## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[mouse_chipseq-ChIP_G1E_307H-rep1_R1.2x36mers.mm10.unique.bam] OUTPUT=mouse_chipseq-ChIP_G1E_307H-rep1_R1.2x36mers.mm10.unique.dedup.bam METRICS_FILE=mouse_chipseq-ChIP_G1E_307H-rep1_R1.2x36mers.mm10.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Jul 17 23:59:25 PDT 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	15829112	27252932	0	1362101	378080	0.08605	116098584

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.02284
2.0	1.915313
3.0	2.694036
4.0	3.373505
5.0	3.966373
6.0	4.483676
7.0	4.935045
8.0	5.328885
9.0	5.672528
10.0	5.972371
11.0	6.233998
12.0	6.462279
13.0	6.661464
14.0	6.835262
15.0	6.986908
16.0	7.119226
17.0	7.23468
18.0	7.335418
19.0	7.423316
20.0	7.500012
21.0	7.566932
22.0	7.625322
23.0	7.676271
24.0	7.720726
25.0	7.759514
26.0	7.793359
27.0	7.822891
28.0	7.848658
29.0	7.871141
30.0	7.890758
31.0	7.907875
32.0	7.922811
33.0	7.935843
34.0	7.947214
35.0	7.957135
36.0	7.965792
37.0	7.973346
38.0	7.979937
39.0	7.985687
40.0	7.990705
41.0	7.995084
42.0	7.998904
43.0	8.002237
44.0	8.005146
45.0	8.007683
46.0	8.009898
47.0	8.01183
48.0	8.013516
49.0	8.014987
50.0	8.01627
51.0	8.01739
52.0	8.018367
53.0	8.01922
54.0	8.019964
55.0	8.020613
56.0	8.021179
57.0	8.021674
58.0	8.022105
59.0	8.022481
60.0	8.022809
61.0	8.023096
62.0	8.023346
63.0	8.023564
64.0	8.023754
65.0	8.02392
66.0	8.024065
67.0	8.024191
68.0	8.024302
69.0	8.024398
70.0	8.024482
71.0	8.024555
72.0	8.024619
73.0	8.024675
74.0	8.024724
75.0	8.024766
76.0	8.024803
77.0	8.024835
78.0	8.024864
79.0	8.024888
80.0	8.02491
81.0	8.024928
82.0	8.024945
83.0	8.024959
84.0	8.024972
85.0	8.024982
86.0	8.024992
87.0	8.025
88.0	8.025007
89.0	8.025014
90.0	8.025019
91.0	8.025024
92.0	8.025028
93.0	8.025032
94.0	8.025035
95.0	8.025038
96.0	8.02504
97.0	8.025042
98.0	8.025044
99.0	8.025046
100.0	8.025047