/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-APETALA2a.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-APETALA2a.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-APETALA2a.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-APETALA2a.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-ARF4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-ARF4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-ARF4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-ARF4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-BES1_BZR1hp2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-BES1_BZR1hp2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-BES1_BZR1hp2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-BES1_BZR1hp2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-BHLH1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-BHLH1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-BHLH1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-BHLH1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-CBF2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-CBF2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-CBF2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-CBF2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-CIP2a.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-CIP2a.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-CIP2a.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-CIP2a.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-CNR.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-CNR.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-CNR.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-CNR.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-CZFP1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-CZFP1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-CZFP1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-CZFP1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-DREB3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-DREB3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-DREB3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-DREB3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-Dof4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-Dof4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-Dof4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-Dof4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-EIL1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-EIL1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-EIL1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-EIL1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-EIL2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-EIL2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-EIL2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-EIL2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-EIL3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-EIL3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-EIL3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-EIL3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-EIL4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-EIL4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-EIL4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-EIL4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-ERF10.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-ERF10.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-ERF10.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-ERF10.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-ERF9.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-ERF9.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-ERF9.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-ERF9.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-GRAS10.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-GRAS10.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-GRAS10.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-GRAS10.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-GRAS12.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-GRAS12.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-GRAS12.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-GRAS12.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-GRAS4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-GRAS4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-GRAS4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-GRAS4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-HALO.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-HALO.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-HALO.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-HALO.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-JERF1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-JERF1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-JERF1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-JERF1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-LAT61.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-LAT61.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-LAT61.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-LAT61.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-LES1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-LES1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-LES1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-LES1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-LOB1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-LOB1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-LOB1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-LOB1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-LOB38.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-LOB38.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-LOB38.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-LOB38.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-LOB42.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-LOB42.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-LOB42.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-LOB42.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-LSD1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-LSD1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-LSD1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-LSD1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-LeT12.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-LeT12.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-LeT12.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-LeT12.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-LeZIP2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-LeZIP2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-LeZIP2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-LeZIP2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-MADS-MC.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-MADS-MC.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-MADS-MC.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-MADS-MC.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-MADS-RIN.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-MADS-RIN.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-MADS-RIN.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-MADS-RIN.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-MADS1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-MADS1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-MADS1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-MADS1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-MBD5.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-MBD5.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-MBD5.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-MBD5.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-MBP7.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-MBP7.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-MBP7.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-MBP7.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-NAC-NOR.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-NAC-NOR.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-NAC-NOR.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-NAC-NOR.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-NAC6.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-NAC6.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-NAC6.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-NAC6.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-NF-YB-3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-NF-YB-3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-NF-YB-3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-NF-YB-3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-PTI4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-PTI4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-PTI4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-PTI4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SCL32-like.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SCL32-like.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SCL32-like.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SCL32-like.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SEPALLATA3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SEPALLATA3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SEPALLATA3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SEPALLATA3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-Sl-ERF_C_4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-Sl-ERF_C_4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-Sl-ERF_C_4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-Sl-ERF_C_4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-Sl-ERF_C_6.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-Sl-ERF_C_6.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-Sl-ERF_C_6.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-Sl-ERF_C_6.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-Sl-ERF_E_4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-Sl-ERF_E_4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-Sl-ERF_E_4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-Sl-ERF_E_4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-Sl-ERF_F_2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-Sl-ERF_F_2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-Sl-ERF_F_2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-Sl-ERF_F_2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-Sl-ERF_F_3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-Sl-ERF_F_3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-Sl-ERF_F_3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-Sl-ERF_F_3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-Sl-ERF_F_4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-Sl-ERF_F_4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-Sl-ERF_F_4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-Sl-ERF_F_4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-Sl-ERF_F_5.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-Sl-ERF_F_5.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-Sl-ERF_F_5.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-Sl-ERF_F_5.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlBEL1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlBEL1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlBEL1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlBEL1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlC3H11.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlC3H11.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlC3H11.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlC3H11.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlC3H48.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlC3H48.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlC3H48.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlC3H48.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlCOL1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlCOL1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlCOL1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlCOL1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlDRP1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlDRP1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlDRP1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlDRP1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlDof14.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlDof14.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlDof14.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlDof14.