MamGypLTR3 LTR/Gypsy 544 789 (50) 3981934 704 25.8 4.3 8.3 chr20 1076722 1077021 (61948499) C LTR81A LTR/Gypsy (1062) 288 1 3982014 236 27.0 9.7 4.3 chr20 1180265 1180357 (61845163) C MamGypLTR1c LTR/Gypsy (0) 803 706 3982201 433 26.4 10.0 0.0 chr20 1222104 1222213 (61803307) C MamGypLTR1a LTR/Gypsy (7) 777 657 3982273 466 25.7 0.7 8.1 chr20 1222525 1222672 (61802848) C MamGypLTR1a LTR/Gypsy (647) 137 1 3982273 400 22.9 5.7 6.4 chr20 1472690 1472829 (61552691) C LTR81C LTR/Gypsy (31) 1122 984 3982675 602 30.9 6.9 7.3 chr20 1472997 1473432 (61552088) C LTR81C LTR/Gypsy (185) 968 535 3982675 331 28.6 10.0 3.1 chr20 1474124 1474253 (61551267) C MamGypLTR2c LTR/Gypsy (620) 448 310 3982678 291 30.9 7.7 2.6 chr20 1474259 1474414 (61551106) C LTR81C LTR/Gypsy (845) 505 342 3982675 234 34.1 6.3 7.4 chr20 1488824 1489092 (61536428) C MamGypLTR1b LTR/Gypsy (38) 744 479 3982698 413 29.9 9.0 4.5 chr20 1866240 1866306 (61159214) C MamGypLTR1c LTR/Gypsy (1) 802 735 3983342 413 29.9 9.0 4.5 chr20 1866444 1866620 (61158900) C MamGypLTR1c LTR/Gypsy (69) 734 547 3983342 242 32.0 0.0 1.9 chr20 1893748 1893852 (61131668) + MamGypLTR3 LTR/Gypsy 723 825 (14) 3983400 248 25.4 1.6 9.8 chr20 2035349 2035470 (60990050) C LTR81 LTR/Gypsy (46) 1304 1193 3983695 330 24.2 21.3 1.6 chr20 2036294 2036415 (60989105) C LTR81 LTR/Gypsy (246) 943 798 3983695 1491 28.0 13.2 1.0 chr20 2352361 2352952 (60672568) C LTR81C LTR/Gypsy (25) 1128 465 3984312 366 21.2 7.9 2.0 chr20 2354515 2354615 (60670905) C LTR81C LTR/Gypsy (1063) 287 181 3984312 281 17.0 1.9 0.0 chr20 2368015 2368067 (60657453) C MamGypLTR3 LTR/Gypsy (241) 598 545 3984347 567 28.4 5.1 5.0 chr20 2514441 2514721 (60510799) + LTR81A LTR/Gypsy 5 281 (1112) 3984607 329 16.0 8.0 0.0 chr20 2748145 2748219 (60277301) C MamGypLTR1b LTR/Gypsy (697) 85 5 3985010 269 29.4 4.5 2.7 chr20 3411678 3411785 (59613735) C LTR81B LTR/Gypsy (95) 1298 1189 3986248 468 25.5 11.0 4.0 chr20 3413116 3413315 (59612205) C LTR81B LTR/Gypsy (1076) 317 104 3986248 393 33.1 2.8 2.1 chr20 3441633 3441777 (59583743) C MamGypLTR3 LTR/Gypsy (59) 780 635 3986326 249 21.5 11.1 2.5 chr20 3997330 3997410 (59028110) C MamGypLTR1a LTR/Gypsy (34) 750 663 3987306 316 25.0 6.1 3.0 chr20 4290792 4290890 (58734630) C MamGypLTR3 LTR/Gypsy (140) 699 598 3987865 452 33.0 11.5 3.2 chr20 4301679 4301991 (58723529) + MamGypLTR3 LTR/Gypsy 500 838 (1) 3987884 292 25.8 4.7 2.4 chr20 4535628 4535754 (58489766) C MamGypLTR3 LTR/Gypsy (2) 837 708 3988230 398 26.9 18.4 2.5 chr20 4535768 4536011 (58489509) C MamGypLTR3 LTR/Gypsy (427) 412 130 3988230 228 32.1 13.3 1.3 chr20 4549447 4549604 (58475916) C MamGypLTR3 LTR/Gypsy (7) 832 656 3988251 372 21.9 2.4 8.1 chr20 4806236 4806294 (58219226) + LTR81AB LTR/Gypsy 4 63 (215) 3988684 372 21.9 2.4 8.1 chr20 4806591 4806654 (58218866) + LTR81AB LTR/Gypsy 64 120 (158) 3988684 489 23.6 1.6 0.8 chr20 4807657 4807784 (58217736) + LTR81AB LTR/Gypsy 131 259 (19) 3988684 605 26.6 18.1 2.9 chr20 4809520 4809894 (58215626) + LTR81B LTR/Gypsy 907 1338 (55) 3988693 242 24.6 7.6 1.5 chr20 4989864 4989929 (58035591) C LTR81B LTR/Gypsy (241) 1152 1083 3989029 451 23.6 6.4 5.5 chr20 5245820 5245913 (57779607) C MamGypLTR2b LTR/Gypsy (0) 922 835 3989559 451 23.6 6.4 5.5 chr20 5246342 5246466 (57779054) C MamGypLTR2b LTR/Gypsy (88) 834 701 3989559 477 23.6 3.8 0.0 chr20 5256250 5256355 (57769165) C MamGypLTR2c LTR/Gypsy (27) 1041 932 3989579 1577 29.2 17.2 5.3 chr20 5274524 5275500 (57750020) C LTR81B LTR/Gypsy (21) 1372 280 3989596 268 35.8 13.5 0.4 chr20 5425349 5425578 (57599942) C MamGypLTR1b LTR/Gypsy (177) 605 346 3989822 251 30.6 5.9 5.3 chr20 5645952 5646103 (57379417) C MamGypLTR1b LTR/Gypsy (47) 735 583 3990249 315 21.3 3.1 3.1 chr20 5712995 5713091 (57312429) C MamGypLTR1b LTR/Gypsy (367) 415 319 3990413 306 35.7 6.8 3.6 chr20 6110575 6110795 (56914725) C MamGypLTR1b LTR/Gypsy (93) 689 462 3991163 610 31.8 14.2 6.0 chr20 6150693 6150959 (56874561) C MamGypLTR1b LTR/Gypsy (0) 782 477 3991228 610 31.8 14.2 6.0 chr20 6151271 6151383 (56874137) C MamGypLTR1b LTR/Gypsy (306) 476 371 3991228 230 26.4 5.1 9.4 chr20 7015401 7015517 (56010003) C LTR81A LTR/Gypsy (1126) 224 113 3992483 260 23.6 3.2 5.3 chr20 7045624 7045717 (55979803) C LTR81A LTR/Gypsy (6) 1344 1253 3992528 226 21.7 0.0 9.8 chr20 7184909 7184959 (55840561) C MamGypLTR2b LTR/Gypsy (763) 159 114 3992696 251 34.1 8.2 3.4 chr20 7220443 7220736 (55804784) + MamGypLTR2c LTR/Gypsy 52 359 (709) 3992753 242 32.3 8.4 3.6 chr20 7247601 7247767 (55777753) + MamGypLTR1a LTR/Gypsy 14 188 (594) 3992795 367 32.6 5.5 2.2 chr20 7248699 7248880 (55776640) + MamGypLTR1a LTR/Gypsy 597 784 (0) 3992795 237 30.8 0.0 5.2 chr20 7682502 7682597 (55342923) C LTR81B LTR/Gypsy (4) 1389 1299 3993387 424 22.9 3.2 7.1 chr20 7683387 7683541 (55341979) C LTR81C LTR/Gypsy (876) 277 129 3993390 254 33.9 11.0 3.7 chr20 7700297 7700596 (55324924) C MamGypLTR1b LTR/Gypsy (0) 782 461 3993416 238 28.0 3.1 7.8 chr20 8792655 8792908 (54232612) + LTR81A LTR/Gypsy 193 478 (915) 3995007 336 33.2 9.1 9.3 chr20 8792953 8793437 (54232083) + LTR81A LTR/Gypsy 684 1167 (183) 3995007 260 34.5 6.0 2.0 chr20 8875065 8875215 (54150305) + MamGypLTR1c LTR/Gypsy 97 253 (550) 3995144 364 35.5 1.1 8.2 chr20 8875460 8875643 (54149877) + MamGypLTR1c LTR/Gypsy 469 639 (164) 3995144 397 28.1 5.0 10.1 chr20 8905846 8906063 (54119457) + MamGypLTR3 LTR/Gypsy 516 722 (117) 3995199 275 33.8 10.0 1.7 chr20 8914558 8914798 (54110722) + MamGypLTR1d LTR/Gypsy 545 805 (8) 3995217 277 29.9 5.0 12.4 chr20 9461852 9462110 (53563410) C LTR81C LTR/Gypsy (132) 1021 782 3996085 277 26.4 11.2 11.7 chr20 9462224 9462429 (53563091) C MamGypLTR2c LTR/Gypsy (568) 500 296 3996086 261 20.5 6.6 0.2 chr20 9529440 9529525 (53495995) + LTR81B LTR/Gypsy 1 89 (1304) 3996193 968 30.4 13.4 8.6 chr20 9529634 9529974 (53495546) + LTR81B LTR/Gypsy 266 644 (749) 3996193 968 30.4 13.4 8.6 chr20 9530239 9530249 (53495271) + LTR81B LTR/Gypsy 645 653 (740) 3996193 968 30.4 13.4 8.6 chr20 9530703 9531378 (53494142) + LTR81B LTR/Gypsy 654 1344 (49) 3996193 968 30.4 13.4 8.6 chr20 9531409 9531453 (53494067) + LTR81B LTR/Gypsy 1345 1393 (0) 3996193 252 36.6 1.5 0.8 chr20 10096051 10096182 (52929338) C MamGypLTR1b LTR/Gypsy (68) 714 582 3997116 234 21.8 0.0 3.5 chr20 10160839 10160893 (52864627) C LTR81A LTR/Gypsy (171) 1179 1127 3997221 311 29.7 11.3 3.8 chr20 10162607 10162844 (52862676) C LTR81A LTR/Gypsy (898) 452 197 3997224 379 32.1 6.0 4.7 chr20 11440997 11441228 (51584292) C MamGypLTR1c LTR/Gypsy (200) 603 369 3999113 409 29.0 1.4 2.1 chr20 11544857 11544997 (51480523) + MamGypLTR2c LTR/Gypsy 2 141 (927) 3999244 338 22.3 11.5 1.0 chr20 11545571 11545674 (51479846) C MamGypLTR2c LTR/Gypsy (55) 1013 899 3999246 419 20.6 12.5 3.7 chr20 11559723 11559858 (51465662) C MamGypLTR1b LTR/Gypsy (2) 780 633 3999268 247 35.1 3.5 0.0 chr20 11560325 11560438 (51465082) C MamGypLTR1b LTR/Gypsy (582) 200 83 3999269 518 31.7 16.6 2.9 chr20 11590342 11590751 (51434769) + LTR81C LTR/Gypsy 530 995 (158) 3999309 384 23.0 7.6 3.5 chr20 11650558 11650728 (51374792) C LTR81A LTR/Gypsy (1163) 187 10 3999386 333 31.0 4.4 0.6 chr20 11810723 11810881 (51214639) + MamGypLTR1c LTR/Gypsy 636 800 (3) 3999622 284 28.4 0.0 0.0 chr20 12016699 12016772 (51008748) C MamGypLTR2c LTR/Gypsy (133) 935 862 3999965 531 29.3 6.8 0.0 chr20 12294327 12294531 (50730989) + MamGypLTR1a LTR/Gypsy 11 229 (555) 4000350 312 21.4 2.2 2.2 chr20 12778310 12778400 (50247120) + MamGypLTR2b LTR/Gypsy 832 922 (0) 4000963 382 24.6 15.8 4.9 chr20 12853371 12853554 (50171966) C MamGypLTR1c LTR/Gypsy (596) 207 4 4001060 233 25.3 4.3 2.1 chr20 12899068 12899160 (50126360) C LTR81B LTR/Gypsy (18) 1375 1281 4001130 326 32.9 1.8 3.0 chr20 12900747 12900912 (50124608) C LTR81A LTR/Gypsy (1079) 271 108 4001134 402 25.2 3.7 1.8 chr20 12947224 12947332 (50078188) C LTR81B LTR/Gypsy (3) 1390 1280 4001192 638 30.8 9.3 11.9 chr20 12948280 12948969 (50076551) C LTR81B LTR/Gypsy (716) 677 6 4001192 259 36.1 1.5 8.1 chr20 12980826 12981084 (50044436) + MamGypLTR1c LTR/Gypsy 254 495 (308) 4001245 395 32.7 9.8 1.5 chr20 13064297 13064622 (49960898) C MamGypLTR1a LTR/Gypsy (23) 761 409 4001362 292 29.9 4.9 7.0 chr20 13064740 13064953 (49960567) C MamGypLTR1a LTR/Gypsy (562) 222 7 4001362 320 33.7 7.4 0.6 chr20 13900082 