python ~/code/bedRPKMfromBAM.py C3H23.PE.a.MACS-2.1.0_peaks.narrowPeak.gz 0 C3H23.PE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Zea_mays-B73_RefGen_v4/GCA_000005005.6_B73_RefGen_v4_genomic.chrom.sizes C3H23.PE.a.MACS-2.1.0_peaks.RPM -RPM
python ~/code/bedRPKMfromBAM.py CPP2.PE.a.MACS-2.1.0_peaks.narrowPeak.gz 0 CPP2.PE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Zea_mays-B73_RefGen_v4/GCA_000005005.6_B73_RefGen_v4_genomic.chrom.sizes CPP2.PE.a.MACS-2.1.0_peaks.RPM -RPM
python ~/code/bedRPKMfromBAM.py OBF4.PE.a.MACS-2.1.0_peaks.narrowPeak.gz 0 OBF4.PE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Zea_mays-B73_RefGen_v4/GCA_000005005.6_B73_RefGen_v4_genomic.chrom.sizes OBF4.PE.a.MACS-2.1.0_peaks.RPM -RPM
python ~/code/bedRPKMfromBAM.py THX20.PE.a.MACS-2.1.0_peaks.narrowPeak.gz 0 THX20.PE.a.bam /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Zea_mays-B73_RefGen_v4/GCA_000005005.6_B73_RefGen_v4_genomic.chrom.sizes THX20.PE.a.MACS-2.1.0_peaks.RPM -RPM