Rscript ~/code/spp/spp_package/run_spp.R -c=NAC61_rep1.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=NAC61_rep1.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=NAC61_rep2.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=NAC61_rep2.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=halo_nac_r1.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=halo_nac_r1.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=halo_nac_r2.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=halo_nac_r2.1x36mers.QC