13900257 (49125263) + MamGypLTR1b LTR/Gypsy 380 567 (215) 4002640 452 24.1 0.7 2.2 chr20 13960207 13960342 (49065178) C MamGypLTR2b LTR/Gypsy (16) 906 773 4002746 506 35.8 3.7 2.0 chr20 14584748 14584992 (48440528) C MamGypLTR3 LTR/Gypsy (46) 793 545 4003634 236 27.5 0.0 2.4 chr20 15016105 15016186 (48009334) C MamGypLTR1b LTR/Gypsy (25) 757 678 4004255 246 37.5 7.2 1.6 chr20 15023543 15023791 (48001729) C MamGypLTR1c LTR/Gypsy (81) 722 460 4004264 235 18.4 0.0 2.0 chr20 15120719 15120768 (47904752) C MamGypLTR2b LTR/Gypsy (18) 904 856 4004401 385 30.9 3.9 1.3 chr20 15882429 15882582 (47142938) C MamGypLTR1c LTR/Gypsy (201) 602 445 4005524 244 28.3 7.4 1.9 chr20 16876316 16876423 (46149097) C MamGypLTR1d LTR/Gypsy (6) 807 694 4006960 563 30.6 10.5 4.5 chr20 17692543 17693006 (45332514) C LTR81B LTR/Gypsy (183) 1210 483 4008192 423 28.9 14.3 1.1 chr20 17693276 17693464 (45332056) C LTR81B LTR/Gypsy (926) 227 14 4008192 229 26.2 16.2 0.0 chr20 18056464 18056543 (44968977) C MamGypLTR1a LTR/Gypsy (24) 758 666 4008934 565 25.6 18.6 3.5 chr20 18056548 18056891 (44968629) C MamGypLTR1a LTR/Gypsy (388) 396 1 4008934 261 25.6 4.7 3.5 chr20 18730471 18730555 (44294965) + LTR81 LTR/Gypsy 1065 1150 (39) 4010021 746 17.6 8.0 6.4 chr20 18889607 18889794 (44135726) C LTR81B LTR/Gypsy (1101) 292 102 4010241 258 24.6 3.2 4.8 chr20 19009362 19009485 (44016035) + MamGypLTR2b LTR/Gypsy 773 894 (28) 4010414 345 27.4 7.5 6.6 chr20 19024039 19024265 (44001255) C MamGypLTR1d LTR/Gypsy (14) 799 561 4010431 256 22.0 16.4 0.9 chr20 19118930 19119039 (43906481) + LTR81C LTR/Gypsy 97 223 (930) 4010566 277 33.3 1.9 3.9 chr20 19696861 19696963 (43328557) C LTR81B LTR/Gypsy (1015) 378 278 4011341 311 30.2 3.8 3.0 chr20 19715284 19715416 (43310104) + LTR81B LTR/Gypsy 262 395 (998) 4011361 375 27.5 4.0 9.3 chr20 20190176 20190359 (42835161) C MamGypLTR2b LTR/Gypsy (32) 1036 761 4012121 355 25.3 5.6 8.8 chr20 21653798 21653957 (41371563) + LTR81A LTR/Gypsy 93 247 (1103) 4014208 280 32.6 5.0 1.0 chr20 21654278 21654376 (41371144) + LTR81A LTR/Gypsy 452 554 (635) 4014208 436 27.0 11.1 6.3 chr20 21655351 21655561 (41369959) + LTR81A LTR/Gypsy 1077 1297 (53) 4014208 436 27.0 11.1 6.3 chr20 21655862 21655902 (41369618) + LTR81A LTR/Gypsy 1298 1341 (9) 4014208 339 13.0 0.0 0.2 chr20 21795321 21795375 (41230145) + MamGypLTR1a LTR/Gypsy 736 812 (1) 4014375 297 27.1 10.4 6.6 chr20 21840948 21841129 (41184391) + MamGypLTR1c LTR/Gypsy 4 192 (611) 4014440 454 30.4 11.0 6.7 chr20 21841341 21841594 (41183926) + MamGypLTR1c LTR/Gypsy 495 759 (44) 4014440 292 19.3 5.3 0.0 chr20 21842689 21842745 (41182775) + MamGypLTR1c LTR/Gypsy 725 784 (0) 4014440 297 24.8 6.0 2.6 chr20 22091548 22091663 (40933857) C MamGypLTR2b LTR/Gypsy (29) 893 774 4014744 284 28.1 3.9 6.4 chr20 22137205 22137360 (40888160) C MamGypLTR1b LTR/Gypsy (5) 777 626 4014790 384 34.5 11.1 4.9 chr20 22221733 22222199 (40803321) C MamGypLTR1a LTR/Gypsy (4) 780 285 4014875 263 27.5 15.6 2.9 chr20 22583819 22584186 (40441334) + LTR81B LTR/Gypsy 131 554 (839) 4015359 428 35.1 4.8 3.9 chr20 22860898 22861229 (40164291) + MamGyp-int LTR/Gypsy 1398 1732 (3330) 4015675 505 30.7 4.2 8.4 chr20 22861850 22862112 (40163408) + MamGyp-int LTR/Gypsy 1850 2101 (2961) 4015675 347 29.4 1.1 0.0 chr20 22862337 22862428 (40163092) + MamGyp-int LTR/Gypsy 2378 2470 (2592) 4015675 407 33.0 6.7 1.7 chr20 22862513 22862752 (40162768) + MamGyp-int LTR/Gypsy 2601 2852 (2210) 4015675 333 34.1 7.0 0.0 chr20 22867931 22868059 (40157461) + MamGyp-int LTR/Gypsy 3059 3196 (1866) 4015675 357 39.3 6.0 2.4 chr20 22870299 22870632 (40154888) + MamGyp-int LTR/Gypsy 4165 4510 (552) 4015675 300 28.0 4.7 5.5 chr20 22990731 22990928 (40034592) + MamGypLTR1c LTR/Gypsy 41 239 (543) 4015827 278 26.7 1.0 2.9 chr20 22991151 22991254 (40034266) + MamGypLTR1c LTR/Gypsy 678 779 (3) 4015827 439 25.5 10.3 0.7 chr20 23216203 23216348 (39809172) + MamGypLTR3 LTR/Gypsy 525 684 (155) 4016093 239 30.5 4.8 4.1 chr20 24348473 24348619 (38676901) + LTR81AB LTR/Gypsy 131 278 (0) 4017473 251 21.0 4.1 15.7 chr20 24425820 24425966 (38599554) + MamGypLTR1b LTR/Gypsy 51 180 (602) 4017577 286 24.3 16.6 2.0 chr20 24795578 24795728 (38229792) + MamGypLTR1c LTR/Gypsy 58 230 (573) 4018003 364 33.2 8.4 3.3 chr20 25541093 25541307 (37484213) C MamGypLTR1b LTR/Gypsy (277) 505 280 4018973 233 35.1 10.7 0.0 chr20 29983821 29983951 (33041569) C MamGypLTR1b LTR/Gypsy (2) 780 636 4020649 524 23.7 4.7 10.6 chr20 30011067 30011340 (33014180) + LTR81A LTR/Gypsy 1069 1326 (24) 4020705 282 27.7 1.2 1.2 chr20 30029761 30029844 (32995676) C LTR81A LTR/Gypsy (23) 1130 1047 4020746 307 29.1 4.7 5.8 chr20 30029974 30030126 (32995394) C LTR81A LTR/Gypsy (138) 1212 1078 4020746 251 34.2 0.6 12.6 chr20 30031188 30031361 (32994159) C MamGypLTR2c LTR/Gypsy (613) 455 303 4020749 242 28.1 8.2 1.0 chr20 30052838 30052934 (32972586) C LTR81B LTR/Gypsy (1142) 251 148 4020812 433 27.4 2.6 4.0 chr20 30087940 30088091 (32937429) C MamGypLTR1a LTR/Gypsy (0) 784 635 4020900 343 26.4 10.2 2.2 chr20 30088162 30088407 (32937113) C MamGypLTR1a LTR/Gypsy (258) 524 236 4020900 343 26.7 1.6 4.1 chr20 30090072 30090192 (32935328) C MamGypLTR1a LTR/Gypsy (577) 205 88 4020900 284 30.1 7.8 0.0 chr20 31550019 31550121 (31475399) C LTR81 LTR/Gypsy (565) 624 514 4024279 262 31.7 19.4 0.8 chr20 31713503 31713626 (31311894) C MamGypLTR1b LTR/Gypsy (288) 494 348 4024628 234 16.9 13.1 3.3 chr20 31821515 31821575 (31203945) + MamGypLTR1c LTR/Gypsy 734 800 (3) 4024855 558 32.2 5.8 2.5 chr20 31898729 31899072 (31126448) C MamGypLTR1a LTR/Gypsy (45) 758 395 4025012 932 24.6 7.3 5.8 chr20 32535442 32535769 (30489751) C MamGypLTR3 LTR/Gypsy (28) 811 479 4026541 282 27.2 14.7 3.0 chr20 32571390 32571586 (30453934) + LTR81C LTR/Gypsy 875 1094 (59) 4026627 295 22.8 14.0 1.1 chr20 32778967 32779059 (30246461) C MamGypLTR1b LTR/Gypsy (31) 751 647 4027046 339 32.1 2.9 8.7 chr20 34553548 34553892 (28471628) C MamGypLTR2b LTR/Gypsy (22) 900 576 4030953 253 18.1 6.6 5.3 chr20 34731209 34731284 (28294236) C MamGyp-int LTR/Gypsy (2186) 2876 2800 4031389 469 32.5 10.1 3.2 chr20 36106416 36106723 (26918797) + MamGypLTR2c LTR/Gypsy 8 336 (732) 4034418 235 15.5 17.3 5.3 chr20 36121126 36121200 (26904320) + LTR81A LTR/Gypsy 69 152 (1198) 4034444 329 30.3 9.2 0.7 chr20 36121253 36121405 (26904115) + MamGypLTR2c LTR/Gypsy 36 201 (867) 4034445 377 23.3 2.2 1.1 chr20 36121421 36121511 (26904009) + MamGypLTR2c LTR/Gypsy 291 382 (686) 4034445 278 27.3 4.0 4.0 chr20 36121776 36121901 (26903619) + MamGypLTR2c LTR/Gypsy 811 936 (132) 4034445 279 28.0 6.4 2.7 chr20 36210258 36210367 (26815153) C MamGypLTR1c LTR/Gypsy (8) 795 682 4034605 676 32.5 3.7 2.3 chr20 36871422 36871720 (26153800) + MamGypLTR3 LTR/Gypsy 537 839 (0) 4035934 275 25.3 26.9 3.5 chr20 36965997 36966197 (26059323) C MamGypLTR3 LTR/Gypsy (33) 806 559 4036176 263 18.3 1.6 4.8 chr20 36966238 36966300 (26059220) C MamGypLTR3 LTR/Gypsy (234) 605 545 4036176 231 28.9 3.4 5.7 chr20 37045154 37045241 (25980279) C LTR81B LTR/Gypsy (890) 503 418 4036366 304 26.9 13.8 4.2 chr20 37045471 37045637 (25979883) C LTR81B LTR/Gypsy (1186) 207 25 4036366 368 32.2 7.2 1.0 chr20 37089024 37089230 (25936290) + MamGypLTR1a LTR/Gypsy 555 774 (10) 4036453 403 28.3 5.2 7.2 chr20 37269798 37270048 (25755472) C MamGypLTR3 LTR/Gypsy (447) 392 147 4036776 747 30.4 5.8 5.2 chr20 37306501 37306864 (25718656) + MamGypLTR1b LTR/Gypsy 406 771 (11) 4036864 298 24.6 3.9 7.1 chr20 37721721 37721847 (25303673) C MamGypLTR1a LTR/Gypsy (30) 754 632 4037674 330 33.5 6.0 3.7 chr20 37722117 37722333 (25303187) C MamGypLTR1a LTR/Gypsy (525) 259 38 4037675 437 34.4 6.0 0.9 chr20 37913702 37913918 (25111602) + LTR81A LTR/Gypsy 747 974 (376) 4038034 267 25.9 2.2 5.6 chr20 38061512 38061601 (24963919) + MamGypLTR3 LTR/Gypsy 659 745 (94) 4038306 262 19.4 11.9 0.0 chr20 38063703 38063769 (24961751) C LTR81AB LTR/Gypsy (159) 119 45 4038314 254 30.4 3.5 2.8 chr20 38126547 38126688 (24898832) + MamGypLTR1b LTR/Gypsy 631 773 (9) 4038410 227 17.9 2.6 0.0 chr20 38310608 38310646 (24714874) C LTR81B LTR/Gypsy (943) 450 411 4038718 491 28.8 5.6 8.0 chr20 38927338 38927586 (24097934) + MamGypLTR2c LTR/Gypsy 665 1053 (15) 4039647 303 22.5 13.2 6.0 chr20 39014931 39015081 (24010439) + LTR81A LTR/Gypsy 97 262 (1088) 4039790 597 28.7 14.1 