python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/sacCer3/Saccharomyces_cerevisiae.SacCer_Apr2011.20.ORF.PFam32-A.tab domains.txt 0 1e-5 sacCer3--Saccharomyces_cerevisiae.SacCer_Apr2011.20.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Babesia_bovis-ASM16539v1/GCA_000165395.1_ASM16539v1_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Babesia_bovis-ASM16539v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Babesia_equi-strainWA-JCVI-bewag-v1.1/GCA_000342415.1_JCVI-bewag-v1.1_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Babesia_equi-strainWA-JCVI-bewag-v1.1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Babesia_microti-strainRI-ASM69194v1/GCA_000691945.1_ASM69194v1_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Babesia_microti-strainRI-ASM69194v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Besnoitia_besnoiti-Bbes1.0/GCA_002563875.1_Bbes1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Besnoitia_besnoiti-Bbes1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Cryptosporidium_hominis-ASM642v1/GCF_000006425.1_ASM642v1_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Cryptosporidium_hominis-ASM642v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Cryptosporidium_muris-RN66-JCVI-cmg-v1.0/GCA_000006515.1_JCVI_cmg_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Cryptosporidium_muris-RN66-JCVI-cmg-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Cryptosporidium_parvum-IowaII-ASM16534v1/GCA_000165345.1_ASM16534v1_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Cryptosporidium_parvum-IowaII-ASM16534v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Eimeria_acervulina-EAH001/GCA_000499425.1_EAH001_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Eimeria_acervulina-EAH001.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Eimeria_brunetti-EBH001/GCA_000499725.1_EBH001_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Eimeria_brunetti-EBH001.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Eimeria_maxima-EMW001/GCA_000499605.1_EMW001_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Eimeria_maxima-EMW001.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Eimeria_mitis-EMH001/GCA_000499745.1_EMH001_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Eimeria_mitis-EMH001.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Eimeria_necatrix-ENH001/GCA_000499385.1_ENH001_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Eimeria_necatrix-ENH001.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Eimeria_praecox-EPH001/GCA_000499445.1_EPH001_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Eimeria_praecox-EPH001.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Eimeria-tenella-ETH001/GCA_000499545.1_ETH001_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Eimeria-tenella-ETH001.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Gregarina_niphandrodes-GNI3/GCA_000223845.4_GNI3_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Gregarina_niphandrodes-GNI3.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Hammondia_hammondi-HHA1v02/GCA_000258005.2_HHA1_v02_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Hammondia_hammondi-HHA1v02.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Neospora_caninum-Liverpool-ASM20886v2/GCA_000208865.2_ASM20886v2_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Neospora_caninum-Liverpool-ASM20886v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Theileria_orientalis-strain-Shintoku-ASM74089v1/GCA_000740895.1_ASM74089v1_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Theileria_orientalis-strain-Shintoku-ASM74089v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apicomplexa/Theileria_parva-ASM16536v1/GCA_000165365.1_ASM16536v1_protein.PFam32-A.tab domains.txt 0 1e-5 Apicomplexa--Theileria_parva-ASM16536v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Apusozoa/Thecamonas_trahens_atcc_50062_1/thecamonas_trahens_atcc_50062_1_transcripts.ORF.PFam32-A.tab domains.txt 0 1e-5 Apusozoa--Thecamonas_trahens_atcc_50062_1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Archamoebae/Entamoeba_dispar-SAW760-JCVI_EDISG_1.0/GCA_000209125.2_JCVI_EDISG_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Archamoebae--Entamoeba_dispar-SAW760-JCVI_EDISG_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Archamoebae/Entamoeba_histolytica/Entamoeba_histolytica.JCVI-ESG2-1.0.20.ORF.PFam32-A.tab domains.txt 0 1e-5 Archamoebae--Entamoeba_histolytica.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Archamoebae/Entamoeba_invadens_IP1-EIA2_v2/GCA_000330505.1_EIA2_v2_protein.PFam32-A.tab domains.txt 0 1e-5 Archamoebae--Entamoeba_invadens_IP1-EIA2_v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Archamoebae/Entamoeba_nuttalli_P19-ENU1_v1/GCA_000257125.1_ENU1_v1_protein.PFam32-A.tab domains.txt 0 1e-5 Archamoebae--Entamoeba_nuttalli_P19-ENU1_v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Cercozoa/Plasmodiophora_brassicae-pbe3.h15/GCA_001049375.1_pbe3.h15_protein.PFam32-A.tab domains.txt 0 1e-5 Cercozoa--Plasmodiophora_brassicae-pbe3.h15.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Charophyta/Chara_braunii-Cbr_1.0/GCA_003427395.1_Cbr_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Charophyta--Chara_braunii-Cbr_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Charophyta/Klebsormidium_flaccidum-ASM70883v1/GCA_000708835.1_ASM70883v1_protein.PFam32-A.tab domains.txt 0 1e-5 Charophyta--Klebsormidium_flaccidum-ASM70883v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Charophyta/Klebsormidium_nitens-ASM70883v1/GCA_000708835.1_ASM70883v1_protein.PFam32-A.tab domains.txt 0 1e-5 Charophyta--Klebsormidium_nitens-ASM70883v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Chlorarachniophyta/Bigelowiella_natans_CCMP2755_v1.0/Bigna1_all_genes.ORF.PFam32-A.tab domains.txt 0 1e-5 Chlorarachniophyta--Bigelowiella_natans_CCMP2755_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Chlorophyta/Auxenochlorella_protothecoides-ASM73321v1/GCA_000733215.1_ASM73321v1_protein.PFam32-A.tab domains.txt 0 1e-5 Chlorophyta--Auxenochlorella_protothecoides-ASM73321v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Chlorophyta/Chlamydomonas_eustigma-C.eustigma_genome_v1.0/GCA_002335675.1_C.eustigma_genome_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Chlorophyta--Chlamydomonas_eustigma-C.eustigma_genome_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Chlorophyta/Chlorella_sorokiniana-Chlorella_sorokiniana_2.0/GCA_002245835.2_Chlorella_sorokiniana_2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Chlorophyta--Chlorella_sorokiniana-Chlorella_sorokiniana_2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Chlorophyta/Coccomyxa_subellipsoidea_C-169-v2.0/GCA_000258705.1_Coccomyxa_subellipsoidae_v2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Chlorophyta--Coccomyxa_subellipsoidea_C-169-v2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Chlorophyta/Gonium_pectorale-ASM158458v1/GCA_001584585.1_ASM158458v1_protein.PFam32-A.tab domains.txt 0 1e-5 Chlorophyta--Gonium_pectorale-ASM158458v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Chlorophyta/Helicosporidium_sp._1.0-Helico_v1.0/GCA_000690575.1_Helico_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Chlorophyta--Helicosporidium_sp._1.0-Helico_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Chlorophyta/Micractinium_conductrix-ASM224581v2/GCA_002245815.2_ASM224581v2_protein.PFam32-A.tab domains.txt 0 1e-5 Chlorophyta--Micractinium_conductrix-ASM224581v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Chlorophyta/Micromonas_pusilla_CCMP1545_v2.0/GCA_000151265.1_Micromonas_pusilla_CCMP1545_v2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Chlorophyta--Micromonas_pusilla_CCMP1545_v2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Chlorophyta/Monoraphidium_neglectum-mono_v1/GCA_000611645.1_mono_v1_protein.PFam32-A.tab domains.txt 0 1e-5 Chlorophyta--Monoraphidium_neglectum-mono_v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Chlorophyta/Raphidocelis_subcapitata-Rsub_1.0/GCA_003203535.1_Rsub_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Chlorophyta--Raphidocelis_subcapitata-Rsub_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Choanoflagellata/Monosiga_brevicollis_mx1_1/monosiga_brevicollis_mx1_1_transcripts.ORF.PFam32-A.tab domains.txt 0 1e-5 Choanoflagellata--Monosiga_brevicollis_mx1_1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Choanoflagellata/Salpingoeca_rosetta_1/salpingoeca_rosetta_1_proteins.PFam32-A.tab domains.txt 0 1e-5 Choanoflagellata--Salpingoeca_rosetta_1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Chromerida/Vitrella_brassicaformis_CCMP3155-Vbrassicaformis/GCA_001179505.1_Vbrassicaformis_protein.PFam32-A.tab domains.txt 0 1e-5 Chromerida--Vitrella_brassicaformis_CCMP3155-Vbrassicaformis.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Ciliates/Ichthyophthirius_multifiliis-JCVI-IMG1-V.1/GCA_000220395.1_JCVI-IMG1-V.1_protein.PFam32-A.tab domains.txt 0 1e-5 Ciliates--Ichthyophthirius_multifiliis-JCVI-IMG1-V.1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Ciliates/Oxytricha_trifallax_asm_v1.1/GCA_000295675.1_oxytricha_asm_v1.1_protein.PFam32-A.tab domains.txt 0 1e-5 Ciliates--Oxytricha_trifallax_asm_v1.1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Ciliates/Paramecium_sonneborni-ATCC_30995/psonneborni_ATCC_30995_annotation_v1.0.ORF.PFam32-A.tab domains.txt 0 1e-5 Ciliates--Paramecium_sonneborni-ATCC_30995.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Ciliates/Paramecium_sonneborni-ATCC_30995/psonneborni_ATCC_30995_annotation_v1.0.protein.PFam32-A.tab domains.txt 0 1e-5 Ciliates--Paramecium_sonneborni-ATCC_30995.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Ciliates/Pseudocohnilembus_persalinus-ASM144751v1/GCA_001447515.1_ASM144751v1_protein.PFam32-A.tab domains.txt 0 1e-5 Ciliates--Pseudocohnilembus_persalinus-ASM144751v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Ciliates/Stentor_coeruleus-ASM197095v1/GCA_001970955.1_ASM197095v1_protein.PFam32-A.tab domains.txt 0 1e-5 Ciliates--Stentor_coeruleus-ASM197095v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Ciliates/Stylonychia_lemnae_asm_v1.0/GCA_000751175.1_Stylonychia_lemnae_asm_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Ciliates--Stylonychia_lemnae_asm_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Cryptophyte/Guillardia_theta/GCA_000315625.1_Guith1_protein.PFam32-A.tab domains.txt 0 1e-5 Cryptophyte--Guillardia_theta.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Diatomes/Fistulifera_solaris-Fsol_1.0/GCA_002217885.1_Fsol_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Diatomes--Fistulifera_solaris-Fsol_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Diatomes/Fragilariopsis_cylindrus_CCMP1102-Fracy1/GCA_001750085.1_Fracy1_protein.PFam32-A.tab domains.txt 0 1e-5 Diatomes--Fragilariopsis_cylindrus_CCMP1102-Fracy1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Diatomes/Phaeodactylum_tricornutum-ASM15095v2/GCA_000150955.2_ASM15095v2_protein.PFam32-A.tab domains.txt 0 1e-5 Diatomes--Phaeodactylum_tricornutum-ASM15095v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Diatomes/Phaeodactylum_tricornutum-ASM15095v2/Phaeodactylum_tricornutum.ASM15095v2.20.fixed.ORF.PFam32-A.tab domains.txt 0 1e-5 Diatomes--Phaeodactylum_tricornutum-ASM15095v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Diatomes/Thalassiosira_oceanica-ThaOc_1.0/GCA_000296195.2_ThaOc_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Diatomes--Thalassiosira_oceanica-ThaOc_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Diatomes/Thalassiosira_pseudonana_v3.0/Thaps3_bd_unmapped_GeneModels_AllModels_20070514.ORF.PFam32-A.tab domains.txt 0 1e-5 Diatomes--Thalassiosira_pseudonana_v3.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Diatomes/Thalassiosira_pseudonana_v3.0/Thaps3_chromosomes_geneModels_AllModels_20060913.ORF.PFam32-A.tab domains.txt 0 1e-5 Diatomes--Thalassiosira_pseudonana_v3.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Dinoflagellata/Symbiodinium_minutum_Clade_B1_Ver1.120123/symbB.v1.2.augustus.prot.PFam32-A.tab domains.txt 0 1e-5 Dinoflagellata--Symbiodinium_minutum_Clade_B1_Ver1.120123.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Diplomonada/Giardia_lamblia/Giardia_lamblia.GCA_000002435.1.20.ORF.PFam32-A.tab domains.txt 0 1e-5 Diplomonada--Giardia_lamblia.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Diplomonada/Giardia_lamblia_P15-ASM18266v1/GCA_000182665.1_ASM18266v1_protein.PFam32-A.tab domains.txt 0 1e-5 Diplomonada--Giardia_lamblia_P15-ASM18266v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Diplomonada/Kipferlia_bialata-KIPB_1.0/GCA_003568945.1_KIPB_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Diplomonada--Kipferlia_bialata-KIPB_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Diplomonada/Spironucleus_salmonicida-SSK3.0/GCA_000497125.1_SSK3.0_protein.PFam32-A.tab domains.txt 0 1e-5 Diplomonada--Spironucleus_salmonicida-SSK3.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Discosea/Acanthamoeba_castellanii_str._Neff-v1/GCA_000313135.1_Acastellanii.strNEFF_v1_genomic.ORF.PFam32-A.tab domains.txt 0 1e-5 Discosea--Acanthamoeba_castellanii_str._Neff-v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Discosea/Acanthamoeba_castellanii_str._Neff-v1/GCA_000313135.1_Acastellanii.strNEFF_v1_protein.PFam32-A.tab domains.txt 0 1e-5 Discosea--Acanthamoeba_castellanii_str._Neff-v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Eustygmatophyta/Nannochloropsis_gaditana_CCMP526-ASM24072v1/GCA_000240725.1_ASM24072v1_protein.PFam32-A.tab domains.txt 0 1e-5 Eustygmatophyta--Nannochloropsis_gaditana_CCMP526-ASM24072v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Eustygmatophyta/Nannochloropsis_gaditana-NagaB31_1.0/GCA_000569095.1_NagaB31_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Eustygmatophyta--Nannochloropsis_gaditana-NagaB31_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Filasterea/Capsaspora_owczarzaki_atcc_30864_2/capsaspora_owczarzaki_atcc_30864_2_transcripts.ORF.PFam32-A.tab domains.txt 0 1e-5 Filasterea--Capsaspora_owczarzaki_atcc_30864_2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Filasterea/Capsaspora_owczarzaki_ATCC_30864-C_owczarzaki_V2/GCA_000151315.2_C_owczarzaki_V2_protein.PFam32-A.tab domains.txt 0 1e-5 Filasterea--Capsaspora_owczarzaki_ATCC_30864-C_owczarzaki_V2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Foraminifera/Reticulomyxa_filosa-1.0/GCA_000512085.1_Reti_assembly1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Foraminifera--Reticulomyxa_filosa-1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Absidia_repens_NRRL_1336-Absrep1/GCA_002105175.1_Absrep1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Absidia_repens_NRRL_1336-Absrep1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Acidomyces_richmondensis-ASM157207v1/GCA_001572075.1_ASM157207v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Acidomyces_richmondensis-ASM157207v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Acremonium_chrysogenum_ATCC_11550-ASM76926v1/GCA_000769265.1_ASM76926v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Acremonium_chrysogenum_ATCC_11550-ASM76926v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Agaricus_bisporus_var._bisporus_H97-Agabi_varbisH97_2/GCA_000300575.1_Agabi_varbisH97_2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Agaricus_bisporus_var._bisporus_H97-Agabi_varbisH97_2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Allomyces_macrogynus_ATCC_38327-A_macrogynus_V3/GCA_000151295.1_A_macrogynus_V3_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Allomyces_macrogynus_ATCC_38327-A_macrogynus_V3.