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlERF1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlERF1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlERF1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlERF1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlERF1a-1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlERF1a-1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlERF1a-1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlERF1a-1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlERF1a-2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlERF1a-2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlERF1a-2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlERF1a-2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlERF36.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlERF36.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlERF36.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlERF36.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlERF4-1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlERF4-1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlERF4-1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlERF4-1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlERF4-2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlERF4-2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlERF4-2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlERF4-2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlERF5.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlERF5.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlERF5.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlERF5.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlERF5-2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlERF5-2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlERF5-2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlERF5-2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlGABL2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlGABL2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlGABL2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlGABL2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlGABL4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlGABL4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlGABL4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlGABL4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlGATA9_1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlGATA9_1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlGATA9_1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlGATA9_1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlGATA9_2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlGATA9_2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlGATA9_2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlGATA9_2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlGRAS3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlGRAS3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlGRAS3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlGRAS3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlGT2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlGT2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlGT2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlGT2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlHB1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlHB1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlHB1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlHB1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlHZIP2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlHZIP2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlHZIP2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlHZIP2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlHZIP3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlHZIP3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlHZIP3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlHZIP3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlMADF1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlMADF1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlMADF1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlMADF1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlMYB44.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlMYB44.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlMYB44.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlMYB44.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlMYB70.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlMYB70.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlMYB70.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlMYB70.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlMYB91.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlMYB91.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlMYB91.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlMYB91.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlMYBL1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlMYBL1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlMYBL1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlMYBL1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlMYBL2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlMYBL2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlMYBL2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlMYBL2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlMYBL3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlMYBL3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlMYBL3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlMYBL3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlMYBL4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlMYBL4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlMYBL4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlMYBL4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlNAM1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlNAM1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlNAM1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlNAM1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlNAM2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlNAM2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlNAM2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlNAM2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlNAM3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlNAM3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlNAM3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlNAM3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlNAM4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlNAM4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlNAM4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlNAM4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlNAM5.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlNAM5.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlNAM5.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlNAM5.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlTCP12.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlTCP12.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlTCP12.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlTCP12.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlTCP15.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlTCP15.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlTCP15.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlTCP15.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlTCP18.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlTCP18.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlTCP18.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlTCP18.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlWOX14.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlWOX14.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlWOX14.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlWOX14.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlWRKY11.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlWRKY11.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlWRKY11.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlWRKY11.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlWRKY23.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlWRKY23.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlWRKY23.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlWRKY23.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlWRKY40.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlWRKY40.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlWRKY40.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlWRKY40.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlWRKY41.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlWRKY41.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlWRKY41.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlWRKY41.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlWRKY6.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlWRKY6.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlWRKY6.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlWRKY6.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlWRKY7.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlWRKY7.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlWRKY7.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlWRKY7.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlWRKY81.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlWRKY81.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlWRKY81.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlWRKY81.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlYABBY2a.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlYABBY2a.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlYABBY2a.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlYABBY2a.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZF1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZF1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZF1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZF1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZF2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZF2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZF2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZF2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZF3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZF3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZF3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZF3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZF6.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZF6.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZF6.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZF6.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZFCL3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZFCL3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZFCL3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZFCL3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZIP1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZIP1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZIP1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZIP1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZIP3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZIP3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZIP3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZIP3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZIP4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZIP4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZIP4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZIP4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZIP5.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZIP5.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZIP5.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZIP5.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZIP6.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZIP6.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZIP6.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZIP6.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZIP7.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZIP7.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlZIP7.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlZIP7.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlbHLH014.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlbHLH014.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlbHLH014.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlbHLH014.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlbHLH138.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlbHLH138.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlbHLH138.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlbHLH138.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlbHLH147.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlbHLH147.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SlbHLH147.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SlbHLH147.