5.7 chr20 39160845 39161177 (23864343) + MamGypLTR3 LTR/Gypsy 479 839 (0) 4040065 449 26.2 2.5 5.1 chr20 39621002 39621158 (23404362) C MamGypLTR2b LTR/Gypsy (0) 922 770 4040920 225 19.2 3.8 8.8 chr20 40587987 40588066 (22437454) C LTR81A LTR/Gypsy (869) 481 406 4042442 445 28.5 19.1 7.3 chr20 40674445 40674785 (22350735) C LTR81B LTR/Gypsy (42) 1351 971 4042593 642 29.1 9.9 4.3 chr20 41508439 41508812 (21516708) + MamGypLTR1a LTR/Gypsy 46 440 (344) 4043987 444 26.8 10.8 1.8 chr20 41508890 41509056 (21516464) + MamGypLTR1a LTR/Gypsy 597 778 (6) 4043987 816 30.8 10.9 7.2 chr20 41891495 41892240 (21133280) C MamGypLTR1b LTR/Gypsy (2) 780 8 4044710 238 27.1 7.2 9.6 chr20 42064852 42065018 (20960502) + LTR81AB LTR/Gypsy 1 163 (115) 4045067 451 33.3 9.1 0.5 chr20 42372437 42372656 (20652864) + MamGypLTR2c LTR/Gypsy 19 257 (811) 4045761 267 34.1 3.2 0.0 chr20 42372723 42372848 (20652672) + MamGypLTR2c LTR/Gypsy 421 550 (518) 4045761 362 29.9 6.3 5.4 chr20 42373123 42373240 (20652280) + MamGypLTR2c LTR/Gypsy 862 991 (77) 4045761 362 29.9 6.3 5.4 chr20 42373535 42373620 (20651900) + MamGypLTR2c LTR/Gypsy 992 1067 (1) 4045761 375 29.6 1.3 7.2 chr20 42400783 42400931 (20624589) + LTR81C LTR/Gypsy 12 151 (1002) 4045830 230 27.5 6.0 5.3 chr20 42849178 42849327 (20176193) C MamGypLTR2c LTR/Gypsy (117) 951 801 4046774 251 35.7 7.5 2.0 chr20 42849495 42849640 (20175880) C LTR81C LTR/Gypsy (488) 665 512 4046775 335 29.6 17.1 3.0 chr20 42849709 42850071 (20175449) C LTR81A LTR/Gypsy (765) 585 172 4046776 228 27.7 7.0 9.6 chr20 43388551 43388706 (19636814) + MamGypLTR1c LTR/Gypsy 38 189 (614) 4048076 299 33.8 6.5 5.6 chr20 43388748 43388979 (19636541) + MamGypLTR2b LTR/Gypsy 10 243 (679) 4048077 231 32.8 4.2 1.7 chr20 44134301 44134418 (18891102) + MamGypLTR2b LTR/Gypsy 269 389 (533) 4049522 505 24.8 0.7 1.5 chr20 45068929 45069063 (17956457) + MamGypLTR2b LTR/Gypsy 697 830 (92) 4051319 255 22.6 26.5 2.2 chr20 45106516 45106651 (17918869) C MamGypLTR2c LTR/Gypsy (35) 1033 865 4051382 318 36.0 8.9 1.4 chr20 45408032 45408400 (17617120) + MamGypLTR1a LTR/Gypsy 373 769 (15) 4052075 236 24.4 14.6 0.0 chr20 45411953 45412034 (17613486) C MamGypLTR1c LTR/Gypsy (222) 581 488 4052087 405 24.6 2.4 0.8 chr20 45468899 45469021 (17556499) + MamGypLTR1a LTR/Gypsy 437 561 (223) 4052221 251 22.4 1.5 1.5 chr20 45469943 45470010 (17555510) + MamGypLTR1a LTR/Gypsy 729 796 (7) 4052221 645 32.0 7.9 5.4 chr20 45687905 45687985 (17337535) C MamGypLTR1c LTR/Gypsy (0) 803 726 4052719 645 32.0 7.9 5.4 chr20 45688288 45688558 (17336962) C MamGypLTR1c LTR/Gypsy (78) 725 442 4052719 592 32.1 7.8 5.0 chr20 45719727 45720047 (17305473) C MamGypLTR1b LTR/Gypsy (22) 760 431 4052798 550 30.4 22.7 1.1 chr20 45735004 45735369 (17290151) C MamGypLTR1c LTR/Gypsy (1) 802 358 4052828 330 28.2 9.5 6.3 chr20 46516083 46516326 (16509194) + MamGypLTR1b LTR/Gypsy 493 754 (30) 4054611 277 26.3 5.8 3.9 chr20 46613186 46613288 (16412232) + MamGypLTR1a LTR/Gypsy 41 145 (639) 4054791 307 28.9 14.1 2.5 chr20 46767408 46767570 (16257950) + MamGypLTR1c LTR/Gypsy 622 803 (0) 4055080 314 30.6 0.0 2.0 chr20 47965317 47965416 (15060104) C MamGypLTR1a LTR/Gypsy (56) 728 631 4057644 329 20.0 13.3 0.0 chr20 47970160 47970249 (15055271) + MamGypLTR1c LTR/Gypsy 660 761 (42) 4057659 243 29.6 2.8 14.8 chr20 48162221 48162470 (14863050) + MamGypLTR3 LTR/Gypsy 489 708 (131) 4058154 255 31.5 8.7 0.0 chr20 48977789 48977915 (14047605) C MamGypLTR1c LTR/Gypsy (620) 183 46 4060122 504 23.3 9.1 5.4 chr20 49152002 49152187 (13873333) + LTR81B LTR/Gypsy 1 193 (1200) 4060560 364 28.3 8.2 4.1 chr20 49285918 49286112 (13739408) + LTR81B LTR/Gypsy 12 214 (1179) 4060805 313 18.3 4.8 2.4 chr20 49286902 49286985 (13738535) + LTR81B LTR/Gypsy 1085 1170 (223) 4060807 382 29.9 7.0 0.2 chr20 49286965 49287134 (13738386) + LTR81B LTR/Gypsy 1241 1381 (12) 4060807 259 34.0 3.9 1.0 chr20 49652065 49652168 (13373352) C LTR81A LTR/Gypsy (1206) 144 38 4061622 293 27.5 4.4 8.4 chr20 49662488 49662605 (13362915) C MamGypLTR1a LTR/Gypsy (93) 689 570 4061645 394 26.9 38.3 2.7 chr20 49711468 49711719 (13313801) C MamGypLTR1c LTR/Gypsy (2) 801 460 4061750 350 32.8 3.1 11.1 chr20 49720965 49721225 (13304295) C MamGypLTR1c LTR/Gypsy (0) 803 564 4061766 298 34.6 2.5 3.7 chr20 49721503 49721664 (13303856) C MamGypLTR1c LTR/Gypsy (611) 173 14 4061766 233 28.8 18.0 1.2 chr20 49867692 49867863 (13157657) C MamGypLTR2b LTR/Gypsy (56) 866 666 4062090 388 23.7 8.2 7.5 chr20 49943012 49943157 (13082363) + MamGypLTR3 LTR/Gypsy 635 781 (58) 4062247 266 16.0 6.0 0.0 chr20 50854776 50854825 (12170695) + LTR81C LTR/Gypsy 980 1032 (121) 4064370 240 22.6 11.5 3.1 chr20 50855045 50855140 (12170380) + LTR81C LTR/Gypsy 1083 1186 (3) 4064370 572 22.2 3.9 5.2 chr20 50855500 50855727 (12169793) + LTR81C LTR/Gypsy 911 1166 (23) 4064373 432 29.2 6.9 0.8 chr20 50898503 50898633 (12126887) C MamGypLTR1d LTR/Gypsy (3) 810 672 4064470 445 32.4 4.0 8.8 chr20 50899231 50899534 (12125986) C MamGypLTR1d LTR/Gypsy (243) 570 277 4064470 445 32.4 4.0 8.8 chr20 50899896 50899966 (12125554) C MamGypLTR1d LTR/Gypsy (537) 276 213 4064470 502 22.4 14.4 5.6 chr20 50919725 50919904 (12105616) + MamGypLTR2b LTR/Gypsy 718 913 (9) 4064521 377 32.5 1.9 3.8 chr20 51002260 51002416 (12023104) + MamGypLTR2b LTR/Gypsy 639 792 (130) 4064685 237 16.7 3.6 3.6 chr20 51044930 51044985 (11980535) C MamGypLTR2b LTR/Gypsy (45) 877 822 4064778 253 19.9 10.3 5.7 chr20 51082625 51082722 (11942798) + MamGypLTR1b LTR/Gypsy 2 104 (680) 4064859 255 30.2 13.1 7.1 chr20 51082778 51083044 (11942476) + MamGypLTR1b LTR/Gypsy 119 401 (381) 4064859 633 33.1 2.9 1.6 chr20 51083096 51083338 (11942182) + MamGypLTR1b LTR/Gypsy 528 773 (9) 4064859 336 34.0 2.7 4.0 chr20 51256207 51256430 (11769090) + LTR81A LTR/Gypsy 768 988 (362) 4065185 282 29.7 5.8 2.5 chr20 51377234 51377354 (11648166) C MamGypLTR3 LTR/Gypsy (19) 820 696 4065422 320 27.4 9.2 3.7 chr20 51414893 51415055 (11610465) C MamGypLTR2c LTR/Gypsy (0) 1068 897 4065493 342 35.0 6.1 10.6 chr20 51415963 51416470 (11609050) C MamGypLTR2c LTR/Gypsy (526) 542 58 4065493 247 26.7 10.1 3.7 chr20 51682428 51682536 (11342984) C MamGypLTR2b LTR/Gypsy (222) 700 585 4065993 738 30.0 15.3 3.8 chr20 51738982 51739584 (11285936) C MamGypLTR1c LTR/Gypsy (57) 746 75 4066088 421 28.7 5.9 1.3 chr20 51955636 51955787 (11069733) C MamGypLTR1c LTR/Gypsy (0) 803 645 4066503 253 30.3 11.5 4.0 chr20 51977976 51978123 (11047397) C MamGypLTR1c LTR/Gypsy (0) 803 645 4066552 430 26.3 8.6 2.1 chr20 51980920 51981059 (11044461) C MamGypLTR1c LTR/Gypsy (628) 175 27 4066561 411 24.0 4.9 6.1 chr20 51998042 51998205 (11027315) C MamGypLTR2b LTR/Gypsy (5) 917 756 4066596 352 30.8 15.2 1.1 chr20 52145849 52146032 (10879488) C MamGypLTR1d LTR/Gypsy (87) 726 517 4066898 254 20.8 7.9 5.0 chr20 52705105 52705205 (10320315) + MamGypLTR1a LTR/Gypsy 53 156 (628) 4068211 481 34.1 12.7 1.9 chr20 53294324 53294646 (9730874) C MamGypLTR1a LTR/Gypsy (3) 781 424 4069343 400 28.4 3.4 0.8 chr20 53320743 53320859 (9704661) C MamGypLTR1a LTR/Gypsy (0) 784 665 4069395 269 33.1 4.7 1.3 chr20 53483542 53483691 (9541829) + MamGypLTR1b LTR/Gypsy 624 778 (4) 4069647 240 19.1 0.0 0.0 chr20 54204820 54204861 (8820659) C MamGypLTR1d LTR/Gypsy (5) 808 767 4070751 246 24.3 3.5 1.4 chr20 54216073 54216158 (8809362) + MamGypLTR1b LTR/Gypsy 655 746 (38) 4070758 243 26.4 1.4 0.0 chr20 54295046 54295117 (8730403) C MamGypLTR1c LTR/Gypsy (3) 800 728 4070904 240 25.9 6.2 0.0 chr20 54297734 54297814 (8727706) C MamGypLTR1a LTR/Gypsy (697) 87 2 4070910 330 26.3 6.3 0.0 chr20 54563917 54564011 (8461509) + MamGypLTR1c LTR/Gypsy 46 146 (657) 4071358 323 32.2 8.1 7.4 chr20 54564029 54564286 (8461234) + MamGypLTR1c LTR/Gypsy 551 810 (3) 4071358 259 28.8 1.6 10.9 chr20 54673314 54673496 (8352024) + LTR81A LTR/Gypsy 1 166 (1184) 4071530 251 29.2 8.6 9.0 chr20 54674249 54674435 (8351085) + LTR81A LTR/Gypsy 779 956 (197) 4071530 251 29.2 8.6 9.0 chr20 54674739 54674783 (8350737) + LTR81A LTR/Gypsy 957 1010 (143) 4071530 697 27.2 12.1 4.3 chr20 54775635 54775914 (8249606) + MamGypLTR3 LTR/Gypsy 493 794 (45) 4071706 691 30.1 9.0 5.0 chr20 54779046 54779402 (8246118) C MamGypLTR1a LTR/Gypsy (13) 771 401 4071714 227 26.9 11.7 1.1 chr20 54788640 54788733 (8236787) C MamGypLTR1d LTR/Gypsy (0) 813 710 4071731 346 27.1 8.1 