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Alternaria_alternata-Altal1/GCA_001642055.1_Altal1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Alternaria_alternata-Altal1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Amanita_muscaria_Koide_BX008_v1.0/GCA_000827485.1_Amanita_muscaria_Koide_BX008_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Amanita_muscaria_Koide_BX008_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Anthracocystis_flocculosa_PF-1-Pflocc_1.0/GCA_000417875.1_Pflocc_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Anthracocystis_flocculosa_PF-1-Pflocc_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Arthrobotrys_oligospora_ATCC_24927-AOL24927_1.0/GCA_000225545.1_AOL24927_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Arthrobotrys_oligospora_ATCC_24927-AOL24927_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Arthroderma_benhamiae_CBS_112371-ASM15112v2/GCF_000151125.1_ASM15112v2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Arthroderma_benhamiae_CBS_112371-ASM15112v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Arthroderma_otae_CBS113480-ASM15114v1/GCA_000151145.1_ASM15114v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Arthroderma_otae_CBS113480-ASM15114v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Aschersonia_aleyrodis_RCEF_2490-AAL_1.0/GCA_001636675.1_AAL_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Aschersonia_aleyrodis_RCEF_2490-AAL_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Ascochyta_rabiei-AscRab1.0/GCA_001630375.1_AscRab1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Ascochyta_rabiei-AscRab1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Ascosphaera_apis_ARSEF_7405-AAP_1.0/GCA_001636715.1_AAP_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Ascosphaera_apis_ARSEF_7405-AAP_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Aspergillus_calidoustus-Acal_Allpaths_LG/GCA_001511075.1_Acal_Allpaths_LG_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Aspergillus_calidoustus-Acal_Allpaths_LG.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Aspergillus_lentulus-Alt_assembly01/GCA_001445615.1_Alt_assembly01_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Aspergillus_lentulus-Alt_assembly01.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Aspergillus_luchuensis-AspL_2604/GCA_001602395.1_AspL_2604_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Aspergillus_luchuensis-AspL_2604.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Aspergillus_nomius_NRRL_13137-ASM120477v1/GCA_001204775.1_ASM120477v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Aspergillus_nomius_NRRL_13137-ASM120477v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Aspergillus_ochraceoroseus-ASM98666v1/GCA_000986665.1_ASM98666v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Aspergillus_ochraceoroseus-ASM98666v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Aspergillus_parasiticus_SU-1-ASM95608v1/GCA_000956085.1_ASM95608v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Aspergillus_parasiticus_SU-1-ASM95608v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Aspergillus_rambellii-ASM98664v1/GCA_000986645.1_ASM98664v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Aspergillus_rambellii-ASM98664v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Aspergillus_udagawae-Aud_assembly01/GCA_001078395.1_Aud_assembly01_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Aspergillus_udagawae-Aud_assembly01.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Aspergillus_ustus-Austus1.0/GCA_000812125.1_Austus1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Aspergillus_ustus-Austus1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Aureobasidium_pullulans_var._melanogenum_CBS_110374-v1.0/GCA_000721775.1_Aureobasidium_pullulans_var._melanogenum_CBS_110374_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Aureobasidium_pullulans_var._melanogenum_CBS_110374-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Auricularia_subglabra_TFB-10046_SS5-V1.0/GCA_000265015.1_Auricularia_subglabra_SS-5_V1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Auricularia_subglabra_TFB-10046_SS5-V1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Basidiobolus_meristosporus_CBS_931.73-Basme2finSC/GCA_002104905.1_Basme2finSC_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Basidiobolus_meristosporus_CBS_931.73-Basme2finSC.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Baudoinia_panamericana_UAMH10762-Bauco1/GCA_000338955.1_Bauco1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Baudoinia_panamericana_UAMH10762-Bauco1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Beauveria_bassiana_ARSEF_2860-ASM28067v1/GCA_000280675.1_ASM28067v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Beauveria_bassiana_ARSEF_2860-ASM28067v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Bipolaris_maydis_ATCC_48331-CocheC4_1/GCA_000354255.1_CocheC4_1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Bipolaris_maydis_ATCC_48331-CocheC4_1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Bipolaris_oryzae_ATCC_44560-Cochliobolus_miyabeanus_v1.0/GCA_000523455.1_Cochliobolus_miyabeanus_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Bipolaris_oryzae_ATCC_44560-Cochliobolus_miyabeanus_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Bipolaris_sorokiniana_ND90Pr-Cocsa1/GCA_000338995.1_Cocsa1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Bipolaris_sorokiniana_ND90Pr-Cocsa1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Bipolaris_victoriae_FI3-Cochliobolus_victoriae_v1.0/GCA_000527765.1_Cochliobolus_victoriae_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Bipolaris_victoriae_FI3-Cochliobolus_victoriae_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Bipolaris_zeicola_26-R-13-Cochliobolus_carbonum_v1.0/GCA_000523435.1_Cochliobolus_carbonum_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Bipolaris_zeicola_26-R-13-Cochliobolus_carbonum_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Blastomyces_dermatitidis_ER-3-ASM352v2/GCA_000003525.2_ASM352v2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Blastomyces_dermatitidis_ER-3-ASM352v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Blastomyces_gilchristii_SLH14081-ASM385v2/GCA_000003855.2_ASM385v2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Blastomyces_gilchristii_SLH14081-ASM385v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Botryobasidium_botryosum_FD-172_SS1-Botbo1/GCA_000697705.1_Botbo1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Botryobasidium_botryosum_FD-172_SS1-Botbo1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Byssochlamys_spectabilis_No._5-PVAR5_assembly01/GCA_000497085.1_PVAR5_assembly01_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Byssochlamys_spectabilis_No._5-PVAR5_assembly01.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Calocera_cornea_HHB12733-Calco1/GCA_001632435.1_Calco1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Calocera_cornea_HHB12733-Calco1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Calocera_viscosa_TUFC12733-Calvi1/GCA_001630345.1_Calvi1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Calocera_viscosa_TUFC12733-Calvi1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Candida_auris-ASM118947v1/GCA_001189475.1_ASM118947v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Candida_auris-ASM118947v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Candida_maltosa_Xu316-Cmaltosa_v01/GCA_000344705.1_Cmaltosa_v01_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Candida_maltosa_Xu316-Cmaltosa_v01.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Candida_tenuis_ATCC_10573-v1.0/GCA_000223465.1_Candida_tenuis_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Candida_tenuis_ATCC_10573-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Capronia_coronata_CBS_617.96-Capr_coro_CBS_617_96_V1/GCA_000585585.1_Capr_coro_CBS_617_96_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Capronia_coronata_CBS_617.96-Capr_coro_CBS_617_96_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Capronia_epimyces_CBS_606.96-Capr_epim_CBS_606_96_V1/GCA_000585565.1_Capr_epim_CBS_606_96_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Capronia_epimyces_CBS_606.96-Capr_epim_CBS_606_96_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Capronia_semi-immersa-Capr_semi_CBS27337_V1/GCA_000835435.1_Capr_semi_CBS27337_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Capronia_semi-immersa-Capr_semi_CBS27337_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Catenaria_anguillulae_PL171-Catan2/GCA_002102555.1_Catan2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Catenaria_anguillulae_PL171-Catan2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Ceraceosorus_bombacis/GCA_900000165.1_Ceraceosorus_bombacis_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Ceraceosorus_bombacis.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Ceratocystis_platani-ASM97888v1/GCA_000978885.1_ASM97888v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Ceratocystis_platani-ASM97888v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chaetomium_globosum_CBS_148.51-ASM14336v1/GCA_000143365.1_ASM14336v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Chaetomium_globosum_CBS_148.51-ASM14336v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chaetomium_thermophilum_var._thermophilum_DSM_1495-CTHT_3.0/GCA_000221225.1_CTHT_3.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Chaetomium_thermophilum_var._thermophilum_DSM_1495-CTHT_3.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Cladophialophora_bantiana_CBS_173.52-Clad_bant_CBS_173_52_V1/GCA_000835475.1_Clad_bant_CBS_173_52_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Cladophialophora_bantiana_CBS_173.52-Clad_bant_CBS_173_52_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Cladophialophora_carrionii_CBS_160.54-Clad_carr_CBS_160_54_V1/GCA_000365165.2_Clad_carr_CBS_160_54_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Cladophialophora_carrionii_CBS_160.54-Clad_carr_CBS_160_54_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Cladophialophora_immunda-Clad_immu_CBS83496_V1/GCA_000835495.1_Clad_immu_CBS83496_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Cladophialophora_immunda-Clad_immu_CBS83496_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Cladophialophora_yegresii_CBS_114405-Clad_yegr_CBS_114405_V1/GCA_000585515.1_Clad_yegr_CBS_114405_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Cladophialophora_yegresii_CBS_114405-Clad_yegr_CBS_114405_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Claviceps_purpurea_20.1-ASM34735v1/GCA_000347355.1_ASM34735v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Claviceps_purpurea_20.1-ASM34735v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Clavispora_lusitaniae_ATCC_42720-ASM383v1/GCA_000003835.1_ASM383v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Clavispora_lusitaniae_ATCC_42720-ASM383v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Clohesyomyces_aquaticus_CBS_115471-Cloaq1/GCA_002105025.1_Cloaq1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Clohesyomyces_aquaticus_CBS_115471-Cloaq1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Coccidioides_immitis_H538.4-ASM14981v1/GCA_000149815.1_ASM14981v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Coccidioides_immitis_H538.4-ASM14981v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Coccidioides_immitis_RS-ASM14933v2/GCA_000149335.2_ASM14933v2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Coccidioides_immitis_RS-ASM14933v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Coccidioides_posadasii_C735_delta_SOWgp-JCVI-cpa1-1.0/GCA_000151335.1_JCVI-cpa1-1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Coccidioides_posadasii_C735_delta_SOWgp-JCVI-cpa1-1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Colletotrichum_fioriniae_PJ7-CFIO01/GCA_000582985.1_CFIO01_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Colletotrichum_fioriniae_PJ7-CFIO01.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Colletotrichum_gloeosporioides_Nara_gc-5/GCA_000319635.1_Colletotrichum_gloeosporioides_Nara_gc-5_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Colletotrichum_gloeosporioides_Nara_gc-5.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Colletotrichum_graminicola_M1.001-C_graminicola_M1_001_V1/GCA_000149035.1_C_graminicola_M1_001_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Colletotrichum_graminicola_M1.001-C_graminicola_M1_001_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Colletotrichum_higginsianum-ASM31379v2/GCA_000313795.2_ASM31379v2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Colletotrichum_higginsianum-ASM31379v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Colletotrichum_incanum_MAFF238704-v1.0_Ci238704v1/GCA_001625285.1_Ci238704v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Colletotrichum_incanum_MAFF238704-v1.0_Ci238704v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Colletotrichum_nymphaeae_SA-01-CNYM01/GCA_001563115.1_CNYM01_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Colletotrichum_nymphaeae_SA-01-CNYM01.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Colletotrichum_salicis-CSAL01/GCA_001563125.1_CSAL01_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Colletotrichum_salicis-CSAL01.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Colletotrichum_simmondsii-CSIM01/GCA_001563135.1_CSIM01_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Colletotrichum_simmondsii-CSIM01.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Colletotrichum_sublineola-ASM69613v1/GCA_000696135.1_ASM69613v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Colletotrichum_sublineola-ASM69613v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Conidiobolus_coronatus_NRRL28638/GCA_001566745.1_Conidiobolus_coronatus_NRRL28638_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Conidiobolus_coronatus_NRRL28638.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Coniophora_puteana_RWD-64-598_SS2-Conpu1/GCA_000271625.1_Conpu1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Coniophora_puteana_RWD-64-598_SS2-Conpu1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Coniosporium_apollinis_CBS_100218-Coni_apol_CBS100218_V1/GCA_000281105.1_Coni_apol_CBS100218_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Coniosporium_apollinis_CBS_100218-Coni_apol_CBS100218_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Coprinopsis_cinerea_okayama7_130-CC3/GCA_000182895.1_CC3_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Coprinopsis_cinerea_okayama7_130-CC3.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Cordyceps_confragosa_RCEF_1005-LEL_1.0/GCA_001636795.1_LEL_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Cordyceps_confragosa_RCEF_1005-LEL_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Cordyceps_militaris_CM01-CmilitarisCM01_v01/GCA_000225605.1_CmilitarisCM01_v01_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Cordyceps_militaris_CM01-CmilitarisCM01_v01.