/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ARF10.SE.a.bam -c negative_control_GST-HALO.SE.a.bam -n ARF10.SE.a.MACS-2.1.0 -g 973344380 -f BAM
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ARF14.SE.a.bam -c negative_control_GST-HALO.SE.a.bam -n ARF14.SE.a.MACS-2.1.0 -g 973344380 -f BAM
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ARF16.SE.a.bam -c negative_control_GST-HALO.SE.a.bam -n ARF16.SE.a.MACS-2.1.0 -g 973344380 -f BAM
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ARF18.SE.a.bam -c negative_control_GST-HALO.SE.a.bam -n ARF18.SE.a.MACS-2.1.0 -g 973344380 -f BAM
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ARF25.SE.a.bam -c negative_control_GST-HALO.SE.a.bam -n ARF25.SE.a.MACS-2.1.0 -g 973344380 -f BAM
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ARF27.SE.a.bam -c negative_control_GST-HALO.SE.a.bam -n ARF27.SE.a.MACS-2.1.0 -g 973344380 -f BAM
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ARF29.SE.a.bam -c negative_control_GST-HALO.SE.a.bam -n ARF29.SE.a.MACS-2.1.0 -g 973344380 -f BAM
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ARF34.SE.a.bam -c negative_control_GST-HALO.SE.a.bam -n ARF34.SE.a.MACS-2.1.0 -g 973344380 -f BAM
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ARF36.SE.a.bam -c negative_control_GST-HALO.SE.a.bam -n ARF36.SE.a.MACS-2.1.0 -g 973344380 -f BAM
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ARF39.SE.a.bam -c negative_control_GST-HALO.SE.a.bam -n ARF39.SE.a.MACS-2.1.0 -g 973344380 -f BAM
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ARF4.SE.a.bam -c negative_control_GST-HALO.SE.a.bam -n ARF4.SE.a.MACS-2.1.0 -g 973344380 -f BAM
/oak/stanford/groups/akundaje/marinovg/programs/MACS-2.1.0/bin/macs2 callpeak -t ARF7.SE.a.bam -c negative_control_GST-HALO.SE.a.bam -n ARF7.SE.a.MACS-2.1.0 -g 973344380 -f BAM