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/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t GLK53_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n GLK53_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t GLK56_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n GLK56_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t GRF2_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n GRF2_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t GRF3_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n GRF3_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t GRF6_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n GRF6_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t GRF7_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n GRF7_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t GRF9_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n GRF9_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t HB102_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n HB102_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t HB117_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n HB117_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t HB122_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n HB122_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t HB15_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n HB15_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t HB22_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n HB22_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t HB54_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n HB54_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t HB67_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n HB67_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t HB68_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n HB68_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t HSF10_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n HSF10_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t HSF24_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n HSF24_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t HSF25_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n HSF25_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t HSF7_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n HSF7_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t LBD16_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n LBD16_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t LBD19_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n LBD19_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t LBD37_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n LBD37_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t LBD5_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n LBD5_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t MADS12_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n MADS12_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t MADS43_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n MADS43_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t MADS68_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n MADS68_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t MADS69_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n MADS69_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t MADS72_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n MADS72_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t MADS73_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n MADS73_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t MYB131_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n MYB131_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t MYB138_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n MYB138_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t MYB40_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n MYB40_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t MYB50_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n MYB50_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t MYB83_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n MYB83_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t MYB94_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n MYB94_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t MYBR101_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n MYBR101_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t MYBR111_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n MYBR111_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t MYBR17_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n MYBR17_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t MYBR52_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n MYBR52_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t MYBR58_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n MYBR58_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NAC115_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NAC115_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NAC116_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NAC116_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NAC12_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NAC12_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NAC20_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NAC20_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NAC25_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NAC25_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NAC27_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NAC27_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NAC28_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NAC28_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NAC33_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NAC33_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NAC3_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NAC3_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NAC42_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NAC42_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NAC49_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NAC49_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NAC71_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NAC71_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NAC74_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NAC74_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NAC86_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NAC86_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NAC91_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NAC91_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NFYA1_LEC1_CA5P16_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NFYA1_LEC1_CA5P16_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NKD1_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NKD1_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NKD2_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NKD2_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t NLP14_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n NLP14_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t SBP15_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n SBP15_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t SBP1_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n SBP1_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t SBP2_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n SBP2_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t SBP30_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n SBP30_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t SBP32_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n SBP32_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t SBP6_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n SBP6_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t SBP8_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n SBP8_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t TCP11_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n TCP11_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t TCP15_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n TCP15_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t TCP2_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n TCP2_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t TCP30_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n TCP30_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t TCP3_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n TCP3_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t TCP4_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n TCP4_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t TCP5_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n TCP5_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t TCP8_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n TCP8_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t THX16_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n THX16_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t THX20_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n THX20_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t THX26_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n THX26_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t WRKY11_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n WRKY11_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t WRKY125_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n WRKY125_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t WRKY53_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n WRKY53_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t WRKY57_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n WRKY57_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t WRKY64_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n WRKY64_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t WRKY82_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n WRKY82_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t YAB2_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n YAB2_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ZHD15_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n ZHD15_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ZHD1_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n ZHD1_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ZHD21_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n ZHD21_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ZHD4_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n ZHD4_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ZHD5_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n ZHD5_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ZIM2_Mo17.PE.a.bam -c HALO-GST_Mo17.SE.a.bam -n ZIM2_Mo17.PE.a.MACS-2.1.0 -g 2134373047 -f BAMPE