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Cryptococcus_gattii_WM276-ASM18594v1/GCA_000185945.1_ASM18594v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Cryptococcus_gattii_WM276-ASM18594v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Cylindrobasidium_torrendii_FP15055_ss-10-Cylto1/GCA_000934385.1_Cylto1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Cylindrobasidium_torrendii_FP15055_ss-10-Cylto1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Cyphellophora_europaea_CBS_101466-Phia_euro_CBS_101466_V1/GCA_000365145.2_Phia_euro_CBS_101466_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Cyphellophora_europaea_CBS_101466-Phia_euro_CBS_101466_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Dacryopinax_sp._DJM_731_SSP1_v1.0/GCA_000292625.1_Dacryopinax_sp._DJM_731_SSP1_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Dacryopinax_sp._DJM_731_SSP1_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Dactylellina_haptotyla_CBS_200.50-MHA_v2/GCA_000441935.1_MHA_v2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Dactylellina_haptotyla_CBS_200.50-MHA_v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Daedalea_quercina_L-15889-Daequ1/GCA_001632345.1_Daequ1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Daedalea_quercina_L-15889-Daequ1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Debaryomyces_fabryi-debFab1.0/GCA_001447935.1_debFab1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Debaryomyces_fabryi-debFab1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Dichomitus_squalens_LYAD-421_SS1-v1.0/GCA_000275845.1_Dichomitus_squalens_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Dichomitus_squalens_LYAD-421_SS1-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Diplodia_seriata-UCDDS831v0.1/GCA_001006355.1_UCDDS831v0.1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Diplodia_seriata-UCDDS831v0.1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Dothistroma_septosporum_NZE10-v1.0/GCA_000340195.1_Dothistroma_septosporum_NZE10_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Dothistroma_septosporum_NZE10-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Drechmeria_coniospora-ASM162519v1/GCA_001625195.1_ASM162519v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Drechmeria_coniospora-ASM162519v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Drechslerella_stenobrocha_248-DREv1/GCA_000525045.1_DREv1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Drechslerella_stenobrocha_248-DREv1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Emmonsia_crescens_UAMH_3008-ASM100828v1/GCA_001008285.1_ASM100828v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Emmonsia_crescens_UAMH_3008-ASM100828v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Emmonsia_parva_UAMH_139-ASM101475v1/GCA_001014755.1_ASM101475v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Emmonsia_parva_UAMH_139-ASM101475v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Endocarpon_pusillum_Z07020-EPUS/GCA_000464535.1_EPUS_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Endocarpon_pusillum_Z07020-EPUS.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Eremothecium_cymbalariae_DBVPG7215-ASM23536v1/GCA_000235365.1_ASM23536v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Eremothecium_cymbalariae_DBVPG7215-ASM23536v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Eremothecium_gossypii_ATCC_10895-ASM9102v4/GCA_000091025.4_ASM9102v4_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Eremothecium_gossypii_ATCC_10895-ASM9102v4.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Eremothecium_sinecaudum-ASM154855v1/GCA_001548555.1_ASM154855v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Eremothecium_sinecaudum-ASM154855v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Erysiphe_necator-ASM79871v1/GCA_000798715.1_ASM79871v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Erysiphe_necator-ASM79871v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Escovopsis_weberi-ASM127849v1/GCA_001278495.1_ASM127849v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Escovopsis_weberi-ASM127849v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Eutypa_lata_UCREL1-UCREL1V03/GCA_000349385.1_UCREL1V03_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Eutypa_lata_UCREL1-UCREL1V03.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Exidia_glandulosa_HHB12029-Exigl1/GCA_001632375.1_Exigl1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Exidia_glandulosa_HHB12029-Exigl1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Exophiala_aquamarina_CBS_119918-Exop_aqua_CBS_119918_V1/GCA_000709125.1_Exop_aqua_CBS_119918_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Exophiala_aquamarina_CBS_119918-Exop_aqua_CBS_119918_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Exophiala_dermatitidis_NIH-UT8656-Exop_derm_V1/GCA_000230625.1_Exop_derm_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Exophiala_dermatitidis_NIH-UT8656-Exop_derm_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Exophiala_mesophila-Exop_meso_CBS40295_V1/GCA_000836275.1_Exop_meso_CBS40295_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Exophiala_mesophila-Exop_meso_CBS40295_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Exophiala_oligosperma-Exop_olig_CBS72588_V1/GCA_000835515.1_Exop_olig_CBS72588_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Exophiala_oligosperma-Exop_olig_CBS72588_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Exophiala_sideris-Exop_side_CBS121828_V1/GCA_000835395.1_Exop_side_CBS121828_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Exophiala_sideris-Exop_side_CBS121828_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Exophiala_spinifera-Exop_spin_CBS89968_V1/GCA_000836115.1_Exop_spin_CBS89968_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Exophiala_spinifera-Exop_spin_CBS89968_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Exophiala_xenobiotica-Exop_xeno_CBS118157_V1/GCA_000835505.1_Exop_xeno_CBS118157_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Exophiala_xenobiotica-Exop_xeno_CBS118157_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Fibroporia_radiculosa-ASM31352v1/GCA_000313525.1_ASM31352v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Fibroporia_radiculosa-ASM31352v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Fibulorhizoctonia_sp._CBS_109695-Fibsp1/GCA_001630335.1_Fibsp1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Fibulorhizoctonia_sp._CBS_109695-Fibsp1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Fistulina_hepatica_ATCC_64428-Fishe1/GCA_000934395.1_Fishe1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Fistulina_hepatica_ATCC_64428-Fishe1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Fomitiporia_mediterranea_MF3_22-Fomme1/GCA_000271605.1_Fomme1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Fomitiporia_mediterranea_MF3_22-Fomme1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Fomitopsis_pinicola_FP-58527_SS1-Fompi3/GCA_000344655.2_Fompi3_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Fomitopsis_pinicola_FP-58527_SS1-Fompi3.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Fonsecaea_erecta-ASM165198v1/GCA_001651985.1_ASM165198v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Fonsecaea_erecta-ASM165198v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Fonsecaea_monophora-ASM164247v1/GCA_001642475.1_ASM164247v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Fonsecaea_monophora-ASM164247v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Fonsecaea_multimorphosa_CBS_102226-Fons_mult_CBS_102226_V1/GCA_000836435.1_Fons_mult_CBS_102226_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Fonsecaea_multimorphosa_CBS_102226-Fons_mult_CBS_102226_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Fonsecaea_nubica-ASM164696v1/GCA_001646965.1_ASM164696v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Fonsecaea_nubica-ASM164696v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Fonsecaea_pedrosoi_CBS_271.37-Fons_pedr_CBS_271_37_V1/GCA_000835455.1_Fons_pedr_CBS_271_37_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Fonsecaea_pedrosoi_CBS_271.37-Fons_pedr_CBS_271_37_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Fusarium_graminearum-CS3005v1/GCA_000599445.1_CS3005v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Fusarium_graminearum-CS3005v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Fusarium_langsethiae-ASM129263v1/GCA_001292635.1_ASM129263v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Fusarium_langsethiae-ASM129263v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Fusarium_pseudograminearum_CS3096-FP7/GCA_000303195.2_FP7_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Fusarium_pseudograminearum_CS3096-FP7.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Galerina_marginata_CBS_339.88-Galma1/GCA_000697645.1_Galma1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Galerina_marginata_CBS_339.88-Galma1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Gelatoporia_subvermispora_B-Ceriporiopsis_subvermispora_B_v1.0/GCA_000320605.2_Ceriporiopsis_subvermispora_B_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Gelatoporia_subvermispora_B-Ceriporiopsis_subvermispora_B_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Geotrichum_candidum-New2.3_08062011/GCA_001402995.1_New2.3_08062011_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Geotrichum_candidum-New2.3_08062011.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Glarea_lozoyensis_ATCC_20868-GLAREA/GCA_000409485.1_GLAREA_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Glarea_lozoyensis_ATCC_20868-GLAREA.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Gloeophyllum_trabeum_ATCC_11539-Glotr1_1/GCA_000344685.1_Glotr1_1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Gloeophyllum_trabeum_ATCC_11539-Glotr1_1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Grosmannia_clavigera_kw1407-Sanger-454-IlluminaPA_2.0/GCA_000143105.2_Sanger-454-IlluminaPA_2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Grosmannia_clavigera_kw1407-Sanger-454-IlluminaPA_2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Gymnopus_luxurians_FD-317_M1-Gymlu1/GCA_000827265.1_Gymlu1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Gymnopus_luxurians_FD-317_M1-Gymlu1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Hanseniaspora_uvarum-Huva2.0/GCA_000968475.1_Huva2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Hanseniaspora_uvarum-Huva2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Hebeloma_cylindrosporum_h7_v2.0/GCA_000827355.1_Hebeloma_cylindrosporum_h7_v2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Hebeloma_cylindrosporum_h7_v2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Hesseltinella_vesiculosa_NRRL3301-Hesve2/GCA_002104935.1_Hesve2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Hesseltinella_vesiculosa_NRRL3301-Hesve2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Heterobasidion_irregulare_TC_32-1-v2.0/GCA_000320585.2_Heterobasidion_irregulare_v2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Heterobasidion_irregulare_TC_32-1-v2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Hirsutella_minnesotensis_3608-ASM95604v1/GCA_000956045.1_ASM95604v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Hirsutella_minnesotensis_3608-ASM95604v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Histoplasma_capsulatum_NAm1-ASM14958v1/GCA_000149585.1_ASM14958v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Histoplasma_capsulatum_NAm1-ASM14958v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Hydnomerulius_pinastri_MD-312-Hydpi2/GCA_000827185.1_Hydpi2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Hydnomerulius_pinastri_MD-312-Hydpi2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Hypholoma_sublateritium_FD-334_SS-4-Hypsu1/GCA_000827495.1_Hypsu1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Hypholoma_sublateritium_FD-334_SS-4-Hypsu1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Hypsizygus_marmoreus-ASM160531v1/GCA_001605315.1_ASM160531v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Hypsizygus_marmoreus-ASM160531v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Isaria_fumosorosea_ARSEF_2679-ISF_1.0/GCA_001636725.1_ISF_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Isaria_fumosorosea_ARSEF_2679-ISF_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Jaapia_argillacea_MUCL_33604-Jaaar1/GCA_000697665.1_Jaaar1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Jaapia_argillacea_MUCL_33604-Jaaar1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Kazachstania_africana_CBS_2517-Ka_CBS2517/GCA_000304475.1_Ka_CBS2517_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Kazachstania_africana_CBS_2517-Ka_CBS2517.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Kluyveromyces_dobzhanskii_CBS_2104-KLDO_01/GCA_000820885.1_KLDO_01_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Kluyveromyces_dobzhanskii_CBS_2104-KLDO_01.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Kluyveromyces_marxianus_DMKU3-1042-Kmar_1.0/GCA_001417885.1_Kmar_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Kluyveromyces_marxianus_DMKU3-1042-Kmar_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Kluyveromyces_marxianus-KM1777_03/GCA_001417835.1_KM1777_03_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Kluyveromyces_marxianus-KM1777_03.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Kockovaella_imperatae-Kocim1/GCA_002102565.1_Kocim1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Kockovaella_imperatae-Kocim1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Komagataella_pastoris_CBS_7435-PicPas_Mar2011/GCA_000223565.1_PicPas_Mar2011_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Komagataella_pastoris_CBS_7435-PicPas_Mar2011.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Kuraishia_capsulata_CBS_1993-AUH_PRJEB4427_v1/GCA_000576695.1_AUH_PRJEB4427_v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Kuraishia_capsulata_CBS_1993-AUH_PRJEB4427_v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Laccaria_amethystina_LaAM-08-1-v1.0/GCA_000827195.1_Laccaria_amethystina_LaAM-08-1_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Laccaria_amethystina_LaAM-08-1-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Laccaria_bicolor_S238N_H82-V1.0/GCA_000143565.1_V1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Laccaria_bicolor_S238N_H82-V1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Lachancea_lanzarotensis-LALA0/GCA_000938715.1_LALA0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Lachancea_lanzarotensis-LALA0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Lachancea_thermotolerans_CBS6340-ASM14280v1/GCA_000142805.1_ASM14280v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Lachancea_thermotolerans_CBS6340-ASM14280v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Laetiporus_sulphureus_93-53-Laesu1/GCA_001632365.1_Laesu1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Laetiporus_sulphureus_93-53-Laesu1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Leucoagaricus_sp._SymC.cos-ASM156373v1/GCA_001563735.1_ASM156373v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Leucoagaricus_sp._SymC.cos-ASM156373v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Leucosporidiella_creatinivora_62-1032-Leucr1/GCA_002105055.1_Leucr1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Leucosporidiella_creatinivora_62-1032-Leucr1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Lichtheimia_corymbifera_JMRC_FSU_9682-454Minimus/GCA_000723665.1_454Minimus_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Lichtheimia_corymbifera_JMRC_FSU_9682-454Minimus.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Lichtheimia_ramosa-Lramosa_hybrid_454_Illumina/GCA_000945115.1_Lramosa_hybrid_454_Illumina_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Lichtheimia_ramosa-Lramosa_hybrid_454_Illumina.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Linderina_pennispora_ATCC_12442-Linpe1/GCA_002104995.1_Linpe1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Linderina_pennispora_ATCC_12442-Linpe1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Lobosporangium_transversale_NRRL_3116-Lobtra1/GCA_002105155.1_Lobtra1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Lobosporangium_transversale_NRRL_3116-Lobtra1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Macrophomina_phaseolina_MS6-MphMS6_1.0/GCA_000302655.1_MphMS6_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Macrophomina_phaseolina_MS6-MphMS6_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Madurella_mycetomatis-ASM127576v2/GCA_001275765.2_ASM127576v2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Madurella_mycetomatis-ASM127576v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Magnaporthiopsis_poae_ATCC_64411-Mag_poae_ATCC_64411_V1/GCA_000193285.1_Mag_poae_ATCC_64411_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Magnaporthiopsis_poae_ATCC_64411-Mag_poae_ATCC_64411_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Malassezia_globosa_CBS_7966-ASM18169v1/GCA_000181695.1_ASM18169v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Malassezia_globosa_CBS_7966-ASM18169v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Malassezia_pachydermatis-MalaPachy/GCA_001278385.1_MalaPachy_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Malassezia_pachydermatis-MalaPachy.