Index of /kundaje/marinovg/oak/various/code/commoncode

	Name	Last modified	Size	Description
	Parent Directory		-
	SOM/	2010-03-10 12:25	-
	erange-bc30aca/	2011-02-04 16:10	-
	ERANGE.3.2.0alpha	2009-04-17 04:36	0
	spikes.regions.txt	2009-12-02 21:25	159
	recordLog.py	2008-12-17 06:09	379
	cdfdist.py	2008-06-19 19:59	435
	colsum.py	2008-06-19 19:59	504
	bedtoregion.py	2008-07-08 06:19	511
	gointersects.py	2008-12-17 05:32	596
	binstocdf.py	2008-06-19 19:59	638
	fraction.py	2008-12-17 05:22	639
	crossmatch.py	2008-06-19 19:59	685
	getmers.py	2008-06-19 19:59	821
	listGeneFeatures.py	2008-12-17 05:52	943
	featureIntersects.py	2008-12-17 05:20	969
	peakstoregion.py	2008-12-17 06:04	1.0K
	transcripts.py	2008-06-19 19:59	1.1K
	buildrmaskdb.py	2008-07-30 16:39	1.1K
	ratio.py	2008-06-19 19:59	1.4K
	combineRPKMs.py	2009-04-17 03:47	1.4K
	makeSNPtrack.py	2009-04-30 04:33	1.4K
	analyzego.py	2008-06-19 19:59	1.5K
	getNovelSNPs.py	2008-12-14 19:37	1.6K
	makesitetrack.py	2009-03-24 23:11	1.8K
	buildMatrix.py	2009-03-09 04:16	1.9K
	getGOgenes.py	2008-12-17 05:25	2.0K
	predictSpliceCount.py	2008-06-19 19:59	2.0K
	ERANGE.copyright	2009-01-29 04:35	2.1K
	rdsmetadata.py	2009-03-17 21:48	2.1K
	buildsnpdb.py	2009-05-14 06:45	2.1K
	utrChanges.py	2009-01-14 04:03	2.2K
	trimreads.py	2009-08-09 12:32	2.3K
	plotprofile.py	2008-06-19 19:59	2.4K
	regionBins.py	2008-12-17 06:11	2.4K
	chkSNPrmask.py	2008-12-14 23:03	2.4K
	runSNPAnalysis.sh	2009-04-23 06:01	2.5K
	chksnp.py	2008-12-15 00:21	2.6K
	makerdsfrombed.py	2009-03-25 10:49	2.6K
	regiontobed.py	2009-05-03 23:29	2.6K
	combinerds.py	2009-09-15 04:00	2.7K
	findMotifs.py	2008-11-07 01:47	2.7K
	plotnomogram.py	2010-02-11 14:59	2.7K
	runRNAPairedAnalysis.sh	2009-09-10 07:14	2.8K
	geneLocusPeaks.py	2008-12-15 04:48	2.8K
	siteintersects.py	2008-12-17 06:15	2.8K
	runStandardAnalysis.sh	2009-09-10 07:14	2.9K
	README.rna-esnp	2009-04-14 04:20	3.0K
	runStrandedAnalysis.sh	2009-09-08 17:29	3.1K
	intersects.py	2008-09-26 18:57	3.2K
	getSNPGeneInfo.py	2009-06-27 06:47	3.2K
	geneUpstreamBins.py	2008-12-15 04:32	3.3K
	geneDownstreamBins.py	2008-12-15 04:49	3.5K
	profilebins.py	2008-06-19 19:59	3.5K
	distalPairs.py	2009-05-31 22:45	3.5K
	geneLocusBins.py	2008-12-15 04:13	3.5K
	partition.py	2009-03-23 06:24	3.5K
	geneStartBins.py	2008-12-16 14:35	3.6K
	normalizeFinalExonic.py	2009-04-17 13:59	3.6K
	geneLocusCounts.py	2008-12-15 02:06	3.7K
	stallCategory.py	2008-06-19 19:59	3.8K
	altSpliceCounts.py	2009-04-16 15:25	3.9K
	getfasta.py	2009-05-04 18:20	4.0K
	getsplicefa.py	2009-05-11 22:31	4.1K
	geneNeighbors.py	2008-06-19 19:59	4.3K
	geneMrnaCounts.py	2009-09-09 18:01	4.4K
	checkrmask.py	2008-12-09 13:20	4.5K
	geneStallingBins.py	2008-12-16 14:42	4.5K
	plotbardist.py	2009-08-03 03:01	4.6K
	normalizeExpandedExonic.py	2009-09-09 10:57	5.1K
	rnafarPairs.py	2009-03-20 14:41	5.3K
	makewiggle.py	2010-06-20 09:00	5.5K
	getallsites.py	2009-03-12 00:16	5.5K
	regionintersects.py	2008-12-17 06:12	5.8K
	getSNPs.py	2009-05-11 16:38	5.9K
	getgosig.py	2008-12-17 05:29	6.2K
	regionCounts.py	2009-12-02 21:25	6.3K
	geneMrnaCountsWeighted.py	2009-09-09 03:39	6.5K
	scatterfields.py	2009-09-09 08:23	7.9K
	weighMultireads.py	2008-12-06 08:25	8.1K
	getallgenes.py	2011-03-14 20:34	8.1K
	README.chip-seq	2009-04-17 03:52	8.4K
	makerdsfrombowtie.py	2011-06-07 21:30	8.9K
	README.rna-seq	2009-04-17 03:47	9.2K
	makerdsfromblat.py	2009-06-02 21:39	10K
	makebedfromrds.py	2010-06-20 08:59	11K
	getallNRSE.py	2008-12-17 05:28	11K
	README.build-rds	2009-08-10 07:31	12K
	MakeRdsFromBam.py	2010-06-28 16:09	13K
	makerdsfromeland2.py	2009-02-17 00:58	19K
	findall.py	2010-01-23 02:00	31K
	commoncode.pyc	2014-05-09 11:47	50K
	commoncode.py	2009-10-08 21:23	69K