## net.sf.picard.metrics.StringHeader
# net.sf.picard.sam.MarkDuplicates INPUT=[mouse_chipseq-ChIP_G1E_307C-rep1_R1.2x36mers.mm10.unique.bam] OUTPUT=mouse_chipseq-ChIP_G1E_307C-rep1_R1.2x36mers.mm10.unique.dedup.bam METRICS_FILE=mouse_chipseq-ChIP_G1E_307C-rep1_R1.2x36mers.mm10.unique.dedup.metrics REMOVE_DUPLICATES=true ASSUME_SORTED=true VALIDATION_STRINGENCY=LENIENT    PROGRAM_RECORD_ID=MarkDuplicates PROGRAM_GROUP_NAME=MarkDuplicates MAX_SEQUENCES_FOR_DISK_READ_ENDS_MAP=50000 MAX_FILE_HANDLES_FOR_READ_ENDS_MAP=8000 SORTING_COLLECTION_SIZE_RATIO=0.25 READ_NAME_REGEX=[a-zA-Z0-9]+:[0-9]:([0-9]+):([0-9]+):([0-9]+).* OPTICAL_DUPLICATE_PIXEL_DISTANCE=100 VERBOSITY=INFO QUIET=false COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
## net.sf.picard.metrics.StringHeader
# Started on: Fri Jul 17 23:59:25 PDT 2020

## METRICS CLASS	net.sf.picard.sam.DuplicationMetrics
LIBRARY	UNPAIRED_READS_EXAMINED	READ_PAIRS_EXAMINED	UNMAPPED_READS	UNPAIRED_READ_DUPLICATES	READ_PAIR_DUPLICATES	READ_PAIR_OPTICAL_DUPLICATES	PERCENT_DUPLICATION	ESTIMATED_LIBRARY_SIZE
Unknown Library	0	17462875	34547310	0	1589168	511442	0.091003	127601135

## HISTOGRAM	java.lang.Double
BIN	VALUE
1.0	1.028155
2.0	1.924805
3.0	2.706771
4.0	3.38872
5.0	3.983446
6.0	4.502104
7.0	4.954424
8.0	5.348891
9.0	5.692904
10.0	5.992917
11.0	6.254557
12.0	6.482732
13.0	6.681723
14.0	6.855262
15.0	7.006605
16.0	7.138591
17.0	7.253695
18.0	7.354077
19.0	7.44162
20.0	7.517966
21.0	7.584547
22.0	7.642612
23.0	7.69325
24.0	7.737411
25.0	7.775924
26.0	7.809511
27.0	7.838803
28.0	7.864347
29.0	7.886625
30.0	7.906053
31.0	7.922996
32.0	7.937772
33.0	7.950658
34.0	7.961896
35.0	7.971697
36.0	7.980244
37.0	7.987698
38.0	7.994198
39.0	7.999868
40.0	8.004812
41.0	8.009123
42.0	8.012883
43.0	8.016163
44.0	8.019022
45.0	8.021516
46.0	8.023691
47.0	8.025588
48.0	8.027242
49.0	8.028685
50.0	8.029943
51.0	8.03104
52.0	8.031997
53.0	8.032832
54.0	8.033559
55.0	8.034194
56.0	8.034748
57.0	8.03523
58.0	8.035651
59.0	8.036018
60.0	8.036339
61.0	8.036618
62.0	8.036861
63.0	8.037074
64.0	8.037259
65.0	8.03742
66.0	8.037561
67.0	8.037684
68.0	8.037791
69.0	8.037885
70.0	8.037966
71.0	8.038037
72.0	8.038099
73.0	8.038153
74.0	8.0382
75.0	8.038241
76.0	8.038277
77.0	8.038308
78.0	8.038336
79.0	8.038359
80.0	8.03838
81.0	8.038398
82.0	8.038414
83.0	8.038428
84.0	8.03844
85.0	8.03845
86.0	8.038459
87.0	8.038467
88.0	8.038474
89.0	8.03848
90.0	8.038486
91.0	8.03849
92.0	8.038494
93.0	8.038498
94.0	8.038501
95.0	8.038503
96.0	8.038506
97.0	8.038508
98.0	8.038509
99.0	8.038511
100.0	8.038512