## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[mouse_chipseq-ChIP_G1E_GATA1-rep2_R1.2x36mers.mm10.unique.bam] OUTPUT=mouse_chipseq-ChIP_G1E_GATA1-rep2_R1.2x36mers.mm10.unique.dedup.bam METRICS_FILE=mouse_chipseq-ChIP_G1E_GATA1-rep2_R1.2x36mers.mm10.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Jul 17 23:59:24 PDT 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	15924417	26915960	0	1196386	368578	0.075129	140926950

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.022381
2.0	1.935523
3.0	2.751099
4.0	3.479532
5.0	4.130135
6.0	4.711222
7.0	5.230222
8.0	5.693768
9.0	6.107786
10.0	6.477566
11.0	6.807837
12.0	7.102819
13.0	7.366283
14.0	7.601597
15.0	7.811768
16.0	7.999483
17.0	8.167141
18.0	8.316886
19.0	8.45063
20.0	8.570084
21.0	8.676775
22.0	8.772067
23.0	8.857176
24.0	8.933192
25.0	9.001086
26.0	9.061726
27.0	9.115886
28.0	9.16426
29.0	9.207465
30.0	9.246053
31.0	9.280519
32.0	9.311302
33.0	9.338796
34.0	9.363352
35.0	9.385284
36.0	9.404873
37.0	9.422369
38.0	9.437996
39.0	9.451953
40.0	9.464419
41.0	9.475552
42.0	9.485496
43.0	9.494378
44.0	9.502311
45.0	9.509396
46.0	9.515724
47.0	9.521376
48.0	9.526424
49.0	9.530933
50.0	9.53496
51.0	9.538556
52.0	9.541769
53.0	9.544638
54.0	9.5472
55.0	9.549489
56.0	9.551533
57.0	9.553359
58.0	9.55499
59.0	9.556446
60.0	9.557747
61.0	9.558909
62.0	9.559947
63.0	9.560874
64.0	9.561701
65.0	9.562441
66.0	9.563101
67.0	9.563691
68.0	9.564218
69.0	9.564688
70.0	9.565108
71.0	9.565484
72.0	9.565819
73.0	9.566118
74.0	9.566386
75.0	9.566625
76.0	9.566838
77.0	9.567029
78.0	9.567199
79.0	9.567351
80.0	9.567486
81.0	9.567608
82.0	9.567716
83.0	9.567813
84.0	9.567899
85.0	9.567976
86.0	9.568045
87.0	9.568107
88.0	9.568162
89.0	9.568211
90.0	9.568255
91.0	9.568294
92.0	9.568329
93.0	9.56836
94.0	9.568388
95.0	9.568413
96.0	9.568435
97.0	9.568455
98.0	9.568473
99.0	9.568489
100.0	9.568503