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SolycHsfA2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SolycHsfA2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SolycHsfA2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SolycHsfA2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SolycHsfA4a.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SolycHsfA4a.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SolycHsfA4a.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SolycHsfA4a.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SolycHsfA6b.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SolycHsfA6b.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SolycHsfA6b.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SolycHsfA6b.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SolycHsfA7.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SolycHsfA7.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SolycHsfA7.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SolycHsfA7.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SolycHsfB1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SolycHsfB1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SolycHsfB1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SolycHsfB1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SolycHsfB2a.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SolycHsfB2a.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SolycHsfB2a.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SolycHsfB2a.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SolycHsfB2b.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SolycHsfB2b.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SolycHsfB2b.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SolycHsfB2b.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SolycHsfC1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SolycHsfC1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-SolycHsfC1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-SolycHsfC1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-TDR4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-TDR4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-TDR4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-TDR4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-TM29.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-TM29.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-TM29.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-TM29.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-VAHOX1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-VAHOX1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-VAHOX1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-VAHOX1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-cip2b.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-cip2b.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-cip2b.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-cip2b.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-gras6.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-gras6.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Green-gras6.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Green-gras6.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Green-DAP_100_C.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Green-DAP_100_C.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Green-DAP_100_C.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Green-DAP_100_C.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Green-DAP_150_D.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Green-DAP_150_D.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Green-DAP_150_D.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Green-DAP_150_D.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Green-DAP_300_D.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Green-DAP_300_D.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Green-DAP_300_D.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Green-DAP_300_D.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Green-DAP_50_D.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Green-DAP_50_D.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Green-DAP_50_D.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Green-DAP_50_D.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Green-ampDAP_100_A.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Green-ampDAP_100_A.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Green-ampDAP_100_A.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Green-ampDAP_100_A.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Green-ampDAP_150_A.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Green-ampDAP_150_A.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Green-ampDAP_150_A.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Green-ampDAP_150_A.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Green-ampDAP_300_A.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Green-ampDAP_300_A.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Green-ampDAP_300_A.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Green-ampDAP_300_A.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Green-ampDAP_50_A.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Green-ampDAP_50_A.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Green-ampDAP_50_A.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Green-ampDAP_50_A.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Red-DAP_100_E.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Red-DAP_100_E.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Red-DAP_100_E.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Red-DAP_100_E.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Red-DAP_150_G.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Red-DAP_150_G.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Red-DAP_150_G.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Red-DAP_150_G.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Red-DAP_300_G.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Red-DAP_300_G.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Red-DAP_300_G.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Red-DAP_300_G.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Red-DAP_50_G.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Red-DAP_50_G.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig HALO-Red-DAP_50_G.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes HALO-Red-DAP_50_G.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Green-DAP_100_D.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Green-DAP_100_D.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Green-DAP_100_D.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Green-DAP_100_D.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Green-DAP_150_E.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Green-DAP_150_E.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Green-DAP_150_E.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Green-DAP_150_E.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Green-DAP_300_E.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Green-DAP_300_E.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Green-DAP_300_E.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Green-DAP_300_E.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Green-DAP_50_E.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Green-DAP_50_E.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Green-DAP_50_E.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Green-DAP_50_E.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Green-ampDAP_100_B.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Green-ampDAP_100_B.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Green-ampDAP_100_B.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Green-ampDAP_100_B.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Green-ampDAP_150_B.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Green-ampDAP_150_B.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Green-ampDAP_150_B.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Green-ampDAP_150_B.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Green-ampDAP_300_B.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Green-ampDAP_300_B.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Green-ampDAP_300_B.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Green-ampDAP_300_B.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Green-ampDAP_50_B.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Green-ampDAP_50_B.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Green-ampDAP_50_B.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Green-ampDAP_50_B.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Red-DAP_100_F.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Red-DAP_100_F.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Red-DAP_100_F.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Red-DAP_100_F.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Red-DAP_150_H.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Red-DAP_150_H.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Red-DAP_150_H.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Red-DAP_150_H.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Red-DAP_300_H.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Red-DAP_300_H.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Red-DAP_300_H.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Red-DAP_300_H.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Red-DAP_50_H.end2.fastq.gz.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Red-DAP_50_H.end2.fastq.gz.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig MBD5-Red-DAP_50_H.end2.fastq.gz.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes MBD5-Red-DAP_50_H.end2.fastq.gz.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-APETALA2a.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-APETALA2a.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-APETALA2a.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-APETALA2a.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-ARF4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-ARF4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-ARF4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-ARF4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-BES1_BZR1hp2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-BES1_BZR1hp2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-BES1_BZR1hp2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-BES1_BZR1hp2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-BHLH1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-BHLH1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-BHLH1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-BHLH1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-CBF2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-CBF2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-CBF2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-CBF2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-CIP2a.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-CIP2a.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-CIP2a.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-CIP2a.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-CNR.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-CNR.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-CNR.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-CNR.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-CZFP1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-CZFP1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-CZFP1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-CZFP1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-DREB3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-DREB3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-DREB3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-DREB3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-Dof4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-Dof4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-Dof4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-Dof4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-EIL1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-EIL1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-EIL1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-EIL1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-EIL2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-EIL2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-EIL2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-EIL2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-EIL3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-EIL3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-EIL3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-EIL3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-EIL4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-EIL4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-EIL4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-EIL4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-ERF10.