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Malassezia_sympodialis_ATCC_42132-ASM34930v2/GCA_000349305.2_ASM34930v2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Malassezia_sympodialis_ATCC_42132-ASM34930v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Melampsora_larici-populina_98AG31-v1.0/GCA_000204055.1_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Melampsora_larici-populina_98AG31-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Metarhizium_acridum_CQMa_102-MetAcr_May2010/GCA_000187405.1_MetAcr_May2010_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Metarhizium_acridum_CQMa_102-MetAcr_May2010.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Metarhizium_anisopliae_ARSEF_549-MAN_1.0/GCA_000814975.1_MAN_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Metarhizium_anisopliae_ARSEF_549-MAN_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Metarhizium_anisopliae_BRIP_53293-ASM42696v1/GCA_000426965.1_ASM42696v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Metarhizium_anisopliae_BRIP_53293-ASM42696v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Metarhizium_brunneum_ARSEF_3297-MBR_1.0/GCA_000814965.1_MBR_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Metarhizium_brunneum_ARSEF_3297-MBR_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Metarhizium_guizhouense_ARSEF_977-MGU_1.0/GCA_000814955.1_MGU_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Metarhizium_guizhouense_ARSEF_977-MGU_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Metarhizium_majus_ARSEF_297-MAJ_1.0/GCA_000814945.1_MAJ_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Metarhizium_majus_ARSEF_297-MAJ_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Metarhizium_rileyi_RCEF_4871-NOR_1.0/GCA_001636745.1_NOR_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Metarhizium_rileyi_RCEF_4871-NOR_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Metarhizium_robertsii_ARSEF_23-MAA_2.0/GCA_000187425.2_MAA_2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Metarhizium_robertsii_ARSEF_23-MAA_2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Meyerozyma_guilliermondii_ATCC_6260-ASM14942v1/GCA_000149425.1_ASM14942v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Meyerozyma_guilliermondii_ATCC_6260-ASM14942v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Microbotryum_lychnidis-dioicae_p1A1_Lamole-M_violaceum_V1/GCA_000166175.1_M_violaceum_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Microbotryum_lychnidis-dioicae_p1A1_Lamole-M_violaceum_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Microdochium_bolleyi_v1.0/GCA_001566295.1_Microdochium_bolleyi_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Microdochium_bolleyi_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Microsporum_gypseum_CBS118893-MS_CBS118893/GCA_000150975.2_MS_CBS118893_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Microsporum_gypseum_CBS118893-MS_CBS118893.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Millerozyma_farinosa_CBS_7064_ASM31589v1/GCA_000315895.1_ASM31589v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Millerozyma_farinosa_CBS_7064_ASM31589v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Mixia_osmundae_IAM_14324-Mosmundae_2.0/GCA_000241205.2_Mosmundae_2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Mixia_osmundae_IAM_14324-Mosmundae_2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Mixia_osmundae_IAM_14324-v1.0/GCA_000708205.1_Mixia_osmundae_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Mixia_osmundae_IAM_14324-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Moesziomyces_antarcticus-ASM74776v1/GCA_000747765.1_ASM74776v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Moesziomyces_antarcticus-ASM74776v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Moesziomyces_aphidis_DSM_70725-PseuAph1.0/GCA_000517465.1_PseuAph1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Moesziomyces_aphidis_DSM_70725-PseuAph1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Moniliophthora_perniciosa_FA553-ASM18302v1/GCF_000183025.1_ASM18302v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Moniliophthora_perniciosa_FA553-ASM18302v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Moniliophthora_roreri_MCA_2997-M_roreri_MCA_2997_v1/GCF_000488995.1_M_roreri_MCA_2997_v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Moniliophthora_roreri_MCA_2997-M_roreri_MCA_2997_v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Mucor_ambiguus-ASM95059v1/GCA_000950595.1_ASM95059v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Mucor_ambiguus-ASM95059v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Mucor_circinelloides_f._lusitanicus_CBS_277.49-Mucci2/GCA_001638945.1_Mucci2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Mucor_circinelloides_f._lusitanicus_CBS_277.49-Mucci2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Myceliophthora_thermophila_ATCC_42464-ASM22609v1/GCA_000226095.1_ASM22609v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Myceliophthora_thermophila_ATCC_42464-ASM22609v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Mycosphaerella_eumusae-ASM157823v1/GCA_001578235.1_ASM157823v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Mycosphaerella_eumusae-ASM157823v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Naumovozyma_castellii_CBS4309-ASM23734v1/GCA_000237345.1_ASM23734v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Naumovozyma_castellii_CBS4309-ASM23734v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Naumovozyma_dairenensis_CBS421-ASM22711v2/GCA_000227115.2_ASM22711v2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Naumovozyma_dairenensis_CBS421-ASM22711v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Neofusicoccum_parvum_UCRNP2-UCRNP2V3/GCA_000385595.1_UCRNP2V3_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Neofusicoccum_parvum_UCRNP2-UCRNP2V3.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Neolentinus_lepideus_HHB14362_ss-1-Neole1/GCA_001632425.1_Neole1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Neolentinus_lepideus_HHB14362_ss-1-Neole1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Neonectria_ditissima-R0905_v2.0/GCA_001306435.1_R0905_v2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Neonectria_ditissima-R0905_v2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Neurospora_tetrasperma_FGSC_2508-v2.0/GCA_000213175.1_v2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Neurospora_tetrasperma_FGSC_2508-v2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Ogataea_parapolymorpha_DL-1-Hansenula_2/GCA_000187245.3_Hansenula_2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Ogataea_parapolymorpha_DL-1-Hansenula_2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Oidiodendron_maius_Zn-v1.0/GCA_000827325.1_Oidiodendron_maius_Zn_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Oidiodendron_maius_Zn-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Ophiocordyceps_sinensis_CO18-ASM44836v1/GCA_000448365.1_ASM44836v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Ophiocordyceps_sinensis_CO18-ASM44836v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Ophiocordyceps_unilateralis-ASM127257v1/GCA_001272575.1_ASM127257v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Ophiocordyceps_unilateralis-ASM127257v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Paracoccidioides_brasiliensis_Pb03-Paracocci_br_Pb03_V2/GCA_000150475.2_Paracocci_br_Pb03_V2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Paracoccidioides_brasiliensis_Pb03-Paracocci_br_Pb03_V2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Paracoccidioides_brasiliensis_Pb18_Paracocci_br_Pb18_V2/GCA_000150735.2_Paracocci_br_Pb18_V2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Paracoccidioides_brasiliensis_Pb18_Paracocci_br_Pb18_V2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Paracoccidioides_lutzii_Pb01-Paracocci_br_Pb01_V2/GCA_000150705.2_Paracocci_br_Pb01_V2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Paracoccidioides_lutzii_Pb01-Paracocci_br_Pb01_V2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Paraphaeosphaeria_sporulosa-Parsp1/GCA_001642045.1_Parsp1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Paraphaeosphaeria_sporulosa-Parsp1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Parasitella_parasitica-PP.v1/GCA_000938895.1_PP.v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Parasitella_parasitica-PP.v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Parastagonospora_nodorum_SN15-ASM14691v2/GCA_000146915.2_ASM14691v2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Parastagonospora_nodorum_SN15-ASM14691v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Paxillus_involutus_ATCC_200175_v1.0/GCA_000827475.1_Paxillus_involutus_ATCC_200175_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Paxillus_involutus_ATCC_200175_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Paxillus_rubicundulus_Ve08.2h10_v1.0/GCA_000827395.1_Paxillus_rubicundulus_Ve08.2h10_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Paxillus_rubicundulus_Ve08.2h10_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Penicillium_camemberti_FM_013-PCAMFM013_20131106/GCA_000513335.1_PCAMFM013_20131106_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Penicillium_camemberti_FM_013-PCAMFM013_20131106.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Penicillium_chrysogenum-ASM71027v1/GCA_000710275.1_ASM71027v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Penicillium_chrysogenum-ASM71027v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Penicillium_digitatum_Pd1-PdigPd1_v1/GCA_000315645.2_PdigPd1_v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Penicillium_digitatum_Pd1-PdigPd1_v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Penicillium_expansum-ASM76974v1/GCA_000769745.1_ASM76974v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Penicillium_expansum-ASM76974v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Penicillium_freii-ASM151392v1/GCA_001513925.1_ASM151392v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Penicillium_freii-ASM151392v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Penicillium_griseofulvum-ASM156193v1/GCA_001561935.1_ASM156193v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Penicillium_griseofulvum-ASM156193v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Penicillium_oxalicum_114-2-pde_v1.0/GCA_000346795.1_pde_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Penicillium_oxalicum_114-2-pde_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Penicillium_roqueforti_FM164-PROQFM164_20130607/GCA_000513255.1_PROQFM164_20130607_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Penicillium_roqueforti_FM164-PROQFM164_20130607.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Penicillium_rubens_Wisconsin_54-1255-PenChr_Nov2007/GCA_000226395.1_PenChr_Nov2007_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Penicillium_rubens_Wisconsin_54-1255-PenChr_Nov2007.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Peniophora_sp._CONT-Ricme1/GCA_001632445.1_Ricme1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Peniophora_sp._CONT-Ricme1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Pestalotiopsis_fici_W106-1-PFICI/GCA_000516985.1_PFICI_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Pestalotiopsis_fici_W106-1-PFICI.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Phaeoacremonium_minimum_UCRPA7-UCRPA7V03/GCA_000392275.1_UCRPA7V03_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Phaeoacremonium_minimum_UCRPA7-UCRPA7V03.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Phaeomoniella_chlamydospora-UCRPA7V1.0/GCA_001006345.1_UCRPA7V1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Phaeomoniella_chlamydospora-UCRPA7V1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Phanerochaete_carnosa_HHB-10118-Sp_v1.0/GCA_000300595.1_Phanerochaete_carnosa_HHB-10118-Sp_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Phanerochaete_carnosa_HHB-10118-Sp_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Phialocephala_scopiformis-Phisc1/GCA_001500285.1_Phisc1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Phialocephala_scopiformis-Phisc1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Phialophora_attae-ASM129925v1/GCA_001299255.1_ASM129925v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Phialophora_attae-ASM129925v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Phlebiopsis_gigantea_11061_1_CR5-6-Phlgi1/GCA_000832265.1_Phlgi1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Phlebiopsis_gigantea_11061_1_CR5-6-Phlgi1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Pichia_kudriavzevii-ASM76445v1/GCA_000764455.1_ASM76445v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Pichia_kudriavzevii-ASM76445v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Piloderma_croceum_F_1598-v1.0/GCA_000827315.1_Piloderma_croceum_F_1598_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Piloderma_croceum_F_1598-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Piriformospora_indica_DSM_11827-ASM31354v1/GCA_000313545.1_ASM31354v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Piriformospora_indica_DSM_11827-ASM31354v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Pisolithus_microcarpus_441_v1.0/GCA_000827275.1_Pisolithus_microcarpus_441_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Pisolithus_microcarpus_441_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Pisolithus_tinctorius_Marx_270_v1.0/GCA_000827335.1_Pisolithus_tinctorius_Marx_270_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Pisolithus_tinctorius_Marx_270_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Pleurotus_ostreatus_PC15-PleosPC15_2/GCA_000697685.1_PleosPC15_2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Pleurotus_ostreatus_PC15-PleosPC15_2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Plicaturopsis_crispa_FD-325_SS-3-Plicr1/GCA_000827205.1_Plicr1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Plicaturopsis_crispa_FD-325_SS-3-Plicr1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Pneumocystis_carinii_B80-Pneu_cari_B80_V3/GCA_001477545.1_Pneu_cari_B80_V3_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Pneumocystis_carinii_B80-Pneu_cari_B80_V3.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Pneumocystis_jirovecii_RU7-Pneu_jiro_RU7_V2/GCA_001477535.1_Pneu_jiro_RU7_V2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Pneumocystis_jirovecii_RU7-Pneu_jiro_RU7_V2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Pneumocystis_murina_B123-V4/GCA_000349005.2_Pneumo_murina_B123_V4_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Pneumocystis_murina_B123-V4.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Pochonia_chlamydosporia_170-ASM165323v1/GCA_001653235.1_ASM165323v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Pochonia_chlamydosporia_170-ASM165323v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Podospora_anserina_S_mat_plus-ASM22654v1/GCA_000226545.1_ASM22654v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Podospora_anserina_S_mat_plus-ASM22654v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Postia_placenta_Mad-698-R-V1.0/GCA_000006255.1_Postia_placenta_V1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Postia_placenta_Mad-698-R-V1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Protomyces_lactucaedebilis_12-1054-Prola1/GCA_002105105.1_Prola1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Protomyces_lactucaedebilis_12-1054-Prola1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Pseudocercospora_fijiensis_CIRAD86-Mycfi2/GCA_000340215.1_Mycfi2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Pseudocercospora_fijiensis_CIRAD86-Mycfi2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Pseudocercospora_musae-ASM157822v1/GCA_001578225.1_ASM157822v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Pseudocercospora_musae-ASM157822v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Pseudogymnoascus_destructans_20631-21-Geom_destructans_V1/GCA_000184105.1_Geom_destructans_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Pseudogymnoascus_destructans_20631-21-Geom_destructans_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Pseudogymnoascus_sp._VKM_F-3557-DG3/GCA_000750665.1_DG3_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Pseudogymnoascus_sp._VKM_F-3557-DG3.