Index of /kundaje/marinovg/oak/various/code/erange-4.0a

	Name	Last modified	Size	Description
	Parent Directory		-
	2011-05-05-ERANGE-test/	2011-05-08 23:05	-
	MakeBamFromRds.py	2011-03-28 23:40	10K
	MakeRdsFromBam.py	2011-03-28 23:40	13K
	MakeRdsFromBam4.py	2011-07-18 21:10	16K
	MakeRdsFromBam5.py	2011-07-19 17:54	18K
	MakeRdsFromBam_v2.py	2011-07-13 18:50	14K
	MakeRdsFromBam_v3.py	2011-07-13 20:55	14K
	Peak.py	2011-03-28 23:40	664
	Peak.pyc	2014-03-04 18:40	1.4K
	ReadDataset.py	2011-07-19 20:16	45K
	ReadDataset.pyc	2014-03-04 18:40	37K
	Region.py	2011-03-28 23:40	2.2K
	Region.pyc	2014-03-04 18:40	2.7K
	__init__.py	2011-03-28 23:40	0
	altSpliceCounts.py	2011-03-28 23:40	5.1K
	analyzego.py	2011-03-28 23:40	2.8K
	bedtoregion.py	2011-03-28 23:40	803
	binstocdf.py	2011-03-28 23:40	1.0K
	buildMatrix.py	2011-03-28 23:40	3.3K
	buildrmaskdb.py	2011-03-28 23:40	1.5K
	buildsnpdb.py	2011-03-28 23:40	2.7K
	cdfdist.py	2011-03-28 23:40	827
	checkrmask.py	2011-03-28 23:40	6.8K
	chiapet/	2011-03-28 23:40	-
	chkSNPrmask.py	2011-03-28 23:40	3.6K
	chksnp.py	2011-03-28 23:40	5.0K
	cistematic/	2014-03-04 18:40	-
	colsum.py	2011-03-28 23:40	816
	combineRPKMs.py	2011-03-28 23:40	2.5K
	combinerds.py	2011-03-28 23:40	4.2K
	commoncode.py	2011-03-28 23:40	28K
	commoncode.pyc	2014-03-04 18:40	21K
	crossmatch.py	2011-03-28 23:40	854
	distalPairs.py	2011-03-28 23:40	5.6K
	docs/	2011-03-28 23:40	-
	farPairs.py	2011-03-28 23:40	6.1K
	featureIntersects.py	2011-03-28 23:40	1.9K
	findMotifs.py	2011-03-28 23:40	4.2K
	findall.py	2011-08-23 21:37	41K
	findall_test.py	2011-04-14 08:55	38K
	fraction.py	2011-03-28 23:40	948
	geneDownstreamBins.py	2011-03-28 23:40	5.1K
	geneLocusBins.py	2011-03-28 23:40	6.2K
	geneLocusCounts.py	2011-03-28 23:40	5.8K
	geneLocusPeaks.py	2011-03-28 23:40	4.1K
	geneMrnaCounts.py	2011-03-28 23:40	7.7K
	geneMrnaCountsWeighted.py	2011-03-28 23:40	8.8K
	geneNeighbors.py	2011-03-28 23:40	5.7K
	geneStallingBins.py	2011-03-28 23:40	6.1K
	geneStartBins.py	2011-03-28 23:40	3.4K
	geneUpstreamBins.py	2011-03-28 23:40	4.6K
	getGOgenes.py	2011-03-28 23:40	3.2K
	getNovelSNPs.py	2011-03-28 23:40	2.3K
	getSNPGeneInfo.py	2011-03-28 23:40	5.3K
	getSNPs.py	2011-03-28 23:40	8.0K
	getallNRSE.py	2011-03-28 23:40	14K
	getallgenes.py	2011-03-28 23:40	11K
	getallsites.py	2011-03-28 23:40	7.8K
	getfasta.py	2011-03-28 23:40	7.2K
	getgosig.py	2011-03-28 23:40	7.3K
	getmers.py	2011-03-28 23:40	1.1K
	getsplicefa.py	2011-03-28 23:40	5.3K
	gfftocis.py	2011-03-28 23:40	1.8K
	gointersects.py	2011-03-28 23:40	901
	intersects.py	2011-03-28 23:40	5.6K
	listGeneFeatures.py	2011-03-28 23:40	1.4K
	makeGraphs.py	2011-03-28 23:40	3.4K
	makeSNPtrack.py	2011-03-28 23:40	2.2K
	makebedfromrds.py	2011-03-28 23:40	16K
	makerdsfrombed.py	2011-03-28 23:40	4.0K
	makerdsfromblat.py	2011-03-28 23:40	13K
	makerdsfrombowtie.py	2011-03-28 23:40	11K
	makerdsfromeland2.py	2011-03-28 23:40	23K
	makesitetrack.py	2011-03-28 23:40	3.3K
	makewiggle.py	2011-03-28 23:40	8.5K
	normalizeExpandedExonic.py	2011-03-28 23:40	7.6K
	normalizeFinalExonic.py	2011-03-28 23:40	5.5K
	partition.py	2011-03-28 23:40	5.7K
	peakstoregion.py	2011-03-28 23:40	1.6K
	plotbardist.py	2011-03-28 23:40	6.2K
	plotnomogram.py	2011-03-28 23:40	3.3K
	plotprofile.py	2011-03-28 23:40	3.8K
	predictSpliceCount.py	2011-03-28 23:40	3.0K
	profilebins.py	2011-03-28 23:40	5.0K
	ratio.py	2011-03-28 23:40	2.5K
	rdsmetadata.py	2011-03-28 23:40	4.2K
	recordLog.py	2011-03-28 23:40	559
	regionBins.py	2011-03-28 23:40	2.4K
	regionCounts.py	2011-03-28 23:40	9.1K
	regionintersects.py	2011-03-28 23:40	8.2K
	regiontobed.py	2011-03-28 23:40	4.3K
	rnaAToIFilter.py	2011-03-28 23:40	779
	rnaEditing.py	2011-03-28 23:40	3.4K
	rnafarPairs.py	2011-03-28 23:40	6.8K
	rnapath/	2011-03-28 23:40	-
	scatterfields.py	2011-03-28 23:40	11K
	siteintersects.py	2011-03-28 23:40	4.5K
	stallCategory.py	2011-03-28 23:40	5.3K
	test/	2011-03-28 23:40	-
	transcripts.py	2011-03-28 23:40	2.2K
	trimreads.py	2011-03-28 23:40	3.8K
	utrChanges.py	2011-03-28 23:40	2.6K
	weighMultireads.py	2011-03-28 23:40	10K