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-ERF10.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-ERF10.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-ERF10.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-ERF9.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-ERF9.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-ERF9.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-ERF9.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-GRAS10.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-GRAS10.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-GRAS10.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-GRAS10.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-GRAS12.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-GRAS12.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-GRAS12.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-GRAS12.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-GRAS4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-GRAS4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-GRAS4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-GRAS4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-HALO.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-HALO.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-HALO.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-HALO.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-JERF1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-JERF1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-JERF1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-JERF1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-LAT61.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-LAT61.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-LAT61.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-LAT61.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-LES1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-LES1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-LES1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-LES1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-LOB1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-LOB1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-LOB1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-LOB1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-LOB38.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-LOB38.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-LOB38.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-LOB38.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-LOB42.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-LOB42.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-LOB42.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-LOB42.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-LSD1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-LSD1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-LSD1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-LSD1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-LeT12.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-LeT12.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-LeT12.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-LeT12.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-LeZIP2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-LeZIP2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-LeZIP2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-LeZIP2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-MADS-MC.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-MADS-MC.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-MADS-MC.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-MADS-MC.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-MADS-RIN.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-MADS-RIN.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-MADS-RIN.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-MADS-RIN.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-MADS1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-MADS1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-MADS1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-MADS1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-MBD5.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-MBD5.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-MBD5.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-MBD5.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-MBP7.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-MBP7.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-MBP7.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-MBP7.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-NAC-NOR.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-NAC-NOR.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-NAC-NOR.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-NAC-NOR.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-NAC6.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-NAC6.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-NAC6.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-NAC6.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-NF-YB-3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-NF-YB-3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-NF-YB-3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-NF-YB-3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-PTI4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-PTI4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-PTI4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-PTI4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SCL32-like.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SCL32-like.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SCL32-like.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SCL32-like.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SEPALLATA3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SEPALLATA3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SEPALLATA3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SEPALLATA3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-Sl-ERF_C_4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-Sl-ERF_C_4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-Sl-ERF_C_4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-Sl-ERF_C_4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-Sl-ERF_C_6.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-Sl-ERF_C_6.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-Sl-ERF_C_6.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-Sl-ERF_C_6.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-Sl-ERF_E_4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-Sl-ERF_E_4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-Sl-ERF_E_4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-Sl-ERF_E_4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-Sl-ERF_F_2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-Sl-ERF_F_2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-Sl-ERF_F_2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-Sl-ERF_F_2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-Sl-ERF_F_3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-Sl-ERF_F_3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-Sl-ERF_F_3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-Sl-ERF_F_3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-Sl-ERF_F_4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-Sl-ERF_F_4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-Sl-ERF_F_4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-Sl-ERF_F_4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-Sl-ERF_F_5.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-Sl-ERF_F_5.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-Sl-ERF_F_5.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-Sl-ERF_F_5.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlBEL1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlBEL1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlBEL1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlBEL1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlC3H11.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlC3H11.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlC3H11.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlC3H11.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlC3H48.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlC3H48.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlC3H48.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlC3H48.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlCOL1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlCOL1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlCOL1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlCOL1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlDRP1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlDRP1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlDRP1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlDRP1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlDof14.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlDof14.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlDof14.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlDof14.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlERF1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlERF1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlERF1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlERF1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlERF1a-1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlERF1a-1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlERF1a-1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlERF1a-1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlERF1a-2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlERF1a-2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlERF1a-2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlERF1a-2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlERF36.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlERF36.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlERF36.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlERF36.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlERF4-1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlERF4-1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlERF4-1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlERF4-1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlERF4-2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlERF4-2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlERF4-2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlERF4-2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlERF5.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlERF5.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlERF5.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlERF5.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlGABL2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlGABL2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlGABL2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlGABL2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlGABL4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlGABL4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlGABL4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlGABL4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlGATA9_1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlGATA9_1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlGATA9_1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlGATA9_1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlGATA9_2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlGATA9_2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlGATA9_2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlGATA9_2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlGRAS3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlGRAS3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlGRAS3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlGRAS3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlGT2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlGT2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlGT2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlGT2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlHB1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlHB1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlHB1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlHB1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlHZIP2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlHZIP2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlHZIP2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlHZIP2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlHZIP3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlHZIP3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlHZIP3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlHZIP3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlMADF1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlMADF1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlMADF1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlMADF1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlMYB44.