python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py AP2-14.1x36mers.unique.bam SAMstats-AP2-14.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py AP2-15.1x36mers.unique.bam SAMstats-AP2-15.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py AP2-DREB-1.1x36mers.unique.bam SAMstats-AP2-DREB-1.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py AP2-DREB-18.1x36mers.unique.bam SAMstats-AP2-DREB-18.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py AP2-DREB-19.1x36mers.unique.bam SAMstats-AP2-DREB-19.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py AP2-DREB-21.1x36mers.unique.bam SAMstats-AP2-DREB-21.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py AP2-DREB-7.1x36mers.unique.bam SAMstats-AP2-DREB-7.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py AP2-DREB-8.1x36mers.unique.bam SAMstats-AP2-DREB-8.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py AP2-DREB-9.1x36mers.unique.bam SAMstats-AP2-DREB-9.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py AP2-ERF-13.1x36mers.unique.bam SAMstats-AP2-ERF-13.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py AP2-ERF-23.1x36mers.unique.bam SAMstats-AP2-ERF-23.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py AP2-RAV-26.1x36mers.unique.bam SAMstats-AP2-RAV-26.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py B3-10.1x36mers.unique.bam SAMstats-B3-10.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py C2C2-1.1x36mers.unique.bam SAMstats-C2C2-1.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py C2C2-2.1x36mers.unique.bam SAMstats-C2C2-2.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py C2C2-3.1x36mers.unique.bam SAMstats-C2C2-3.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py C2C2-4.1x36mers.unique.bam SAMstats-C2C2-4.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py C2C2-5.1x36mers.unique.bam SAMstats-C2C2-5.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py C2H2-4.1x36mers.unique.bam SAMstats-C2H2-4.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py C3H-1.1x36mers.unique.bam SAMstats-C3H-1.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py C3H-2.1x36mers.unique.bam SAMstats-C3H-2.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py C3H-5.1x36mers.unique.bam SAMstats-C3H-5.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py GARP-G2-1.1x36mers.unique.bam SAMstats-GARP-G2-1.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py GARP2.1x36mers.unique.bam SAMstats-GARP2.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py GARP5.1x36mers.unique.bam SAMstats-GARP5.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py GARP6.1x36mers.unique.bam SAMstats-GARP6.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py GRAS2.1x36mers.unique.bam SAMstats-GRAS2.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py HB-HD-ZIP-2.1x36mers.unique.bam SAMstats-HB-HD-ZIP-2.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py HB-HD-ZIP-3.1x36mers.unique.bam SAMstats-HB-HD-ZIP-3.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py HB-HD-ZIP-6.1x36mers.unique.bam SAMstats-HB-HD-ZIP-6.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py HSF1.1x36mers.unique.bam SAMstats-HSF1.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Halo_rep1.1x36mers.unique.bam SAMstats-Halo_rep1.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Halo_rep2.1x36mers.unique.bam SAMstats-Halo_rep2.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Halo_rep3.1x36mers.unique.bam SAMstats-Halo_rep3.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py LOB2.1x36mers.unique.bam SAMstats-LOB2.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py LOB3.1x36mers.unique.bam SAMstats-LOB3.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py LOB5.1x36mers.unique.bam SAMstats-LOB5.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB11.1x36mers.unique.bam SAMstats-MYB11.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB12.1x36mers.unique.bam SAMstats-MYB12.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB13.1x36mers.unique.bam SAMstats-MYB13.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB14.1x36mers.unique.bam SAMstats-MYB14.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB15.1x36mers.unique.bam SAMstats-MYB15.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB16.1x36mers.unique.bam SAMstats-MYB16.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB17.1x36mers.unique.bam SAMstats-MYB17.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB18.1x36mers.unique.bam SAMstats-MYB18.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB19.1x36mers.unique.bam SAMstats-MYB19.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB2.1x36mers.unique.bam SAMstats-MYB2.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB20.1x36mers.unique.bam SAMstats-MYB20.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB21.1x36mers.unique.bam SAMstats-MYB21.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB22.1x36mers.unique.bam SAMstats-MYB22.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB23.1x36mers.unique.bam SAMstats-MYB23.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB24.1x36mers.unique.bam SAMstats-MYB24.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB26.1x36mers.unique.bam SAMstats-MYB26.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB27.1x36mers.unique.bam SAMstats-MYB27.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB30.1x36mers.unique.bam SAMstats-MYB30.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB31.1x36mers.unique.bam SAMstats-MYB31.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB32.1x36mers.unique.bam SAMstats-MYB32.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB33.1x36mers.unique.bam SAMstats-MYB33.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB34.1x36mers.unique.bam SAMstats-MYB34.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB36.1x36mers.unique.bam SAMstats-MYB36.