SPL1D_rep2	SPL1D_rep2.end1.fastq.gz	SPL1D_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL2B	SPL2B.end1.fastq.gz	SPL2B.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL3A	SPL3A.end1.fastq.gz	SPL3A.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL4A	SPL4A.end1.fastq.gz	SPL4A.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL7A	SPL7A.end1.fastq.gz	SPL7A.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL7B	SPL7B.end1.fastq.gz	SPL7B.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL8D1	SPL8D1.end1.fastq.gz	SPL8D1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL9A_rep2	SPL9A_rep2.end1.fastq.gz	SPL9A_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL13B	SPL13B.end1.fastq.gz	SPL13B.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL1D_rep1	SPL1D_rep1.end1.fastq.gz	SPL1D_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL2A_rep1	SPL2A_rep1.end1.fastq.gz	SPL2A_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL2D	SPL2D.end1.fastq.gz	SPL2D.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL3D	SPL3D.end1.fastq.gz	SPL3D.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL4D	SPL4D.end1.fastq.gz	SPL4D.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL5A	SPL5A.end1.fastq.gz	SPL5A.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL5D	SPL5D.end1.fastq.gz	SPL5D.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL8A_rep1	SPL8A_rep1.end1.fastq.gz	SPL8A_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL8B	SPL8B.end1.fastq.gz	SPL8B.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL9A_rep1	SPL9A_rep1.end1.fastq.gz	SPL9A_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL9B	SPL9B.end1.fastq.gz	SPL9B.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL11A	SPL11A.end1.fastq.gz	SPL11A.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL11B	SPL11B.end1.fastq.gz	SPL11B.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL12B	SPL12B.end1.fastq.gz	SPL12B.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL13A	SPL13A.end1.fastq.gz	SPL13A.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL13D	SPL13D.end1.fastq.gz	SPL13D.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL14B	SPL14B.end1.fastq.gz	SPL14B.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL19B_rep1	SPL19B_rep1.end1.fastq.gz	SPL19B_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
Ta-input2	Ta-input2.end1.fastq.gz	Ta-input2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL2A_rep2	SPL2A_rep2.end1.fastq.gz	SPL2A_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL3B	SPL3B.end1.fastq.gz	SPL3B.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL4B	SPL4B.end1.fastq.gz	SPL4B.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL5B	SPL5B.end1.fastq.gz	SPL5B.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL6A_rep1	SPL6A_rep1.end1.fastq.gz	SPL6A_rep1.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL6A_rep2	SPL6A_rep2.end1.fastq.gz	SPL6A_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL6B	SPL6B.end1.fastq.gz	SPL6B.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL6D	SPL6D.end1.fastq.gz	SPL6D.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL7D	SPL7D.end1.fastq.gz	SPL7D.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL8A_rep2	SPL8A_rep2.end1.fastq.gz	SPL8A_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL9D	SPL9D.end1.fastq.gz	SPL9D.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL15A	SPL15A.end1.fastq.gz	SPL15A.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL15B	SPL15B.end1.fastq.gz	SPL15B.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL15D	SPL15D.end1.fastq.gz	SPL15D.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL16A	SPL16A.end1.fastq.gz	SPL16A.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL16D	SPL16D.end1.fastq.gz	SPL16D.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL18A	SPL18A.end1.fastq.gz	SPL18A.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL18D2	SPL18D2.end1.fastq.gz	SPL18D2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
SPL19B_rep2	SPL19B_rep2.end1.fastq.gz	SPL19B_rep2.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes
Ta-input	Ta-input.end1.fastq.gz	Ta-input.end2.fastq.gz	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/bowtie-indexes/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1	/oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1/Triticum_aestivum-IWGSC_CS_RefSeq_v2.1.chrom.sizes