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Pseudogymnoascus_sp._VKM_F-3808-G1/GCA_000750675.1_DG1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Pseudogymnoascus_sp._VKM_F-3808-G1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Pseudomassariella_vexata_CBS_129021-Pseve2/GCA_002105095.1_Pseve2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Pseudomassariella_vexata_CBS_129021-Pseve2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Puccinia_sorghi-ASM126337v1/GCA_001263375.1_ASM126337v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Puccinia_sorghi-ASM126337v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Puccinia_striiformis_f._sp._tritici_PST-78-P_striiformis_V1/GCA_001191645.1_P_striiformis_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Puccinia_striiformis_f._sp._tritici_PST-78-P_striiformis_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Punctularia_strigosozonata_HHB-11173_SS5-v1.0/GCA_000264995.1_Punctularia_strigosozonata_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Punctularia_strigosozonata_HHB-11173_SS5-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Purpureocillium_lilacinum-ASM165320v1/GCA_001653205.1_ASM165320v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Purpureocillium_lilacinum-ASM165320v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Pyronema_omphalodes_CBS_100304-Pcon_v1/GCA_000981605.1_Pcon_v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Pyronema_omphalodes_CBS_100304-Pcon_v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Rasamsonia_emersonii_CBS_393.64-ASM96859v1/GCF_000968595.1_ASM96859v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Rasamsonia_emersonii_CBS_393.64-ASM96859v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Rhinocladiella_mackenziei_CBS_650.93-Rhin_mack_CBS_650_93_V1/GCA_000835555.1_Rhin_mack_CBS_650_93_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Rhinocladiella_mackenziei_CBS_650.93-Rhin_mack_CBS_650_93_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Rhizoclosmatium_globosum_JEL800-Rhihy1/GCA_002104985.1_Rhihy1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Rhizoclosmatium_globosum_JEL800-Rhihy1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Rhizoctonia_solani_AG-3_Rhs1AP/GCA_000524645.1_Rhizoctonia_solani_AG-3_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Rhizoctonia_solani_AG-3_Rhs1AP.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Rhizophagus_irregularis_DAOM_181602-Gloin1/GCA_000439145.2_Gloin1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Rhizophagus_irregularis_DAOM_181602-Gloin1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Rhizopus_delemar_RA_99-880-RO3/GCA_000149305.1_RO3_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Rhizopus_delemar_RA_99-880-RO3.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Rhizopus_microsporus-RMATCC62417_Allpaths-LG/GCA_900000135.1_RMATCC62417_Allpaths-LG_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Rhizopus_microsporus-RMATCC62417_Allpaths-LG.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Rhodotorula_graminis_WP1-Rhoba1_1/GCA_001329695.1_Rhoba1_1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Rhodotorula_graminis_WP1-Rhoba1_1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Rhodotorula_sp._JG-1b-Rhosp1/GCA_001541205.1_Rhosp1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Rhodotorula_sp._JG-1b-Rhosp1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Rhodotorula_toruloides_NP11-RHOziaDV1.0/GCA_000320785.2_RHOziaDV1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Rhodotorula_toruloides_NP11-RHOziaDV1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Rosellinia_necatrix-ASM144559v1/GCA_001445595.1_ASM144559v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Rosellinia_necatrix-ASM144559v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Rozella_allomycis_CSF55-Rozella_k41_t100/GCA_000442015.1_Rozella_k41_t100_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Rozella_allomycis_CSF55-Rozella_k41_t100.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Saccharomyces_arboricola_H-6-SacArb1.0/GCA_000292725.1_SacArb1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Saccharomyces_arboricola_H-6-SacArb1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Saccharomyces_eubayanus-SEUB3.0/GCA_001298625.1_SEUB3.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Saccharomyces_eubayanus-SEUB3.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Saccharomyces_kudriavzevii_IFO1802-v1.0/GCA_000167075.2_Saccharomyces_kudriavzevii_strain_IFO1802_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Saccharomyces_kudriavzevii_IFO1802-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Saccharomyces_sp._boulardii-ASM141397v1/GCA_001413975.1_ASM141397v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Saccharomyces_sp._boulardii-ASM141397v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Saitoella_complicata_NRRL_Y-17804-Scomplicata_3.0/GCA_000227095.3_Scomplicata_3.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Saitoella_complicata_NRRL_Y-17804-Scomplicata_3.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Scedosporium_apiospermum-ScApio1.0/GCA_000732125.1_ScApio1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Scedosporium_apiospermum-ScApio1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Scheffersomyces_stipitis_CBS_6054-ASM20916v1/GCA_000209165.1_ASM20916v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Scheffersomyces_stipitis_CBS_6054-ASM20916v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Schizopora_paradoxa-Schpa1/GCA_001020605.1_Schpa1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Schizopora_paradoxa-Schpa1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Schizosaccharomyces_cryophilus_OY26-SCY4/GCA_000004155.2_SCY4_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Schizosaccharomyces_cryophilus_OY26-SCY4.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Schizosaccharomyces_japonicus_yFS275-SJ5/GCA_000149845.2_SJ5_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Schizosaccharomyces_japonicus_yFS275-SJ5.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Schizosaccharomyces_octosporus_yFS286-SO6/GCA_000150505.2_SO6_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Schizosaccharomyces_octosporus_yFS286-SO6.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Schizosaccharomyces_pombe.ASM294v2/Schizosaccharomyces_pombe.ASM294v2.20.fixed.ORF.PFam32-A.tab domains.txt 0 1e-5 Fungi--Schizosaccharomyces_pombe.ASM294v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Scleroderma_citrinum_Foug_A_v1.0/GCA_000827425.1_Scleroderma_citrinum_Foug_A_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Scleroderma_citrinum_Foug_A_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Sclerotinia_borealis_F-4157-SBOR_1/GCA_000503235.1_SBOR_1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Sclerotinia_borealis_F-4157-SBOR_1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Sclerotinia_sclerotiorum_1980_UF-70-ASM14694v1/GCA_000146945.1_ASM14694v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Sclerotinia_sclerotiorum_1980_UF-70-ASM14694v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Sebacina_vermifera_MAFF_305830_v1.0/GCA_000827415.1_Sebacina_vermifera_MAFF_305830_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Sebacina_vermifera_MAFF_305830_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Serpula_lacrymans_var._lacrymans_S7.9-v1.0/GCA_000218685.1_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Serpula_lacrymans_var._lacrymans_S7.9-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Setospaeria_trucica_Et28A_v1.0/GCA_000359705.1_Setospaeria_trucica_Et28A_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Setospaeria_trucica_Et28A_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Sistotremastrum_niveocremeum_HHB9708-Sisni1/GCA_001630475.1_Sisni1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Sistotremastrum_niveocremeum_HHB9708-Sisni1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Sistotremastrum_suecicum_HHB10207_ss-3-Sissu1/GCA_001632355.1_Sissu1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Sistotremastrum_suecicum_HHB10207_ss-3-Sissu1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Sordaria_macrospora_k-hell-ASM18280v2/GCA_000182805.2_ASM18280v2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Sordaria_macrospora_k-hell-ASM18280v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Spathaspora_passalidarum_NRRL_Y-27907-v2.0/GCA_000223485.1_Spathaspora_passalidarum_v2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Spathaspora_passalidarum_NRRL_Y-27907-v2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Sphaerobolus_stellatus_SS14-Sphst1/GCA_000827215.1_Sphst1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Sphaerobolus_stellatus_SS14-Sphst1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Sphaerulina_musiva_SO2202-Septoria_musiva_SO2202_v1.0/GCA_000320565.2_Septoria_musiva_SO2202_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Sphaerulina_musiva_SO2202-Septoria_musiva_SO2202_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Sporidiobolus_salmonicolor-SPOSA68321A01/GCA_001373355.1_SPOSA68321A01_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Sporidiobolus_salmonicolor-SPOSA68321A01.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Sporisorium_scitamineum/GCA_001243155.1_Sporisorium_scitamineum_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Sporisorium_scitamineum.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Sporothrix_brasiliensis_5110-S_brasiliensis_5110_v1/GCA_000820605.1_S_brasiliensis_5110_v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Sporothrix_brasiliensis_5110-S_brasiliensis_5110_v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Sporothrix_insectorum_RCEF_264-SPI_1.0/GCA_001636815.1_SPI_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Sporothrix_insectorum_RCEF_264-SPI_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Sporothrix_schenckii_1099-18-S_schenckii_v1/GCA_000961545.1_S_schenckii_v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Sporothrix_schenckii_1099-18-S_schenckii_v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Stachybotrys_chartarum_IBT_7711-S7711v1/GCA_000730325.1_S7711v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Stachybotrys_chartarum_IBT_7711-S7711v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Stachybotrys_chlorohalonata_IBT_40285-S40285v1/GCA_000732775.1_S40285v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Stachybotrys_chlorohalonata_IBT_40285-S40285v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Stagonospora_sp._SRC1lsM3a-Stasp1/GCA_001644525.1_Stasp1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Stagonospora_sp._SRC1lsM3a-Stasp1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Stemphylium_lycopersici-ASM119154v1/GCA_001191545.1_ASM119154v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Stemphylium_lycopersici-ASM119154v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Stereum_hirsutum_FP-91666_SS1-Stehi1/GCA_000264905.1_Stehi1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Stereum_hirsutum_FP-91666_SS1-Stehi1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Sugiyamaella_lignohabitans-ASM164002v1/GCA_001640025.1_ASM164002v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Sugiyamaella_lignohabitans-ASM164002v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Suillus_luteus_UH-Slu-Lm8-n1-Suilu1/GCA_000827255.1_Suilu1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Suillus_luteus_UH-Slu-Lm8-n1-Suilu1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Syncephalastrum_racemosum_NRRL_2496-Synrac1/GCA_002105135.1_Synrac1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Syncephalastrum_racemosum_NRRL_2496-Synrac1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Talaromyces_cellulolyticus-TcelY94_1.0/GCA_000829775.1_TcelY94_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Talaromyces_cellulolyticus-TcelY94_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Talaromyces_islandicus-PIS/GCA_000985935.1_PIS_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Talaromyces_islandicus-PIS.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Talaromyces_marneffei_ATCC_18224-JCVI-PMFA1-2.0/GCA_000001985.1_JCVI-PMFA1-2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Talaromyces_marneffei_ATCC_18224-JCVI-PMFA1-2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Talaromyces_stipitatus_ATCC_10500-JCVI-TSTA1-3.0/GCA_000003125.1_JCVI-TSTA1-3.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Talaromyces_stipitatus_ATCC_10500-JCVI-TSTA1-3.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Talaromyces_verruculosus-ASM130527v1/GCA_001305275.1_ASM130527v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Talaromyces_verruculosus-ASM130527v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Taphrina_deformans_PYCC_5710-ASM31292v2/GCA_000312925.2_ASM31292v2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Taphrina_deformans_PYCC_5710-ASM31292v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Termitomyces_sp._J132-TerJ1321.0/GCA_001263195.1_TerJ1321.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Termitomyces_sp._J132-TerJ1321.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Tetrapisispora_blattae_CBS_6284-ASM31591v1/GCA_000315915.1_ASM31591v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Tetrapisispora_blattae_CBS_6284-ASM31591v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Tetrapisispora_phaffii_CBS4417-ASM23690v1/GCA_000236905.1_ASM23690v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Tetrapisispora_phaffii_CBS4417-ASM23690v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Thielavia_terrestris_NRRL8126-ASM22611v1/GCA_000226115.1_ASM22611v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Thielavia_terrestris_NRRL8126-ASM22611v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Thielaviopsis_punctulata-ASM96861v1/GCA_000968615.1_ASM96861v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Thielaviopsis_punctulata-ASM96861v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Tilletia_caries-ASM164500v1/GCA_001645005.1_ASM164500v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Tilletia_caries-ASM164500v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Tilletia_controversa-ASM164504v1/GCA_001645045.1_ASM164504v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Tilletia_controversa-ASM164504v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Tilletia_indica-ASM164501v1/GCA_001645015.1_ASM164501v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Tilletia_indica-ASM164501v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Tilletiaria_anomala_UBC_951-v1.0/GCA_000711695.1_Tilletiaria_anomala_UBC_951_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Tilletiaria_anomala_UBC_951-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Tilletia_walkeri-ASM164505v1/GCA_001645055.1_ASM164505v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Tilletia_walkeri-ASM164505v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Tolypocladium_ophioglossoides_CBS_100239-Tophv1.0/GCA_001189435.1_Tophv1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Tolypocladium_ophioglossoides_CBS_100239-Tophv1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Torrubiella_hemipterigena-Allpaths-LG/GCA_000825705.1_Allpaths-LG_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Torrubiella_hemipterigena-Allpaths-LG.