0.8 chr20 54821070 54821192 (8204328) + MamGypLTR1d LTR/Gypsy 632 763 (50) 4071789 260 33.3 11.0 1.4 chr20 54928118 54928336 (8097184) C MamGypLTR1a LTR/Gypsy (0) 782 543 4071984 482 28.5 2.7 4.3 chr20 54928643 54928829 (8096691) C MamGypLTR1a LTR/Gypsy (479) 305 122 4071984 250 38.9 7.6 0.0 chr20 55691408 55691538 (7333982) C MamGypLTR2b LTR/Gypsy (780) 142 2 4073681 297 27.2 19.3 2.0 chr20 55706012 55706161 (7319359) + MamGypLTR1c LTR/Gypsy 625 800 (3) 4073713 243 40.9 4.1 0.0 chr20 56009658 56009828 (7015692) + MamGypLTR3 LTR/Gypsy 662 839 (0) 4074266 297 26.9 5.8 1.6 chr20 56022381 56022501 (7003019) C MamGypLTR1c LTR/Gypsy (6) 797 672 4074299 343 31.2 5.8 2.4 chr20 56034965 56035171 (6990349) + MamGypLTR1b LTR/Gypsy 421 634 (148) 4074329 371 30.9 4.0 0.7 chr20 56103749 56103898 (6921622) + MamGypLTR3 LTR/Gypsy 683 837 (2) 4074444 318 26.5 3.0 1.0 chr20 56144989 56145087 (6880433) + MamGypLTR2b LTR/Gypsy 754 854 (68) 4074500 261 31.0 5.8 2.1 chr20 56751518 56751665 (6273855) C MamGypLTR1b LTR/Gypsy (86) 696 541 4075577 279 18.2 4.3 4.3 chr20 57753674 57753742 (5271778) C LTR81 LTR/Gypsy (20) 1169 1101 4077049 239 32.9 4.7 7.1 chr20 57754972 57755141 (5270379) C LTR81B LTR/Gypsy (1029) 364 199 4077052 310 25.0 9.2 0.9 chr20 57928677 57928785 (5096735) + MamGypLTR1a LTR/Gypsy 514 631 (153) 4077301 285 29.0 7.0 0.0 chr20 58134886 58134985 (4890535) + MamGypLTR1c LTR/Gypsy 694 800 (3) 4077612 411 29.9 2.0 2.0 chr20 58757533 58757679 (4267841) C MamGypLTR1b LTR/Gypsy (41) 741 595 4078549 262 30.2 2.8 0.0 chr20 58797218 58797323 (4228197) + MamGypLTR2b LTR/Gypsy 752 860 (62) 4078601 471 32.9 9.4 2.4 chr20 58922733 58923062 (4102458) C MamGypLTR1a LTR/Gypsy (0) 784 432 4078790 274 27.5 14.3 10.4 chr20 59044258 59044573 (3980947) C LTR81C LTR/Gypsy (0) 1189 840 4078963 352 23.3 9.4 4.7 chr20 59129027 59129193 (3896327) C MamGypLTR1b LTR/Gypsy (630) 173 1 4079071 228 32.1 12.7 0.6 chr20 59155234 59155390 (3870130) C LTR81A LTR/Gypsy (139) 1211 1036 4079101 362 28.9 15.4 5.4 chr20 59179044 59179303 (3846217) + MamGypLTR1a LTR/Gypsy 499 784 (0) 4079132 247 25.2 14.6 4.8 chr20 59350368 59350554 (3674966) C MamGypLTR1d LTR/Gypsy (11) 802 573 4079359 483 29.2 1.0 6.6 chr20 59453189 59453386 (3572134) + MamGypLTR2b LTR/Gypsy 708 894 (28) 4079505 332 34.1 6.1 1.5 chr20 59743097 59743358 (3282162) + MamGypLTR1b LTR/Gypsy 391 664 (118) 4079926 258 26.9 3.0 0.0 chr20 60492252 60492318 (2533202) C MamGypLTR2b LTR/Gypsy (692) 230 162 4080798 318 33.5 9.8 4.6 chr20 62776934 62777218 (248302) + MamGypLTR3 LTR/Gypsy 480 779 (60) 4083355 294 22.1 1.5 0.0 chrY 1575187 1575254 (57798312) + LTR81AB LTR/Gypsy 43 111 (167) 4086550 289 29.6 1.6 3.1 chrY 2153998 2154126 (57219440) C MamGypLTR1a LTR/Gypsy (3) 781 655 4087904 258 28.3 1.6 3.2 chrY 2154173 2154296 (57219270) C MamGypLTR1b LTR/Gypsy (10) 772 651 4087905 280 26.4 10.0 0.0 chrY 2154341 2154450 (57219116) C MamGypLTR1b LTR/Gypsy (10) 772 652 4087906 289 22.0 9.5 4.8 chrY 2462978 2463082 (56910484) + MamGypLTR1a LTR/Gypsy 620 729 (55) 4088559 287 39.2 2.3 5.9 chrY 2962119 2962461 (56411105) C LTR81 LTR/Gypsy (315) 838 518 4089372 234 29.5 2.6 2.6 chrY 3026859 3026973 (56346593) C MamGypLTR1d LTR/Gypsy (17) 796 682 4089457 266 30.2 10.7 1.6 chrY 4338836 4338956 (55034610) C MamGypLTR2c LTR/Gypsy (539) 529 398 4090893 812 32.7 11.6 4.2 chrY 5081293 5081742 (54291824) C MamGypLTR3 LTR/Gypsy (226) 613 131 4091691 1486 33.6 8.1 6.2 chrY 5723580 5724530 (53649036) C LTR81B LTR/Gypsy (33) 1360 392 4092392 288 26.4 9.8 1.6 chrY 5724581 5724703 (53648863) C LTR81B LTR/Gypsy (0) 278 146 4092392 235 35.9 0.8 2.2 chrY 13401199 13401332 (45972234) C MamGypLTR1c LTR/Gypsy (21) 761 630 4097613 566 37.5 5.7 8.4 chrY 13401761 13402394 (45971172) C MamGypLTR1c LTR/Gypsy (187) 626 10 4097613 287 29.0 4.7 0.0 chrY 16120529 16120635 (43252931) C LTR81A LTR/Gypsy (172) 1178 1067 4101079 287 29.0 4.7 0.0 chrY 16145855 16145961 (43227605) + LTR81A LTR/Gypsy 1067 1178 (172) 4101117 231 9.4 0.0 0.0 chrY 17762281 17762312 (41611254) C MamGypLTR2c LTR/Gypsy (175) 893 862 4103301 503 36.4 9.0 1.1 chrY 17881717 17882083 (41491483) C LTR81C LTR/Gypsy (136) 1017 622 4103442 343 21.6 3.3 2.2 chrY 18043257 18043346 (41330220) + LTR81B LTR/Gypsy 149 239 (1154) 4103681 248 32.4 7.4 2.1 chrY 19405315 19405503 (39968063) + MamGypLTR1a LTR/Gypsy 2 200 (584) 4105743 292 24.6 8.4 0.8 chrY 22523649 22523779 (36849787) + MamGypLTR2b LTR/Gypsy 767 907 (15) 4108947 633 23.7 2.9 6.6 chrY 23116526 23116769 (36256797) C LTR81B LTR/Gypsy (1151) 242 8 4109468 264 26.9 3.8 1.3 chrY 24383849 24383927 (34989639) C LTR81A LTR/Gypsy (212) 1138 1058 4110742 242 30.4 0.0 2.1 chrY 24865763 24865856 (34507710) + LTR81 LTR/Gypsy 1092 1183 (6) 4111271 234 30.4 8.0 2.0 chrY 24881074 24881224 (34492342) + LTR81A LTR/Gypsy 1191 1350 (0) 4111289 242 30.4 0.0 2.1 chrY 25622628 25622721 (33750845) C LTR81 LTR/Gypsy (6) 1183 1092 4112121 714 25.4 2.5 9.1 chrY 26336982 26337096 (33036470) + MamGypLTR3 LTR/Gypsy 555 655 (184) 4112910 714 25.4 2.5 9.1 chrY 26337233 26337358 (33036208) + MamGypLTR3 LTR/Gypsy 656 780 (59) 4112910 714 25.4 2.5 9.1 chrY 27625075 27625200 (31748366) C MamGypLTR3 LTR/Gypsy (59) 780 656 4114469 714 25.4 2.5 9.1 chrY 27625337 27625451 (31748115) C MamGypLTR3 LTR/Gypsy (184) 655 555 4114469 242 30.4 0.0 2.1 chrY 28340184 28340277 (31033289) + LTR81 LTR/Gypsy 1092 1183 (6) 4115263 249 35.2 5.7 5.7 chrY 28567081 28567291 (30806275) C MamGypLTR3 LTR/Gypsy (132) 707 497 4115631 276 21.4 0.0 13.4 chr19 5381348 5381388 (53747595) C MamGypLTR1d LTR/Gypsy (19) 794 759 4128011 276 21.4 0.0 13.4 chr19 5381716 5381769 (53747214) C MamGypLTR1d LTR/Gypsy (55) 758 711 4128011 357 30.5 6.2 5.1 chr19 5515770 5515945 (53613038) C MamGypLTR3 LTR/Gypsy (117) 722 545 4128380 341 31.0 9.5 5.5 chr19 6642409 6642681 (52486302) + MamGypLTR1d LTR/Gypsy 519 802 (11) 4130861 323 22.3 9.6 1.0 chr19 6890910 6891013 (52237970) C LTR81B LTR/Gypsy (15) 1378 1266 4131524 266 35.0 1.7 0.0 chr19 11769039 11769155 (47359828) + MamGypLTR3 LTR/Gypsy 270 388 (451) 4142673 238 32.9 1.8 6.0 chr19 13781990 13782050 (45346933) C MamGypLTR1c LTR/Gypsy (0) 803 746 4147063 238 32.9 1.8 6.0 chr19 13782361 13782466 (45346517) C MamGypLTR1c LTR/Gypsy (58) 745 643 4147063 321 28.5 7.1 2.8 chr19 14713891 14714031 (44414952) C MamGypLTR1c LTR/Gypsy (4) 799 653 4149448 258 30.9 3.3 3.8 chr19 14714880 14715074 (44413909) C MamGypLTR1c LTR/Gypsy (306) 497 291 4149448 313 30.1 9.3 3.5 chr19 15262655 15262826 (43866157) + MamGypLTR2b LTR/Gypsy 621 802 (120) 4150750 458 31.4 1.8 9.1 chr19 16742298 16742518 (42386465) + MamGypLTR3 LTR/Gypsy 410 614 (225) 4153695 412 29.1 3.8 6.3 chr19 17710704 17710861 (41418122) + MamGypLTR2b LTR/Gypsy 768 921 (1) 4156100 226 22.0 5.1 0.0 chr19 28386984 28387042 (30741941) C LTR81C LTR/Gypsy (873) 280 219 4167339 376 21.0 5.6 5.6 chr19 28506342 28506467 (30622516) + MamGypLTR2b LTR/Gypsy 774 899 (23) 4167481 250 28.1 0.1 2.1 chr19 28688803 28688897 (30440086) C MamGypLTR1b LTR/Gypsy (13) 790 675 4167726 243 29.6 3.5 7.6 chr19 28824794 28824965 (30304018) + MamGypLTR1d LTR/Gypsy 297 461 (352) 4167924 514 19.8 16.6 10.7 chr19 28871349 28871637 (30257346) C MamGypLTR2c LTR/Gypsy (11) 1057 752 4167996 512 32.8 10.8 5.0 chr19 29766439 29766798 (29362185) + MamGypLTR1a LTR/Gypsy 404 784 (0) 4169293 390 27.7 13.2 3.3 chr19 30345200 30345412 (28783571) + MamGypLTR2b LTR/Gypsy 689 922 (0) 4170278 226 24.5 0.0 0.0 chr19 31301026 31301074 (27827909) C MamGypLTR1a LTR/Gypsy (619) 165 117 4171586 289 33.3 9.7 2.6 chr19 31494459 31494800 (27634183) + MamGypLTR1a LTR/Gypsy 36 401 (383) 4171821 457 20.9 5.7 0.9 chr19 31966122 31966227 (27162756) C MamGypLTR1b LTR/Gypsy (11) 771 661 4172497 286 15.0 1.6 3.2 chr19 31968275 31968336 (27160647) C MamGypLTR1b LTR/Gypsy (578) 204 144 4172504 303 27.9 15.7 4.1 chr19 32018079 32018250 (27110733) + MamGypLTR1c LTR/Gypsy 2 193 (610) 4172581 357 22.7 9.0 0.9 chr19 32099082 32099192 (27029791) C MamGypLTR1d LTR/Gypsy (12) 801 682 4172699 237 34.9 8.1 0.0 chr19 32099264 32099349 (27029634) C MamGypLTR2b LTR/Gypsy (276) 646 554 4172700 300 27.9 9.6 1.4 chr19 32129462 32129586 (26999397) + MamGypLTR2c LTR/Gypsy 175 278 (790) 4172744 229 27.2 8.3 5.5 chr19 32677174 32677282 (26451701) + MamGypLTR1c LTR/Gypsy 661 772 (31) 