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py MYB6.1x36mers.unique.bam SAMstats-MYB6.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC1.1x36mers.unique.bam SAMstats-NAC1.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC10.1x36mers.unique.bam SAMstats-NAC10.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC11.1x36mers.unique.bam SAMstats-NAC11.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC12.1x36mers.unique.bam SAMstats-NAC12.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC13.1x36mers.unique.bam SAMstats-NAC13.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC14.1x36mers.unique.bam SAMstats-NAC14.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC15.1x36mers.unique.bam SAMstats-NAC15.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC17.1x36mers.unique.bam SAMstats-NAC17.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC18.1x36mers.unique.bam SAMstats-NAC18.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC2.1x36mers.unique.bam SAMstats-NAC2.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC22.1x36mers.unique.bam SAMstats-NAC22.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC23.1x36mers.unique.bam SAMstats-NAC23.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC24.1x36mers.unique.bam SAMstats-NAC24.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC26.1x36mers.unique.bam SAMstats-NAC26.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC27.1x36mers.unique.bam SAMstats-NAC27.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC29.1x36mers.unique.bam SAMstats-NAC29.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC4.1x36mers.unique.bam SAMstats-NAC4.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC8.1x36mers.unique.bam SAMstats-NAC8.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NAC9.1x36mers.unique.bam SAMstats-NAC9.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py NF-YC-1.1x36mers.unique.bam SAMstats-NF-YC-1.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py SBP3.1x36mers.unique.bam SAMstats-SBP3.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py Trihelix1.1x36mers.unique.bam SAMstats-Trihelix1.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py WRKY10.1x36mers.unique.bam SAMstats-WRKY10.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py WRKY11.1x36mers.unique.bam SAMstats-WRKY11.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py WRKY12.1x36mers.unique.bam SAMstats-WRKY12.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py WRKY13.1x36mers.unique.bam SAMstats-WRKY13.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py WRKY14.1x36mers.unique.bam SAMstats-WRKY14.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py WRKY15.1x36mers.unique.bam SAMstats-WRKY15.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py WRKY16.1x36mers.unique.bam SAMstats-WRKY16.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py WRKY18.1x36mers.unique.bam SAMstats-WRKY18.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py WRKY19.1x36mers.unique.bam SAMstats-WRKY19.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py WRKY20.1x36mers.unique.bam SAMstats-WRKY20.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py WRKY21.1x36mers.unique.bam SAMstats-WRKY21.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py WRKY30.1x36mers.unique.bam SAMstats-WRKY30.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py WRKY5.1x36mers.unique.bam SAMstats-WRKY5.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py WRKY8.1x36mers.unique.bam SAMstats-WRKY8.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py ZFHD1.1x36mers.unique.bam SAMstats-ZFHD1.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py ZFHD2.1x36mers.unique.bam SAMstats-ZFHD2.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bHLH10.1x36mers.unique.bam SAMstats-bHLH10.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bHLH11.1x36mers.unique.bam SAMstats-bHLH11.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bHLH12.1x36mers.unique.bam SAMstats-bHLH12.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bHLH13.1x36mers.unique.bam SAMstats-bHLH13.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bHLH14.1x36mers.unique.bam SAMstats-bHLH14.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bHLH16.1x36mers.unique.bam SAMstats-bHLH16.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bHLH2.1x36mers.unique.bam SAMstats-bHLH2.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bHLH5.1x36mers.unique.bam SAMstats-bHLH5.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bHLH7.1x36mers.unique.bam SAMstats-bHLH7.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bZIP1.1x36mers.unique.bam SAMstats-bZIP1.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bZIP10.1x36mers.unique.bam SAMstats-bZIP10.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bZIP11.1x36mers.unique.bam SAMstats-bZIP11.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bZIP17.1x36mers.unique.bam SAMstats-bZIP17.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bZIP2.1x36mers.unique.bam SAMstats-bZIP2.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bZIP20.1x36mers.unique.bam SAMstats-bZIP20.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bZIP3.1x36mers.unique.bam SAMstats-bZIP3.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bZIP4.1x36mers.unique.bam SAMstats-bZIP4.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bZIP5.1x36mers.unique.bam SAMstats-bZIP5.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bZIP7.1x36mers.unique.bam SAMstats-bZIP7.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired
python /oak/stanford/groups/akundaje/marinovg/code/SAMstats.py bZIP8.1x36mers.unique.bam SAMstats-bZIP8.1x36mers.unique -bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Triticum_urartu-Tu2.1/Triticum_urartu-Tu2.1.chrom.sizes /oak/stanford/groups/akundaje/marinovg/programs/samtools-0.1.18/samtools -paired