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Torulaspora_delbrueckii-ASM24337v1/GCA_000243375.1_ASM24337v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Torulaspora_delbrueckii-ASM24337v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Trametes_cinnabarina-BN946/GCA_000765035.1_BN946_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Trametes_cinnabarina-BN946.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Trametes_versicolor_FP-101664_SS1-v1.0/GCA_000271585.1_Trametes_versicolor_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Trametes_versicolor_FP-101664_SS1-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Tremella_mesenterica_DSM_1558-Treme1/GCA_000271645.1_Treme1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Tremella_mesenterica_DSM_1558-Treme1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Trichoderma_gamsii-ASM148177v1/GCA_001481775.1_ASM148177v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Trichoderma_gamsii-ASM148177v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Trichoderma_harzianum-ThB05-1.0/GCA_000733085.2_ThB05-1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Trichoderma_harzianum-ThB05-1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Trichoderma_virens_Gv29-8-TRIVI_v2.0/GCA_000170995.2_TRIVI_v2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Trichoderma_virens_Gv29-8-TRIVI_v2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Trichophyton_equinum_CBS_127.97-ASM15117v1/GCA_000151175.1_ASM15117v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Trichophyton_equinum_CBS_127.97-ASM15117v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Trichophyton_interdigitale_MR816-Tric_inte_MR816_V1/GCA_000622975.1_Tric_inte_MR816_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Trichophyton_interdigitale_MR816-Tric_inte_MR816_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Trichophyton_rubrum_CBS118892-ASM15142v1/GCA_000151425.1_ASM15142v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Trichophyton_rubrum_CBS118892-ASM15142v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Trichophyton_soudanense_CBS_452.61-Tric_soud_CBS_452_61_V1/GCA_000616865.1_Tric_soud_CBS_452_61_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Trichophyton_soudanense_CBS_452.61-Tric_soud_CBS_452_61_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Trichophyton_tonsurans_CBS_112818-ASM15145v1/GCA_000151455.1_ASM15145v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Trichophyton_tonsurans_CBS_112818-ASM15145v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Trichophyton_verrucosum_HKI_0517-ASM15150v1/GCA_000151505.1_ASM15150v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Trichophyton_verrucosum_HKI_0517-ASM15150v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Trichophyton_violaceum-CMCCFT3l/GCA_001651435.1_CMCC_F_T3l_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Trichophyton_violaceum-CMCCFT3l.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Trichosporon_asahii_var._asahii_CBS_2479-V1/GCA_000293215.1_Trichosporon_asahii_1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Trichosporon_asahii_var._asahii_CBS_2479-V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Trichosporon_oleaginosus-Triol1/GCA_001027345.1_Triol1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Trichosporon_oleaginosus-Triol1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Tulasnella_calospora_AL13_4D_v1.0/GCA_000827465.1_Tulasnella_calospora_AL13_4D_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Tulasnella_calospora_AL13_4D_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Uncinocarpus_reesii_1704-ASM351v2/GCA_000003515.2_ASM351v2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Uncinocarpus_reesii_1704-ASM351v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Ustilaginoidea_virens-V1/GCA_000687475.1_Assembly_for_version_1_of_the_Villosiclava_virens_genome_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Ustilaginoidea_virens-V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Ustilago_hordei-ASM28603v1/GCA_000286035.1_ASM28603v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Ustilago_hordei-ASM28603v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Valsa_mali-ASM81815v1/GCA_000818155.1_ASM81815v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Valsa_mali-ASM81815v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Vanderwaltozyma_polyspora_DSM70294-ASM15003v1/GCA_000150035.1_ASM15003v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Vanderwaltozyma_polyspora_DSM70294-ASM15003v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Verruconis_gallopava-O_gall_CBS43764/GCA_000836295.1_O_gall_CBS43764_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Verruconis_gallopava-O_gall_CBS43764.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Verticillium_alfalfae_VaMs.102-ASM15082v1/GCA_000150825.1_ASM15082v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Verticillium_alfalfae_VaMs.102-ASM15082v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Verticillium_dahliae_VdLs.17-ASM15067v2/GCA_000150675.2_ASM15067v2_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Verticillium_dahliae_VdLs.17-ASM15067v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Verticillium_longisporum-vl1.denovo.v1/GCA_001268145.1_vl1.denovo.v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Verticillium_longisporum-vl1.denovo.v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Wallemia_ichthyophaga_EXF-994-v1.0/GCA_000400465.1_Wallemia_ichthyophaga_version_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Wallemia_ichthyophaga_EXF-994-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Wallemia_mellicola_CBS_633.66-v1.0/GCA_000263375.1_Wallemia_sebi_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Wallemia_mellicola_CBS_633.66-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Wickerhamomyces_ciferrii-ASM31348v1/GCF_000313485.1_ASM31348v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Wickerhamomyces_ciferrii-ASM31348v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Xanthophyllomyces_dendrorhous-Xden1/GCA_001007165.2_Xden1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Xanthophyllomyces_dendrorhous-Xden1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Xylona_heveae_TC161_v1.0/GCA_001619985.1_Xylona_heveae_TC161_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Xylona_heveae_TC161_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Zygosaccharomyces_bailii_CLIB_213-ZYBA0/GCA_000442885.1_ZYBA0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Zygosaccharomyces_bailii_CLIB_213-ZYBA0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Zygosaccharomyces_rouxii-ASM2636v1/GCA_000026365.1_ASM2636v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Zygosaccharomyces_rouxii-ASM2636v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Zymoseptoria_brevis-ASM96659v1/GCA_000966595.1_ASM96659v1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Zymoseptoria_brevis-ASM96659v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Haptophyta/Chrysochromulina_sp._CCMP291-Ctobinv2/GCA_001275005.1_Ctobinv2_protein.PFam32-A.tab domains.txt 0 1e-5 Haptophyta--Chrysochromulina_sp._CCMP291-Ctobinv2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Haptophyta/Emiliania_huxleyi_CCMP1516_v1.0/GCA_000372725.1_Emiliana_huxleyi_CCMP1516_main_genome_assembly_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Haptophyta--Emiliania_huxleyi_CCMP1516_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Heterolobosea/Naegleria_gruberi_v1.0/GCA_000004985.1_V1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Heterolobosea--Naegleria_gruberi_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Ichthyosporea/Sphaeroforma_arctica_jp610/sphaeroforma_arctica_jp610_1_transcripts.ORF.PFam32-A.tab domains.txt 0 1e-5 Ichthyosporea--Sphaeroforma_arctica_jp610.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Kinetoplastida/Bodo_saltans-BSAL/GCA_001460835.1_BSAL_protein.PFam32-A.tab domains.txt 0 1e-5 Kinetoplastida--Bodo_saltans-BSAL.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Kinetoplastida/Leishmania_braziliensis-ASM284v2/GCA_000002845.2_ASM284v2_protein.PFam32-A.tab domains.txt 0 1e-5 Kinetoplastida--Leishmania_braziliensis-ASM284v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Kinetoplastida/Leishmania_donovani-ASM22713v2/GCA_000227135.2_ASM22713v2_protein.PFam32-A.tab domains.txt 0 1e-5 Kinetoplastida--Leishmania_donovani-ASM22713v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Kinetoplastida/Leishmania_infantum-JPCM5-ASM287v2/GCA_000002875.2_ASM287v2_protein.PFam32-A.tab domains.txt 0 1e-5 Kinetoplastida--Leishmania_infantum-JPCM5-ASM287v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Kinetoplastida/Leishmania_mexicana-ASM23466v4/GCA_000234665.4_ASM23466v4_protein.PFam32-A.tab domains.txt 0 1e-5 Kinetoplastida--Leishmania_mexicana-ASM23466v4.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Kinetoplastida/Leishmania_panamensis-ASM75516v1/GCA_000755165.1_ASM75516v1_protein.PFam32-A.tab domains.txt 0 1e-5 Kinetoplastida--Leishmania_panamensis-ASM75516v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Kinetoplastida/Leptomonas_pyrrhocoris-ASM129339v1/GCA_001293395.1_ASM129339v1_protein.PFam32-A.tab domains.txt 0 1e-5 Kinetoplastida--Leptomonas_pyrrhocoris-ASM129339v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Kinetoplastida/Leptomonas_seymouri_ATCC_30220-ASM129953v1/GCA_001299535.1_ASM129953v1_protein.PFam32-A.tab domains.txt 0 1e-5 Kinetoplastida--Leptomonas_seymouri_ATCC_30220-ASM129953v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Kinetoplastida/Perkinsela_sp_ccap_1560_4-ASM123584v1/GCA_001235845.1_ASM123584v1_protein.PFam32-A.tab domains.txt 0 1e-5 Kinetoplastida--Perkinsela_sp_ccap_1560_4-ASM123584v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Kinetoplastida/Phytomonas_sp.-isolate-EM1-AKH_PRJEB1535_v1/GCA_000582765.1_AKH_PRJEB1535_v1_protein.PFam32-A.tab domains.txt 0 1e-5 Kinetoplastida--Phytomonas_sp.-isolate-EM1-AKH_PRJEB1535_v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Kinetoplastida/Trypanosoma_congolense-IL3000-ASM22739v2/GCA_000227395.2_ASM22739v2_protein.PFam32-A.tab domains.txt 0 1e-5 Kinetoplastida--Trypanosoma_congolense-IL3000-ASM22739v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Kinetoplastida/Trypanosoma_cruzi-Dm28c_v01/GCA_000496795.1_T.cruzi.Dm28c_v01_protein.PFam32-A.tab domains.txt 0 1e-5 Kinetoplastida--Trypanosoma_cruzi-Dm28c_v01.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Kinetoplastida/Trypanosoma_grayi-Tgr_V1/GCA_000691245.1_Tgr_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Kinetoplastida--Trypanosoma_grayi-Tgr_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Kinetoplastida/Trypanosoma_rangeli-SC58v1/GCA_000492115.1_T_rangeli_SC58v1_protein.PFam32-A.tab domains.txt 0 1e-5 Kinetoplastida--Trypanosoma_rangeli-SC58v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Kinetoplastida/Trypanosoma_vivax-Y486-ASM22737v1/GCA_000227375.1_ASM22737v1_protein.PFam32-A.tab domains.txt 0 1e-5 Kinetoplastida--Trypanosoma_vivax-Y486-ASM22737v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Amborella_trichopoda-AMTR1.0/GCA_000471905.1_AMTR1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Land_plants--Amborella_trichopoda-AMTR1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Cucumis_sativus-ASM407v2/GCA_000004075.2_ASM407v2_protein.PFam32-A.tab domains.txt 0 1e-5 Land_plants--Cucumis_sativus-ASM407v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Eucalyptus_grandis-Egrandis1_0/GCA_000612305.1_Egrandis1_0_protein.PFam32-A.tab domains.txt 0 1e-5 Land_plants--Eucalyptus_grandis-Egrandis1_0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Eutrema_salsugineum-Eutsalg1_0/GCA_000478725.1_Eutsalg1_0_protein.PFam32-A.tab domains.txt 0 1e-5 Land_plants--Eutrema_salsugineum-Eutsalg1_0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Gossypium_raimondii-Graimondii2_0/GCA_000327365.1_Graimondii2_0_protein.PFam32-A.tab domains.txt 0 1e-5 Land_plants--Gossypium_raimondii-Graimondii2_0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Oryza_sativa_Japonica-Nipponbare-IRGSP-1.0/GCF_001433935.1_IRGSP-1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Land_plants--Oryza_sativa_Japonica-Nipponbare-IRGSP-1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Phaseolus_vulgaris-PhaVulg1_0/GCA_000499845.1_PhaVulg1_0_protein.PFam32-A.tab domains.txt 0 1e-5 Land_plants--Phaseolus_vulgaris-PhaVulg1_0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Land_plants/Prunus_persica-Prupe1_0/GCA_000346465.1_Prupe1_0_protein.PFam32-A.tab domains.txt 0 1e-5 Land_plants--Prunus_persica-Prupe1_0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Amphiamblys_sp._WSBS2006-ASM187567v1/GCA_001875675.1_ASM187567v1_protein.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Amphiamblys_sp._WSBS2006-ASM187567v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Anncaliia_algerae_PRA339-USDA_JJB_V2/GCA_000385875.2_Annc_alge_insect_USDA_JJB_V2_protein.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Anncaliia_algerae_PRA339-USDA_JJB_V2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Edhazardia_aedis_USNM_41457-Edha_aedis_V4b/GCA_000230595.3_Edha_aedis_V4b_protein.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Edhazardia_aedis_USNM_41457-Edha_aedis_V4b.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Encephalitozoon_cuniculi_GB-M1-ASM9122v1/GCA_000091225.1_ASM9122v1_genomic.fixed.ORF.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Encephalitozoon_cuniculi_GB-M1-ASM9122v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Encephalitozoon_hellem_ATCC_50504-ASM27781v3/GCA_000277815.3_ASM27781v3_genomic.fixed.ORF.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Encephalitozoon_hellem_ATCC_50504-ASM27781v3.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Encephalitozoon_intestinalis_ATCC_50506-ASM14646v1/GCA_000146465.1_ASM14646v1_genomic.fixed.ORF.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Encephalitozoon_intestinalis_ATCC_50506-ASM14646v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Encephalitozoon_romaleae_SJ-2008-ASM28003v2/GCA_000280035.2_ASM28003v2_genomic.fixed.ORF.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Encephalitozoon_romaleae_SJ-2008-ASM28003v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Microsporidia_sp._UGP3/GCA_000760515.1_UGP1.0_genomic.ORF.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Microsporidia_sp._UGP3.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Mitosporidium_daphniae-UGP1.0/GCF_000760515.1_UGP1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Mitosporidium_daphniae-UGP1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Nematocida_parisii_ERTm1_V3/GCA_000250985.1_Nema_parisii_ERTm1_V3_genomic.ORF.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Nematocida_parisii_ERTm1_V3.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Nematocida_sp._1_ERTm6/GCA_000738915.1_Nema_sp_1_ERTm6_V2_genomic.ORF.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Nematocida_sp._1_ERTm6.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Nosema_apis_BRL_01-NapisBRLv01/GCA_000447185.1_NapisBRLv01_genomic.ORF.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Nosema_apis_BRL_01-NapisBRLv01.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Nosema_apis_BRL_01-NapisBRLv01/GCA_000447185.1_NapisBRLv01_protein.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Nosema_apis_BRL_01-NapisBRLv01.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Nosema_bombycis_CQ1-NosBomCQ1_v1.0/GCA_000383075.1_NosBomCQ1_v1.0_genomic.ORF.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Nosema_bombycis_CQ1-NosBomCQ1_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Nosema_bombycis_CQ1-NosBomCQ1_v1.0/GCA_000383075.1_NosBomCQ1_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Nosema_bombycis_CQ1-NosBomCQ1_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Nosema_ceranae_BRL01-ASM18298v1/GCA_000182985.1_ASM18298v1_genomic.ORF.