4173553 281 24.6 4.0 4.8 chr19 32698389 32698512 (26430471) + LTR81B LTR/Gypsy 156 278 (911) 4173593 470 21.3 14.0 0.0 chr19 32699526 32699661 (26429322) + LTR81B LTR/Gypsy 1239 1393 (0) 4173593 280 30.0 19.9 2.5 chr19 33634761 33634996 (25493987) C MamGypLTR3 LTR/Gypsy (4) 835 559 4175417 405 17.7 4.1 1.0 chr19 34279602 34279698 (24849285) + LTR81A LTR/Gypsy 11 110 (1240) 4176382 316 33.1 6.8 4.9 chr19 34516050 34516419 (24612564) + LTR81AB LTR/Gypsy 1 380 (970) 4176786 297 27.3 4.8 4.0 chr19 34527432 34527557 (24601426) C MamGypLTR1d LTR/Gypsy (0) 922 694 4176809 249 24.3 3.2 14.4 chr19 35720056 35720180 (23408803) C MamGypLTR1c LTR/Gypsy (75) 728 618 4179005 273 31.2 3.2 7.7 chr19 36433116 36433271 (22695712) C MamGypLTR3 LTR/Gypsy (73) 766 618 4180485 266 33.3 8.6 2.7 chr19 40293639 40293860 (18835123) + MamGyp-int LTR/Gypsy 886 1120 (3942) 4188362 273 16.7 0.0 2.0 chr19 40434354 40434402 (18694581) + MamGypLTR1c LTR/Gypsy 149 196 (607) 4188666 912 27.6 3.4 4.8 chr19 40439991 40440283 (18688700) + MamGypLTR1d LTR/Gypsy 520 808 (5) 4188681 245 28.0 4.8 4.8 chr19 41363984 41364088 (17764895) + MamGypLTR3 LTR/Gypsy 705 809 (30) 4190786 297 36.6 5.4 5.0 chr19 46915877 46916135 (12212848) C MamGyp-int LTR/Gypsy (4570) 492 233 4201877 568 38.1 1.7 2.1 chr19 46931222 46931642 (12197341) C MamGyp-int LTR/Gypsy (4579) 483 65 4201914 307 26.3 8.3 1.7 chr19 46971715 46971834 (12157149) C MamGyp-int LTR/Gypsy (2909) 2153 2026 4202022 1233 34.0 1.1 2.8 chr19 46973841 46974379 (12154604) C MamGyp-int LTR/Gypsy (4522) 540 11 4202022 306 35.0 2.5 3.3 chr19 46998451 46998725 (12130258) C MamGyp-int LTR/Gypsy (4687) 375 103 4202086 231 32.0 1.3 0.0 chr19 53708678 53708752 (5420231) C MamGypLTR1c LTR/Gypsy (223) 580 505 4216862 231 12.0 8.0 0.0 chr19 56582608 56582657 (2546326) C LTR81A LTR/Gypsy (415) 935 882 4222801 417 33.7 3.4 5.2 chr22 16277203 16277471 (35027095) + MamGypLTR3 LTR/Gypsy 546 809 (30) 4227728 413 22.9 5.2 7.8 chr22 17066477 17066703 (34237863) C MamGypLTR2b LTR/Gypsy (6) 1062 696 4228421 339 35.6 7.6 6.0 chr22 17066875 17067241 (34237325) C MamGypLTR2b LTR/Gypsy (548) 374 2 4228422 631 27.3 8.7 2.2 chr22 25570963 25571239 (25733327) C MamGypLTR3 LTR/Gypsy (399) 440 146 4242104 455 22.9 8.0 4.0 chr22 25878164 25878363 (25426203) C LTR81B LTR/Gypsy (1185) 208 1 4242731 304 28.7 2.5 2.3 chr22 27174767 27174934 (24129632) + MamGypLTR2b LTR/Gypsy 630 908 (14) 4245493 250 15.5 6.5 7.8 chr22 27241486 27241562 (24063004) C LTR81A LTR/Gypsy (1151) 199 124 4245656 577 22.8 3.1 5.6 chr22 27597138 27597332 (23707234) C MamGypLTR1c LTR/Gypsy (0) 803 614 4246511 428 31.1 10.5 4.0 chr22 27752219 27752446 (23552120) + MamGypLTR3 LTR/Gypsy 550 792 (47) 4246847 502 33.9 3.5 2.5 chr22 28961767 28961963 (22342603) + LTR81A LTR/Gypsy 38 236 (917) 4248992 588 27.6 9.3 7.0 chr22 28962266 28962565 (22342001) + LTR81A LTR/Gypsy 1044 1350 (0) 4248992 392 30.1 13.9 4.6 chr22 33041559 33041861 (18262705) + MamGypLTR1d LTR/Gypsy 1 331 (482) 4257404 321 25.6 0.6 15.7 chr22 33041974 33042153 (18262413) + MamGypLTR1d LTR/Gypsy 345 506 (307) 4257404 295 30.7 13.9 2.9 chr22 33052424 33052661 (18251905) + LTR81A LTR/Gypsy 9 272 (1078) 4257428 305 26.5 2.5 5.9 chr22 33528889 33529007 (17775559) + MamGypLTR1b LTR/Gypsy 94 210 (572) 4258422 422 30.9 14.1 4.4 chr22 33651302 33651599 (17652967) + MamGypLTR1a LTR/Gypsy 477 803 (0) 4258621 245 24.1 8.2 2.4 chr22 34482672 34482756 (16821810) C LTR81A LTR/Gypsy (1227) 123 34 4260306 295 36.7 8.5 2.0 chr22 34484040 34484192 (16820374) C MamGyp-int LTR/Gypsy (190) 4872 4710 4260311 421 32.1 11.2 4.5 chr22 34484552 34484818 (16819748) C LTR81 LTR/Gypsy (491) 698 414 4260313 231 22.1 7.7 5.5 chr22 34709483 34709573 (16594993) + MamGypLTR1b LTR/Gypsy 690 782 (0) 4260730 480 30.2 7.3 7.0 chr22 35043625 35043926 (16260640) C MamGypLTR3 LTR/Gypsy (35) 804 502 4261309 338 25.4 7.9 4.3 chr22 35148813 35148952 (16155614) C MamGypLTR2c LTR/Gypsy (922) 146 2 4261461 1380 30.1 10.9 4.8 chr22 35279709 35280424 (16024142) + MamGypLTR2c LTR/Gypsy 281 1040 (28) 4261666 459 24.7 18.6 2.1 chr22 35483312 35483505 (15821061) C MamGypLTR2b LTR/Gypsy (1) 921 696 4262088 351 34.7 2.2 2.2 chr22 35994666 35994845 (15309721) + MamGypLTR3 LTR/Gypsy 656 835 (4) 4263240 825 31.5 6.8 2.8 chr22 36026885 36027341 (15277225) + LTR81C LTR/Gypsy 475 949 (204) 4263309 286 23.4 2.5 2.5 chr22 36433908 36433986 (14870580) C LTR81A LTR/Gypsy (1164) 186 108 4264033 441 25.8 4.4 1.9 chr22 36463941 36464051 (14840515) + MamGypLTR1c LTR/Gypsy 636 749 (54) 4264116 441 25.8 4.4 1.9 chr22 36464353 36464398 (14840168) + MamGypLTR1c LTR/Gypsy 750 796 (7) 4264116 409 29.0 4.1 1.2 chr22 37491121 37491291 (13813275) + MamGypLTR2c LTR/Gypsy 832 1007 (61) 4266267 391 30.8 4.5 3.4 chr22 38187908 38188085 (13116481) C MamGypLTR3 LTR/Gypsy (18) 821 642 4267730 226 20.4 1.8 3.6 chr22 38531708 38531763 (12772803) C MamGypLTR1d LTR/Gypsy (0) 813 759 4268485 427 30.6 2.4 6.1 chr22 38535273 38535415 (12769151) + MamGypLTR1d LTR/Gypsy 610 751 (62) 4268494 427 30.6 2.4 6.1 chr22 38535742 38535808 (12768758) + MamGypLTR1d LTR/Gypsy 752 813 (0) 4268494 252 31.3 6.9 6.2 chr22 40201567 40201759 (11102807) + MamGypLTR2b LTR/Gypsy 672 881 (187) 4271854 1218 22.9 5.1 3.2 chr22 41105923 41106238 (10198328) + LTR81A LTR/Gypsy 27 348 (1002) 4273620 307 31.4 9.5 2.1 chr22 41106803 41107043 (10197523) + LTR81A LTR/Gypsy 478 736 (453) 4273620 257 27.6 21.7 1.6 chr22 41107691 41107874 (10196692) + LTR81A LTR/Gypsy 933 1153 (0) 4273620 301 25.2 13.9 2.0 chr22 41385598 41385698 (9918868) + LTR81A LTR/Gypsy 97 209 (1141) 4274261 431 30.7 20.6 3.9 chr22 42427676 42427689 (8876877) C MamGypLTR1a LTR/Gypsy (0) 784 771 4276662 431 30.7 20.6 3.9 chr22 42427998 42428317 (8876249) C MamGypLTR1a LTR/Gypsy (14) 770 394 4276662 365 29.2 6.5 4.8 chr22 42868285 42868514 (8436052) + LTR81A LTR/Gypsy 66 299 (1094) 4277475 466 25.1 4.2 10.8 chr22 45449331 45449404 (5855162) C LTR81A LTR/Gypsy (1102) 248 188 4282315 466 25.1 4.2 10.8 chr22 45449597 45449735 (5854831) C LTR81A LTR/Gypsy (1163) 187 49 4282315 252 26.6 3.1 4.1 chr22 46946774 46946871 (4357695) C LTR81C LTR/Gypsy (32) 1121 1025 4284806 265 32.7 3.0 3.0 chr22 48590387 48590550 (2714016) C MamGypLTR2b LTR/Gypsy (12) 910 747 4287007 260 26.0 9.6 3.9 chr22 48590991 48591094 (2713472) C MamGypLTR2b LTR/Gypsy (669) 399 290 4287007 328 36.0 6.9 0.9 chr22 49235615 49235830 (2068736) C LTR81A LTR/Gypsy (54) 1296 1068 4287726 526 34.5 6.1 3.9 chr22 51179485 51179846 (124720) C MamGypLTR2c LTR/Gypsy (87) 981 612 4290093 302 30.4 5.0 3.4 chr21 9501620 9501738 (38628157) + MamGypLTR3 LTR/Gypsy 476 596 (243) 4290293 253 32.8 2.2 3.0 chr21 9999110 9999244 (38130651) C MamGypLTR1d LTR/Gypsy (21) 761 628 4290819 364 36.2 0.6 1.8 chr21 9999733 9999898 (38129997) C MamGypLTR1d LTR/Gypsy (241) 572 409 4290819 604 34.4 7.0 10.7 chr21 10132196 10132833 (37997062) + MamGypLTR1c LTR/Gypsy 2 616 (187) 4290922 260 32.3 0.8 3.8 chr21 10133263 10133394 (37996501) + MamGypLTR1c LTR/Gypsy 634 761 (21) 4290922 231 30.5 4.4 6.6 chr21 14419091 14419227 (33710668) C MamGypLTR3 LTR/Gypsy (209) 630 497 4292052 542 33.8 3.6 6.5 chr21 14992909 14993215 (33136680) C MamGypLTR3 LTR/Gypsy (45) 794 497 4292861 385 29.3 8.0 5.1 chr21 15070118 15070354 (33059541) C LTR81A LTR/Gypsy (339) 1011 768 4292950 1256 35.9 9.5 2.5 chr21 15171863 15172706 (32957189) C LTR81 LTR/Gypsy (207) 982 80 4293083 1256 35.9 9.5 2.5 chr21 15173070 15173142 (32956753) C LTR81 LTR/Gypsy (1110) 79 1 4293083 257 22.7 2.1 7.4 chr21 15210319 15210413 (32919482) + LTR81A LTR/Gypsy 1218 1307 (43) 4293134 311 32.2 5.8 9.7 chr21 15341567 15341824 (32788071) + MamGypLTR3 LTR/Gypsy 497 744 (95) 4293324 247 30.1 14.9 1.4 chr21 15608545 15608692 (32521203) + MamGypLTR1c LTR/Gypsy 636 803 (0) 4293694 332 29.2 20.1 5.4 chr21 16565789 16565863 (31564032) C MamGypLTR3 LTR/Gypsy (9) 830 762 4294909 332 29.2 20.1 5.4 chr21 16566194 16566486 (31563409) C MamGypLTR3 LTR/Gypsy (78) 761 408 4294909 261 26.6 2.0 5.0 chr21 16566700 16566798 (31563097) C MamGypLTR3 LTR/Gypsy (680) 159 64 4294909 989 28.9 5.2 4.4 chr21 16580837 16581357 (31548538) + MamGypLTR1a LTR/Gypsy 254 778 (6) 4294928 593 30.5 6.5 3.5 chr21 16684763 16685102 (31444793) + LTR81C LTR/Gypsy 3 352 (801) 4295077 249 32.6 9.2 9.2 chr21 16685111 16685262 (31444633) + MamGypLTR2c LTR/Gypsy 377 528 (540) 4295078 271 20.2 15.5 0.0 chr21 16782203 16782286 (31347609) C MamGypLTR1b LTR/Gypsy (42) 740 644 4295196 279 29.1 1.5 0.0 chr21 16923668 16923765 (31206130) + MamGypLTR1a LTR/Gypsy 637 738 (44) 4295381 355 33.3 0.9 4.7 chr21 17056454 17056560 (31073335) C LTR81 LTR/Gypsy (721) 468 366 4295577 235 23.5 1.4 1.4 chr21 17309047 17309115 (30820780) + MamGypLTR2b LTR/Gypsy 826 894 (28) 4295917 616 24.3 4.5 5.0 chr21 17438255 17438437 (30691458) + LTR81C LTR/Gypsy 947 1128 (25) 4296080 385 28.6 8.1 6.5 chr21 18329886 18330132 (29799763) C MamGypLTR1c LTR/Gypsy (0) 803 553 4297170 403 25.2 0.1 0.0 chr21 18332779 18332880 (29797015) C MamGypLTR1c LTR/Gypsy (593) 220 118 4297170 324 33.1 5.4 2.0 chr21 18488603 18488750 (29641145) + MamGypLTR3 LTR/Gypsy 636 788 (51) 4297371 237 24.5 0.0 0.0 chr21 18609113 18609165 (29520730) + MamGypLTR2c LTR/Gypsy 423 475 (593) 4297484 258 31.6 8.7 8.6 chr21 18609773 18610032 (29519863) + LTR81C LTR/Gypsy 832 1290 (60) 4297486 229 24.0 5.3 1.3 chr21 18629608 18629683 (29500212) C MamGypLTR2c LTR/Gypsy (44) 1024 946 4297505 246 31.6 12.6 9.6 chr21 19023429 19023929 (29105966) + MamGypLTR1b LTR/Gypsy 47 562 (220) 4298142 307 22.2 8.8 8.0 chr21 19035599 19035735 (29094160) + MamGypLTR1b LTR/Gypsy 4 141 (641) 4298161 292 30.7 7.1 4.6 chr21 19035803 19036041 (29093854) + MamGypLTR1b LTR/Gypsy 536 780 (2) 4298161 262 29.1 4.8 1.0 chr21 19119874 19119977 (29009918) C MamGypLTR3 LTR/Gypsy (17) 822 715 4298292 258 34.7 0.7 2.0 chr21 19217712 19217858 (28912037) C MamGypLTR2b LTR/Gypsy (4) 918 774 4298425 442 33.5 1.9 2.4 chr21 19252340 19252544 (28877351) + MamGypLTR2c LTR/Gypsy 315 518 (550) 4298479 579 21.1 1.3 11.4 chr21 19258605 19258840 (28871055) C LTR81A LTR/Gypsy (1014) 336 125 4298490 225 22.6 4.0 11.4 chr21 19287790 19287964 (28841931) + MamGypLTR1c LTR/Gypsy 40 201 (602) 4298527 226 35.0 0.0 0.0 chr21 19288047 19288106 (28841789) + MamGypLTR1c LTR/Gypsy 350 409 (404) 4298527 308 26.5 2.2 10.3 chr21 19288384 19288610 (28841285) + MamGypLTR1c LTR/Gypsy 480 692 (121) 4298527 242 35.5 2.6 2.6 chr21 19557060 19557172 (28572723) C MamGypLTR1b LTR/Gypsy (298) 484 372 4298901 507 37.6 10.1 4.3 chr21 20312977 20313847 (27816048) + LTR81C LTR/Gypsy 149 1319 (31) 4299837 345 33.2 10.1 0.5 chr21 20794685 20794872 (27335023) + MamGypLTR1d LTR/Gypsy 596 801 (12) 4300530 502 29.6 11.0 4.1 chr21 21720422 21720738 (26409157) + LTR81B LTR/Gypsy 1053 1391 (2) 4301833 246 36.8 0.9 2.8 chr21 23123016 23123124 (25006771) + MamGypLTR1c LTR/Gypsy 477 583 (220) 4303802 388 28.7 2.0 2.0 chr21 24061083 24061228 (24068667) C MamGypLTR1a LTR/Gypsy (626) 158 13 4305110 299 39.5 1.8 1.2 chr21 24489845 24490013 (23639882) C MamGyp-int LTR/Gypsy (4221) 841 672 4305733 341 32.9 5.1 0.7 chr21 24490508 24490645 (23639250) C MamGyp-int LTR/Gypsy (4869) 193 50 4305733 579 35.8 6.1 6.1 chr21 25106657 25106752 (23023143) + LTR81A LTR/Gypsy 445 522 (871) 4306598 644 35.3 6.7 5.4 chr21 25107053 25107877 (23022018) + LTR81A LTR/Gypsy 523 1322 (28) 4306598 336 32.3 6.8 9.9 chr21 25354132 25354485 (22775410) + MamGypLTR1c LTR/Gypsy 452 794 (9) 4307012 309 32.5 3.3 0.8 chr21 25903415 25903535 (22226360) + MamGypLTR1b LTR/Gypsy 85 208 (574) 4307832 271 33.2 19.5 3.2 chr21 26194625 26194814 (21935081) C MamGypLTR3 LTR/Gypsy (175) 664 444 4308240 270 37.3 11.2 1.6 chr21 26452595 26452782 (21677113) + LTR81B LTR/Gypsy 645 850 (543) 4308616 262 26.2 9.5 4.1 chr21 26628282 26628428 (21501467) + MamGypLTR2c LTR/Gypsy 107 261 (807) 4308845 284 31.5 4.4 2.6 chr21 26629134 26629247 (21500648) + MamGypLTR1c LTR/Gypsy 357 472 (331) 4308848 268 25.5 5.0 11.3 chr21 26783926 26784084 (21345811) + MamGypLTR1d LTR/Gypsy 40 189 (624) 4309056 254 35.9 1.8 2.8 chr21 26784455 26784563 (21345332) + MamGypLTR1d LTR/Gypsy 481 588 (225) 4309056 322 29.5 12.2 5.0 chr21 26784582 26784811 (21345084) + MamGypLTR1c LTR/Gypsy 534 801 (2) 4309057 379 30.7 11.7 8.5 chr21 26832237 26832671 (21297224) C MamGypLTR1c LTR/Gypsy (354) 449 1 4309117 314 27.9 8.7 4.9 chr21 27766285 27766548 (20363347) + MamGypLTR1a LTR/Gypsy 1 274 (510) 4310534 228 20.0 3.3 0.0 chr21 27766910 27766969 (20362926) + MamGypLTR1a LTR/Gypsy 706 767 (17) 4310534 284 27.4 4.9 7.4 chr21 27981988 27982109 (20147786) C LTR81C LTR/Gypsy (947) 206 88 4310843 318 26.1 4.3 0.0 chr21 29103629 29103720 (19026175) C LTR81AB LTR/Gypsy (172) 106 11 4312394 1130 31.9 10.4 1.8 chr21 29723881 29724484 (18405411) + LTR81C LTR/Gypsy 470 1125 (28) 4313246 280 30.1 15.9 1.0 chr21 29824941 29825141 (18304754) + LTR81C LTR/Gypsy 889 1119 (34) 4313379 445 26.1 5.7 8.0 chr21 29850451 29850734 (18279161) C MamGypLTR1a LTR/Gypsy (403) 381 111 4313413 263 30.2 9.2 1.6 chr21 29883196 29883380 (18246515) + MamGypLTR2c LTR/Gypsy 809 1007 (61) 4313462 327 22.2 12.0 0.0 chr21 30587383 30587490 (17542405) + LTR81A LTR/Gypsy 72 192 (1158) 4314569 262 32.4 4.6 10.2 chr21 30877409 30877693 (17252202) + MamGypLTR1d LTR/Gypsy 465 733 (80) 4315032 519 35.1 5.5 1.4 chr21 30878399 30878673 (17251222) + MamGyp-int LTR/Gypsy 553 838 (4224) 4315035 339 33.9 0.8 0.8 chr21 30879480 30879607 (17250288) + MamGyp-int LTR/Gypsy 1651 1778 (3284) 4315035 281 35.8 16.0 0.4 chr21 30917021 30917264 (17212631) + MamGypLTR2c LTR/Gypsy 10 291 (777) 4315090 1121 33.5 11.3 4.2 chr21 30918086 30918952 (17210943) C MamGypLTR2c LTR/Gypsy (1) 1067 139 4315091 225 31.8 2.1 5.4 chr21 31301066 31301158 (16828737) + MamGypLTR2c LTR/Gypsy 668 757 (311) 4315658 315 33.3 7.0 7.2 chr21 31534532 31534919 (16594976) C MamGypLTR2b LTR/Gypsy (476) 446 60 4315989 232 20.7 6.9 0.0 chr21 31536136 31536193 (16593702) + MamGypLTR1d LTR/Gypsy 730 791 (22) 4315992 356 30.6 5.3 2.6 chr21 31987979 31988206 (16141689) + MamGypLTR2b LTR/Gypsy 684 917 (5) 4316584 744 32.3 6.7 1.2 chr21 32391915 32392243 (15737652) C MamGypLTR1c LTR/Gypsy (0) 803 457 4317196 334 26.7 15.2 2.2 chr21 32392509 32392692 (15737203) C MamGypLTR1c LTR/Gypsy (594) 209 2 4317196 288 29.4 3.5 0.0 chr21 32417542 32417626 (15712269) + LTR81 LTR/Gypsy 110 197 (992) 4317235 436 25.8 8.6 6.5 chr21 32430982 32431213 (15698682) C MamGypLTR2c LTR/Gypsy (65) 1003 767 4317261 270 23.1 1.3 1.3 chr21 32431887 32431965 (15697930) C MamGypLTR2c LTR/Gypsy (839) 229 151 4317261 708 30.3 7.4 2.1 chr21 32558543 32558825 (15571070) + MamGypLTR1b LTR/Gypsy 409 706 (76) 4317461 304 31.5 4.7 0.0 chr21 33026010 33026136 (15103759) + LTR81C LTR/Gypsy 974 1106 (47) 4318360 271 25.8 7.3 3.1 chr21 33466549 33466644 (14663251) C MamGypLTR1a LTR/Gypsy (682) 102 3 4319142 258 34.9 4.9 1.4 chr21 34259271 34259435 (13870460) C LTR81C LTR/Gypsy (452) 701 554 4320379 401 27.8 18.0 0.5 chr21 35566346 35566550 (12563345) C MamGypLTR1a LTR/Gypsy (514) 268 14 4322627 1325 26.2 10.1 9.8 chr21 35649462 35650040 (12479855) + LTR81B LTR/Gypsy 17 605 (788) 4322751 1325 26.2 10.1 9.8 chr21 35650341 35650441 (12479454) + LTR81B LTR/Gypsy 606 699 (694) 4322751 516 24.1 7.3 12.0 chr21 35650749 35651116 (12478779) + LTR81B LTR/Gypsy 1037 1387 (6) 4322751 435 19.9 9.8 6.6 chr21 35712746 35712928 (12416967) + LTR81B LTR/Gypsy 1198 1386 (7) 4322827 368 18.2 6.8 0.0 chr21 35777785 35777872 (12352023) C MamGypLTR1a LTR/Gypsy (0) 784 691 4322954 386 28.6 12.8 5.8 chr21 35777996 35778221 (12351674) C MamGypLTR1b LTR/Gypsy (316) 466 225 4322955 325 27.5 9.7 3.2 chr21 35778253 35778376 (12351519) C MamGypLTR1b LTR/Gypsy (614) 168 37 4322955 643 29.0 5.3 5.3 chr21 35800769 35801052 (12328843) C MamGypLTR3 LTR/Gypsy (12) 827 544 4323000 827 28.2 4.2 2.3 chr21 35873419 35873679 (12256216) + MamGyp-int LTR/Gypsy 4797 5062 (0) 4323110 419 39.0 8.0 2.7 chr21 35884290 35884774 (12245121) C MamGyp-int LTR/Gypsy (4207) 855 345 4323124 237 22.9 0.0 3.2 chr21 36134539 36134601 (11995294) C MamGypLTR2b LTR/Gypsy (3) 919 859 4323488 295 31.3 5.9 3.3 chr21 36135147 36135298 (11994597) C MamGypLTR2b LTR/Gypsy (71) 851 696 4323488 738 23.6 4.2 4.2 chr21 36648221 36648485 (11481410) + LTR81AB LTR/Gypsy 1 265 (13) 4324203 329 27.1 10.7 2.5 chr21 36652578 36652736 (11477159) + LTR81C LTR/Gypsy 925 1096 (57) 4324211 251 15.0 15.4 3.9 chr21 37130310 37130413 (10999482) + MamGypLTR2b LTR/Gypsy 807 922 (0) 4324917 527 30.5 6.8 0.8 chr21 37377748 37377995 (10751900) + LTR81B LTR/Gypsy 28 290 (1103) 4325303 319 25.3 7.8 4.8 