Rscript ~/code/spp/spp_package/run_spp.R -c=ARF10.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=ARF10.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=ARF14.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=ARF14.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=ARF16.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=ARF16.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=ARF18.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=ARF18.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=ARF25.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=ARF25.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=ARF27.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=ARF27.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=ARF29.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=ARF29.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=ARF34.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=ARF34.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=ARF36.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=ARF36.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=ARF39.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=ARF39.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=ARF4.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=ARF4.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=ARF7.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=ARF7.1x36mers.QC
Rscript ~/code/spp/spp_package/run_spp.R -c=negative_control_GST-HALO.1x36mers.unique.bam -p=20 -savp -rf -s=-0:2:400 -out=negative_control_GST-HALO.1x36mers.QC