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Nosema_ceranae_BRL01-ASM18298v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Ordospora_colligata_OC4-ASM80326v1/GCA_000803265.1_ASM80326v1_protein.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Ordospora_colligata_OC4-ASM80326v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Pseudoloma_neurophilia-ASM143216v1/GCA_001432165.1_ASM143216v1_protein.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Pseudoloma_neurophilia-ASM143216v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Spraguea_lophii_42_110-Sprlop1.0/GCA_000430065.1_Sprlop1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Spraguea_lophii_42_110-Sprlop1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Trachipleistophora_hominis-ASM31613v1/GCA_000316135.1_ASM31613v1_genomic.ORF.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Trachipleistophora_hominis-ASM31613v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Vavraia_culicis_floridensis_V1/GCA_000192795.1_Vavr_culi_floridensis_V1_genomic.ORF.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Vavraia_culicis_floridensis_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Microsporidia/Vittaforma_corneae_ATCC_50505_V1/GCA_000231115.1_Vitt_corn_V1_genomic.ORF.PFam32-A.tab domains.txt 0 1e-5 Microsporidia--Vittaforma_corneae_ATCC_50505_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Mycetozoa/Acytostelium_subglobosum-LB1-Asub_2.0/GCA_000787575.2_Asub_2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Mycetozoa--Acytostelium_subglobosum-LB1-Asub_2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Mycetozoa/Cavenderia_fasciculata-DFas_2.0/GCA_000203815.1_DFas_2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Mycetozoa--Cavenderia_fasciculata-DFas_2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Mycetozoa/Dictyostelium_discoideum/Dictyostelium_discoideum.dictybase.01.20.fixed.ORF.PFam32-A.tab domains.txt 0 1e-5 Mycetozoa--Dictyostelium_discoideum.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Mycetozoa/Dictyostelium_fasciculatum-DFas_2.0/GCA_000203815.1_DFas_2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Mycetozoa--Dictyostelium_fasciculatum-DFas_2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Mycetozoa/Dictyostelium_lacteum-ASM160615v1/GCA_001606155.1_ASM160615v1_protein.PFam32-A.tab domains.txt 0 1e-5 Mycetozoa--Dictyostelium_lacteum-ASM160615v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Mycetozoa/Dictyostelium_purpureum-v1.0/GCA_000190715.1_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Mycetozoa--Dictyostelium_purpureum-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Mycetozoa/Planoprotostelium_fungivorum-ASM302417v1/GCA_003024175.1_ASM302417v1_protein.PFam32-A.tab domains.txt 0 1e-5 Mycetozoa--Planoprotostelium_fungivorum-ASM302417v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Mycetozoa/Polysphondylium_pallidum_PN500-PolPal_Dec2009/GCA_000004825.1_PolPal_Dec2009_protein.PFam32-A.tab domains.txt 0 1e-5 Mycetozoa--Polysphondylium_pallidum_PN500-PolPal_Dec2009.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Mycetozoa/Tieghemostelium_lacteum-ASM160615v1/GCA_001606155.1_ASM160615v1_protein.PFam32-A.tab domains.txt 0 1e-5 Mycetozoa--Tieghemostelium_lacteum-ASM160615v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Nucleariida/Fonticula_alba_atcc_38817_v2/fonticula_alba_atcc_38817_mito__v2__2_transcripts.ORF.PFam32-A.tab domains.txt 0 1e-5 Nucleariida--Fonticula_alba_atcc_38817_v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Nucleariida/Fonticula_alba_atcc_38817_v2/fonticula_alba_atcc_38817__v2__2_transcripts.ORF.PFam32-A.tab domains.txt 0 1e-5 Nucleariida--Fonticula_alba_atcc_38817_v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/nucleomorphs/Lotharella_oceanica-ASM69843v2/GCA_000698435.2_ASM69843v2_protein.PFam32-A.tab domains.txt 0 1e-5 nucleomorphs--Lotharella_oceanica-ASM69843v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Oomycete/Achlya_hypogyna-ACH_lane_v1/GCA_002081595.1_ACH_lane_v1_protein.PFam32-A.tab domains.txt 0 1e-5 Oomycete--Achlya_hypogyna-ACH_lane_v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Oomycete/Aphanomyces_astaci-Apha_asta_APO3_V1/GCA_000520075.1_Apha_asta_APO3_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Oomycete--Aphanomyces_astaci-Apha_asta_APO3_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Oomycete/Aphanomyces_invadans-Apha_inva_NJM9701_V1/GCA_000520115.1_Apha_inva_NJM9701_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Oomycete--Aphanomyces_invadans-Apha_inva_NJM9701_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Oomycete/Nothophytophthora_sp._Chile5-PfChile5v2.0/GCA_001712635.2_PfChile5v2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Oomycete--Nothophytophthora_sp._Chile5-PfChile5v2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Oomycete/Phytophthora_megakarya-ASM221536v1/GCA_002215365.1_ASM221536v1_protein.PFam32-A.tab domains.txt 0 1e-5 Oomycete--Phytophthora_megakarya-ASM221536v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Oomycete/Phytophthora_palmivora_var._palmivora-ASM291172v1/GCA_002911725.1_ASM291172v1_protein.PFam32-A.tab domains.txt 0 1e-5 Oomycete--Phytophthora_palmivora_var._palmivora-ASM291172v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Oomycete/Plasmopara_halstedii-GCA_900000015.1/GCA_900000015.1_Plasmopara_halstedii_genome_protein.PFam32-A.tab domains.txt 0 1e-5 Oomycete--Plasmopara_halstedii-GCA_900000015.1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Oomycete/Saprolegnia_diclina_VS20-Sap_diclina_VS20_V1/GCA_000281045.1_Sap_diclina_VS20_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Oomycete--Saprolegnia_diclina_VS20-Sap_diclina_VS20_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Oomycete/Saprolegnia_parasitica_CBS_223.65-ASM15154v2/GCA_000151545.2_ASM15154v2_protein.PFam32-A.tab domains.txt 0 1e-5 Oomycete--Saprolegnia_parasitica_CBS_223.65-ASM15154v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Oomycete/Thraustotheca_clavata-Thrcla_v1/GCA_002081575.1_Thrcla_v1_protein.PFam32-A.tab domains.txt 0 1e-5 Oomycete--Thraustotheca_clavata-Thrcla_v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Parabasalia/Trichomonas_vaginalis-ASM282v1/GCA_000002825.1_ASM282v1_protein.PFam32-A.tab domains.txt 0 1e-5 Parabasalia--Trichomonas_vaginalis-ASM282v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Parabasalia/Tritrichomonas_foetus-ASM183968v1/GCA_001839685.1_ASM183968v1_protein.PFam32-A.tab domains.txt 0 1e-5 Parabasalia--Tritrichomonas_foetus-ASM183968v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Pelagophyta/Aureococcus_anophagefferens-v1.0/GCA_000186865.1_v_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Pelagophyta--Aureococcus_anophagefferens-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Perkinsida/Perkinsus_marinus_ATCC_50983-JCVI_PMG_1.0/GCA_000006405.1_JCVI_PMG_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Perkinsida--Perkinsus_marinus_ATCC_50983-JCVI_PMG_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Phaeophyta/Ectocarpus_siliculosus_Ec_32-ASM31002v1/GCA_000310025.1_ASM31002v1_protein.PFam32-A.tab domains.txt 0 1e-5 Phaeophyta--Ectocarpus_siliculosus_Ec_32-ASM31002v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Rhodophyta/Chondrus_crispus-ASM35022v2/GCA_000350225.2_ASM35022v2_protein.PFam32-A.tab domains.txt 0 1e-5 Rhodophyta--Chondrus_crispus-ASM35022v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Rhodophyta/Galdieria_sulphuraria-ASM34128v1/GCA_000341285.1_ASM34128v1_protein.PFam32-A.tab domains.txt 0 1e-5 Rhodophyta--Galdieria_sulphuraria-ASM34128v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Rhodophyta/Gracilariopsis_chorda-GraCho1.0/GCA_003194525.1_GraCho1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Rhodophyta--Gracilariopsis_chorda-GraCho1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Rhodophyta/Porphyra_umbilicalis-P_umbilicalis_v1/GCA_002049455.1_P_umbilicalis_v1_protein.PFam32-A.tab domains.txt 0 1e-5 Rhodophyta--Porphyra_umbilicalis-P_umbilicalis_v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Rozellida/Paramicrosporidium_saccamoebae-KSL3_v6/GCA_002794465.1_KSL3_v6_protein.PFam32-A.tab domains.txt 0 1e-5 Rozellida--Paramicrosporidium_saccamoebae-KSL3_v6.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Stramenopiles/Blastocystis_hominis-ASM15166v1/GCA_000151665.1_ASM15166v1_protein.PFam32-A.tab domains.txt 0 1e-5 Stramenopiles--Blastocystis_hominis-ASM15166v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Stramenopiles/Blastocystis_sp._ATCC_50177_Nand_II-ASM165121v1/GCA_001651215.1_ASM165121v1_protein.PFam32-A.tab domains.txt 0 1e-5 Stramenopiles--Blastocystis_sp._ATCC_50177_Nand_II-ASM165121v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chytridiomycota/Anaeromyces_robustus-S4_v1.0/GCA_002104895.1_Anaeromyces_sp._S4_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Chytridiomycota--Anaeromyces_robustus-S4_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chytridiomycota/Batrachochytrium_dendrobatidis_JAM81-v1.0/GCA_000203795.1_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Chytridiomycota--Batrachochytrium_dendrobatidis_JAM81-v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chytridiomycota/Batrachochytrium_dendrobatidis_JEL423-BD_JEL423/GCA_000149865.1_BD_JEL423_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Chytridiomycota--Batrachochytrium_dendrobatidis_JEL423-BD_JEL423.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chytridiomycota/Batrachochytrium_salamandrivorans-Batr_sala_BS_V1/GCA_002006685.1_Batr_sala_BS_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Chytridiomycota--Batrachochytrium_salamandrivorans-Batr_sala_BS_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chytridiomycota/Blyttiomyces_helicus-Blyhe1/GCA_003614705.1_Blyhe1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Chytridiomycota--Blyttiomyces_helicus-Blyhe1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chytridiomycota/Caulochytrium_protostelioides-Caupr1/GCA_003615045.1_Caupr1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Chytridiomycota--Caulochytrium_protostelioides-Caupr1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chytridiomycota/Caulochytrium_protostelioides-Caupr_SCcomb/GCA_003615035.1_Caupr_SCcomb_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Chytridiomycota--Caulochytrium_protostelioides-Caupr_SCcomb.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chytridiomycota/Gonapodya_prolifera_JEL478-Ganpr1/GCA_001574975.1_Ganpr1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Chytridiomycota--Gonapodya_prolifera_JEL478-Ganpr1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chytridiomycota/Neocallimastix_californiae-Neocallimastix_sp._G1_v1.0/GCA_002104975.1_Neocallimastix_sp._G1_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Chytridiomycota--Neocallimastix_californiae-Neocallimastix_sp._G1_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chytridiomycota/Piromyces_finnis-v3.0/GCA_002104945.1_Piromyces_sp._finnis_v3.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Chytridiomycota--Piromyces_finnis-v3.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chytridiomycota/Piromyces_sp._E2_v1.0-PirspE2_v1.0/GCA_002157105.1_PirspE2_v1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Chytridiomycota--Piromyces_sp._E2_v1.0-PirspE2_v1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chytridiomycota/Rhizoclosmatium_globosum_JEL800-Rhihy1/GCA_002104985.1_Rhihy1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Chytridiomycota--Rhizoclosmatium_globosum_JEL800-Rhihy1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Fungi/Chytridiomycota/Spizellomyces_punctatus_DAOM_BR117-S_punctatus_V1/GCA_000182565.2_S_punctatus_V1_protein.PFam32-A.tab domains.txt 0 1e-5 Fungi--Chytridiomycota--Spizellomyces_punctatus_DAOM_BR117-S_punctatus_V1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Cephalochordata/Branchiostoma_floridae-Version_2/GCA_000003815.1_Version_2_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Cephalochordata--Branchiostoma_floridae-Version_2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chelicerata/Stegodyphus_mimosarum-v1/GCA_000611955.2_Stegodyphus_mimosarum_v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Chelicerata--Stegodyphus_mimosarum-v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Aptenodytes_forsteri-ASM69914v1/GCA_000699145.1_ASM69914v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Chordates--Aptenodytes_forsteri-ASM69914v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Calypte_anna-ASM69908v1/GCA_000699085.1_ASM69908v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Chordates--Calypte_anna-ASM69908v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Chaetura_pelagica-ChaPel_1.0/GCA_000747805.1_ChaPel_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Chordates--Chaetura_pelagica-ChaPel_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Charadrius_vociferus-ASM70802v2/GCA_000708025.2_ASM70802v2_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Chordates--Charadrius_vociferus-ASM70802v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Columba_livia-Cliv_1.0/GCA_000337935.1_Cliv_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Chordates--Columba_livia-Cliv_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Corvus_brachyrhynchos-ASM69197v1/GCA_000691975.1_ASM69197v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Chordates--Corvus_brachyrhynchos-ASM69197v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Cuculus_canorus-ASM70932v1/GCA_000709325.1_ASM70932v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Chordates--Cuculus_canorus-ASM70932v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Egretta_garzetta-ASM68718v1/GCA_000687185.1_ASM68718v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Chordates--Egretta_garzetta-ASM68718v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Manacus_vitellinus-ASM69201v2/GCA_000692015.2_ASM69201v2_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Chordates--Manacus_vitellinus-ASM69201v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Nipponia_nippon-ASM70822v1/GCA_000708225.1_ASM70822v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Chordates--Nipponia_nippon-ASM70822v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Picoides_pubescens-ASM69900v1/GCA_000699005.1_ASM69900v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Chordates--Picoides_pubescens-ASM69900v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Pygoscelis_adeliae-ASM69910v1/GCA_000699105.1_ASM69910v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Chordates--Pygoscelis_adeliae-ASM69910v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Struthio_camelus-ASM69896v1/GCA_000698965.1_ASM69896v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Chordates--Struthio_camelus-ASM69896v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Chordates/Tinamus_guttatus-ASM70537v2/GCA_000705375.2_ASM70537v2_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Chordates--Tinamus_guttatus-ASM70537v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Cnidaria/Aiptasia_pallida-1.1/GCA_001417965.1_Aiptasia_genome_1.1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Cnidaria--Aiptasia_pallida-1.1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Cnidaria/Pocillopora_damicornis-ASM370409v1/GCA_003704095.1_ASM370409v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Cnidaria--Pocillopora_damicornis-ASM370409v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Cnidaria/Stylophora_pistillata-v1/GCA_002571385.1_Stylophora_pistillata_v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Cnidaria--Stylophora_pistillata-v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Crustacea/Daphnia_magna-daphmag2.4/GCA_001632505.1_daphmag2.4_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Crustacea--Daphnia_magna-daphmag2.4.