chr21 37378936 37379076 (10750819) + LTR81B LTR/Gypsy 1183 1328 (65) 4325303 319 25.3 7.8 4.8 chr21 37379370 37379393 (10750502) + LTR81B LTR/Gypsy 1329 1353 (40) 4325303 250 19.6 0.0 0.0 chr21 37829088 37829138 (10300757) + MamGypLTR1b LTR/Gypsy 688 738 (44) 4326245 490 29.4 9.3 0.4 chr21 37865687 37865932 (10263963) + LTR81A LTR/Gypsy 171 438 (912) 4326302 360 21.6 5.8 3.3 chr21 37933037 37933156 (10196739) C LTR81B LTR/Gypsy (26) 1367 1245 4326408 284 31.0 5.0 3.3 chr21 37934009 37934128 (10195767) C LTR81B LTR/Gypsy (863) 530 409 4326410 239 25.5 3.6 1.8 chr21 37934096 37934151 (10195744) C LTR81B LTR/Gypsy (971) 218 162 4326410 830 20.6 2.5 3.5 chr21 37934157 37934357 (10195538) C LTR81B LTR/Gypsy (1088) 305 107 4326411 490 25.2 4.1 5.9 chr21 38039638 38039806 (10090089) C MamGypLTR2c LTR/Gypsy (43) 1025 860 4326596 476 32.2 0.8 0.8 chr21 38433160 38433281 (9696614) C MamGypLTR1d LTR/Gypsy (186) 627 506 4327222 362 28.2 0.0 0.0 chr21 38646674 38646776 (9483119) + MamGypLTR2c LTR/Gypsy 953 1055 (13) 4327548 340 31.5 1.5 0.8 chr21 38940776 38940906 (9188989) + MamGypLTR1a LTR/Gypsy 133 264 (520) 4328067 388 32.2 4.2 1.9 chr21 39120382 39120596 (9009299) + MamGypLTR1a LTR/Gypsy 562 781 (3) 4328315 560 32.9 13.1 1.8 chr21 39260745 39261087 (8868808) + MamGypLTR2c LTR/Gypsy 16 397 (671) 4328485 512 29.9 6.3 7.4 chr21 39261233 39261583 (8868312) + MamGypLTR2c LTR/Gypsy 718 1064 (4) 4328485 519 23.0 8.3 2.6 chr21 39398791 39398946 (8730949) + MamGypLTR2c LTR/Gypsy 868 1032 (36) 4328679 272 27.7 1.6 8.2 chr21 39415774 39415895 (8714000) C MamGypLTR3 LTR/Gypsy (345) 494 381 4328706 373 31.6 12.0 6.2 chr21 39515966 39516339 (8613556) C MamGypLTR3 LTR/Gypsy (19) 820 425 4328865 385 32.5 8.8 0.0 chr21 39708286 39708445 (8421450) + MamGypLTR1c LTR/Gypsy 67 240 (563) 4329089 230 25.3 16.3 5.4 chr21 40040289 40040380 (8089515) + LTR81B LTR/Gypsy 178 279 (910) 4329504 407 22.3 11.2 7.9 chr21 40041194 40041407 (8088488) + LTR81B LTR/Gypsy 1167 1387 (6) 4329504 369 30.5 8.9 1.9 chr21 40479054 40479267 (7650628) + LTR81 LTR/Gypsy 313 431 (758) 4330189 284 34.4 3.0 0.8 chr21 40504914 40505045 (7624850) C MamGypLTR1d LTR/Gypsy (0) 813 679 4330223 253 29.1 2.5 3.3 chr21 40784249 40784369 (7345526) + LTR81C LTR/Gypsy 127 246 (32) 4330723 552 27.3 10.4 7.9 chr21 40785017 40785448 (7344447) + LTR81C LTR/Gypsy 770 1343 (7) 4330723 319 39.3 4.5 1.5 chr21 40797078 40797276 (7332619) + MamGyp-int LTR/Gypsy 409 613 (4449) 4330748 515 35.8 7.1 4.9 chr21 40797392 40797717 (7332178) + MamGyp-int LTR/Gypsy 776 1108 (3954) 4330748 311 32.5 14.2 0.0 chr21 40797916 40798035 (7331860) + MamGypLTR1b LTR/Gypsy 487 623 (159) 4330749 276 17.0 4.3 0.0 chr21 41339010 41339056 (6790839) C MamGypLTR2c LTR/Gypsy (710) 358 310 4331534 351 33.1 5.3 8.9 chr21 41339666 41340003 (6789892) C MamGypLTR2c LTR/Gypsy (710) 358 33 4331534 228 25.4 0.0 3.3 chr21 41369589 41369649 (6760246) C MamGypLTR1d LTR/Gypsy (0) 813 755 4331579 264 29.1 3.6 9.7 chr21 42126749 42127026 (6002869) + LTR81AB LTR/Gypsy 108 378 (972) 4332602 238 25.4 1.7 0.0 chr21 42127587 42127645 (6002250) + LTR81AB LTR/Gypsy 691 750 (600) 4332602 331 23.0 13.2 3.5 chr21 42902060 42902203 (5227692) C MamGypLTR1c LTR/Gypsy (632) 171 14 4333691 255 28.9 17.3 0.7 chr21 43199989 43200138 (4929757) C MamGypLTR1a LTR/Gypsy (592) 192 18 4334075 356 28.2 5.9 15.2 chr21 43628815 43629169 (4500726) + MamGypLTR1b LTR/Gypsy 1 322 (460) 4334669 240 23.1 1.9 0.0 chr21 43780907 43780958 (4348937) + LTR81B LTR/Gypsy 179 231 (958) 4334847 272 26.1 7.2 7.2 chr21 43781097 43781290 (4348605) + LTR81B LTR/Gypsy 1168 1361 (32) 4334847 265 30.6 10.4 1.6 chr21 44063813 44063986 (4065909) + MamGypLTR3 LTR/Gypsy 586 777 (62) 4335201 522 29.9 14.0 5.2 chr6_ssto_hap7 325849 326176 (4602391) + MamGypLTR3 LTR/Gypsy 466 822 (17) 4340770 276 18.1 18.8 2.1 chr6_ssto_hap7 1417904 1417999 (3510568) + LTR81A LTR/Gypsy 1067 1178 (172) 4342086 233 21.9 6.2 1.5 chr6_ssto_hap7 1607126 1607190 (3321377) C LTR81 LTR/Gypsy (38) 1151 1084 4342376 342 31.3 0.7 10.7 chr6_ssto_hap7 1810311 1810460 (3118107) C MamGypLTR3 LTR/Gypsy (244) 595 461 4342642 226 25.4 1.5 3.1 chr6_ssto_hap7 1953009 1953073 (2975494) + LTR81A LTR/Gypsy 416 479 (871) 4342879 345 28.5 6.7 4.4 chr6_ssto_hap7 2130098 2130277 (2798290) C MamGypLTR1b LTR/Gypsy (45) 737 554 4343103 284 26.3 8.6 4.3 chr6_ssto_hap7 2130598 2130736 (2797831) C MamGypLTR1b LTR/Gypsy (636) 146 2 4343103 484 23.7 5.7 1.3 chr6_ssto_hap7 2136557 2136714 (2791853) + MamGypLTR1b LTR/Gypsy 586 750 (32) 4343116 251 23.6 5.8 13.6 chr6_ssto_hap7 2309579 2309784 (2618783) + LTR81A LTR/Gypsy 1159 1348 (2) 4343139 254 27.4 4.1 0.0 chr6_ssto_hap7 2366163 2366235 (2562332) C MamGypLTR1a LTR/Gypsy (99) 685 610 4343215 243 23.7 3.8 5.0 chr6_ssto_hap7 3726986 3727065 (1201502) + MamGypLTR2b LTR/Gypsy 1 79 (843) 4344858 375 26.1 3.2 3.2 chr6_ssto_hap7 3727517 3727639 (1200928) + MamGypLTR2b LTR/Gypsy 775 897 (25) 4344858 1219 27.8 9.2 3.2 chr6_ssto_hap7 4449641 4450226 (478341) + MamGypLTR1a LTR/Gypsy 114 721 (63) 4345809 266 32.1 2.9 6.5 chr6_ssto_hap7 4464202 4464371 (464196) C LTR81C LTR/Gypsy (165) 988 825 4345828 251 24.0 22.8 4.1 chr6_ssto_hap7 4465268 4465450 (463117) C LTR81C LTR/Gypsy (1146) 247 30 4345828 422 33.0 11.6 7.5 chr6_mcf_hap5 288220 288847 (4544551) + MamGypLTR3 LTR/Gypsy 169 822 (17) 4346667 276 18.1 18.8 2.1 chr6_mcf_hap5 1469341 1469436 (3363962) + LTR81A LTR/Gypsy 1067 1178 (172) 4347926 342 31.3 0.7 10.7 chr6_mcf_hap5 1859887 1860036 (2973362) C MamGypLTR3 LTR/Gypsy (244) 595 461 4348229 226 25.4 1.5 3.1 chr6_mcf_hap5 2002595 2002659 (2830739) + LTR81A LTR/Gypsy 416 479 (871) 4348471 425 29.3 12.8 5.1 chr6_mcf_hap5 2189298 2189686 (2643712) C MamGypLTR1a LTR/Gypsy (297) 487 69 4348629 254 27.4 4.1 0.0 chr6_mcf_hap5 2413120 2413192 (2420206) C MamGypLTR1a LTR/Gypsy (99) 685 610 4348965 243 23.7 3.8 5.0 chr6_mcf_hap5 3759101 3759180 (1074218) + MamGypLTR2b LTR/Gypsy 1 79 (843) 4350671 375 26.1 3.2 3.2 chr6_mcf_hap5 3759632 3759754 (1073644) + MamGypLTR2b LTR/Gypsy 775 897 (25) 4350671 1237 27.3 9.3 2.9 chr6_mcf_hap5 4305858 4306374 (527024) + MamGypLTR1a LTR/Gypsy 172 721 (63) 4351399 269 32.1 2.9 6.5 chr6_mcf_hap5 4320349 4320518 (512880) C LTR81C LTR/Gypsy (165) 988 825 4351419 243 24.0 22.8 4.1 chr6_mcf_hap5 4321415 4321597 (511801) C LTR81C LTR/Gypsy (1100) 250 30 4351419 854 22.5 5.6 5.2 chr6_mcf_hap5 4800896 4801200 (32198) + LTR81B LTR/Gypsy 9 314 (1079) 4351858 422 33.0 11.6 7.5 chr6_cox_hap2 503483 504110 (4291261) + MamGypLTR3 LTR/Gypsy 169 822 (17) 4352790 282 18.1 18.8 2.1 chr6_cox_hap2 1599592 1599687 (3195684) + LTR81A LTR/Gypsy 1067 1178 (172) 4354222 233 21.9 6.2 1.5 chr6_cox_hap2 1789153 1789217 (3006154) C LTR81 LTR/Gypsy (38) 1151 1084 4354514 342 31.3 0.7 10.7 chr6_cox_hap2 1990087 1990236 (2805135) C MamGypLTR3 LTR/Gypsy (244) 595 461 4354794 226 25.4 1.5 3.1 chr6_cox_hap2 2132780 2132844 (2662527) + LTR81A LTR/Gypsy 416 479 (871) 4355035 345 28.5 6.7 4.4 chr6_cox_hap2 2309930 2310109 (2485262) C MamGypLTR1b LTR/Gypsy (45) 737 554 4355385 284 26.3 8.6 4.3 chr6_cox_hap2 2310429 2310567 (2484804) C MamGypLTR1b LTR/Gypsy (636) 146 2 4355385 227 27.5 13.6 5.0 chr6_cox_hap2 2310851 2310882 (2484489) + MamGypLTR1c LTR/Gypsy 1 35 (768) 4355386 227 27.5 13.6 5.0 chr6_cox_hap2 2311048 2311213 (2484158) + MamGypLTR1c LTR/Gypsy 36 216 (587) 4355386 484 23.7 5.7 1.3 chr6_cox_hap2 2316385 2316542 (2478829) + MamGypLTR1b LTR/Gypsy 586 750 (32) 4355399 317 29.3 12.8 5.1 chr6_cox_hap2 2319478 2319866 (2475505) C MamGypLTR1a LTR/Gypsy (297) 487 69 4355406 251 23.6 5.8 13.6 chr6_cox_hap2 2489268 2489473 (2305898) + LTR81A LTR/Gypsy 1159 1348 (2) 4355685 228 27.4 4.1 0.0 chr6_cox_hap2 2545903 2545975 (2249396) C MamGypLTR1a LTR/Gypsy (99) 685 610 4355763 243 23.7 3.8 5.0 chr6_cox_hap2 3850731 3850810 (944561) + MamGypLTR2b LTR/Gypsy 1 79 (843) 4357775 368 26.3 3.3 3.3 chr6_cox_hap2 3851263 3851384 (943987) + MamGypLTR2b LTR/Gypsy 776 897 (25) 4357775 1237 27.3 9.3 2.9 chr6_cox_hap2 4413491 4414007 (381364) + MamGypLTR1a LTR/Gypsy 172 721 (63) 4358589 286 32.1 2.9 6.5 chr6_cox_hap2 4427984 4428153 (367218) C LTR81C LTR/Gypsy (165) 988 825 4358609 243 24.0 22.8 4.1 chr6_cox_hap2 4429050 4429232 (366139) C LTR81C LTR/Gypsy (1100) 250 30 4358609 854 22.5 5.6 5.2 chr6_cox_hap2 4770963 