<<include colors_fonts_patterns.conf>>

<<include etc/housekeeping.conf>>

<<include ideogram.conf>>
<<include ticks.conf>>

<image>
<<include etc/image.conf>>
</image>

<spacing>
default = 0.01r
</spacing>

karyotype = hg19.karyotype.grey

chromosomes_units           = 10000000
chromosomes_display_default = no
chromosomes                 = chr1;chr2;chr3;chr4;chr5;chr6;chr7;chr8;chr9;chr10;chr11;chr12;chr13;chr14;chr15;chr16;chr17;chr18;chr19;chr20;chr21;chr22;chrX;chrY
#chromosomes                 = chr1.1;chr2.1;chr3.1;chr4.1;chr5.1;chr6.1;chr7.1;chr8.1;chr9.1;chr10.1;chr11.1;chr12.1;chr13.1;chr14.1;chr15.1;chr16.1;chr17.1;chr18.1;chr19.1;chr20.1;chr21.1;chr22.1;chrX.1;chrY.1;chr1.2;chr2.2;chr3.2;chr4.2;chr5.2;chr6.2;chr7.2;chr8.2;chr9.2;chr10.2;chr11.2;chr12.2;chr13.2;chr14.2;chr15.2;chr16.2;chr17.2;chr18.2;chr19.2;chr20.2;chr21.2;chr22.2;chrX.2;chrY.2
angle_offset   = 0

<links>

radius = 0.98r
bezier_radius         = 0r
crest  = 1
bezier_radius_purity = 0.5

<link segdup>
show         = yes
color        = vdgrey
thickness    = 2p
file         = links.txt

</link>
</links>

# <plots>

# type      = histogram
# thickness = 2

# <plot>
# show    = yes
# file    = dm3.1000bp.readCounts.int.shPiwi-vs-shWhite.res.pval0.05.txt-down.merged.bed
# z       = 5
# max_gap = 0u
# fill_under = yes
# fill_color = red
# color   = red
# min     = 0
# max     = 1
# r0      = 0.80r
# r1      = 0.95r
# </plot>

# </plots>