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlMYB44.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlMYB44.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlMYB44.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlMYB70.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlMYB70.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlMYB70.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlMYB70.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlMYB91.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlMYB91.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlMYB91.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlMYB91.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlMYBL1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlMYBL1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlMYBL1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlMYBL1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlMYBL2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlMYBL2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlMYBL2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlMYBL2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlMYBL3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlMYBL3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlMYBL3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlMYBL3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlMYBL4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlMYBL4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlMYBL4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlMYBL4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlNAM1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlNAM1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlNAM1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlNAM1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlNAM2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlNAM2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlNAM2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlNAM2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlNAM3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlNAM3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlNAM3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlNAM3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlNAM4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlNAM4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlNAM4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlNAM4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlNAM5.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlNAM5.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlNAM5.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlNAM5.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlTCP12.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlTCP12.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlTCP12.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlTCP12.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlTCP15.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlTCP15.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlTCP15.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlTCP15.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlTCP18.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlTCP18.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlTCP18.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlTCP18.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlWOX14.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlWOX14.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlWOX14.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlWOX14.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlWRKY11.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlWRKY11.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlWRKY11.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlWRKY11.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlWRKY23.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlWRKY23.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlWRKY23.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlWRKY23.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlWRKY40.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlWRKY40.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlWRKY40.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlWRKY40.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlWRKY41.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlWRKY41.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlWRKY41.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlWRKY41.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlWRKY6.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlWRKY6.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlWRKY6.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlWRKY6.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlWRKY7.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlWRKY7.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlWRKY7.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlWRKY7.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlWRKY81.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlWRKY81.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlWRKY81.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlWRKY81.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlYABBY2a.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlYABBY2a.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlYABBY2a.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlYABBY2a.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZF1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZF1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZF1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZF1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZF2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZF2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZF2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZF2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZF3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZF3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZF3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZF3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZF6.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZF6.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZF6.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZF6.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZFCL3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZFCL3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZFCL3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZFCL3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZIP1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZIP1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZIP1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZIP1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZIP3.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZIP3.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZIP3.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZIP3.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZIP5.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZIP5.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZIP5.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZIP5.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZIP6.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZIP6.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZIP6.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZIP6.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZIP7.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZIP7.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlZIP7.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlZIP7.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlbHLH014.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlbHLH014.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlbHLH014.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlbHLH014.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlbHLH138.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlbHLH138.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlbHLH138.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlbHLH138.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlbHLH147.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlbHLH147.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SlbHLH147.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SlbHLH147.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SolycHsfA2.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SolycHsfA2.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SolycHsfA2.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SolycHsfA2.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SolycHsfA4a.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SolycHsfA4a.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SolycHsfA4a.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SolycHsfA4a.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SolycHsfA6b.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SolycHsfA6b.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SolycHsfA6b.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SolycHsfA6b.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SolycHsfA7.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SolycHsfA7.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SolycHsfA7.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SolycHsfA7.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SolycHsfB1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SolycHsfB1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SolycHsfB1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SolycHsfB1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SolycHsfB2a.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SolycHsfB2a.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SolycHsfB2a.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SolycHsfB2a.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SolycHsfB2b.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SolycHsfB2b.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SolycHsfB2b.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SolycHsfB2b.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SolycHsfC1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SolycHsfC1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-SolycHsfC1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-SolycHsfC1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-TDR4.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-TDR4.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-TDR4.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-TDR4.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-TM29.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-TM29.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-TM29.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-TM29.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-VAHOX1.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-VAHOX1.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-VAHOX1.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-VAHOX1.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-cip2b.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-cip2b.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-cip2b.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-cip2b.PE.a.5p.counts.minus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-gras6.PE.a.5p.counts.plus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-gras6.PE.a.5p.counts.plus.bigWig
/oak/stanford/groups/akundaje/marinovg/programs/UCSC-utils-2017-07-13/wigToBigWig Red-gras6.PE.a.5p.counts.minus.wig /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Solanum_lycopersicum/Solanum_lycopersicum.SL2.40.19.chrom.sizes Red-gras6.PE.a.5p.counts.minus.bigWig