4771267 (24104) + LTR81B LTR/Gypsy 9 314 (1079) 4359100 422 33.0 11.6 7.5 chr6_mann_hap4 288070 288697 (4394566) + MamGypLTR3 LTR/Gypsy 169 822 (17) 4359598 282 18.1 18.8 2.1 chr6_mann_hap4 1386012 1386107 (3297156) + LTR81A LTR/Gypsy 1067 1178 (172) 4361028 233 21.9 6.2 1.5 chr6_mann_hap4 1625221 1625285 (3057978) C LTR81 LTR/Gypsy (38) 1151 1084 4361331 342 31.3 0.7 10.7 chr6_mann_hap4 1826100 1826249 (2857014) C MamGypLTR3 LTR/Gypsy (244) 595 461 4361613 226 25.4 1.5 3.1 chr6_mann_hap4 1968804 1968868 (2714395) + LTR81A LTR/Gypsy 416 479 (871) 4361855 397 28.5 6.7 4.4 chr6_mann_hap4 2145958 2146137 (2537126) C MamGypLTR1b LTR/Gypsy (45) 737 554 4362182 289 29.8 11.0 9.3 chr6_mann_hap4 2146241 2146595 (2536668) C MamGypLTR1b LTR/Gypsy (420) 362 2 4362182 267 27.8 12.4 5.7 chr6_mann_hap4 2146879 2146910 (2536353) + MamGypLTR1c LTR/Gypsy 1 35 (768) 4362183 267 28.6 13.3 3.9 chr6_mann_hap4 2147075 2147462 (2535801) + MamGypLTR1c LTR/Gypsy 36 415 (398) 4362183 533 24.7 5.8 1.4 chr6_mann_hap4 2152395 2152572 (2530691) + MamGypLTR1b LTR/Gypsy 586 781 (32) 4362195 425 29.3 12.8 5.1 chr6_mann_hap4 2155502 2155890 (2527373) C MamGypLTR1a LTR/Gypsy (297) 487 69 4362202 251 23.6 5.8 13.6 chr6_mann_hap4 2325682 2325887 (2357376) + LTR81A LTR/Gypsy 1159 1348 (2) 4362417 228 27.4 4.1 0.0 chr6_mann_hap4 2379546 2379618 (2303645) C MamGypLTR1a LTR/Gypsy (99) 685 610 4362489 243 23.7 3.8 5.0 chr6_mann_hap4 3722398 3722477 (960786) + MamGypLTR2b LTR/Gypsy 1 79 (843) 4363980 375 26.1 3.2 3.2 chr6_mann_hap4 3722929 3723051 (960212) + MamGypLTR2b LTR/Gypsy 775 897 (25) 4363980 1275 27.8 9.2 3.2 chr6_mann_hap4 4426120 4426705 (256558) + MamGypLTR1a LTR/Gypsy 114 721 (63) 4364923 281 32.7 2.9 6.5 chr6_mann_hap4 4440676 4440845 (242418) C LTR81C LTR/Gypsy (165) 988 825 4364943 422 33.0 11.6 7.5 chr6_apd_hap1 288111 288738 (4333552) + MamGypLTR3 LTR/Gypsy 169 822 (17) 4365650 282 18.1 18.8 2.1 chr6_apd_hap1 1327688 1327783 (3294507) + LTR81A LTR/Gypsy 1067 1178 (172) 4366607 342 31.3 0.7 10.7 chr6_apd_hap1 1789680 1789829 (2832461) C MamGypLTR3 LTR/Gypsy (244) 595 461 4367044 251 23.6 5.8 13.6 chr6_apd_hap1 2288987 2289192 (2333098) + LTR81A LTR/Gypsy 1159 1348 (2) 4367324 254 27.4 4.1 0.0 chr6_apd_hap1 2345906 2345978 (2276312) C MamGypLTR1a LTR/Gypsy (99) 685 610 4367397 357 26.3 3.3 3.3 chr6_apd_hap1 3695230 3695351 (926939) + MamGypLTR2b LTR/Gypsy 776 897 (25) 4368113 854 22.5 5.6 5.2 chr6_apd_hap1 4613943 4614247 (8043) + LTR81B LTR/Gypsy 9 314 (1079) 4368680 422 33.0 11.6 7.5 chr6_qbl_hap6 288066 288693 (4323291) + MamGypLTR3 LTR/Gypsy 169 822 (17) 4369196 282 18.1 18.8 2.1 chr6_qbl_hap6 1380415 1380510 (3231474) + LTR81A LTR/Gypsy 1067 1178 (172) 4370469 233 21.9 6.2 1.5 chr6_qbl_hap6 1570041 1570105 (3041879) C LTR81 LTR/Gypsy (38) 1151 1084 4370772 342 31.3 0.7 10.7 chr6_qbl_hap6 1770939 1771088 (2840896) C MamGypLTR3 LTR/Gypsy (244) 595 461 4371055 226 25.4 1.5 3.1 chr6_qbl_hap6 1913638 1913702 (2698282) + LTR81A LTR/Gypsy 416 479 (871) 4371299 397 28.5 6.7 4.4 chr6_qbl_hap6 2090795 2090974 (2521010) C MamGypLTR1b LTR/Gypsy (45) 737 554 4371650 289 29.8 11.0 9.3 chr6_qbl_hap6 2091078 2091432 (2520552) C MamGypLTR1b LTR/Gypsy (420) 362 2 4371650 273 28.4 13.0 4.8 chr6_qbl_hap6 2091716 2091747 (2520237) + MamGypLTR1c LTR/Gypsy 1 35 (768) 4371651 273 29.0 13.7 3.3 chr6_qbl_hap6 2091913 2092297 (2519687) + MamGypLTR1c LTR/Gypsy 36 415 (398) 4371651 533 24.7 5.8 1.4 chr6_qbl_hap6 2097220 2097397 (2514587) + MamGypLTR1b LTR/Gypsy 586 781 (32) 4371664 433 29.3 12.8 5.1 chr6_qbl_hap6 2100333 2100721 (2511263) C MamGypLTR1a LTR/Gypsy (297) 487 69 4371671 251 23.6 5.8 13.6 chr6_qbl_hap6 2270780 2270985 (2340999) + LTR81A LTR/Gypsy 1159 1348 (2) 4371946 228 27.4 4.1 0.0 chr6_qbl_hap6 2327001 2327073 (2284911) C MamGypLTR1a LTR/Gypsy (99) 685 610 4372021 357 26.3 3.3 3.3 chr6_qbl_hap6 3641728 3641849 (970135) + MamGypLTR2b LTR/Gypsy 776 897 (25) 4373849 1295 27.6 9.2 3.2 chr6_qbl_hap6 4201019 4201604 (410380) + MamGypLTR1a LTR/Gypsy 114 721 (63) 4374620 298 32.1 2.9 6.5 chr6_qbl_hap6 4215585 4215754 (396230) C LTR81C LTR/Gypsy (165) 988 825 4374640 241 23.4 22.8 4.1 chr6_qbl_hap6 4216651 4216833 (395151) C LTR81C LTR/Gypsy (1100) 250 30 4374640 854 22.5 5.6 5.2 chr6_qbl_hap6 4559394 4559698 (52286) + LTR81B LTR/Gypsy 9 314 (1079) 4375132 427 32.9 11.6 7.5 chr6_dbb_hap3 288080 288707 (4321689) + MamGypLTR3 LTR/Gypsy 169 822 (17) 4375561 282 18.1 18.8 2.1 chr6_dbb_hap3 1381177 1381272 (3229124) + LTR81A LTR/Gypsy 1067 1178 (172) 4376981 233 21.9 6.2 1.5 chr6_dbb_hap3 1570800 1570864 (3039532) C LTR81 LTR/Gypsy (38) 1151 1084 4377282 342 31.3 0.7 10.7 chr6_dbb_hap3 1771665 1771814 (2838582) C MamGypLTR3 LTR/Gypsy (244) 595 461 4377565 226 25.4 1.5 3.1 chr6_dbb_hap3 1914368 1914432 (2695964) + LTR81A LTR/Gypsy 416 479 (871) 4377806 397 28.5 6.7 4.4 chr6_dbb_hap3 2091939 2092118 (2518278) C MamGypLTR1b LTR/Gypsy (45) 737 554 4378159 291 29.8 11.0 9.6 chr6_dbb_hap3 2092224 2092579 (2517817) C MamGypLTR1b LTR/Gypsy (420) 362 2 4378159 285 27.8 12.6 4.3 chr6_dbb_hap3 2092863 2092894 (2517502) + MamGypLTR1c LTR/Gypsy 1 35 (768) 4378160 285 28.6 13.4 3.3 chr6_dbb_hap3 2093060 2093444 (2516952) + MamGypLTR1c LTR/Gypsy 36 415 (398) 4378160 533 24.7 5.8 1.4 chr6_dbb_hap3 2098377 2098554 (2511842) + MamGypLTR1b LTR/Gypsy 586 781 (32) 4378172 425 29.3 12.8 5.1 chr6_dbb_hap3 2101484 2101872 (2508524) C MamGypLTR1a LTR/Gypsy (297) 487 69 4378179 251 23.6 5.8 13.6 chr6_dbb_hap3 2271460 2271665 (2338731) + LTR81A LTR/Gypsy 1159 1348 (2) 4378450 228 27.4 4.1 0.0 chr6_dbb_hap3 2328376 2328448 (2281948) C MamGypLTR1a LTR/Gypsy (99) 685 610 4378523 243 23.7 3.8 5.0 chr6_dbb_hap3 3658424 3658503 (951893) + MamGypLTR2b LTR/Gypsy 1 79 (843) 4380269 389 25.2 3.2 3.2 chr6_dbb_hap3 3658955 3659077 (951319) + MamGypLTR2b LTR/Gypsy 775 897 (25) 4380269 1237 27.3 9.3 2.9 chr6_dbb_hap3 4250345 4250861 (359535) + MamGypLTR1a LTR/Gypsy 172 721 (63) 4381034 269 32.1 2.9 6.5 chr6_dbb_hap3 4264833 4265002 (345394) C LTR81C LTR/Gypsy (165) 988 825 4381054 243 24.0 22.8 4.1 chr6_dbb_hap3 4265899 4266081 (344315) C LTR81C LTR/Gypsy (1100) 250 30 4381054 873 22.5 5.6 5.2 chr6_dbb_hap3 4608470 4608774 (1622) + LTR81B LTR/Gypsy 9 314 (1079) 4381525 275 28.2 6.3 0.9 chr1_gl000192_random 319675 319785 (227711) + LTR81C LTR/Gypsy 109 225 (928) 4385889 275 32.2 12.3 2.1 chr1_gl000192_random 377161 377347 (170149) + MamGypLTR1c LTR/Gypsy 561 766 (37) 4385965 362 32.1 14.1 5.3 chr1_gl000192_random 377429 377839 (169657) + MamGyp-int LTR/Gypsy 74 520 (4542) 4385966 244 32.8 2.2 3.0 chr4_gl000194_random 145602 145736 (45733) C MamGypLTR1c LTR/Gypsy (21) 761 628 4386392 663 34.9 4.8 8.7 chr4_gl000194_random 146164 146805 (44664) C MamGypLTR1c LTR/Gypsy (187) 626 2 4386392 385 29.3 8.0 5.1 chrUn_gl000215 42018 42254 (130291) C LTR81A LTR/Gypsy (339) 1011 768 4388735 1270 35.9 9.5 2.5 chrUn_gl000215 143831 144674 (27871) C LTR81 LTR/Gypsy (207) 982 80 4388863 1270 35.9 9.5 2.5 chrUn_gl000215 145038 145110 (27435) C LTR81 LTR/Gypsy (1110) 79 1 4388863 302 30.4 5.0 3.4 chrUn_gl000217 92249 92367 (79782) C MamGypLTR3 LTR/Gypsy (243) 596 476 4389177 396 33.2 3.8 9.2 chrUn_gl000211 113070 113331 (53235) C MamGypLTR3 LTR/Gypsy (95) 744 497 4389437 385 29.3 8.0 5.1 chrUn_gl000213 51546 51782 (112457) + LTR81A LTR/Gypsy 768 1011 (339) 4389570 542 33.8 3.6 6.5 chrUn_gl000213 128629 128935 (35304) + MamGypLTR3 LTR/Gypsy 497 794 (45) 4389659 579 36.6 5.8 8.3 chrUn_gl000218 128467 129107 (32040) C MamGypLTR1c LTR/Gypsy (187) 626 2 4389865 262 32.3 0.8 3.8 chrUn_gl000221 110483 110614 (44783) C MamGypLTR1c LTR/Gypsy (21) 761 634 4390708 608 33.7 7.2 10.7 chrUn_gl000221 111044 111680 (43717) C MamGypLTR1c LTR/Gypsy (187) 616 2 4390708 290 34.4 1.8 6.4 chr1_gl000191_random 90290 90460 (15973) C MamGypLTR2b LTR/Gypsy (731) 191 29 4390960 329 30.7 13.9 2.9 chrUn_gl000248 1724 1961 (37825) + LTR81A LTR/Gypsy 9 272 (1078) 4392483 560 36.4 4.3 7.6 chrUn_gl000235 33279 33855 (619) + MamGypLTR1c LTR/Gypsy 10 567 (236) 4392903 265 30.2 1.5 4.5 chrUn_gl000235 34341 34472 (2) + MamGypLTR1c LTR/Gypsy 634 761 (21) 4392903 617 34.2 7.0 10.7 chrUn_gl000245 32689 33326 (3325) + MamGypLTR1c LTR/Gypsy 2 616 (187) 4393013 262 32.3 0.8 3.8 chrUn_gl000245 33756 33887 (2764) + MamGypLTR1c LTR/Gypsy 634 761 (21) 4393013