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Dicyemida/Intoshia_linei-IntLin1.0/GCA_001642005.1_IntLin1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Dicyemida--Intoshia_linei-IntLin1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Echinodermata/Apostichopus_japonicus-ASM275485v1/GCA_002754855.1_ASM275485v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Echinodermata--Apostichopus_japonicus-ASM275485v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Hemichordata/Saccoglossus_kowalevskii-Skow_1.1/GCF_000003605.2_Skow_1.1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Hemichordata--Saccoglossus_kowalevskii-Skow_1.1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Camponotus_floridanus-CamFlo_1.0/GCF_000147175.1_CamFlo_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Insects--Camponotus_floridanus-CamFlo_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Insects/Harpegnathos_saltator-HarSal_1.0/GCF_000147195.1_HarSal_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Insects--Harpegnathos_saltator-HarSal_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mollusca/Elysia_chlorotica-ElyChl2.0/GCA_003991915.1_ElyChl2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Mollusca--Elysia_chlorotica-ElyChl2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mollusca/Mizuhopecten_yessoensis-ASM211388v2/GCA_002113885.2_ASM211388v2_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Mollusca--Mizuhopecten_yessoensis-ASM211388v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mollusca/Mytilus_galloprovincialis-ASM167691v1/GCA_001676915.1_ASM167691v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Mollusca--Mytilus_galloprovincialis-ASM167691v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mollusca/Octopus_bimaculoides-v2_0/GCA_001194135.1_Octopus_bimaculoides_v2_0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Mollusca--Octopus_bimaculoides-v2_0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Mollusca/Pomacea_canaliculata-ASM307304v1/GCA_003073045.1_ASM307304v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Mollusca--Pomacea_canaliculata-ASM307304v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Myxozoa/Enteromyxum_leei-ASM145529v2/GCA_001455295.2_ASM145529v2_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Myxozoa--Enteromyxum_leei-ASM145529v2.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Myxozoa/Thelohanellus_kitauei-ASM82789v1/GCA_000827895.1_ASM82789v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Myxozoa--Thelohanellus_kitauei-ASM82789v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Acanthocheilonema_viteae-ASM90053725v1/GCA_900537255.1_ASM90053725v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Acanthocheilonema_viteae-ASM90053725v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Ancylostoma_caninum-A_caninum_9.3.2.ec.cg.pg/GCA_003336725.1_A_caninum_9.3.2.ec.cg.pg_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Ancylostoma_caninum-A_caninum_9.3.2.ec.cg.pg.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Ancylostoma_duodenale-A_duodenale_2.2.ec.cg.pg/GCA_000816745.1_A_duodenale_2.2.ec.cg.pg_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Ancylostoma_duodenale-A_duodenale_2.2.ec.cg.pg.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Anisakis_simplex-A_simplex_0011_upd/GCA_900617985.1_A_simplex_0011_upd_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Anisakis_simplex-A_simplex_0011_upd.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Caenorhabditis_latens-CaeLat1.0/GCA_002259235.1_CaeLat1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Caenorhabditis_latens-CaeLat1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Caenorhabditis_nigoni-nigoni.pc_2016.07.14/GCA_002742825.1_nigoni.pc_2016.07.14_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Caenorhabditis_nigoni-nigoni.pc_2016.07.14.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Cylicostephanus_goldi-C_goldi_Cheshire_0011/GCA_900617965.1_C_goldi_Cheshire_0011_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Cylicostephanus_goldi-C_goldi_Cheshire_0011.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Dictyocaulus_viviparus-D_viviparus_9.2.1.ec.pg/GCA_000816705.1_D_viviparus_9.2.1.ec.pg_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Dictyocaulus_viviparus-D_viviparus_9.2.1.ec.pg.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Diploscapter_pachys-DipSp1Ass11Ann3/GCA_002287525.1_DipSp1Ass11Ann3_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Diploscapter_pachys-DipSp1Ass11Ann3.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Gongylonema_pulchrum-G_pulchrum_Hokkaido_0011_upd/GCA_900617915.1_G_pulchrum_Hokkaido_0011_upd_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Gongylonema_pulchrum-G_pulchrum_Hokkaido_0011_upd.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Haemonchus_contortus-HCON/GCA_000469685.1_HCON_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Haemonchus_contortus-HCON.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Litomosoides_sigmodontis-ASM90053727v1/GCA_900537275.1_ASM90053727v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Litomosoides_sigmodontis-ASM90053727v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Necator_americanus-N_americanus_v1/GCA_000507365.1_N_americanus_v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Necator_americanus-N_americanus_v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Oesophagostomum_dentatum-O_dentatum_10.0.ec.cg.pg/GCA_000797555.1_O_dentatum_10.0.ec.cg.pg_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Oesophagostomum_dentatum-O_dentatum_10.0.ec.cg.pg.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Onchocerca_flexuosa-O_flexuosa_1.0.allpaths.pg.lrna/GCA_002249935.1_O_flexuosa_1.0.allpaths.pg.lrna_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Onchocerca_flexuosa-O_flexuosa_1.0.allpaths.pg.lrna.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Soboliphyme_baturini-S_baturini_Dall_Island_0011_upd/GCA_900618415.1_S_baturini_Dall_Island_0011_upd_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Soboliphyme_baturini-S_baturini_Dall_Island_0011_upd.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Strongyloides_ratti-S_ratti_ED321/GCA_001040885.1_S_ratti_ED321_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Strongyloides_ratti-S_ratti_ED321.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Strongylus_vulgaris-S_vulgaris_Kentucky_0011_upd/GCA_900624965.1_S_vulgaris_Kentucky_0011_upd_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Strongylus_vulgaris-S_vulgaris_Kentucky_0011_upd.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Teladorsagia_circumcincta-T_circumcincta.14.0.ec.cg.pg/GCA_002352805.1_T_circumcincta.14.0.ec.cg.pg_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Teladorsagia_circumcincta-T_circumcincta.14.0.ec.cg.pg.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Toxocara_canis-r1.0/GCA_000803305.1_Toxocara_canis_adult_r1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Toxocara_canis-r1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Trichinella_britovi-T3_ISS120_r1.0/GCA_001447585.1_T3_ISS120_r1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Trichinella_britovi-T3_ISS120_r1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Trichinella_nativa-T2_ISS10_r1.0/GCA_001447565.1_T2_ISS10_r1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Trichinella_nativa-T2_ISS10_r1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Trichinella_nelsoni-T7_ISS37_r1.0/GCA_001447455.1_T7_ISS37_r1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Trichinella_nelsoni-T7_ISS37_r1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Trichinella_papuae-T10_ISS1980_r1.0/GCA_001447755.1_T10_ISS1980_r1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Trichinella_papuae-T10_ISS1980_r1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Trichinella_patagoniensis-T12_ISS2496_r1.0/GCA_001447655.1_T12_ISS2496_r1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Trichinella_patagoniensis-T12_ISS2496_r1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Trichinella_pseudospiralis-T4_ISS176_r1.0/GCA_001447645.1_T4_ISS176_r1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Trichinella_pseudospiralis-T4_ISS176_r1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Trichinella_sp._T6-T6_ISS34_r1.0/GCA_001447435.1_T6_ISS34_r1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Trichinella_sp._T6-T6_ISS34_r1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Trichinella_sp._T8-T8_ISS272_r1.0/GCA_001447745.1_T8_ISS272_r1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Trichinella_sp._T8-T8_ISS272_r1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Trichinella_sp._T9-T9_ISS409_r1.0/GCA_001447505.1_T9_ISS409_r1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Trichinella_sp._T9-T9_ISS409_r1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Trichinella_zimbabwensis-T11_ISS1029_r1.0/GCA_001447665.1_T11_ISS1029_r1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Trichinella_zimbabwensis-T11_ISS1029_r1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Trichuris_suis-T_suis_1.0.allpaths/GCA_000797535.1_T_suis_1.0.allpaths_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Trichuris_suis-T_suis_1.0.allpaths.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Nematods/Trichuris_trichiura-TTRE2.1/GCA_000613005.1_TTRE2.1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Nematods--Trichuris_trichiura-TTRE2.1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Orthonectida/Intoshia_linei-IntLin1.0/GCA_001642005.1_IntLin1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Orthonectida--Intoshia_linei-IntLin1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Placozoa/Trichoplax_sp._H2-TrispH2_1.0/GCA_003344405.1_TrispH2_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Placozoa--Trichoplax_sp._H2-TrispH2_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Clonorchis_sinensis-ASM360417v1/GCA_003604175.1_ASM360417v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Clonorchis_sinensis-ASM360417v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Clonorchis_sinensis-C_sinensis-2.0/GCA_000236345.1_C_sinensis-2.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Clonorchis_sinensis-C_sinensis-2.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Dibothriocephalus_latus-D_latum_Geneva_0011_upd/GCA_900617775.1_D_latum_Geneva_0011_upd_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Dibothriocephalus_latus-D_latum_Geneva_0011_upd.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Echinococcus_granulosus-ASM52419v1/GCA_000524195.1_ASM52419v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Echinococcus_granulosus-ASM52419v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Echinococcus_multilocularis-EMULTI002/GCA_000469725.3_EMULTI002_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Echinococcus_multilocularis-EMULTI002.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Echinostoma_caproni-E_caproni_Egypt_0011_upd/GCA_900618425.1_E_caproni_Egypt_0011_upd_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Echinostoma_caproni-E_caproni_Egypt_0011_upd.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Hydatigera_taeniaeformis-H_taeniaeformis_Canary_Islands_0011_upd/GCA_900622495.1_H_taeniaeformis_Canary_Islands_0011_upd_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Hydatigera_taeniaeformis-H_taeniaeformis_Canary_Islands_0011_upd.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Hymenolepis_diminuta-H_diminuta_Denmark_0011_upd/GCA_900618445.1_H_diminuta_Denmark_0011_upd_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Hymenolepis_diminuta-H_diminuta_Denmark_0011_upd.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Hymenolepis_microstoma-HMIC002/GCA_000469805.2_HMIC002_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Hymenolepis_microstoma-HMIC002.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Hymenolepis_nana-H_nana_Japan_0011_upd/GCA_900617975.1_H_nana_Japan_0011_upd_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Hymenolepis_nana-H_nana_Japan_0011_upd.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Macrostomum_lignano-Mlig_3_7/GCA_002269645.1_Mlig_3_7_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Macrostomum_lignano-Mlig_3_7.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Mesocestoides_corti-M_corti_Specht_Voge_0011_upd/GCA_900604375.1_M_corti_Specht_Voge_0011_upd_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Mesocestoides_corti-M_corti_Specht_Voge_0011_upd.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Opisthorchis_viverrini-OpiViv1.0/GCA_000715545.1_OpiViv1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Opisthorchis_viverrini-OpiViv1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Schistocephalus_solidus-S_solidus_NST_G2_0011_upd/GCA_900618435.1_S_solidus_NST_G2_0011_upd_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Schistocephalus_solidus-S_solidus_NST_G2_0011_upd.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Schistosoma_curassoni-S_curassoni_Dakar_0011_upd/GCA_900618015.1_S_curassoni_Dakar_0011_upd_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Schistosoma_curassoni-S_curassoni_Dakar_0011_upd.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Schistosoma_haematobium-SchHae_1.0/GCA_000699445.1_SchHae_1.0_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Schistosoma_haematobium-SchHae_1.0.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Schistosoma_margrebowiei-S_margrebowiei_Zambia_0011_upd/GCA_900618395.1_S_margrebowiei_Zambia_0011_upd_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Schistosoma_margrebowiei-S_margrebowiei_Zambia_0011_upd.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Schistosoma_mattheei-S_mattheei_Denwood_0011_upd/GCA_900617995.1_S_mattheei_Denwood_0011_upd_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Schistosoma_mattheei-S_mattheei_Denwood_0011_upd.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Taenia_asiatica-T_asiatica_South_Korea_0011_upd/GCA_900618005.1_T_asiatica_South_Korea_0011_upd_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Taenia_asiatica-T_asiatica_South_Korea_0011_upd.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Taenia_saginata-TSAYD01_v1/GCA_001693075.1_Taenia_saginata_TSAYD01_v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Taenia_saginata-TSAYD01_v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Plathelminthes/Trichobilharzia_regenti-T_regenti_v1_0_4_001_upd/GCA_900618515.1_T_regenti_v1_0_4_001_upd_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Plathelminthes--Trichobilharzia_regenti-T_regenti_v1_0_4_001_upd.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Porifera/Oscarella_carmela-OCAR_WGA_120614/OCAR_G-PEP_120614.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Porifera--Oscarella_carmela-OCAR_WGA_120614.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Rotifera/Brachionus_plicatilis-HYR1/GCA_003710015.1_Brachionus_plicatilis_HYR1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Rotifera--Brachionus_plicatilis-HYR1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Tardigrada/Hypsibius_dujardini-nHd_3.1/GCA_002082055.1_nHd_3.1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Tardigrada--Hypsibius_dujardini-nHd_3.1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Tunicata/Oikopleura_dioica-ASM20953v1/GCA_000209535.1_ASM20953v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Tunicata--Oikopleura_dioica-ASM20953v1.PFam32-A.ZNF_domain_counts
python /oak/stanford/groups/akundaje/marinovg/code/assembly/DomanCountsPerGeneDistribution.py /oak/stanford/groups/akundaje/marinovg/genomes/Metazoa/Tunicata/Oikopleura_dioica-ASM20955v1/GCA_000209555.1_ASM20955v1_protein.PFam32-A.tab domains.txt 0 1e-5 Metazoa--Tunicata--Oikopleura_dioica-ASM20955v1.PFam32-A.ZNF_domain_counts