##################################
#                                #
# Last modified 2018/06/12       #
#                                #
# Georgi Marinov                 #
#                                # 
##################################

import sys
import string
import os
from genomelake.backend import extract_fasta_to_file
from genomelake.backend import extract_bigwig_to_file

def run():

    if len(sys.argv) < 2:
        print 'usage: python %s input output' % sys.argv[0]
        sys.exit(1)

    input = sys.argv[1]
    output = sys.argv[2]

#    cmd = 'mkdir ' + output
#    p = os.popen(cmd, "r")

    extract_fasta_to_file(input, output, overwrite=True)

run()